Edcs1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Edcs1 (Endometrial carcinoma susceptibility QTL1) Rattus norvegicus

Symbol: Edcs1
Name: Endometrial carcinoma susceptibility QTL1
RGD ID: 1600394
Previously known as: Ecs1
Trait: uterus morphology trait   (VT:0001120)    
Measurement Type: percentage of study population developing endometrioid carcinoma during a period of time   (CMO:0001759)    
LOD Score: 2.9
P Value: 0.04
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81112,823,152 - 57,823,152RGD_MAPPER_PIPELINE
mRatBN7.21118,976,208 - 24,697,116RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01119,016,272 - 25,069,932RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01122,660,494 - 28,704,954RGDRnor5.0
RGSC_v3.41119,445,919 - 24,982,397RGDRGSC3.4
RGSC_v3.11119,445,919 - 24,982,397RGD
Cross Type: intercross
Strains Crossed: BDII/Ztm SPRD/Ztm 
JBrowse: View Region in Genome Browser (JBrowse)



Candidate Gene Status
App is a candidate Gene for Edcs1
Ets2 is a candidate Gene for Edcs1

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BDII/Ztm  (IEA)
SPRD/Ztm  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic analysis of susceptibility to endometrial adenocarcinoma in the BDII rat model. Roshani L, etal., Cancer Genet Cytogenet. 2005 Apr 15;158(2):137-41.
2. Genetic identification of multiple susceptibility genes involved in the development of endometrial carcinoma in a rat model. Roshani L, etal., Int J Cancer. 2001 Dec 15;94(6):795-9.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41216714LOC1200930615.8S ribosomal RNA111349658313496735Rat
1584979Arl13bARF like GTPase 13B111359753813663681Rat
1597703Stx19syntaxin 19111361943613624634Rat
620971Pros1protein S111367631013757858Rat
1584978Slc22a7-ps1solute carrier family 22 (organic anion transporter), member 7, pseudogene 1111379851013800178Rat
41064937LOC120095789U2 spliceosomal RNA111389159413891757Rat
402185654LOC134481127uncharacterized LOC134481127111447260014477318Rat
6494940Npm1-ps21nucleophosmin 1, pseudogene 21111452309514523842Rat
41141637LOC120095801U4 spliceosomal RNA111458488114584941Rat
68389Epha3Eph receptor A3111458504114920721Rat
41323621LOC120095722U7 small nuclear RNA111499825914998321Rat
41065123LOC120095723U7 small nuclear RNA111499840314998464Rat
1562102Csnk2a2ipcasein kinase 2 subunit alpha' interacting protein111557405415700131Rat
41113800LOC120095814U6 spliceosomal RNA111560683015606933Rat
401994401LOC134480942uncharacterized LOC134480942111569995715719945Rat
1586142Atp5mg-ps6ATP synthase membrane subunit g, pseudogene 6111588699115887427Rat
1359320C11h3orf38similar to human chromosome 3 open reading frame 38111593050415935152Rat
1308321Zfp654zinc finger protein 654111594742516011957Rat
1308129Cggbp1CGG triplet repeat binding protein 1111601225116019388Rat
1584835Polr2e-ps1RNA polymerase II, I and III subunit E, pseudogene 1111602039916021463Rat
71083Htr1f5-hydroxytryptamine receptor 1F111608926616090665Rat
41063307LOC120095588uncharacterized LOC120095588111610826916274320Rat
41287359LOC120095746small nucleolar RNA SNORA17111625040216250534Rat
41157583LOC120095754small nucleolar RNA SNORA17111633584616335976Rat
2320754Gmnn-ps1geminin, pseudogene 1111637208316372800Rat
402010097LOC134480943uncharacterized LOC134480943111640591916426910Rat
402463712LOC134480945uncharacterized LOC134480945111674538516764015Rat
3367Pou1f1POU class 1 homeobox 1111676331216781295Rat
1306781Chmp2bcharged multivesicular body protein 2B111678397116810500Rat
402126042LOC134480944uncharacterized LOC134480944111682198116833450Rat
1583675Hdac1-ps4Histone deacetylase 1, pseudogene 4111688380916891135Rat
1597045Septin7-ps4septin 7, pseudogene 4111689930316900779Rat
1561853Kmt5al3lysine methyltransferase 5A like 3111692504416927264Rat
1560030Vgll3vestigial-like family member 3111708948417136501Rat
41345038LOC120095589uncharacterized LOC120095589111710722217112358Rat
11383083Vdac1l1voltage-dependent anion channel 1 like 1111746638417485908Rat
41074576LOC120095711U6 spliceosomal RNA111751830317518407Rat
6493479Cbx2-ps1chromobox 2, pseudogene 1111754507117546593Rat
402262690LOC134480946uncharacterized LOC134480946111759135117594928Rat
402118562LOC134480947uncharacterized LOC134480947111789013017891720Rat
1598077Snrpc-ps5small nuclear ribonucleoprotein polypeptide C, pseudogene 5111798698517987863Rat
1305678Cadm2cell adhesion molecule 2111799485618971895Rat
41254584Eif4e-ps7eukaryotic translation initiation factor 4E, pseudogene 7111878661918912976Rat
1595502Haus8l2HAUS augmin-like complex, subunit 8 like 2111907490519077014Rat
2319897Rsrc1-ps2arginine and serine rich coiled-coil 1, pseudogene 2111910647619108198Rat
41049956LOC120095556uncharacterized LOC120095556111970795019728396Rat
2319758Mycbp-ps2Myc binding protein, pseudogene 2111992096219921288Rat
41035149LOC120095765small nucleolar RNA SNORA17111996566219965791Rat
402313149LOC134481128uncharacterized LOC134481128112018235220256129Rat
1586140Eef1akmt4-ps2EEF1A lysine methyltransferase 4, pseudogene 2112024407520244856Rat
41293460LOC120095740small nucleolar RNA SNORA48112026514220265285Rat
402052812LOC134481129uncharacterized LOC134481129112052687920531777Rat
402122389LOC134480948uncharacterized LOC134480948112074711420749138Rat
1596982Chac2-ps2ChaC glutathione specific gamma-glutamylcyclotransferase 2, pseudogene 2112104059121041388Rat
2319543C2h4orf46-ps1similar to human chromosome 4 open reading frame 46, pseudogene 1112127795321278811Rat
41201721Tra2a-ps2transformer 2 alpha, pseudogene 2112152079921560051Rat
1583717Arl2-ps2ADP-ribosylation factor-like 2, pseudogene 2112181344521814140Rat
41370750LOC120095779small nucleolar RNA U13112196117921961281Rat
1586206Poglut2-ps1protein O-glucosyltransferase 2, pseudogene 1112199525521997249Rat
1586207Set-ps11Set nuclear proto-oncogene, pseudogene 11112202401322024835Rat
41053307LOC120095794U2 spliceosomal RNA112211463222114708Rat
2319158Eif4e-ps10eukaryotic translation initiation factor 4E, pseudogene 10112214618722146843Rat
1309968Gbe11,4-alpha-glucan branching enzyme 1112218119422446640Rat
41332035LOC120095590uncharacterized LOC120095590112231645522323644Rat
7669742LOC102549549uncharacterized LOC102549549112233616822351614Rat
7527339LOC102550021uncharacterized LOC102550021112253615022676268Rat
41100346Snord22small nucleolar RNA, C/D box 22112254420322544327Rat
7708718LOC102549956uncharacterized LOC102549956112256473022569578Rat
1592954Chmp6-ps1charged multivesicular body protein 6, pseudogene 1112325665723257424Rat
40983549LOC120095811U6 spliceosomal RNA112329085423290960Rat
402399039LOC134480949uncharacterized LOC134480949112383984123887413Rat
61941Robo1roundabout guidance receptor 1112406786925108694Rat
11406618LOC108352379uncharacterized LOC108352379112454752324564370Rat
7696444LOC102551469uncharacterized LOC102551469112458572624623736Rat
41174631Trnav-aac31transfer RNA valine (anticodon AAC) 31112511170825111789Rat
41281293LOC120095557uncharacterized LOC120095557112513706225177126Rat
41394409LOC120095755small nucleolar RNA SNORA17112524301425243143Rat
41140540LOC120095742small nucleolar RNA SNORA48112532629825326429Rat
402100396LOC134480950igE-binding protein-like112568023825686423Rat
620167Robo2roundabout guidance receptor 2112601591927583750Rat
402286898LOC134480951uncharacterized LOC134480951112657335626593476Rat
41205137LOC120095537uncharacterized LOC120095537112659351926598255Rat
41303579LOC120095760small nucleolar RNA SNORA17112671274026712867Rat
402357979LOC134480952uncharacterized LOC134480952112697895726979873Rat
40981328Trnaa-agc31transfer RNA alanine (anticodon AGC) 31112703987227039943Rat
1589452Tent5b-ps1terminal nucleotidyltransferase 5B, pseudogene 1112721232027214297Rat
1310162Lipilipase I112767635427716025Rat
40969584LOC120095819U6 spliceosomal RNA112768261827682723Rat
1305195Rbm11RNA binding motif protein 11112772187027731125Rat
2319676Snrpe-ps3small nuclear ribonucleoprotein polypeptide E, pseudogene 3112785006327850619Rat
41327136LOC120095809U6 spliceosomal RNA112785717627857282Rat
3775Hspa13heat shock protein family A (Hsp70) member 13112786271727876898Rat
620926Samsn1SAM domain, SH3 domain and nuclear localization signals, 1112797156528021944Rat
402131778LOC134480953uncharacterized LOC134480953112807940628093194Rat
40982247LOC120095592uncharacterized LOC120095592112811285228298906Rat
41044926LOC120095752small nucleolar RNA SNORA17112824323828243369Rat
11381419LOC108352292uncharacterized LOC108352292112829866028316514Rat
1311850Nrip1nuclear receptor interacting protein 1112838283528466483Rat
40959210LOC120095593uncharacterized LOC120095593112848684528498338Rat
40937056Rpl7-ps9ribosomal protein L7, pseudogene 9112883873128841212Rat
7613925LOC102556241uncharacterized LOC102556241112885860628867065Rat
7690081LOC102548078uncharacterized LOC102548078112903014029047704Rat
40997737LOC120095594uncharacterized LOC120095594112908295829088750Rat
1309003Usp25ubiquitin specific peptidase 25112908828329198323Rat
402382056LOC134481049uncharacterized LOC134481049112925114529324925Rat
9119122LOC103693508uncharacterized LOC103693508112929579029785839Rat
402066714LOC134481048uncharacterized LOC134481048112939453629399942Rat
41187853LOC120095539uncharacterized LOC120095539112955076929556142Rat
2325580Mir99amicroRNA 99a112968739229687472Rat
2325435Mirlet7c1microRNA let-7c-1112968811229688205Rat
4888572Mir3588microRNA 3588112973256329732668Rat
2325575Mir125b2microRNA 125b-2112973257229732659Rat
1586139Sord-ps2sorbitol dehydrogenase, pseudogene 2112987923929880660Rat
11369037LOC108352294uncharacterized LOC108352294112990000629912585Rat
402163042LOC134481130uncharacterized LOC134481130112992377829925357Rat
41319938LOC120095805U6 spliceosomal RNA113014202030142126Rat
7521170LOC102546782uncharacterized LOC102546782113031333130317980Rat
40966767LOC120095757small nucleolar RNA SNORA17113040669130406829Rat
41087675LOC120095595uncharacterized LOC120095595113041577730426441Rat
619794CxadrCXADR, Ig-like cell adhesion molecule113046977830516990Rat
402454034LOC134481050uncharacterized LOC134481050113049620430497385Rat
2226Btg3BTG anti-proliferation factor 3113051706830532981Rat
41011570LOC120095596uncharacterized LOC120095596113059079130600743Rat
1563888C11h21orf91similar to human chromosome 21 open reading frame 91113071603430749292Rat
40952789LOC120095597uncharacterized LOC120095597113091138530997796Rat
1597043Hspa8-ps31heat shock protein family A (Hsp70) member 8, pseudogene 31113095357230955649Rat
1309885Chodlchondrolectin113114103031163342Rat
1311046Tmprss15transmembrane serine protease 15113116463331289143Rat
1585829Rpl27l3ribosomal protein L27 like 3113145695331457307Rat
1333570Or5b129-ps1olfactory receptor family 5 subfamily B member 129, pseudogene 1113150092531501832Rat
41156026LOC12009558440S ribosomal protein S18-like113195918231960641Rat
9135017LOC10369351040S ribosomal protein S6 pseudogene113223515132235779Rat
41256742LOC120095558uncharacterized LOC120095558113224775932255863Rat
41129591LOC120095753small nucleolar RNA SNORA17113236579332365917Rat
41203619LOC120095598uncharacterized LOC120095598113236643432367354Rat
41115113LOC120095718U6 spliceosomal RNA113306523733065334Rat
1597984Pcbp2-ps8poly(rC) binding protein 2, pseudogene 8113318080533184093Rat
402381524LOC134480954uncharacterized LOC134480954113319738733204173Rat
1303131Ncam2neural cell adhesion molecule 2113359174834078788Rat
402324830LOC134480955eukaryotic translation elongation factor 1 epsilon-1-like113397274733997231Rat
6499722Tmem258-ps5transmembrane protein 258, pseudogene 5113408960634089830Rat
402226144LOC134480956uncharacterized LOC134480956113428758834293588Rat
1586138Pes1-ps1pescadillo ribosomal biogenesis factor 1, pseudogene 1113501709435019383Rat
402317444LOC134480957uncharacterized LOC134480957113515286335162697Rat
1583562LOC681129triosephosphate isomerase 1 pseudogene113553235035533262Rat
7499203LOC102551587uncharacterized LOC102551587113557716035621188Rat
1583549Rpl32-ps15ribosomal protein L32, pseudogene 15113578161935782006Rat
402436478LOC134480958uncharacterized LOC134480958113594142335946967Rat
41054117LOC120095600uncharacterized LOC120095600113595342836042646Rat
1587389Eno1-ps22enolase 1, pseudogene 22113602552336027683Rat
11400799LOC108352387H/ACA ribonucleoprotein complex subunit 3 pseudogene113606048736060898Rat
402444577LOC134480959protein NYNRIN-like113612280936124988Rat
41257749LOC120095802U4 spliceosomal RNA113636053136360684Rat
402219811LOC134481044protein LLP homolog113656593436566289Rat
402301122LOC134480960uncharacterized LOC134480960113673049536758617Rat
402148610LOC134480961uncharacterized LOC134480961113698553837008795Rat
40969201LOC120095601uncharacterized LOC120095601113706566237094124Rat
41401168LOC120095602uncharacterized LOC120095602113711112237125579Rat
2324553Tmem126a-ps3transmembrane protein 126A, pseudogene 3113715453737157602Rat
10045371Mir155hgMir155 host gene113725992837262157Rat
7489038Mir155microRNA 155113726111437261178Rat
1591507Mrpl39mitochondrial ribosomal protein L39113726611637281612Rat
41165047LOC120095730small nucleolar RNA SNORA70113728382437283916Rat
1561692Jam2junctional adhesion molecule 2113731628737366517Rat
621376Atp5pfATP synthase peripheral stalk subunit F6113736804537375721Rat
1310802GabpaGA binding protein transcription factor subunit alpha113737504037404060Rat
2139Appamyloid beta precursor protein113750620737724351Rat
401978317LOC134480962uncharacterized LOC134480962113759394937595796Rat
1359578Cyyr1cysteine and tyrosine rich 1113804400338150391Rat
41061186LOC120095815U6 spliceosomal RNA113815573938155845Rat
1598007Naca-ps1nascent polypeptide associated complex subunit alpha, pseudogene 1113820471738205411Rat
621241Adamts1ADAM metallopeptidase with thrombospondin type 1 motif, 1113841856538427384Rat
735196Adamts5ADAM metallopeptidase with thrombospondin type 1 motif, 5113848694538533516Rat
7712322LOC102552725uncharacterized LOC102552725113853622438544749Rat
41397046LOC120095790U2 spliceosomal RNA113907094139071022Rat
7630190LOC102552813uncharacterized LOC102552813113909453639117782Rat
1586208Paics-ps8phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 8113915737939159025Rat
41011007Bnip3-ps6BCL2 interacting protein 3, pseudogene 6113916880639169995Rat
41265339LOC120095764small nucleolar RNA SNORA17113951773639517864Rat
1597041Ns5atp4-ps2NS5A transactivated protein 4, pseudogene 2113964860639649375Rat
402037661LOC134480963uncharacterized LOC134480963113964990739654242Rat
402228050LOC134480964tricarboxylate transport protein, mitochondrial-like113972115739723851Rat
402192603LOC134480965uncharacterized LOC134480965113984898839894656Rat
41273276LOC120095559uncharacterized LOC120095559113997357639979712Rat
2324078Atp1b3-ps2ATPase Na+/K+ transporting subunit beta 3, pseudogene 2113998370739984813Rat
41169747Srsf3-ps7serine and arginine rich splicing factor 3, pseudogene 7114004414340044631Rat
1311843N6amt1N-6 adenine-specific DNA methyltransferase 1114007101740083463Rat
1311238Ltn1listerin E3 ubiquitin protein ligase 1114009016940147159Rat
1305062Rwdd2bRWD domain containing 2B114015213940166328Rat
1307192Usp16ubiquitin specific peptidase 16114016665140196792Rat
1305452Cct8chaperonin containing TCP1 subunit 8114019661940208328Rat
41212102LOC120095748small nucleolar RNA SNORA17114023854840238683Rat
41053188Rpl32-ps14ribosomal protein L32, pseudogene 14114024869340249895Rat
9180291LOC103693536developmental pluripotency-associated protein 5A pseudogene114027093740271295Rat
1359474Map3k7clMAP3K7 C-terminal like114027683940321848Rat
6490462Pbdc1-ps3polysaccharide biosynthesis domain containing 1, pseudogene 3114034489540348778Rat
7698912LOC102555219uncharacterized LOC102555219114035695940376071Rat
402441075LOC134480966uncharacterized LOC134480966114039774940422750Rat
7749511LOC102554346uncharacterized LOC102554346114042252240425683Rat
1306693Bach1BTB domain and CNC homolog 1114042572140461118Rat
41246429Ndufa7-ps1NADH:ubiquinone oxidoreductase subunit A7, pseudogene 1114043228740433651Rat
41235348LOC120095766small nucleolar RNA SNORA17114049332440493441Rat
2732Grik1glutamate ionotropic receptor kainate type subunit 1114065597441056966Rat
7624393LOC102549158sorting nexin-1-like114089900540900744Rat
11450786LOC108352301uncharacterized LOC108352301114093368541092846Rat
1307462Cldn17claudin 17114131367541314851Rat
1586137Kansl2-ps1KAT8 regulatory NSL complex subunit 2, pseudogene 1114132627341328610Rat
1308575Cldn8claudin 8114136208141364330Rat
2320810Krtap24-1keratin associated protein 24-1114141823941420789Rat
6488151LOC100912272keratin-associated protein 26-1-like114143373241434777Rat
1589096Krtap26-1keratin associated protein 26-1114145125541451948Rat
11409068LOC108352303uncharacterized LOC108352303114146297941498559Rat
2320648Krtap27-1keratin associated protein 27-1114146716041468354Rat
402385098LOC134480967protein tyrosine phosphatase type IVA 1-like114150707141507803Rat
2324754Krtap13-1l1keratin associated protein 13-1 like 1114150992541510698Rat
2323555Krtap13-1keratin associated protein 13-1114152941641530888Rat
2323404LOC100363236keratin associated protein 13-like114155474941555520Rat
2323353Krtap13keratin associated protein 13114156105341561595Rat
1311682Krtap14lkeratin associated protein 14 like114157194541572732Rat
1559597Krtap13-2keratin associated protein 13-2114157589741577041Rat
9425151LOC103693537keratin-associated protein 13-1-like114159860241599201Rat
1562771Krtap13-2l1keratin associated protein 13-2 like 1114160784141608645Rat
1564302Krtap14keratin associated protein 14114161287641613718Rat
1311088Krtap15-1keratin associated protein 15-1114161656141617385Rat
1583716Rps20-ps4ribosomal protein S20, pseudogene 4114164655641647001Rat
7590870LOC102550973keratin-associated protein 19-4-like114166914441669401Rat
1595144Krtap19-5keratin associated protein 19-5114167783441678034Rat
1588263Krtap16-5keratin associated protein 16-5114173543041736014Rat
7616512LOC102550708keratin-associated protein 19-3-like114174904341749305Rat
7729737Krtap20-1keratin associated protein 20-1114184465341844811Rat
7595009Krtap20-2l1keratin associated protein 20-2-like 1114184994241850121Rat
7637203LOC102551003keratin-associated protein 20-2-like114186307641863222Rat
7505083LOC102551105keratin-associated protein 20-2-like114186920441869368Rat
7558711LOC102551168keratin-associated protein 20-2-like114187799941878193Rat
41369743LOC120095791U2 spliceosomal RNA114187940541879555Rat
7588271LOC102551201keratin-associated protein 20-2-like114188579641885975Rat
7607006LOC102551304keratin-associated protein 20-2-like114189253141892716Rat
7742893LOC102551406keratin-associated protein 20-2-like114189853541898717Rat
7748348LOC102551497keratin-associated protein 20-2-like114190539641905551Rat
402278408LOC134481131keratin-associated protein 20-2-like114191070341910873Rat
2323841Krtap20-2l2keratin associated protein 20-2-like 2114191629641916436Rat
7665279LOC102551679keratin-associated protein 20-2-like114192383341924012Rat
7700217LOC102551771keratin-associated protein 20-2-like114192829941928475Rat
7727214LOC102551852keratin-associated protein 20-2-like114193386941934042Rat
7547632LOC102551947keratin-associated protein 20-2-like114194450041945064Rat
7735531LOC102552046keratin-associated protein 20-2-like114194910241949642Rat
7613053LOC102552137keratin-associated protein 20-2-like114195952341960026Rat
41166462LOC120095562keratin-associated protein 20-2-like114196199541962453Rat
7688666LOC102552244keratin-associated protein 20-2-like114196771541968087Rat
41389793LOC120095563keratin-associated protein 20-2-like114200525242005410Rat
9102091Krtap21-1lkeratin-associated protein 21-1-like114210307142113463Rat
11381215LOC108352304uncharacterized LOC108352304114212675542426793Rat
2323315Krtap8-1keratin associated protein 8-1114220400642204563Rat
1560879Krtap7-1keratin associated protein 7-1114222659442227230Rat
2323257Krtap11-1keratin associated protein 11-1114229614742297151Rat
1592576Morf4l1-ps8mortality factor 4 like 1, pseudogene 8114238824242389916Rat
1307455Tiam1TIAM Rac1 associated GEF 1114251752742866280Rat
402016932LOC134481052uncharacterized LOC134481052114258629642588042Rat
402301967LOC134481051uncharacterized LOC134481051114259386642597586Rat
7687075LOC102552925uncharacterized LOC102552925114283292142839719Rat
402341480LOC134480968uncharacterized LOC134480968114287635642880716Rat
3731Sod1superoxide dismutase 1114294274242948399Rat
727896Scaf4SR-related CTD-associated factor 4114295125443007293Rat
41353378LOC120095710U6 spliceosomal RNA114301364643013748Rat
11414184Cebpzos-ps1CEBPZ opposite strand, pseudogene 1114301645043016678Rat
402393737LOC134480969uncharacterized LOC134480969114301723243056666Rat
402327431LOC134480970uncharacterized LOC134480970114305662843059797Rat
41277807LOC120095607uncharacterized LOC120095607114306387143065404Rat
402451138LOC134480971uncharacterized LOC134480971114306681743068657Rat
402412414LOC134480972uncharacterized LOC134480972114307159543105471Rat
1565091Hunkhormonally upregulated Neu-associated kinase114312724443244502Rat
9389452LOC103693516uncharacterized LOC103693516114339318643398673Rat
41324871LOC120095608uncharacterized LOC120095608114340991243416493Rat
1310778Mis18aMIS18 kinetochore protein A114345412943467157Rat
1310648Mrapmelanocortin 2 receptor accessory protein114347738243489118Rat
1304621Urb1URB1 ribosome biogenesis homolog114349063343551398Rat
1307569Eva1ceva-1 homolog C114357561343649677Rat
402184359LOC134481053uncharacterized LOC134481053114357584943587221Rat
41031335LOC120095736small nucleolar RNA SNORA2/SNORA34 family114366751143667643Rat
1306954Cfap298cilia and flagella associated protein 298114366799643678049Rat
69434Synj1synaptojanin 1114367870943755526Rat
1584739Paxbp1PAX3 and PAX7 binding protein 1114375811643787624Rat
1562726Epcipexosomal polycystin 1 interacting protein114379392443811388Rat
7532083LOC102554018uncharacterized LOC102554018114383691943842564Rat
11363569LOC108352305uncharacterized LOC108352305114385680743863409Rat
40971770LOC120095612uncharacterized LOC120095612114392560943938485Rat
402457087LOC134481054uncharacterized LOC134481054114394066743945635Rat
1307098Olig2oligodendrocyte transcription factor 2114396158543964961Rat
621129Olig1oligodendrocyte transcription factor 1114400045044002592Rat
41116111LOC120095614uncharacterized LOC120095614114404942144054185Rat
402359365LOC134481055uncharacterized LOC134481055114406799644072401Rat
41380760LOC120095615uncharacterized LOC120095615114409614044100503Rat
1583177Ifnar2interferon alpha and beta receptor subunit 2114409957444131941Rat
1560373Il10rbinterleukin 10 receptor subunit beta114413247144154062Rat
41210253LOC120095617uncharacterized LOC120095617114415776144163815Rat
41273260LOC120095616uncharacterized LOC120095616114416825344208869Rat
7675061LOC102554317uncharacterized LOC102554317114416961244180939Rat
1305399Ifnar1interferon alpha and beta receptor subunit 1114421176944238206Rat
402237804LOC134481056small ribosomal subunit protein eS7-like114423882544245035Rat
402335137LOC134481058uncharacterized LOC134481058114426489944280888Rat
1307532Ifngr2interferon gamma receptor 2114426570344283975Rat
1307561Tmem50btransmembrane protein 50B114429080544323650Rat
1309013SonSON DNA and RNA binding protein114433681844409127Rat
1359589Dnajc28DnaJ heat shock protein family (Hsp40) member C28114434152844344348Rat
1308717Gartphosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase114435184144377086Rat
1306823DonsonDNA replication fork stabilization factor DONSON114440579444419099Rat
1310219Cryzl1crystallin zeta like 1114441909944464366Rat
2935Itsn1intersectin 1114446451544646598Rat
402338350LOC134481057uncharacterized LOC134481057114450488644516138Rat
621379Atp5poATP synthase peripheral stalk subunit OSCP114465117144657483Rat
41283450LOC120095621uncharacterized LOC120095621114469238944694979Rat
41356493LOC120095620uncharacterized LOC120095620114469501944703622Rat
2322928Mrps6mitochondrial ribosomal protein S6114477866744834420Rat
621530Slc5a3solute carrier family 5 member 3114479978744802233Rat
9394128LOC103693540uncharacterized LOC103693540114486745144881686Rat
41107969LOC120095786U2 spliceosomal RNA114487730944877488Rat
7555402LOC102548079uncharacterized LOC102548079114494211744982454Rat
621383Kcne2potassium voltage-gated channel subfamily E regulatory subunit 2114500346845015942Rat
2299853Smim11small integral membrane protein 11114501926945028926Rat
1560327C11h21orf140similar to human chromosome 21 open reading frame 140114503561345038181Rat
11445134Smim34small integral membrane protein 34114504305945044349Rat
2956Kcne1potassium voltage-gated channel subfamily E regulatory subunit 1114506687545080024Rat
11442325LOC108352307uncharacterized LOC108352307114506849445070045Rat
631338Rcan1regulator of calcineurin 1114510812345188065Rat
402258802LOC134480974uncharacterized LOC134480974114514050745187629Rat
727938Clic6chloride intracellular channel 6114522371545266261Rat
41063304LOC120095806U6 spliceosomal RNA114528344545283551Rat
402192325LOC134480975uncharacterized LOC134480975114528407345294417Rat
2283Runx1RUNX family transcription factor 1114532577845560300Rat
402418844LOC134480976uncharacterized LOC134480976114562974945651681Rat
7605601LOC102548550uncharacterized LOC102548550114565609045664104Rat
402294020LOC134481132uncharacterized LOC134481132114601869346020843Rat
7601414LOC102549086uncharacterized LOC102549086114609940446109290Rat
402235528LOC134480977uncharacterized LOC134480977114610940446120554Rat
2325478Mir802microRNA 802114611236246112457Rat
1562683RGD1562683RGD1562683114628872146303352Rat
619899Setd4SET domain containing 4114631534046344024Rat
41227328LOC120095803U4 spliceosomal RNA114633189746332049Rat
2286Cbr1carbonyl reductase 1114634640546348815Rat
1583715Trub2-ps1TruB pseudouridine synthase family member 2, pseudogene 1114635772446358978Rat
41210949Cbr1l1carbonyl reductase 1 like 1114636259546365018Rat
6502456Trub2-ps3TruB pseudouridine synthase family member 2, pseudogene 3114637380246375056Rat
7631561Cbr1l2carbonyl reductase 1 like 2114637847446381104Rat
41127113Trub2-ps6TruB pseudouridine synthase family member 2, pseudogene 6114643558046436519Rat
2321756Cbr1l3carbonyl reductase 1 like 3114645539246461863Rat
1309728Cbr3carbonyl reductase 3114647829546486555Rat
1306097Dop1bDOP1 leucine zipper like protein B114649405846595601Rat
1306466Ifitm3-ps2interferon induced transmembrane protein 3, pseudogene 2114660681446607230Rat
1307924Morc3MORC family CW-type zinc finger 3114662157546664315Rat
1307634Chaf1bchromatin assembly factor 1 subunit B114667056046690739Rat
1309165Cldn14claudin 14114670194046799049Rat
41114239LOC120095564uncharacterized LOC120095564114686254546868726Rat
7542458LOC102546699uncharacterized LOC102546699114687793046883751Rat
1308016Sim2SIM bHLH transcription factor 2114688385946923305Rat
1565360Hlcsholocarboxylase synthetase114692549147123111Rat
402059909LOC134481059uncharacterized LOC134481059114694224446988687Rat
11459335LOC108352309small nuclear ribonucleoprotein F-like114700325947003552Rat
1308788Ripply3ripply transcriptional repressor 3114711814747126244Rat
1307205Pigpphosphatidylinositol glycan anchor biosynthesis, class P114715260147158766Rat
1308654Ttc3tetratricopeptide repeat domain 3114715876647258612Rat
41081753LOC120095762U1 spliceosomal RNA114721884347219006Rat
1306879Vps26cVPS26 endosomal protein sorting factor C114728376447311105Rat
402391438LOC134481060large ribosomal subunit protein uL5-like114729680147311475Rat
2528Dyrk1adual specificity tyrosine phosphorylation regulated kinase 1A114736082447479033Rat
40933433LOC120095638uncharacterized LOC120095638114749628147527205Rat
2959Kcnj6potassium inwardly-rectifying channel, subfamily J, member 6114753131247778348Rat
7642969LOC102550239uncharacterized LOC102550239114756130247601821Rat
402293389LOC134481061uncharacterized LOC134481061114758428647596627Rat
41381986LOC120095639uncharacterized LOC120095639114774611547764193Rat
1594265Hsp90ab1-ps22heat shock protein 90 alpha family class B member 1, pseudogene 22114781018647812323Rat
11450454LOC108352313uncharacterized LOC108352313114782517447880446Rat
41166587LOC120095565uncharacterized LOC120095565114795233947957101Rat
7712236LOC102550135uncharacterized LOC102550135114796724948049082Rat
621662Kcnj15potassium inwardly-rectifying channel, subfamily J, member 15114804695348091285Rat
621108ErgETS transcription factor ERG114814814948370472Rat
41068989LOC120095800U4 spliceosomal RNA114834224248342364Rat
41221339LOC120095640uncharacterized LOC120095640114847463948481655Rat
1584977Ets2ETS proto-oncogene 2, transcription factor114849105748507843Rat
9160900LOC103693523uncharacterized LOC103693523114853567748548967Rat
11377006LOC108352314uncharacterized LOC108352314114856218548588001Rat
1305454Psmg1proteasome assembly chaperone 1114874558148755040Rat
1309030Brwd1bromodomain and WD repeat domain containing 1114875617448853692Rat
7489015Mir6324microRNA 6324114880131248801432Rat
402235416LOC134480978large ribosomal subunit protein eL43-like114888283148890849Rat
1307761Hmgn1high mobility group nucleosome binding domain 1114889181348897732Rat
735104Get1guided entry of tail-anchored proteins factor 1114891529848929235Rat
1562512Lca5llebercilin LCA5 like114893012748964613Rat
1563599Sh3bgrSH3 domain binding glutamate-rich protein114897303348997328Rat
1306727B3galt5Beta-1,3-galactosyltransferase 5114905395949100398Rat
7489018Mir6325microRNA 6325114914867249148812Rat
1359642Igsf5immunoglobulin superfamily, member 5114915599049198872Rat
1592358Itgb2l-ps1integrin beta-2-like, pseudogene 1114921118149228300Rat
3271Pcp4Purkinje cell protein 4114922918549331186Rat
619992DscamDS cell adhesion molecule114939138549976861Rat
7740143LOC102551331uncharacterized LOC102551331114966862449702809Rat
41186609Tsnax-ps1translin-associated factor X, pseudogene 1114978704049788131Rat
41158912LOC120095542uncharacterized LOC120095542114981683249833161Rat
41366650LOC120095544uncharacterized LOC120095544114995017049952275Rat
1303241Bace2beta-secretase 2115017685250258948Rat
3127Mx1MX dynamin like GTPase 1115026905650294699Rat
1311662Fam3bFAM3 metabolism regulating signaling molecule B115030092650333296Rat
628821Mx2MX dynamin like GTPase 2115037510150399373Rat
402044551LOC134480979uncharacterized LOC134480979115040259650405709Rat
620766Tmprss2transmembrane serine protease 2115040370750443224Rat
41188497LOC120095741small nucleolar RNA SNORA48115052321550523361Rat
3220Oaz1-ps1ornithine decarboxylase antizyme 1, pseudogene 1115055396350554972Rat
11375877LOC108352390uncharacterized LOC108352390115057859650580806Rat
1311691Ripk4receptor-interacting serine-threonine kinase 4115059192650614169Rat
1310055Prdm15PR/SET domain 15115063397350691624Rat
735112C2cd2C2 calcium-dependent domain containing 2115069468050759096Rat
402122488LOC134480980uncharacterized LOC134480980115073089850752744Rat
40936948Rps17-ps5ribosomal protein S17, pseudogene 5115075924950775117Rat
1310841Zbtb21zinc finger and BTB domain containing 21115078169750796399Rat
1586131Lrrc57-ps2leucine rich repeat containing 57, pseudogene 2115081351850814264Rat
6495041Fignl2-ps1fidgetin-like 2, pseudogene 1115086931450874701Rat
11415410Pdcd7-ps1programmed cell death 7, pseudogene 1115092648450928851Rat
402042487LOC134478909uncharacterized LOC134478909115093071850944416Rat
41156722Nsun3-ps1NOP2/Sun RNA methyltransferase 3, pseudogene 1115093312550944014Rat
2322119Nsun3NOP2/Sun RNA methyltransferase 3115096018751062366Rat
41268022Psrc1-ps1proline and serine rich coiled-coil 1, pseudogene 1115103545051036453Rat
1565472Tmem127l1transmembrane protein 127 like 1115114736351149961Rat
41076501LOC120095714U6 spliceosomal RNA115115214651152255Rat
2320506Eif1a-ps3eukaryotic translation initiation factor 1A, pseudogene 1115130638851364324Rat
1564179Pgk1-ps11phosphoglycerate kinase 1, pseudogene 11115150143351502668Rat
40958082LOC120095759small nucleolar RNA SNORA17115175506751755200Rat
9295737LOC103693547uncharacterized LOC103693547115182382551859471Rat
1583651Pkm-ps15pyruvate kinase M1/2, pseudogene 15115187319651874871Rat
1559516Rps2-ps38ribosomal protein S2, pseudogene 38115189105951891931Rat
402190240LOC134480981uncharacterized LOC134480981115191075251912197Rat
7705653LOC102555459uncharacterized LOC102555459115192487152011472Rat
402219781LOC134480982uncharacterized LOC134480982115217696852300134Rat
1583614Pes1-ps3pescadillo ribosomal biogenesis factor 1, pseudogene 3115224334252244267Rat
402122479LOC134480983uncharacterized LOC134480983115230019452608826Rat
41160895Snord19bsmall nucleolar RNA, C/D box 19B115277437952774449Rat
9071267LOC103693548uncharacterized LOC103693548115279947952838545Rat
41132892LOC120095808U6 spliceosomal RNA115295406952954175Rat
1562187Vta1-ps1vesicle trafficking 1, pseudogene 1115308243953083362Rat
1304614Epha6Eph receptor A6115322678454178120Rat
41272276LOC120095545uncharacterized LOC120095545115323344953246400Rat
7604183Acat2-ps1acetyl-CoA acetyltransferase 2, pseudogene 1115385000153852401Rat
402155099LOC134480984uncharacterized LOC134480984115394808053953194Rat
41385321LOC120095724U7 small nuclear RNA115401590054015958Rat
1305535Arl6ARF like GTPase 6115418027154207136Rat
1305628Crybg3crystallin beta-gamma domain containing 3115421839954330962Rat
708521Riox2ribosomal oxygenase 2115432731154353989Rat
1584981Nlrp4a-ps1NLR family, pyrin domain containing 4A, pseudogene 1115435360254371631Rat
621564Gabrr3gamma-aminobutyric acid type A receptor subunit rho3115437201754424466Rat
402452846LOC134480985uncharacterized LOC134480985115438848854405164Rat
1333369Or5ac25olfactory receptor family 5 subfamily AC member 25115446893654469856Rat
1333619Or5ac24olfactory receptor family 5 subfamily AC member 24115447819254479112Rat
1333309Or5ac23olfactory receptor family 5 subfamily AC member 23115448623554487152Rat
1332924Or5ac23bolfactory receptor family 5 subfamily AC member 23B115450287254503789Rat
1333081Or5ac22olfactory receptor family 5 subfamily AC member 22115452837254529289Rat
1334206Or5ac21olfactory receptor family 5 subfamily AC member 21115454481454545734Rat
1333204Or5ac20-ps1olfactory receptor family 5 subfamily AC member 20, pseudogene 1115458105554581970Rat
1334340Or5h26olfactory receptor family 5 subfamily H member 26115460348854604417Rat
1333449Or5h27olfactory receptor family 5 subfamily H member 27115462057454626346Rat
41029306LOC120095566olfactory receptor 5AC1-like115462972054630640Rat
1334226Or5ac19olfactory receptor family 5 subfamily AC member 19115465348054661674Rat
1333463Olr1537olfactory receptor 1537115468063854681558Rat
1332608Or5h27bolfactory receptor family 5 subfamily H member 27B115470057954701508Rat
1333239Or5h26bolfactory receptor family 5 subfamily H member 26B115471138454712313Rat
1332965Or5k3olfactory receptor family 5 subfamily K member 3115472822854729154Rat
2321335Dppa2l-ps1developmental pluripotency-associated 2 like, pseudogene 1115475919154760285Rat
1334428Or5ac15olfactory receptor family 5 subfamily AC member 15115476549754766417Rat
1332699Or5h25c-ps1olfactory receptor family 5 subfamily H member 25C, pseudogene 1115478597954786903Rat
1333347Or5h25bolfactory receptor family 5 subfamily H member 25B115480231554803238Rat
1334123Or5h25olfactory receptor family 5 subfamily H member 25115482554954826472Rat
1333633Or5h25dolfactory receptor family 5 subfamily H member 25D115483625454837177Rat
1333775Or5h24olfactory receptor family 5 subfamily H member 24115484720354848126Rat
1333231Or5h24bolfactory receptor family 5 subfamily H member 24B115485778854858711Rat
1333850Or5h19-ps1olfactory receptor family 5 subfamily H member 19, pseudogene 1115487427154875201Rat
1333073Or5h18olfactory receptor family 5 subfamily H member 18115487439054893013Rat
1333634Or5bv1-ps1olfactory receptor family 5 subfamily BV member 1, pseudogene 1115489715254897995Rat
1332847Or5h17olfactory receptor family 5 subfamily H member 17115493132954932258Rat
1332676Or5at2-ps1olfactory receptor family 5 subfamily AT member 2, pseudogene 1115495747154958301Rat
1332966Or5h17bolfactory receptor family 5 subfamily H member 17B115496409754965026Rat
1332787Or5at1-ps1olfactory receptor family 5 subfamily AT member 1, pseudogene 1115498031254981433Rat
1332995Or5h17colfactory receptor family 5 subfamily H member 17C115498707254988001Rat
1333626Or5k17olfactory receptor family 5 subfamily K member 17115505799355058946Rat
1333528Or5k16olfactory receptor family 5 subfamily K member 16115506991255070865Rat
1333735Or5k15olfactory receptor family 5 subfamily K member 15115508159755082550Rat
1333804Or5k8olfactory receptor family 5 subfamily K member 8115511337255114301Rat
1333929Or5k14olfactory receptor family 5 subfamily K member 14115513835155139280Rat
1332816Olr1563olfactory receptor 1563115519316155194090Rat
1333068Olr1564olfactory receptor 1564115522550055226426Rat
1588125Or5k1-ps1olfactory receptor family 5 subfamily K member 1, pseudogene 1115529553555296500Rat
41374848LOC120095756small nucleolar RNA SNORA17115531226055312388Rat
1359273Cldnd1claudin domain containing 1115535232155358779Rat
1306639Gpr15G protein-coupled receptor 15115536749655368842Rat
1311817Cpoxcoproporphyrinogen oxidase115540577855415761Rat
1590640Ftdc2ferritin domain containing 2115543798055441566Rat
11424835LOC108352322ferritin heavy chain-like115545641255459513Rat
1303279St3gal6ST3 beta-galactoside alpha-2,3-sialyltransferase 6115553012055590950Rat
11379447LOC108352323uncharacterized LOC108352323115557037855575797Rat
620543Dcbld2discoidin, CUB and LCCL domain containing 2115559469155649113Rat
41319680LOC120095647uncharacterized LOC120095647115559583755615742Rat
1590575Rps28l1ribosomal protein S28 like 1115572369555730261Rat
1589464Mapk3-ps3mitogen activated protein kinase 3, pseudogene 3115582189155833375Rat
1597040Ptma-ps7prothymosin alpha, pseudogene 7115584354955843911Rat
402036596LOC134480986uncharacterized LOC134480986115585142955863337Rat
40945973LOC120095648uncharacterized LOC120095648115596737756002432Rat
41238407LOC120095745small nucleolar RNA SNORA17115613232856132460Rat
1309361Col8a1collagen type VIII alpha 1 chain115624599856378586Rat
1565927Filip1lfilamin A interacting protein 1-like115640346756646422Rat
1309437Cmss1cms1 ribosomal small subunit homolog115640362056701751Rat
402364116LOC134481062uncharacterized LOC134481062115670584456708153Rat
1306090Tmem30ctransmembrane protein 30C115670878856727633Rat
402420669LOC134481063uncharacterized LOC134481063115671382156714302Rat
11393230Rps13-ps3ribosomal protein S13, pseudogene 3115672777856728283Rat
1586130Rpsa-ps2ribosomal protein SA, pseudogene 2115674785756748816Rat
1307925Tbc1d23TBC1 domain family, member 23115677247656830625Rat
41238602Trnaa-agc25transfer RNA alanine (anticodon AGC) 25115678369156783763Rat
11409922LOC108352326ribosome biogenesis protein NSA2 homolog pseudogene115683080456832380Rat
1310494Nit2nitrilase family, member 2115683295756844142Rat
1303049Tomm70translocase of outer mitochondrial membrane 70115684783756886302Rat
11483287LOC108352328uncharacterized LOC108352328115688850056893887Rat
1310935Tmem45a2transmembrane protein 45A2115695217656996145Rat
402338759LOC134481039uncharacterized LOC134481039115696440356975695Rat
7674515Rpl5-ps5ribosomal protein L5, pseudogene 5115699093756991962Rat
2320136Ube2i-ps2ubiquitin-conjugating enzyme E2I, pseudogene 2115709909557125744Rat
2323126Lnp1leukemia NUP98 fusion partner 1115712998657149594Rat
2320082Pdcd6ip-ps1programmed cell death 6 interacting protein, pseudogene115716590057166600Rat
6495353Tmem45atransmembrane protein 45A115718168657268630Rat
41302083Tceal9-ps1transcription elongation factor A like 9, pseudogene 1115719599857196649Rat
9999453Rps27a-ps21ribosomal protein S27a, pseudogene 21115720655457207289Rat
402188950LOC134481064ubiquitin-ribosomal protein eS31 fusion protein-like115720663457207145Rat
1307217Adgrg7adhesion G protein-coupled receptor G7115728290457345417Rat
401997544LOC134481066uncharacterized LOC134481066115733741057355024Rat
1309751Tfgtrafficking from ER to golgi regulator115735460757381071Rat
1562717Abi3bpABI family member 3 binding protein115738128257597989Rat
402009505LOC134481065uncharacterized LOC134481065115752394057529027Rat
1596981Caprin1-ps1cell cycle associated protein 1, pseudogene 1115774455557747291Rat
708358Impg2interphotoreceptor matrix proteoglycan 2115778791457887450Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
33792D11Mit2262114364607643646338Ratregion
33899D11Mit494113532310535323199Ratregion
34003D11Mit3134113976419739764331Ratregion
34150D11Mgh5233115580589255806125Ratregion
36065D11Rat6152115775483757754989Ratregion
35565D11Rat20138112995899629959134Ratregion
36820D11Rat9155115257693252577087Ratregion
36944D11Rat25191114146003641460227Ratregion
37070D11Rat28239112653693626537175Ratregion
37904D11Rat36132114599373245993864Ratregion
34916D11Rat26149114015604440156193Ratregion
34987D11Rat97128114757660747576735Ratregion
35050D11Rat27188112750254427502732Ratregion
35096D11Rat10171115005660050056771Ratregion
35152D11Rat21190113804229438042484Ratregion
35581D11Rat80159112434038824340547Ratregion
35633D11Rat31152112164645621646608Ratregion
35679D11Rat16151114357178443571935Ratregion
35957D11Rat22156112252474622524902Ratregion
38250D11Rat44197114342082043421017Ratregion
40546D11Rat71156115441539154415547Ratregion
40696D11Rat73102114282187942821981Ratregion
38678D11Rat40246112929502829295274Ratregion
40260D11Rat87153111517854715178700Ratregion
39198D11Rat35227114957866649578893Ratregion
39440D11Rat77111113245886232458973Ratregion
41242D11Rat79154112701562027015774Ratregion
41450D11Rat72125114597519145975316Ratregion
42942D11Rat116128113020399330204121Ratregion
42943D11Rat113249112673882926739078Ratregion
42944D11Rat112157112937777729377934Ratregion
42945D11Rat100202113167200931672211Ratregion
42949D11Rat110166114410890544109071Ratregion
42950D11Rat109186115586586855866054Ratregion
40822D11Rat70242115155314851553390Ratregion
40928D11Rat76262114040487840405140Ratregion
41566D11Rat69147115009572450095871Ratregion
41634D11Rat96153115538725955387412Ratregion
41734D11Rat101247112631803126318278Ratregion
44885D11Got30168115494038254940550Ratregion
44889D11Wox10111115540519855405309Ratregion
44890D11Got35191115566071955660910Ratregion
44894D11Got25172114700674147006913Ratregion
44897D11Got28141114621970746219848Ratregion
44909D11Got14124113758336237583486Ratregion
60754D11Wox1419114841358748414006Ratregion
625767D11Got18251113976308939763340Ratregion
59991D11Got21188114360591043606098Ratregion
66440D11Uia4211115109743951097650Ratregion
66626D11Mco3216114125591641256132Ratregion
66627D11Mco4323114709714647097469Ratregion
66632D11Mco6353114769734347697696Ratregion
66635D11Mco7128112685876826858896Ratregion
67238D11Arb9216114783116147831377Ratregion
1631197D11Got136199114396236843962567Ratregion
1632029D11Got113137112536449825364635Ratregion
1632207D11Ulb2197114709723947097436Ratregion
1632385D11Got123195111449617014496365Ratregion
1627743D11Got100195112831952328319718Ratregion
1639788D11Got142258114805974548060003Ratregion
1640254D11Ulb1278114709715947097437Ratregion
1636266D11Got131182114853135748531539Ratregion
7193090D11Wox10111115540519855405309Ratregion
5033911RH140585189114455658244556771Ratregion
5031576AU047867168114039844940398617Ratregion
5034472BF415441114115344602553446139Ratregion
5031928AU046668260113810785538108115Ratregion
5029417UniSTS:234008203115078154650781749Ratregion
5035026Nrip1249112838807728388326Ratregion
5029699AW523365133114400239244002525Ratregion
5055211RH143670199114042610240426301Ratregion
5059914AI072090293114019627040196563Ratregion
5049882RH133736210113736516837365378Ratregion
5054519RH143271140111601302416013164Ratregion
5047594RH132417204114251876242518966Ratregion
5045626RH131285805114668980946690614Ratregion
5048660RH133031222114160830741608529Ratregion
5071976RH135393202114718519247185394Ratregion
5076608RH139274146113071613030716276Ratregion
5076940RH139467180114400234544002525Ratregion
5080166RH141423187114532665545326842Ratregion
5079252RH140852346114465118944651535Ratregion
5080260RH141477183114415384244154025Ratregion
5071634RH135196216115595455855954774Ratregion
5071920RH135361231114448717944487410Ratregion
5066930AU048066257115538719555387452Ratregion
5068652AU047016160113145421331454373Ratregion
5070326AF05306280112838622728386307Ratregion
5089049AU048924184113949238639492570Ratregion
5082117BF409675109114552701345527122Ratregion
5502605RH125538148113750631837506466Ratregion
5504141Sra4-pending809114298049442981303Ratregion
5504187UniSTS:259643808114015492940155737Ratregion
5505508RH66607869115560744255608311Ratregion
5506109UniSTS:49837368111460825314608321Ratregion
5506656ECD01730856114438512544385981Ratregion
5500905REN82086224114373154543731769Ratregion
5501846MARC_15619-15620:1017174255:3839114816816748169006Ratregion
5502583RH12545280111601295316013033Ratregion
10755482rs107338789113294306732943067Ratregion
11528645rs105204296115454128254541282Ratregion
11528646rs1074208840115410798754107987Ratregion
11528647rs198448974115684544956845449Ratregion
Position Markers

Flank 1: (D11Mgh6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21118,976,208 - 18,976,310 (+)MAPPER
Rnor_6.01119,016,272 - 19,016,371NCBI
Rnor_5.01122,660,494 - 22,660,593UniSTS
RGSC_v3.41119,445,919 - 19,446,020RGD
RGSC_v3.41119,445,921 - 19,446,020UniSTS
Celera1118,900,385 - 18,900,484UniSTS
RGSC_v3.11119,445,919 - 19,446,020RGD
RH 3.4 Map1170.7RGD
RH 3.4 Map1170.7UniSTS
RH 2.0 Map11359.6RGD
Cytogenetic Map11 RGD
Peak: (D11Mit4)
Rat AssemblyChrPosition (strand)Source
GRCr81135,323,105 - 35,323,199 (+)Marker Load Pipeline
mRatBN7.21121,836,615 - 21,836,709 (+)MAPPER
Rnor_6.01122,043,056 - 22,043,149NCBI
Rnor_5.01125,682,678 - 25,682,771UniSTS
RGSC_v3.41122,214,112 - 22,214,205UniSTS
RGSC_v3.41122,214,111 - 22,214,205RGD
Celera1121,717,308 - 21,717,401UniSTS
RGSC_v3.11122,214,112 - 22,214,205RGD
RH 3.4 Map5689.6UniSTS
RH 3.4 Map5689.6RGD
Cytogenetic Map11q11UniSTS


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)112252474682951192Rat
1598841Memor7Memory QTL 7exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)113330600878306008Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)114644316891443168Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11381815448818154Rat
1598811Bp291Blood pressure QTL 2911.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113330600878306008Rat
11528648Bss118Bone structure and strength QTL 1186.6582e-07femur strength trait (VT:0010010)femur ultimate displacement (CMO:0002719)115410798756845449Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)111080612555806125Rat
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)113532319955805892Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)112995899657754989Rat
2290451Scl58Serum cholesterol level QTL 583.48blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)112631803155806125Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)113191546976915469Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)113642841681428416Rat
1600394Edcs1Endometrial carcinoma susceptibility QTL12.90.04uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)111282315257823152Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)113461876079618760Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)115441539196071021Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)115775483796071021Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)113674945981749459Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)113674945981749459Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)115107102196071021Rat
631510Spl2Serum phospholipid level QTL 24.1blood phospholipid amount (VT:0006084)serum phospholipid level (CMO:0001171)112755668572556685Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general software package used: Genescan Analysis Software 1599856
qtl_general number of animals used: 36; gender: female 1599856
qtl_general significant association between endometrial carcinoma and BDII allele was observed in backcross animals was detected by transmission disequilibrium test (TDT) 1599853
qtl_general measurement method: animals which developed endometrial tumors before teh age of 700 days were considered positive, animals were subjected to necropsy when tumors were suspected 1599856