Edcs2 QTL Report (Rattus norvegicus) - Rat Genome Database

Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
QTL Registration

QTL: Edcs2 (Endometrial carcinoma susceptibility QTL2) Rattus norvegicus

Symbol: Edcs2
Name: Endometrial carcinoma susceptibility QTL2
RGD ID: 1600391
Previously known as: Ecs2
Trait: uterus morphology trait   (VT:0001120)    
Measurement Type: percentage of study population developing endometrioid carcinoma during a period of time   (CMO:0001759)    
LOD Score: 3.5
P Value: 0.01
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2126,833,190 - 17,870,186RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0128,249,608 - 20,590,080RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01210,334,345 - 32,251,246RGDRnor5.0
RGSC_v3.4127,382,953 - 27,853,771RGDRGSC3.4
RGSC_v3.1127,412,881 - 27,716,957RGD
Cross Type: intercross
Strains Crossed: BN/Han BDII/Ztm 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Epo is a candidate Gene for Edcs2
Muc3 is a candidate Gene for Edcs2

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BDII/Ztm  (IEA)
BN/Han  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic analysis of susceptibility to endometrial adenocarcinoma in the BDII rat model. Roshani L, etal., Cancer Genet Cytogenet. 2005 Apr 15;158(2):137-41.
2. Genetic identification of multiple susceptibility genes involved in the development of endometrial carcinoma in a rat model. Roshani L, etal., Int J Cancer. 2001 Dec 15;94(6):795-9.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3091Bhlha15basic helix-loop-helix family, member a15121042046510424641Rat
68333Gpr12G protein-coupled receptor 121285227098525875Rat
2621Flt1Fms related receptor tyrosine kinase 11272968997468626Rat
61308Flt3Fms related receptor tyrosine kinase 31276236587699474Rat
70883Eif2ak1eukaryotic translation initiation factor 2 alpha kinase 1121071077110744597Rat
62387Pdx1pancreatic and duodenal homeobox 11277578657763064Rat
2155Arpc1bactin related protein 2/3 complex, subunit 1B1294821769495772Rat
3282Pdgfaplatelet derived growth factor subunit A121564554915667056Rat
2187Azgp1alpha-2-glycoprotein 1, zinc-binding121693099016939333Rat
71018Gna12G protein subunit alpha 12121380558013886255Rat
619746Gtf3ageneral transcription factor III A1281367468144690Rat
68390Rpl21ribosomal protein L211282686418272290Rat
71055Grifingalectin-related inter-fiber protein121408017014082892Rat
3222Ocmoncomodulin121053561910596705Rat
69361UncxUNC homeobox121509277915097300Rat
621234Cdx2caudal type homeo box 21277267987733142Rat
727930Gjc3gap junction protein, gamma 3121689984616912309Rat
708472Asmtacetylserotonin O-methyltransferase121630471916309568Rat
628837Actbactin, beta121166311211666697Rat
621418Adap1ArfGAP with dual PH domains 1121532391315376110Rat
621333Stag3STAG3 cohesin complex component121728467717314936Rat
620399Cyth3cytohesin 3121084013710933792Rat
628709Cyp3a18cytochrome P450, family 3, subfamily a, polypeptide 181288805288930382Rat
621103Bud31BUD31 homolog1294628389470387Rat
621558Vamp7vesicle-associated membrane protein 7121672847716764261Rat
621363Gpc2glypican 2121727787517284297Rat
620440Cpsf4cleavage and polyadenylation specific factor 41294297659445582Rat
1303231Rasl11aRAS-like family 11 member A1282581488262576Rat
620442Pdap1PDGFA associated protein 11294706529480880Rat
619845Gper1G protein-coupled estrogen receptor 1121521721715222679Rat
628626Cyp3a23-3a1cytochrome P450, family 3, subfamily a, polypeptide 23-polypeptide 11292561599285020Rat
628633MafkMAF bZIP transcription factor K121483462814856414Rat
620587LfngLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase121403055114038996Rat
708392Cyp3a9cytochrome P450, family 3, subfamily a, polypeptide 9121680622216846428Rat
619755Rac1Rac family small GTPase 1121103702811057251Rat
628728Il3rainterleukin 3 receptor subunit alpha121631808116323781Rat
1305631Cox19cytochrome c oxidase assembly factor COX19121530353515313014Rat
3392Prkar1bprotein kinase cAMP-dependent type I regulatory subunit beta121549223315624942Rat
1305193Cyp2w1cytochrome P450, family 2, subfamily w, polypeptide 1121529155215296421Rat
1305831Pompproteasome maturation protein1271620987174737Rat
1305017Dhrsxdehydrogenase/reductase X-linked121629976816304553Rat
1307594Slc46a3solute carrier family 46, member 31271406107157093Rat
1306702Tmem184atransmembrane protein 184A121481750814833109Rat
1304618Kdelr2KDEL endoplasmic reticulum protein retention receptor 2121113882011157117Rat
1310020Gsx1GS homeobox 11278814607882753Rat
1306410Ccz1CCZ1 homolog, vacuolar protein trafficking and biogenesis associated121060106610624608Rat
1306092Rnf6ring finger protein 61288167778826870Rat
1308908Ints1integrator complex subunit 1121486131214886048Rat
1309549Ttyh3tweety family member 3121399683114025457Rat
1308389Zdhhc4zinc finger DHHC-type palmitoyltransferase 4121123086411244898Rat
621080Nudt1nudix hydrolase 1121430251414309559Rat
1309735Lamtor4late endosomal/lysosomal adaptor, MAPK and MTOR activator 4121725865617262478Rat
1310463Zfp68zinc finger protein 68121602605816040995Rat
1306873Tecpr1tectonin beta-propeller repeat containing 1121039158710420462Rat
1306877Asmtlacetylserotonin O-methyltransferase-like121631533516321607Rat
1310991Zfand2azinc finger AN1-type containing 2A121516160115172679Rat
1561105Gal3st4galactose-3-O-sulfotransferase 4121726796317276951Rat
1311980Fam20cFAM20C, golgi associated secretory pathway kinase121582686415885423Rat
1311349IqceIQ motif containing E121394329013982708Rat
1310193Daglbdiacylglycerol lipase, beta121105973211102170Rat
1311608Taf6TATA-box binding protein associated factor 6121705586417064244Rat
1311647Zfp316zinc finger protein 316121129444511313841Rat
1311660Get4guided entry of tail-anchored proteins factor 4121537700915394238Rat
1560686Sdk1sidekick cell adhesion molecule 1121237807413363934Rat
1306506Mmd2monocyte to macrophage differentiation-associated 2121196273312009776Rat
1305231Usp42ubiquitin specific peptidase 42121080086410840785Rat
1309018Eif3beukaryotic translation initiation factor 3, subunit B121419640314220865Rat
1305446Trraptransformation/transcription domain-associated protein1297380069827708Rat
1305455Trappc14trafficking protein particle complex subunit 14121726274817267093Rat
1309919Cops6COP9 signalosome subunit 6121703897917041818Rat
1305944Mrm2mitochondrial rRNA methyltransferase 2121430955614314759Rat
1307875Micall2MICAL-like 2121489915114927949Rat
1305791Snx8sorting nexin 8121425182914300435Rat
1308214Chst12carbohydrate sulfotransferase 12121411063114129099Rat
1308222Lnx2ligand of numb-protein X 21280052028070494Rat
1307540Tnrc18trinucleotide repeat containing 18121175539211851721Rat
1311314Amz1archaelysin family metallopeptidase 1121388653313924275Rat
1307636Cnpy4canopy FGF signaling regulator 4121706464217070755Rat
1310946Papolbpoly(A) polymerase beta121204427512046621Rat
1309981Zscan21zinc finger and SCAN domain containing 21121699849617024167Rat
708379Cyp3a2cytochrome P450, family 3, subfamily a, polypeptide 21292079869230038Rat
1309158Zfp655zinc finger protein 6551293499859375449Rat
1306932Mblac1metallo-beta-lactamase domain containing 1121707146517072736Rat
1310233Ap4m1adaptor related protein complex 4 subunit mu 1121704976617055954Rat
1309643Foxk1forkhead box K1121211011912175089Rat
1305483Pms2PMS1 homolog 2, mismatch repair system component121067681910701161Rat
1308787Elfn1extracellular leucine-rich repeat and fibronectin type III domain containing 1121466004914725709Rat
1332710Or7a43-ps1olfactory receptor family 7 subfamily A member 43, pseudogene 1121628844616289236Rat
1308452Baiap2l1BAR/IMD domain containing adaptor protein 2 like 1121025043410339937Rat
1309447Nptx2neuronal pentraxin 2121003743510048345Rat
1310545Slc29a4solute carrier family 29 member 4121185354011884660Rat
1308045Usp12ubiquitin specific peptidase 121283098458363686Rat
1308619Zscan25zinc finger and SCAN domain containing 251293273479338206Rat
1309187Bri3brain protein I3121034100710364655Rat
1306155RadilRap associating with DIL domain121202439512088540Rat
1564193Ube2c-ps2ubiquitin-conjugating enzyme E2C, pseudogene 2121266888412669423Rat
1303018Mcm7minichromosome maintenance complex component 7121704220717049470Rat
1561923Fam220afamily with sequence similarity 220, member A121099796911013962Rat
1560288Pum3-ps3pumilio RNA-binding family member 3, pseudogene 3121635713116359221Rat
1562172Spry3sprouty RTK signaling antagonist 3121666318816673124Rat
1566418LOC498154hypothetical protein LOC498154121518572815289042Rat
1562875RbakRB-associated KRAB zinc finger121137531411388937Rat
1563095Zfp853zinc finger protein 853121126612411276492Rat
1566006RGD1566006similar to paired immunoglobin-like type 2 receptor beta121772021317732681Rat
1566028Dnaaf5dynein, axonemal, assembly factor 5121545363615492722Rat
1561143Pilrb2paired immunoglobin like type 2 receptor beta 2121777304717779527Rat
1563248Tmem130transmembrane protein 1301298370559862843Rat
1560787Aimp2aminoacyl tRNA synthetase complex-interacting multifunctional protein 2121070119410710772Rat
1562319RGD1562319similar to family with sequence similarity 55, member C121723831117252723Rat
1560888Cdk8cyclin-dependent kinase 81287371988805026Rat
1310492Grid2ipGrid2 interacting protein121116656711203765Rat
1560731Gpr146G protein-coupled receptor 146121525193615267217Rat
1359506Spnl1sialophorin like 1121613658316147719Rat
1359142Sun1Sad1 and UNC84 domain containing 1121539637815441277Rat
1311175Zkscan5zinc finger with KRAB and SCAN domains 51293845619405763Rat
1561076Spdye4speedy/RINGO cell cycle regulator family member E4121133726211344753Rat
1560616Zkscan1zinc finger with KRAB and SCAN domains 1121696628716987680Rat
1559588RGD1559588similar to cell surface receptor FDFACT121739884417404810Rat
1564022Vom2r63vomeronasal 2 receptor, 63121762514117652806Rat
1311473Ptcd1pentatricopeptide repeat domain 11294456569463508Rat
1559964MGC112692similar to Leukosialin precursor (Leucocyte sialoglycoprotein) (Sialophorin) (CD43) (W3/13 antigen)121612615016131108Rat
1562250LOC498152hypothetical protein LOC498152121512135315142294Rat
628654Zfp394zinc finger protein 3941294090479417228Rat
1311893Rsph10bradial spoke head 10 homolog B121062743410675227Rat
1359435Zfp157zinc finger protein 157121624823016279459Rat
1586393Ankrd61ankyrin repeat domain 61121071890810723267Rat
1584479Ints15integrator complex subunit 15121124504511260170Rat
1566386Znf846zinc finger protein 846121597931216012933Rat
1585866PvrigPVR related immunoglobulin domain containing121736372117365577Rat
1583309Fscn1fascin actin-bundling protein 1121159704211610183Rat
1584948Cbwd1-ps2COBW domain containing 1, pseudogene 2121662616216629000Rat
1584949Rpl18a-ps2ribosomal protein L18A, pseudogene 21276150657616561Rat
1562930Vom2r61vomeronasal 2 receptor, 61121743891117465634Rat
1565135Rnf216ring finger protein 216121145475211576305Rat
1562569Rps8-ps9ribosomal protein S8, pseudogene 9121604777616048497Rat
1562533Mtus2microtubule associated scaffold protein 21267065317078331Rat
1565131RGD1565131similar to ribosomal protein L15121022718110227989Rat
1359154Wipi2WD repeat domain, phosphoinositide interacting 2121191136911939799Rat
1562525RGD1562525similar to cell surface receptor FDFACT121767486017682715Rat
1559954Nxpe5l1neurexophilin and PC-esterase domain family, member 5-like 1121718656617196784Rat
1565146Brat1BRCA1-associated ATM activator 1121392888913951760Rat
1564358Polr1dRNA polymerase I and III subunit D1279705928004157Rat
1564396Zfp12zinc finger protein 12121131697111330498Rat
1564640Akap17aA-kinase anchoring protein 17A121631042716315166Rat
1583820Hsp90aa1-ps8heat shock protein 90 alpha family class A member 1, pseudogene 81289949248997727Rat
1593752Tubb4b-ps2tubulin, beta 4B class IVb, pseudogene 2121661134416612890Rat
1593125Ap5z1adaptor related protein complex 5 subunit zeta 1121209383412109043Rat
1590340LOC684427similar to Histidine triad nucleotide-binding protein 1 (Adenosine 5-monophosphoramidase) (Protein kinase C inhibitor 1) (Protein kinase C-interacting protein 1) (PKCI-1)1286684388668940Rat
1590880Pan3poly(A) specific ribonuclease subunit PAN31274767077595380Rat
1587046LOC680837hypothetical protein LOC680837121715294917153791Rat
1587058LOC680825hypothetical protein LOC680825121712410417142519Rat
1585013Aldoa-ps3aldolase, fructose-bisphosphate A, pseudogene 3121077795210779290Rat
1584808Nip7-ps9nucleolar pre-rRNA processing protein NIP7, pseudogene 9121342089613421417Rat
1588255Nxpe5neurexophilin and PC-esterase domain family, member 5121709762417119700Rat
1596067Atp5mfATP synthase membrane subunit f1294216659428236Rat
1598332Lmtk2lemur tyrosine kinase 2121042677210508750Rat
1596958Fbxl18F-box and leucine-rich repeat protein 18121167453811701317Rat
1591744LOC680456similar to autism susceptibility candidate 2121619607116233257Rat
1595919Cyp3a62cytochrome P450, family 3, subfamily a, polypeptide 62121639799816433833Rat
1595705Cyp3a73cytochrome P450, family 3, subfamily a, polypeptide 731289555938995061Rat
1595709LOC498158hypothetical LOC498158121686689516867939Rat
1595191Uradureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase1277092337718925Rat
1596095LOC690410similar to developmental pluripotency associated 4 isoform 11292861419287341Rat
1596017Rps15al1ribosomal protein S15A-like 11295334659533899Rat
1594738Smurf1SMAD specific E3 ubiquitin protein ligase 11296350099726520Rat
1594158Foxl3forkhead box L3121581217715814534Rat
1596881Mad1l1mitotic arrest deficient 1 like 1121432089214630750Rat
1592807Wasf3WASP family member 31285638058660799Rat
1594749Kpna7karyopherin subunit alpha 71295763789635247Rat
1597309Cyp3a71-pscytochrome P450, family 3, subfamily a, polypeptide 71, pseudogene1291363189151198Rat
620834Arpc1aactin related protein 2/3 complex, subunit 1A1295024969525304Rat
1598199Vom2r-ps104vomeronasal 2 receptor, pseudogene 104121786250917880232Rat
1598200Vom2r62vomeronasal 2 receptor, 62121752466217542226Rat
1598202Spn-ps8sialophorin, pseudogene 8121613127516133558Rat
1598204Spn-ps7sialophorin, pseudogene 7121610570516106765Rat
1592673Mtif3mitochondrial translational initiation factor 31281261938140706Rat
1598146Kif19bkinesin family member 19B121414416314196259Rat
1625997Vom2r-ps98vomeronasal 2 receptor, pseudogene 98121606460616066575Rat
2319950Psmg3proteasome assembly chaperone 3121480923414812347Rat
2319349Spn-ps6sialophorin, pseudogene 6121611083816117345Rat
2319106Rpl31l4ribosomal protein L31-like 4121689311116893551Rat
2322117LOC100360439ribosomal protein L36-like121140837911408767Rat
2322550LOC100360200cleavage and polyadenylation specific factor 4121021174410213512Rat
2323211Card11caspase recruitment domain family, member 11121362097913758115Rat
2325388Mir106bmicroRNA 106b121704334417043425Rat
2325459Mir93microRNA 93121704313517043221Rat
2325466Mir339microRNA 339121527754615277641Rat
2325594Mir25microRNA 25121704293217043015Rat
6489147Zfp113zinc finger protein 3121702210417033776Rat
6499303Spn-ps2sialophorin, pseudogene 2121611083816112028Rat
6499499Spn-ps1sialophorin, pseudogene 1121610035416101498Rat
6497070Spn-ps3sialophorin, pseudogene 3121615474016156686Rat
6497217Zcwpw1l1zinc finger CW-type and PWWP domain containing 1-like 1121779865017812208Rat
6497409Pilrapaired immunoglobin-like type 2 receptor alpha121778716917798149Rat
7505188LOC102554879uncharacterized LOC102554879121079362010800689Rat
7536442LOC10254879440S ribosomal protein S27-like121577683915778793Rat
7519900LOC102546414uncharacterized LOC102546414121484552214848118Rat
7612525LOC102554070uncharacterized LOC102554070121656636616569183Rat
7634033Spdye4-ps1speedy/RINGO cell cycle regulator family member E4, pseudogene 1121135951011373943Rat
7637009LOC102555525uncharacterized LOC102555525121139674711397774Rat
7638517LOC102554669uncharacterized LOC102554669121034904510359627Rat
7641109LOC102554019uncharacterized LOC102554019121642643916479103Rat
7610051LOC102554945uncharacterized LOC102554945121115721411158522Rat
7630468LOC102547586uncharacterized LOC1025475861273648167366809Rat
7598302LOC102547234uncharacterized LOC102547234121354778913607490Rat
7581366Ccdc90b-ps1coiled-coil domain containing 90B, pseudogene 1121690674816908225Rat
7553419LOC102554231paired immunoglobulin-like type 2 receptor alpha-like121782366217828030Rat
7673409LOC102546864uncharacterized LOC102546864121522974315241457Rat
7731748LOC102554825uncharacterized LOC102554825121075688710770859Rat
7675853LOC102551138uncharacterized LOC102551138121717846417200736Rat
7682710LOC102547493uncharacterized LOC102547493121543065715453779Rat
9133748LOC103691050uncharacterized LOC103691050121563246015636507Rat
9074083LOC103691023uncharacterized LOC1036910231290152209042818Rat
9081796Ube2n-ps5ubiquitin-conjugating enzyme E2N, pseudogene 5121030909510314132Rat
9185431LOC103691025elongation factor 1-gamma pseudogene121053646710537604Rat
9205257LOC103691091NHP2-like protein 1 pseudogene121701804017019347Rat
9271212LOC103693627putative olfactory receptor 10AC1121141733211425904Rat
9368177LOC103691088transcription elongation factor B polypeptide 1 pseudogene121698971716991140Rat
9241109LOC103693619uncharacterized LOC103693619121015764810158685Rat
11371602LOC108352419uncharacterized LOC1083524191282166898229202Rat
11466946Vmn2r116l-ps4vomeronasal 2, receptor 116 like, pseudogene 4121758263517615711Rat
11430784LOC10835242160S ribosomal protein L29 pseudogene1292775009278307Rat
11440668LOC108352477U1 small nuclear ribonucleoprotein C pseudogene1295701889570666Rat
11371857LOC108352423uncharacterized LOC108352423121125474711258556Rat
11414185Npm1-ps12nucleophosmin 1, pseudogene 12121513561915136849Rat
11502171LOC108352425uncharacterized LOC108352425121422308014265458Rat
11503703LOC108352424uncharacterized LOC108352424121174731011755112Rat
41378758Fus-ps5FUS RNA binding protein, pseudogene 5121657167116577185Rat
41111819Rpl34-ps3ribosomal protein L34, pseudogene 3121696413416964559Rat
41248887Trnas-aga12transfer RNA serine (anticodon AGA) 121299859469986026Rat
41204650LOC120095834uncharacterized LOC120095834121150554911508629Rat
41250024Trnap-agg80transfer RNA proline (anticodon AGG) 801295309469531026Rat
41141036Lmbr1l-ps1limb development membrane protein 1-like, pseudogene 11283054028306445Rat
41169375LOC12009588960S ribosomal protein L29-like1286316048632206Rat
41251110LOC120095833uncharacterized LOC120095833121070653410708834Rat
41251146LOC120095891uncharacterized LOC1200958911288334888835122Rat
41279517LOC120095888uncharacterized LOC1200958881285436408546160Rat
41384695LOC120095890uncharacterized LOC1200958901286852558704812Rat
41253801LOC120095892uncharacterized LOC120095892121219044212208375Rat
41360313LOC120095884uncharacterized LOC1200958841281100828112776Rat
41208279LOC120095887uncharacterized LOC1200958871284381968439433Rat
41146634LOC120095883uncharacterized LOC1200958831273750657392844Rat
41261087LOC120096082U2 spliceosomal RNA1269766606976752Rat
41188349LOC120095895uncharacterized LOC120095895121414908814152690Rat
41122052Rap1b-ps1RAP1B, member of RAS oncogene family, pseudogene 1121773295517734674Rat
41150475Spn-ps5sialophorin, pseudogene 5121614788516150072Rat
41344340LOC120096117small nucleolar RNA SNORA171278726267872754Rat
41102335Rap1b-ps2RAP1B, member of RAS oncogene family, pseudogene 2121775685017757928Rat
41182922LOC120096093U6 spliceosomal RNA121416998914170094Rat
41070362LOC120095896NXPE family member 3-like121720844017225545Rat
41103769LOC120095886uncharacterized LOC1200958861281891238196982Rat
41127121LOC120095931collagen alpha-1(I) chain-like121080481010821511Rat
41348606LOC120095929uncharacterized LOC1200959291285469118553407Rat
41011142Snord102small nucleolar RNA, C/D box 1021282702758270345Rat
40977068LOC120095898paired immunoglobulin-like type 2 receptor beta121774431517756074Rat
40977332LOC120096103small nucleolar RNA SNORA701298221599822288Rat
40978574Snora27small nucleolar RNA, H/ACA box 271282699058270033Rat
41014784LOC120095894uncharacterized LOC120095894121358920213594498Rat
40982078LOC120096114small nucleolar RNA SNORA51121068966410689796Rat
40932154LOC120096089U4 spliceosomal RNA121023732610237440Rat
40941861LOC120095885uncharacterized LOC1200958851281099548112013Rat
41050335LOC120095836uncharacterized LOC120095836121163259611640692Rat
41079527LOC120095893uncharacterized LOC120095893121343303013460245Rat
41319381LOC120095852uncharacterized LOC1200958521278837557884688Rat
41153330LOC120095930uncharacterized LOC1200959301288433128846055Rat
41297723LOC120095835uncharacterized LOC120095835121160012611602621Rat
41315690Spn-ps4sialophorin, pseudogene 4121609028116097302Rat
41016460Ppp1r14b-ps2protein phosphatase 1, regulatory (inhibitor) subunit 14B, pseudogene121589313815975566Rat
41235499LOC120095837uncharacterized LOC120095837121179749311801221Rat
41041701LOC120095841uncharacterized LOC120095841121697612216995839Rat
41240022LOC120096102U6 spliceosomal RNA121303886713038969Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
33911D12Mit6139121235161912351758Ratregion
33961D12Mit5180121235161912351752Ratregion
33725D12Mit1259121502494215025183Ratregion
36221D12Rat4292121238654912386833Ratregion
37272D12Rat28120121580606515806191Ratregion
37318D12Rat29150121731067817310845Ratregion
37478D12Rat43243121107382511074078Ratregion
35501D12Rat21671293182169318387Ratregion
34801D12Rat3148121181215911812311Ratregion
39886D12Rat65202121144446611444665Ratregion
38052D12Rat37165121037299310373166Ratregion
38094D12Rat47209121507055115070761Ratregion
40408D12Rat91160121587265315872803Ratregion
38952D12Rat401201271967307196840Ratregion
38952D12Rat401201271967307196840Ratregion
39026D12Rat34223121106751711067730Ratregion
39330D12Rat39215121290184612902077Ratregion
41956D12Arb131941268331906833424Ratregion
41960D12Arb21701285254238525593Ratregion
41414D12Rat63166121000902810009200Ratregion
40838D12Rat622171298777889877995Ratregion
40942D12Rat60178121003653010036704Ratregion
41054D12Rat61178121023185410232030Ratregion
43361D1Got180156121109377711093812Ratregion
44055D6Got301181284495168450901Ratregion
44929D12Got41481274199747420119Ratregion
44930D12Got51531268427256842878Ratregion
44933D12Got122581290680279068285Ratregion
44935D12Got1012041295268829527086Ratregion
44936D12Got102031282983078298623Ratregion
44936D12Got102031282984208298623Ratregion
44937D12Got13295121039569510395989Ratregion
44938D12Got111561284494908449646Ratregion
44939D12Got14194121035540310355595Ratregion
44940D12Got15270121080911110809378Ratregion
44941D12Got21274121095792810958202Ratregion
44942D12Got18173121008692310087097Ratregion
44944D12Got17131121098458710984718Ratregion
44947D12Got25127121216883812168962Ratregion
44948D12Got20234121091241010912644Ratregion
44949D12Got24145121221818412218331Ratregion
44950D12Wox5116121363552313635658Ratregion
44951D12Got26220121281017712810397Ratregion
44952D12Got27156121343671213436870Ratregion
44954D12Got29279121392476113925040Ratregion
44956D12Got30158121446396714464125Ratregion
44959D12Got34207121690215316902360Ratregion
44960D12Got35142121709872117098867Ratregion
44962D12Got36139121637919316379328Ratregion
44963D12Got32176121709874417098921Ratregion
60756D12Wox3961294541359454231Ratregion
625806D12Got19133121171290011713033Ratregion
62471D2Uia1271121531710015317367Ratregion
629605D12Hmgc1181121693293516933106Ratregion
1628808D12Got207275121011549810115773Ratregion
1638964D12Got23111121265868012658791Ratregion
1641769D12Wox20121042238110422669Ratregion
1633534D12Wox29101121042600010426267Ratregion
1633534D12Wox29101121042616410426267Ratregion
1635936D12Wox19156121042327310423429Ratregion
7205870PMC85795P4500121166435411665320Ratregion
5035789PMC180915P1362121166505411665416Ratregion
5035831PMC20960P1346121166562111665967Ratregion
5035841PMC224995P1585121166504811665633Ratregion
5035851PMC23951P1565121166510011665665Ratregion
5035853PMC240671P1382121166563211666014Ratregion
5035873PMC26753P1657121166524911665906Ratregion
5035879PMC275467P1254121166506311665317Ratregion
5035905PMC304100P1121121166499811665119Ratregion
5035973PMC340938P1249121166539311665642Ratregion
5036011PMC85361P1357121166505211665409Ratregion
5036027PMC96811P1651121166508711665738Ratregion
5036033PMC98352P1795121166519711665992Ratregion
5036069Actb-rs1288121166566011666072Ratregion
5038900RH127397183121545384115454024Ratregion
5038990RH1274492081271567287156936Ratregion
7206564UniSTS:547070835121185356311854398Ratregion
7206646Uncx762121509328415094046Ratregion
5039162RH1275471891281368298137213Ratregion
5037119RH45568265121241281312413078Ratregion
5035687D16S313101281258208126537Ratregion
5031220PMC102156P1220121166507111665291Ratregion
5031226PMC104029P1452121166619111666643Ratregion
5031232PMC108483P1473121166557711666050Ratregion
5031238PMC109669P1820121166519911666019Ratregion
5031240PMC110672P1517121166512511665642Ratregion
5031252PMC114236P1667121166529311665960Ratregion
5031260PMC117781P1466121166557711666043Ratregion
5031280PMC125345P1473121166557711666050Ratregion
5031304PMC133829P1473121166557711666050Ratregion
5031316PMC136359P1175121166557711665752Ratregion
5031322PMC137548P2899121166454811665447Ratregion
5031324PMC137792P1702121166438111665083Ratregion
5031328PMC139793P1421121166562911666050Ratregion
5031346PMC149351P1862121166454411665406Ratregion
5031356PMC151001P2125121166595611666081Ratregion
5031370PMC152551P1267121166505011665317Ratregion
5031380PMC154439P1528121166510611665634Ratregion
5031428AU048357189121008690710087097Ratregion
5026192RH131271200121062439410624594Ratregion
5031570AU047888216121479276414792980Ratregion
5026280RH1316061901272121397212330Ratregion
5026390RH132022208121680627916806487Ratregion
5028915RH1428052071273736017373808Ratregion
5031774AU047189149121209155412091704Ratregion
5034343SGC345121341274767407476874Ratregion
5034424BE117877193121150419011504383Ratregion
5029191RH143860165121411084014111005Ratregion
5034598AW520453215121211019112110402Ratregion
5034612BF390194163121131316911313332Ratregion
5029397RH144636206121131360311313809Ratregion
5032099RH943981681292559939256161Ratregion
5032177RH1261562431294169879417230Ratregion
5026798RH133571215121200941812009633Ratregion
5032213L26507118121211607912116197Ratregion
5032271AI414930135121402509714025232Ratregion
5032371AW2084181111294823849482495Ratregion
5032497D5Ertd591e213121083945210839665Ratregion
5032611RH1346442141272826167282830Ratregion
5032611RH1346442141272826167282830Ratregion
5027309C87323158121698237116982529Ratregion
5035176BM3910841901294816159481805Ratregion
5035194BQ2009961511293683749368525Ratregion
5030067AW5319541581273887747388932Ratregion
5030119BI2862412151297383599738574Ratregion
5030121BE0987221641270192757019439Ratregion
5030185BF4014831091269090786909187Ratregion
5032921RH1369731901282686968268886Ratregion
5033027RH137324218121125987911260097Ratregion
5025366RH128037199121537784015378039Ratregion
5025384RH128108211121105809911058310Ratregion
5025390RH1281302161295025339502749Ratregion
502792734.MMHAP64FRD10.seq167121783206317832230Ratregion
502796544.MMHAP70FRG11.seq189121313121613131405Ratregion
5033411RH138737247121041921610419463Ratregion
5033433RH1388151271294493279449454Ratregion
5033469RH138948131121131210111312232Ratregion
5030763BF4048081271285693638569490Ratregion
5033535RH1391831781294299879430165Ratregion
5033535RH139183178121021311510213293Ratregion
5031169BE116815180121702291417023094Ratregion
5051833RH946841751277580307758204Ratregion
5052013RH947891691277578677758036Ratregion
5054933RH143509124121131210411312228Ratregion
5056145RH144209101121388348313883584Ratregion
5056215RH144250222121689725716897479Ratregion
5059402BG377917131121078216310782294Ratregion
5057806BI277157205121408246714082860Ratregion
5054773RH1434171571276236557623812Ratregion
5054899RH1434881011274896507489751Ratregion
5054941RH143514267121388870213888969Ratregion
5057914AI5488301361281318478131983Ratregion
5058676BI284461184121483505314835238Ratregion
5056225RH1442552511293226489322899Ratregion
5059550BE097282181121387536513875546Ratregion
5058036BE1018311871288398658840052Ratregion
5052681RH142204196121003741910037615Ratregion
5052767RH142261173121539647415396647Ratregion
5058934BF387279191121115667611156867Ratregion
5052973RH1423811591292855989285757Ratregion
5053011RH1424031581297260809726238Ratregion
5060020BF400282137121642471516424853Ratregion
5058436BE0960921501296535299653679Ratregion
5059158BF387594188121130340211303590Ratregion
5053799RH142857119121073845810738577Ratregion
5052406Pdx13091277582557758564Ratregion
5051028RH134396213121035802610358239Ratregion
5051106RH134443182121003692010037614Ratregion
5050348RH134004190121564244215642632Ratregion
5050418RH134045201121603969416039895Ratregion
5051182RH134487190121099790710998097Ratregion
5051405AI595374154121411065214110806Ratregion
5050558RH134125189121521725315217442Ratregion
5050756RH1342401961276082467608440Ratregion
5051629AI463295130121211037212110502Ratregion
5041634RH128970152121033974910339901Ratregion
5041864RH129103181121726217117262352Ratregion
5044526RH130654157121736540517365562Ratregion
5044918RH130878153121463052714630680Ratregion
5044976RH130912212121190892011909134Ratregion
5045060RH130960182121582687915827061Ratregion
5045500RH131214150121517246215172612Ratregion
5041316RH1287871991294629469464356Ratregion
5045642RH1312951841274682477468432Ratregion
5046324RH131687211121537579615376007Ratregion
5044570RH130679182121539647415396656Ratregion
5046526RH131804181121631043316310614Ratregion
5045990RH131495206121170309811703304Ratregion
5045990RH131495206121170309811703304Ratregion
5047598RH132420208121562464215624850Ratregion
5047648RH132448181121676227916762460Ratregion
5045782RH131376209121429998614300195Ratregion
5045860RH131420212121676377616763988Ratregion
5047798RH1325342121292560299256241Ratregion
5049060RH1332631881294809819481169Ratregion
5049310RH133407186121531262315312809Ratregion
5046776RH131948184121398239313982577Ratregion
5046828RH131978185121525209915252284Ratregion
5049386RH133451216121701325417013470Ratregion
5047332RH1322661971274767827476979Ratregion
5048398RH1328812161280028278003043Ratregion
5039900RH127972197121537703715377234Ratregion
5048556RH1329712141283740858374299Ratregion
5042754RH1296261871294822109482393Ratregion
5039580RH1277871941294823339482659Ratregion
5040348RH128231197121419649614196693Ratregion
5040442RH128286181121157588711576068Ratregion
5043508RH130065196121630434816304544Ratregion
5040018RH128042210121704236017042716Ratregion
5042642RH1295571881294170309417218Ratregion
5041142RH128686150121631792416318074Ratregion
5040418RH128272208121481196614812174Ratregion
5040488RH128312186121388585113886037Ratregion
7193016Actb235121166442211665123Ratregion
5042902RH1297121811276991317699312Ratregion
5041306RH128781189121127624411276433Ratregion
5041498RH128891198121035935210359550Ratregion
5072682RH136991220121483285614833076Ratregion
5074978RH138328140121388657013886710Ratregion
5075028RH138357220121597935815979578Ratregion
5072160RH1366872131270336217033834Ratregion
5075490RH138624150121388883413888984Ratregion
5075242RH138481168121693730316937471Ratregion
5074172RH137863142121508424415084386Ratregion
5076662RH139306121121335155113351672Ratregion
5077384RH139725204121704189017042094Ratregion
5076140RH139002205121698743016987635Ratregion
5077440RH139757198121375786613758064Ratregion
5076678RH139315146121190916111909307Ratregion
5078024RH140098204121209393512094139Ratregion
5079716RH141162186121388277713882963Ratregion
5080012RH141332214121124457111244785Ratregion
5078992RH140671197121071091510711112Ratregion
5078464RH140358187121393744713937634Ratregion
5078538RH140401217121145910111459318Ratregion
5079044RH140702206121488579114885997Ratregion
5079246RH140831220121105733911057559Ratregion
5080442RH1415810121131701911317213Ratregion
5080442RH1415810121131701911317213Ratregion
5073542RH1374961871274670647467251Ratregion
5073004RH137179181121705597317056154Ratregion
5074086RH137813145121045747710457622Ratregion
5071016RH134838214121109686211097076Ratregion
5073434RH137434198121155002111550219Ratregion
5073564RH137509217121147010311470644Ratregion
5073576RH137516149121083586110836783Ratregion
5071728RH135250184121209771112097895Ratregion
5061796AW533576155121726801617268171Ratregion
5065018BF4054852081276924127692620Ratregion
5067182AU047911207121494228014942487Ratregion
5067214AU047892255121479276414793019Ratregion
5070005RH94413881274663757466463Ratregion
5068848AU046888175121668258616682756Ratregion
5069432AU046504164121030087310301037Ratregion
5070191RH94525173121693691216937085Ratregion
5069058AU046750273121193108611931354Ratregion
5065320BE121431161121701953117019692Ratregion
5063916BE120231163121072308110723244Ratregion
5065714BF406262207121589157615891783Ratregion
5065718BF406289115121705720617057321Ratregion
5061998BE112478182121170272211702904Ratregion
5061998BE112478182121170272211702904Ratregion
5063520BE107745162121522979215229954Ratregion
5065274BE121325159121541681815416977Ratregion
5060396AW525445170121564519015645360Ratregion
5060552BE110334150121061401910614169Ratregion
5062218BF397585213121691167316911886Ratregion
5062784AW5344181671274286137428780Ratregion
5065956BE1163121601293264569326615Ratregion
5066092BI2989831601294630749463234Ratregion
5066228PMC122623P1122121166588711666009Ratregion
5066246PMC125678P1549121166454811665097Ratregion
5066268PMC133768P1159121166520511665364Ratregion
5064774BF405084112121276786512767977Ratregion
5066290PMC138011P1646121166536011666006Ratregion
5066300PMC145386P1465121166558211666047Ratregion
5066306PMC150974P1834121166520211666036Ratregion
5066322PMC151804P4104121166508111665185Ratregion
5066338PMC153958P1473121166563911666112Ratregion
5061402BF396334237121327745513277692Ratregion
5063286BI301666185121706271417062900Ratregion
5064860BE108649154121176529511765449Ratregion
5064902BE108699150121624945616249606Ratregion
5086959AI412829156121014995110150107Ratregion
5082051BF409203200121204625412046454Ratregion
5082263BE119075158121064556110645719Ratregion
5087388BM3896811901287444568744646Ratregion
5087454PMC18465P1330121166423011664560Ratregion
5087464PMC19354P1466121166558011666046Ratregion
5087490PMC207566P4237121166412911664366Ratregion
5087508PMC21334P2453121166621611666669Ratregion
5086535AW529990171121643362116433792Ratregion
5087239BE117320150121045963410459784Ratregion
5087907Gsh11491278807897880938Ratregion
5089153AU0489861071299541589954190Ratregion
5089259AU049050147121004160610041753Ratregion
5088579AU048654176121742593117426107Ratregion
5088651AU048696137121039271410392851Ratregion
5089721AU049324182121134469111344871Ratregion
5090463AU049765202121206494112065143Ratregion
5084104AI01303399121081005310810152Ratregion
5090261AU049646126121531128715311413Ratregion
5088139Uncx4.198121509279115092889Ratregion
5082417BE1193481661285716638571829Ratregion
5088539AU0486291431299684169968557Ratregion
5080834RH141809180121690761816907812Ratregion
5085090AW5331631501283653078365458Ratregion
5082587BF416395169121698410416984273Ratregion
5080736RH141752202121067691910677121Ratregion
5080796RH141786207121123570311235910Ratregion
5081016RH141916184121488585914886043Ratregion
5081024RH1419202121280694948069706Ratregion
5084938AI236775145121403057014031271Ratregion
5083053BF3907121551281372228137377Ratregion
5083067BF390734209121079363910793848Ratregion
5083199BF3909751761273877107387886Ratregion
5086449BM386455156121237862412378780Ratregion
5086610AA850383191121211279112112982Ratregion
5081388AI454263194121531086415311058Ratregion
5081633BE117712186121280532612805512Ratregion
5086695BE115283162121356318313563345Ratregion
5085758BM390892215121237843112378646Ratregion
5502619RH1256771631295025989502761Ratregion
5502918Prkar1b751121562410215624853Ratregion
5503196mActb0121166602411666464Ratregion
5503986UniSTS:2571050121483699514837963Ratregion
5504448PMC209527P1500121166435911665325Ratregion
5504464PMC212730P175121166572611665925Ratregion
5504504PMC24644P4243121166423011664560Ratregion
5504658PMC33181P2315121166558211666021Ratregion
5504662PMC33279P1460121166438611665312Ratregion
5504670PMC350549P3154121166447211665092Ratregion
5504314D12S1240E100121773411417734214Ratregion
5504314D12S1240E100121775751717757617Ratregion
5504562PMC30411P1321121166415911664567Ratregion
5504682PMC356969P12330121166447111665267Ratregion
5504758PMC87052P1433121166537911666026Ratregion
5504772PMC97445P1440121166413211665125Ratregion
5505327Papolb321121204477912045100Ratregion
5683878D12Hmgc3194121300829613008490Ratregion
5683880D12Hmgc4170121310437613104548Ratregion
5505466UniSTS:530587421121487436114874782Ratregion
5506041UniSTS:498230476121105937411059850Ratregion
5506797G45501143121010232610102469Ratregion
5507245BB013350871288458828845969Ratregion
5507263aa6586760121166594711666235Ratregion
5500240AI747533103121704270517043542Ratregion
5499615MARC_2660-2661:991933047:1307121773349017733786Ratregion
5499615MARC_2660-2661:991933047:1307121775689317757189Ratregion
5499659MARC_6763-6764:992007406:11251276163287616453Ratregion
5500967PMC102052P1360121166544211666016Ratregion
5500977PMC107891P1514121166434111665321Ratregion
5501001PMC115141P1318121166504711665365Ratregion
5501011PMC117352P1160121166433611664496Ratregion
5501013PMC117780P1465121166516311665718Ratregion
5501091PMC133998P8537121166440311665406Ratregion
5501387Mafk588121483465614835244Ratregion
5499901UniSTS:235351167121411079914110966Ratregion
5499903UniSTS:2353622031293588549359057Ratregion
5499895UniSTS:235349192121539658615396778Ratregion
5499905UniSTS:235357128121125994511260073Ratregion
5502357RH124577138121071048010710618Ratregion
5500535RH135895139121035996310360102Ratregion
5501017PMC122924P2439121166413211665124Ratregion
5500551RH135954170121472489314725063Ratregion
5501273PMC187403P1220121166512111665341Ratregion
5504454PMC21071P1285121166561611666025Ratregion
5504688PMC37512P3250121166507111665321Ratregion
5504730PMC86032P2444121166441411665324Ratregion
5504780PMC99880P2318121166505011665368Ratregion
5504789UniSTS:2741821383121483659514837978Ratregion
5505116LOC783396150121581353015813680Ratregion
5501693LOC345651130121166447011665066Ratregion
5501648UniSTS:26548815561276818907683447Ratregion
5506600Flt101274464277448109Ratregion
5502295RH1243081461288253138825459Ratregion
5502686Tmem184a0121482930314829966Ratregion
5502307RH124339154121698989516990049Ratregion
5502307RH124339154121698989516990049Ratregion
5502898Lmtk21032121042702310428055Ratregion
Position Markers

Flank 1: (D12Mgh4)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01232,251,246 - 32,251,347NCBI
RGSC_v3.41227,853,771 - 27,853,871RGD
RGSC_v3.11227,716,957 - 27,717,403RGD
RH 3.4 Map12446.5UniSTS
RH 3.4 Map12446.5RGD
SHRSP x BN Map1229.5599RGD
SHRSP x BN Map1229.5599UniSTS
Peak: (D12Mit6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21212,351,619 - 12,351,758 (+)MAPPER
Rnor_6.01214,419,775 - 14,419,913NCBI
Rnor_5.01216,444,048 - 16,444,186UniSTS
RGSC_v3.41212,770,195 - 12,770,333UniSTS
RGSC_v3.41212,770,194 - 12,770,333RGD
RGSC_v3.11212,800,123 - 12,800,261RGD
Celera1214,127,014 - 14,127,152UniSTS
RH 3.4 Map12163.4UniSTS
RH 3.4 Map12163.4RGD
RH 2.0 Map12136.0RGD
Flank 2: (D12Arb13)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2126,833,190 - 6,833,424 (+)MAPPER
Rnor_6.0128,249,608 - 8,249,839NCBI
Rnor_5.01210,334,114 - 10,334,345UniSTS
RGSC_v3.4127,382,721 - 7,382,953RGD
RGSC_v3.4127,382,722 - 7,382,953UniSTS
RGSC_v3.1127,412,650 - 7,412,881RGD
Celera128,578,947 - 8,579,178UniSTS
RH 3.4 Map1273.5UniSTS
RH 3.4 Map1273.5RGD
RH 2.0 Map1261.5RGD
SHRSP x BN Map1212.67RGD
Cytogenetic Map12p11UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)1219318387Rat
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)127977298525593Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
724526Uae3Urinary albumin excretion QTL 34.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)12390696910373166Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12683319017870186Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12931821612829686Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121107382524234895Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382528064557Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121300829619212979Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121363552330827399Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121363552335682913Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)121502518320794014Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121555082638478808Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121587265332974238Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general measurement method: animals which developed endometrial tumors before teh age of 700 days were considered positive, animals were subjected to necropsy when tumors were suspected 1599856
qtl_general association between endometrial carcinoma and BDII allele was not observed in backcross animals 1599853
qtl_general number of animals used: 36; gender: female 1599856
qtl_general software package used: Genescan Analysis Software 1599856