Rf55 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Rf55 (Renal function QTL 55) Rattus norvegicus

Symbol: Rf55
Name: Renal function QTL 55
RGD ID: 1598821
Trait: renal blood flow trait   (VT:2000006)    
Measurement Type: ratio of change in renal blood flow to change in renal perfusion pressure   (CMO:0001239)    
LOD Score: 6.3
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21218,748,008 - 257,976,495RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01238,824,734 - 279,986,079RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01246,113,306 - 287,349,830RGDRnor5.0
RGSC_v3.41224,420,592 - 265,343,617RGDRGSC3.4
RGSC_v3.11224,584,615 - 265,554,662RGD
Cross Type: intercross
Strains Crossed: FHH/EurMcwi FHH-Chr 1BN/Mcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Rf55Ratratio of change in renal blood flow to change in renal perfusion pressure  IDA 1579884 RGD 

Experimental Condition
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Rf55Ratcontrolled in situ renal perfusion pressure  IDA 1579884 RGD 

Measurement Method
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Rf55Ratultrasonic flowmeter  IDA 1579884 RGD 

Rat Strain
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Rf55RatFHH-Chr 1BN/Mcwi  IEA 1579884 RGD 
Rf55RatFHH/EurMcwi  IEA 1579884 RGD 

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Rf55Ratrenal blood flow trait  IDA 1579884 RGD 

Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Identification of a QTL on chromosome 1 for impaired autoregulation of RBF in fawn-hooded hypertensive rats. Lopez B, etal., Am J Physiol Renal Physiol. 2006 May;290(5):F1213-21. Epub 2005 Nov 22.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1310776Zfand5zinc finger AN1-type containing 51218765735218780391Rat
7618157LOC102551544uncharacterized LOC1025515441218792565218797618Rat
9142228LOC103691306uncharacterized LOC1036913061218797024218823843Rat
41061241LOC120100000uncharacterized LOC1201000001218891154218910823Rat
621617Gdaguanine deaminase1218903045218982360Rat
41111402LOC120100370small nucleolar RNA SNORA441218910326218910454Rat
6490675C1h9orf57similar to human chromosome 9 open reading frame 571219079683219084806Rat
41157562LOC120100414small nucleolar RNA SNORA171219114576219114705Rat
1359158C1h9orf85similar to human chromosome 9 open reading frame 851219136085219197723Rat
1305246Abhd17babhydrolase domain containing 17B, depalmitoylase1219198294219232733Rat
11381164LOC108348948uncharacterized LOC1083489481219237610219250592Rat
1307941Cemip2cell migration inducing hyaluronidase 21219330295219407760Rat
41370285Eif4a1-ps7eukaryotic translation initiation factor 4A1, pseudogene 71219386631219389372Rat
1304888Trpm3transient receptor potential cation channel, subfamily M, member 31219673200220557610Rat
41047541LOC120100459small nucleolar RNA SNORA171219771021219771145Rat
41332067LOC120100428small nucleolar RNA SNORA171219869292219869423Rat
6489406Timm23-ps3translocase of inner mitochondrial membrane 23, pseudogene 31219969156219980173Rat
11518304LOC108349823uncharacterized LOC1083498231220224951220261496Rat
7503291LOC102552001uncharacterized LOC1025520011220284052220295326Rat
2325551Mir204microRNA 2041220316931220317040Rat
41225190LOC12010000340S ribosomal protein S12-like1220574554220577707Rat
11445681LOC108349100uncharacterized LOC1083491001220591633220623488Rat
70934Klf9KLF transcription factor 91220700108220725110Rat
1307492Smc5structural maintenance of chromosomes 51220769366220839138Rat
41391465Rnu6-806RNA, U6 small nuclear 8061220856369220856475Rat
1305129Mamdc2MAM domain containing 21220863959221016493Rat
41287817LOC120100498U4 spliceosomal RNA1221085628221085775Rat
1560242Cfap95cilia and flagella associated protein 951221123786221242963Rat
41102373LOC120100401small nucleolar RNA SNORA481221141990221142132Rat
41219068LOC120100460small nucleolar RNA SNORA171221233213221233314Rat
40945859LOC120098082uncharacterized LOC1200980821221255188221260427Rat
708369Ptar1protein prenyltransferase alpha subunit repeat containing 11221283306221326861Rat
40955348Rnu6-65RNA, U6 small nuclear 651221343294221343397Rat
620844Apba1amyloid beta precursor protein binding family A member 11221363769221569496Rat
1307524Entrep1endosomal transmembrane epsin interactor 11221592500221646603Rat
41211547LOC120100127U6 spliceosomal RNA1221643603221643709Rat
41205153LOC120100004uncharacterized LOC1201000041221677917221703867Rat
619807Tjp2tight junction protein 21221709745221838291Rat
1565754Fxnfrataxin1221874007221897543Rat
1310914Pip5k1bphosphatidylinositol-4-phosphate 5-kinase type 1 beta1221907220222183672Rat
41200944LOC120100005uncharacterized LOC1201000051221956410221958663Rat
1310316Pabir1PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 11222114988222116294Rat
41304355Dynlt1-ps1dynein light chain Tctex-type 1, pseudogene11222125549222133864Rat
1359349Tmem252transmembrane protein 2521222316982222321946Rat
1307969Pgm5phosphoglucomutase 51222325638222513434Rat
621716Foxd4forkhead box D41222557494222559189Rat
708495Zng1aZn regulated GTPase metalloprotein activator 1A1222568278222612937Rat
7729455LOC102556915uncharacterized LOC1025569151222610724222638904Rat
1561588Dock8dedicator of cytokinesis 81222649309222842474Rat
41171153LOC120100363small nucleolar RNA SNORA241222808283222808414Rat
1307714Kank1KN motif and ankyrin repeat domains 11222877962223074514Rat
7600426LOC102554752uncharacterized LOC1025547521222973015222980840Rat
2323621Ran-ps1RAN, member RAS oncogene family, pseudogene 11223132286223132860Rat
621640Dmrt1doublesex and mab-3 related transcription factor 11223142859223241333Rat
1306043Dmrt3doublesex and mab-3 related transcription factor 31223244340223264254Rat
1309047Dmrt2doublesex and mab-3 related transcription factor 21223317543223324131Rat
41395459Trnap-agg60transfer RNA proline (anticodon AGG) 601223386056223386136Rat
11400155LOC108349212uncharacterized LOC1083492121223558078223568748Rat
41278963LOC120100006uncharacterized LOC1201000061223632579223634200Rat
9327776LOC103691315uncharacterized LOC1036913151223712697223723908Rat
7594231LOC102555110uncharacterized LOC1025551101223909032223923555Rat
9160927LOC103695057uncharacterized LOC1036950571223944725223966152Rat
1562774Psmb6-ps1proteasome 20S subunit beta 6, pseudogene 11224033071224034353Rat
9453920LOC103691317uncharacterized LOC1036913171224095049224105835Rat
1302988Smarca2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 21224191125224358640Rat
11409422LOC108348917uncharacterized LOC1083489171224434444224436629Rat
41216261LOC120098083uncharacterized LOC1200980831224544345224550155Rat
41400972LOC120100007uncharacterized LOC1201000071224550777224558046Rat
6495932Rps17-ps1ribosomal protein S17, pseudogene 11224590238224590650Rat
7599954LOC102557104uncharacterized LOC1025571041224657115224660713Rat
41004520LOC120100010uncharacterized LOC1201000101224677005224690946Rat
3963Vldlrvery low density lipoprotein receptor1224813539224850400Rat
1309271Kcnv2potassium voltage-gated channel modifier subfamily V member 21224999552225014062Rat
1564753Pum3pumilio RNA-binding family member 31225074332225113995Rat
7700759LOC102555808uncharacterized LOC1025558081225114347225140414Rat
7566943LOC102555989uncharacterized LOC1025559891225289547225334401Rat
2325049Eif4e-ps2eukaryotic translation initiation factor 4E, pseudogene 21225371014225371531Rat
1307779Rfx3regulatory factor X31225449872225709622Rat
41377637LOC120100479U6atac minor spliceosomal RNA1225488774225488891Rat
41097335LOC120100391small nucleolar RNA SNORA511225495834225495966Rat
7517961Thoc3-ps1THO complex 3, pseudogene 11225665659225666454Rat
1589453Ppid-ps2peptidylprolyl isomerase D, pseudogene 21225740072225741290Rat
41401218Rnu6-613RNA, U6 small nuclear 6131225971183225971289Rat
1565505Glis3GLIS family zinc finger 31225976029226395849Rat
41142846LOC120098084uncharacterized LOC1200980841226451090226457544Rat
7715694LOC102546345uncharacterized LOC1025463451226521231226549807Rat
41277114Rnu6-525RNA, U6 small nuclear 5251226541765226541871Rat
3696Slc1a1solute carrier family 1 member 11226549932226631925Rat
1310039Spata6lspermatogenesis associated 6-like1226630470226682979Rat
1566000Plpp6phospholipid phosphatase 61226679100226681952Rat
1588239Phyh-ps1phytanoyl-CoA 2-hydroxylase, pseudogene 11226688444226689337Rat
1565057Tekt5l1tektin 5 like 11226689519226705125Rat
1309295Cdc37l1cell division cycle 37-like 11226705019226733994Rat
619885Ak3adenylate kinase 31226737472226764647Rat
41171347LOC120100015uncharacterized LOC1201000151226782511226787383Rat
1305320Rcl1RNA terminal phosphate cyclase-like 11226824561226869046Rat
2325609Mir101-2microRNA 101-21226860371226860467Rat
2939Jak2Janus kinase 21226995334227054381Rat
62061Insl6insulin-like 61227069958227073493Rat
7710008Phb1-ps9prohibitin 1, pseudogene 91227073574227075424Rat
3579Rln1relaxin 11227079960227082960Rat
1306839Plgrktplasminogen receptor with a C-terminal lysine1227099005227111277Rat
1566211Cd274CD274 molecule1227116674227137379Rat
1585881Nip7-ps2nucleolar pre-rRNA processing protein NIP7, pseudogene 21227152984227153506Rat
1306403Pdcd1lg2programmed cell death 1 ligand 21227158941227223938Rat
1310016Ric1RIC1 homolog, RAB6A GEF complex partner 11227285510227384553Rat
727831Ermp1endoplasmic reticulum metallopeptidase 11227383992227422120Rat
41025615LOC120100017uncharacterized LOC1201000171227432377227441119Rat
41273033LOC120100018uncharacterized LOC1201000181227451357227453734Rat
1306525Mlanamelan-A1227469537227483343Rat
1311595Brd10bromodomain containing 101227490983227572246Rat
11481274LOC10834943360S ribosomal protein L7a pseudogene1227542130227543021Rat
1305165Ranbp6RAN binding protein 61227572394227576915Rat
1597109Trmt6-ps1tRNA methyltransferase 6, pseudogene 11227636838227639063Rat
1311155Il33interleukin 331227701964227736374Rat
1309391Tpd52l3TPD52 like 31227781173227785040Rat
40999271LOC120100019uncharacterized LOC1201000191227782742227792669Rat
1584666Eef1b2-ps3eukaryotic translation elongation factor 1 beta 2, pseudogene 31227799668227800398Rat
1309990Uhrf2ubiquitin like with PHD and ring finger domains 21227814639227877907Rat
1308660Gldcglycine decarboxylase1227883249227962119Rat
2319280Chchd4-ps1coiled-coil-helix-coiled-coil-helix domain containing 4, pseudogene 11227987584227988841Rat
2322594Cycs-ps1cytochrome c, somatic, pseudogene 11227995655227996114Rat
67380Mbl2mannose binding lectin 21228016439228024736Rat
40955270Rpl7a-ps25ribosomal protein L7a, pseudogene 251228084261228086232Rat
1307313Dkk1dickkopf WNT signaling pathway inhibitor 11228381521228385202Rat
1587390Prkg1protein kinase cGMP-dependent 11228409605229638794Rat
40973840LOC120100441small nucleolar RNA SNORA171228916697228916830Rat
1310026Cstf2tcleavage stimulation factor subunit 2, tau variant1228952617228956183Rat
41163236LOC120097462uncharacterized LOC1200974621229200143229213723Rat
41265067LOC120097454uncharacterized LOC1200974541229247793229294393Rat
619834A1cfAPOBEC1 complementation factor1229736037229823499Rat
69410Asah2N-acylsphingosine amidohydrolase 21229865662229973253Rat
727912Sgms1sphingomyelin synthase 11229996673230259591Rat
40989644LOC120100406small nucleolar RNA SNORA481230277767230277910Rat
1598008Nutf2-ps1nuclear transport factor 2, pseudogene 11230295241230297105Rat
1597998Ciapin1-ps1cytokine induced apoptosis inhibitor 1, pseudogene 11230312531230354392Rat
3089Minpp1multiple inositol-polyphosphate phosphatase 11230354483230379730Rat
41074929LOC120100113U4 spliceosomal RNA1230366830230366976Rat
41119829LOC120100289U2 spliceosomal RNA1230410837230411027Rat
1307012Papss23'-phosphoadenosine 5'-phosphosulfate synthase 21230454314230539332Rat
1308570Atad1ATPase family, AAA domain containing 11230544227230610524Rat
61995Ptenphosphatase and tensin homolog1230630443230697070Rat
7552279LOC102547905uncharacterized LOC1025479051230784284230831831Rat
1565695Akr1b8-ps1aldo-keto reductase family 1, member B8, pseudogene 11230808233230809832Rat
9404564LOC10369134460S ribosomal protein L29 pseudogene1230875934230876374Rat
7659550LOC102548095uncharacterized LOC1025480951230966323231037345Rat
1309804Rnlsrenalase, FAD-dependent amine oxidase1231037481231309855Rat
40953009LOC120100359small nucleolar RNA SNORA81231098458231098594Rat
41291421LOC120100496U4 spliceosomal RNA1231197748231197830Rat
7666330Rps4x-ps1ribosomal protein S4, X-linked, pseudogene 11231210277231211564Rat
1565682Lipo1lipase, member O11231311828231328805Rat
2321667Lipjlipase family member J1231363526231376784Rat
708441Lipflipase F, gastric type1231493498231511845Rat
1309724Lipklipase, family member K1231532893231564567Rat
1560354Lipnlipase, family member N1231584950231603456Rat
1304912Lipmlipase, family member M1231618145231637599Rat
1307862Ankrd22ankyrin repeat domain 221231639035231670537Rat
1583011Stambpl1STAM binding protein-like 11231699620231745034Rat
621676Acta2actin alpha 2, smooth muscle1231746527231759307Rat
1597562Dedd-ps1death effector domain-containing, pseudogene 11231765378231766485Rat
619831FasFas cell surface death receptor1231798963231832591Rat
41023146LOC120100158U6 spliceosomal RNA1231804196231804302Rat
1310575Ch25hcholesterol 25-hydroxylase1232014877232016195Rat
3008Lipalipase A, lysosomal acid type1232024351232057735Rat
1307804Ifit2interferon-induced protein with tetratricopeptide repeats 21232102570232108638Rat
1359681Ifit3interferon-induced protein with tetratricopeptide repeats 31232114166232119311Rat
1304872Ifit1blinterferon-induced protein with tetratricopeptide repeats 1B-like1232122618232167317Rat
40956048LOC120100208small nucleolar RNA SNORA711232131169232131300Rat
620599Ifit1interferon-induced protein with tetratricopeptide repeats 11232152038232154103Rat
1311468Slc16a12solute carrier family 16, member 121232184004232262170Rat
1304677Pank1pantothenate kinase 11232324718232395445Rat
2325578Mir107microRNA 1071232337767232337853Rat
7526703LOC102549070uncharacterized LOC1025490701232418940232428236Rat
1308497Kif20bkinesin family member 20B1232428293232483798Rat
1596451Ears2l1glutamyl-tRNA synthetase 2-like 11232504870232506634Rat
1596438Psma5-ps2proteasome 20S subunit alpha 5, pseudogene 21232583582232584351Rat
2322962Npm1-ps13nucleophosmin 1, pseudogene 131232631385232632634Rat
40948512LOC120100445small nucleolar RNA SNORA171232787072232787201Rat
1595146Metap2-ps5methionyl aminopeptidase 2, pseudogene 51233106861233108815Rat
41008230LOC120100195U6 spliceosomal RNA1233392193233392295Rat
41034025LOC120100447small nucleolar RNA SNORA171233401988233402113Rat
41089904LOC120100148U6 spliceosomal RNA1233558763233558869Rat
41320941LOC120100024uncharacterized LOC1201000241233596287233599642Rat
41299898LOC120100436small nucleolar RNA SNORA171233608349233608479Rat
71034Htr75-hydroxytryptamine receptor 71233636442233761063Rat
11385874LOC108353431glyceraldehyde-3-phosphate dehydrogenase pseudogene1233710372233711552Rat
1595116Rpp30ribonuclease P/MRP subunit p301233786048233808958Rat
61989Ankrd1ankyrin repeat domain 11233815851233834891Rat
1583513Pcgf5polycomb group ring finger 51234063854234180022Rat
9179158LOC103691349uncharacterized LOC1036913491234225875234229702Rat
1305536Hectd2HECT domain E3 ubiquitin protein ligase 21234274967234345598Rat
41029999LOC120100025uncharacterized LOC1201000251234369639234371254Rat
1309132Ppp1r3cprotein phosphatase 1, regulatory subunit 3C1234460958234465961Rat
7595572LOC102553702uncharacterized LOC1025537021234506902234511615Rat
41343048LOC120100493small nucleolar RNA U31234564075234564231Rat
1305026Tnks2tankyrase 21234567888234621079Rat
41265797LOC120100026uncharacterized LOC1201000261234639342234643034Rat
1560326Fgfbp3fibroblast growth factor binding protein 31234644023234646028Rat
1564130Btaf1B-TFIID TATA-box binding protein associated factor 11234653219234743903Rat
1598012Rps27a-ps28ribosomal protein S27a, pseudogene 281234661778234662393Rat
1564670Cpeb3cytoplasmic polyadenylation element binding protein 31234749138234931219Rat
1305617Marchf5membrane associated ring-CH-type finger 51234931137234953849Rat
41237401LOC120100185U6 spliceosomal RNA1234959802234959900Rat
7732471LOC102549247uncharacterized LOC1025492471234979363234991619Rat
2861Ideinsulin degrading enzyme1235002984235102448Rat
621258Kif11kinesin family member 111235124371235176760Rat
619932Hhexhematopoietically expressed homeobox1235190455235196042Rat
3653Exoc6exocyst complex component 61235314612235457824Rat
1308843Cyp26c1cytochrome P450, family 26, subfamily C, polypeptide 11235458961235468433Rat
620161Cyp26a1cytochrome P450, family 26, subfamily a, polypeptide 11235471368235475204Rat
1562542Rps12l6ribosomal protein S12 like 61235541127235541541Rat
1564216Myofmyoferlin1235673666235822413Rat
6492554LOC100911555uncharacterized LOC1009115551235790867235800531Rat
11512881LOC108349463uncharacterized LOC1083494631235822486235828622Rat
1305340Cep55centrosomal protein 551235832823235848401Rat
1308252Ffar4free fatty acid receptor 41235873576235891597Rat
3546Rbp4retinol binding protein 41235893917235901315Rat
1309844Pde6cphosphodiesterase 6C1235909583235965435Rat
1309482Fra10ac1FRA10A associated CGG repeat 11235969071236001074Rat
1561251RGD1561251RGD15612511236008481236025140Rat
41336947LOC120100027uncharacterized LOC1201000271236043040236049095Rat
628742Lgi1leucine-rich, glioma inactivated 11236043269236084617Rat
1595908Slc35g1solute carrier family 35, member G11236163593236172115Rat
69424Plce1phospholipase C, epsilon 11236243445236552571Rat
7536824Sephs1-ps1selenophosphate synthetase 1, pseudogene 11236309546236310671Rat
1560656Noc3lNOC3-like DNA replication regulator1236556037236585372Rat
9377071Tbc1d12TBC1 domain family, member 121236603597236685859Rat
1309820Hellshelicase, lymphoid specific1236701704236748239Rat
11437438Rpl35al10ribosomal protein L35A like 101236705133236705600Rat
41289643Rpl27a-ps13ribosomal protein L27a, pseudogene 131236760660236762396Rat
2469Cyp2c11cytochrome P450, subfamily 2, polypeptide 111236762719236799069Rat
1563697Cyp2c24cytochrome P450, family 2, subfamily c, polypeptide 241236873967236936238Rat
41136177Rnu6-571RNA, U6 small nuclear 5711236964451236964553Rat
11406254LOC10834910440S ribosomal protein S8 pseudogene1236965480236966094Rat
2320073Cyp2c55cytochrome P450, family 2, subfamily c, polypeptide 551237009411237054555Rat
6488119Cyp2c66cytochrome P450, family 2, subfamily c, polypeptide 661237078517237169841Rat
41178207Cyp2c6_v1-ps3cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1, pseudogene 31237228235237233616Rat
41261854Cyp2c6v1l1cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1 like 11237244891237283416Rat
41270400LOC120100168U6 spliceosomal RNA1237316377237316482Rat
620379Cyp2c7cytochrome P450, family 2, subfamily c, polypeptide 71237332641237388714Rat
41066878LOC120100152U6 spliceosomal RNA1237403828237403930Rat
40939684Cyp2c6_v1-ps4cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1, pseudogene 41237673566237678251Rat
6491302LOC100911718cytochrome P450 2C6-like1237693101237722462Rat
41210766LOC120100165U6 spliceosomal RNA1237755141237755246Rat
41099479LOC120098584cytochrome P450 2C7-like1237771336237834092Rat
41391967LOC120100177U6 spliceosomal RNA1237852631237852728Rat
41285154Cyp2c6_v1-ps5cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1, pseudogene 51237919053237923665Rat
619934Cyp2c6cytochrome P450, family 2, subfamily C, polypeptide 61237938521237976238Rat
2320131Cyp2c66lcytochrome P450, family 2, subfamily c, polypeptide 66 like1238215982238266699Rat
41303954LOC120100032uncharacterized LOC1201000321238291013238316860Rat
2323640Cyp2c6_v1-ps1cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1, pseudogene 11238332354238339457Rat
11466397Cyp2c6_v1-ps2cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1, pseudogene 21238352261238391716Rat
2319920Cyp2c7l1cytochrome P450, family 2, subfamily c, polypeptide 7 like 11238457701238466744Rat
41048873LOC120100034uncharacterized LOC1201000341238607015238665792Rat
2470Cyp2c12cytochrome P450, family 2, subfamily c, polypeptide 121238699859238757011Rat
620363Cyp2c13cytochrome P450, family 2, subfamily c, polypeptide 131238786764238867195Rat
40974054LOC120100134U6 spliceosomal RNA1238926408238926515Rat
620368Cyp2c22cytochrome P450, family 2, subfamily c, polypeptide 221238991698239031323Rat
68324Pdlim1PDZ and LIM domain 11239042372239091074Rat
1586598Sorbs1sorbin and SH3 domain containing 11239107882239330276Rat
40961697LOC120097534uncharacterized LOC1200975341239197281239204076Rat
7640229LOC102555231uncharacterized LOC1025552311239335354239350999Rat
1311431Aldh18a1aldehyde dehydrogenase 18 family, member A11239375657239407956Rat
14398574Mir6317-1microRNA mir-6317-11239398926239399052Rat
1305166Tctn3tectonic family member 31239414003239425273Rat
6486355Hnrnpc-ps6heterogeneous nuclear ribonucleoprotein C, pseudogene 61239425495239429608Rat
69265Entpd1ectonucleoside triphosphate diphosphohydrolase 11239425515239552323Rat
41012984LOC120097545uncharacterized LOC1200975451239484888239496808Rat
1310408Cc2d2bcoiled-coil and C2 domain containing 2B1239561506239655771Rat
1306399Ccnjcyclin J1239659588239677367Rat
41246778LOC120100114U4 spliceosomal RNA1239700173239700374Rat
1305314Zfp518azinc finger protein 518A1239719305239744978Rat
1561933BlnkB-cell linker1239753640239821113Rat
1305054DnttDNA nucleotidylexotransferase1239856391239888283Rat
41363471LOC120100035uncharacterized LOC1201000351239872667239883614Rat
1307776Opalinoligodendrocytic myelin paranodal and inner loop protein1239891137239909388Rat
1559756Tll2tolloid-like 21239912648240028168Rat
40981719LOC120100036uncharacterized LOC1201000361239932606239939339Rat
1564625Tm9sf3transmembrane 9 superfamily member 31240032060240085125Rat
1307744Pik3ap1phosphoinositide-3-kinase adaptor protein 11240090854240245007Rat
1311704Lcorligand dependent nuclear receptor corepressor1240298565240405627Rat
69307Slit1slit guidance ligand 11240409559240558127Rat
1593044Arhgap19Rho GTPase activating protein 191240571554240617361Rat
7718071LOC102553733uncharacterized LOC1025537331240625369240638280Rat
9147096Frat1FRAT regulator of WNT signaling pathway 11240638309240640857Rat
1591882Frat2FRAT regulator of WNT signaling pathway 21240654120240656449Rat
1591867Rrp12ribosomal RNA processing 121240672378240705992Rat
3312Pgam1phosphoglycerate mutase 11240723832240731443Rat
1591855Exosc1exosome component 11240734777240745431Rat
1591893Zdhhc16zinc finger DHHC-type palmitoyltransferase 161240745606240757009Rat
727890Mms19MMS19 homolog, cytosolic iron-sulfur assembly component1240757279240794291Rat
41239575LOC120100188U6 spliceosomal RNA1240788425240788524Rat
1308172Ubtd1ubiquitin domain containing 11240794570240845795Rat
1305104Ankrd2ankyrin repeat domain 21240847111240856563Rat
1310475Hoga14-hydroxy-2-oxoglutarate aldolase 11240856991240884243Rat
1588156MGC93861hypothetical protein LOC6820101240863403240864762Rat
1307336Morn4MORN repeat containing 41240888338240898644Rat
620485Pi4k2aphosphatidylinositol 4-kinase type 2 alpha1240902804240929234Rat
621721Avpi1arginine vasopressin-induced 11240930236240936154Rat
7605594LOC102554176uncharacterized LOC1025541761240939155240942812Rat
1309811Marveld1MARVEL domain containing 11240954050240958101Rat
735177Zfyve27zinc finger FYVE-type containing 271240979831241003193Rat
1310369Sfrp5secreted frizzled-related protein 51241006762241011224Rat
41344988Josd2-ps1Josephin domain containing 2, pseudogene 11241012586241031268Rat
7501631LOC102547392uncharacterized LOC1025473921241048266241059019Rat
1583839Golga7bgolgin A7 family, member B1241056427241080890Rat
4888610Mir3085microRNA 30851241088905241088993Rat
621085Crtac1cartilage acidic protein 11241091679241233677Rat
1307934R3hcc1lR3H domain and coiled-coil containing 1-like1241317199241395240Rat
41348011LOC120100039uncharacterized LOC1201000391241329290241343424Rat
1308588Loxl4lysyl oxidase-like 41241396183241416385Rat
41276096LOC120100456small nucleolar RNA SNORA171241497983241498105Rat
1303232Pyroxd2pyridine nucleotide-disulphide oxidoreductase domain 21241523278241549083Rat
69193Hps1HPS1, biogenesis of lysosomal organelles complex 3 subunit 11241551180241577292Rat
1307959Hpse2heparanase 2 (inactive)1241582904242284348Rat
7554188Tdpoz1-ps20TD and POZ domain containing 1, pseudogene 201241613455241616687Rat
7546946Pak1-ps1p21 (RAC1) activated kinase 1, pseudogene 11241780638241787272Rat
1308728Cnnm1cyclin and CBS domain divalent metal cation transport mediator 11242296367242354957Rat
2721Got1glutamic-oxaloacetic transaminase 11242357293242381535Rat
41207320Trit1-ps1tRNA isopentenyltransferase 1, pseudogene 11242387348242412800Rat
1308521Nkx2-3NK2 homeobox 31242478130242481083Rat
1584155Slc25a28solute carrier family 25 member 281242530877242542140Rat
1310638Entpd7ectonucleoside triphosphate diphosphohydrolase 71242559365242601044Rat
1312043Cox15cytochrome c oxidase assembly homolog COX151242605588242622279Rat
1304966CutccutC copper transporter1242622281242637048Rat
7555190Cstb-ps1cystatin B, pseudogene 11242661894242662481Rat
2366Abcc2ATP binding cassette subfamily C member 21242664657242723239Rat
1583840Dnmbpdynamin binding protein1242736189242829431Rat
70931Cpn1carboxypeptidase N subunit 11242844575242873465Rat
41096103Csnk2a1-ps2casein kinase 2 alpha 1, pseudogene 21242861730242865414Rat
620370Cyp2c23cytochrome P450, family 2, subfamily c, polypeptide 231242889218242913869Rat
1307058Erlin1ER lipid raft associated 11242921147242956472Rat
1306661Chukcomponent of inhibitor of nuclear factor kappa B kinase complex1242959539242995066Rat
1304716Cwf19l1CWF19 like cell cycle control factor 11242997720243020989Rat
41366654Snora12small nucleolar RNA, H/ACA box 121243001398243001540Rat
1306551Bloc1s2biogenesis of lysosomal organelles complex-1, subunit 21243024611243031749Rat
1306261Pkd2l1polycystin 2 like 1, transient receptor potential cation channel1243032891243070031Rat
40956323Rnu6-630RNA, U6 small nuclear 6301243043698243043804Rat
1595370Scd3stearoyl-coenzyme A desaturase 31243093057243114451Rat
41009383Scd-ps1stearoyl-CoA desaturase, pseudogene 11243119299243137168Rat
11479482LOC108349475uncharacterized LOC1083494751243163002243169001Rat
621177Scd2stearoyl-Coenzyme A desaturase 21243169171243182231Rat
1563648Scd4stearoyl-coenzyme A desaturase 41243203433243216007Rat
621176Scdstearoyl-CoA desaturase1243269745243282878Rat
41245632LOC1201002175S ribosomal RNA1243285618243285736Rat
1307644Wnt8bWnt family member 8B1243354145243376000Rat
1598329Sec31bSEC31 homolog B, COPII coat complex component1243376283243404557Rat
1309129Ndufb8NADH:ubiquinone oxidoreductase subunit B81243408656243413715Rat
1308281Hif1anhypoxia inducible factor 1 subunit alpha inhibitor1243419175243440464Rat
7716077LOC102548668uncharacterized LOC1025486681243600353243602047Rat
1305568Pax2paired box 21243616509243697454Rat
2323148Tmem258-ps1transmembrane protein 258, pseudogene 11243721747243722003Rat
41120962LOC120100041uncharacterized LOC1201000411243736689243757175Rat
41053224LOC1201001105S ribosomal RNA1243761050243761168Rat
1560300Slf2SMC5-SMC6 complex localization factor 21243782786243845418Rat
41232861Rnu6-588RNA, U6 small nuclear 5881243798008243798114Rat
1310436Sema4gsemaphorin 4G1243849979243865343Rat
1307593Mrpl43mitochondrial ribosomal protein L431243866848243868285Rat
1307884Twnktwinkle mtDNA helicase1243867568243874802Rat
1359249Lzts2leucine zipper tumor suppressor 21243876665243888489Rat
1309882Pdzd7PDZ domain containing 71243888295243907778Rat
620716Sfxn3sideroflexin 31243907958243917065Rat
1310698Kazald1Kazal-type serine peptidase inhibitor domain 11243939596243943060Rat
1563655Tlx1T-cell leukemia, homeobox 11244005057244011318Rat
7597255LOC102548928uncharacterized LOC1025489281244051587244059818Rat
41171415LOC120098088uncharacterized LOC1200980881244080235244081188Rat
1564197Lbx1ladybird homeobox 11244083873244085690Rat
41111602LOC120100042uncharacterized LOC1201000421244086089244094622Rat
6490543LOC100911827uncharacterized LOC1009118271244182591244190639Rat
1359721Btrcbeta-transducin repeat containing E3 ubiquitin protein ligase1244210299244380126Rat
11497425LOC108349487uncharacterized LOC1083494871244389243244391611Rat
1308053PollDNA polymerase lambda1244400202244408762Rat
1307648Dpcddeleted in primary ciliary dyskinesia1244408766244426891Rat
1306518Fbxw4F-box and WD repeat domain containing 41244426892244514188Rat
7573700LOC102550220uncharacterized LOC1025502201244566167244579290Rat
70891Fgf8fibroblast growth factor 81244584477244590578Rat
1565542Npm3nucleophosmin/nucleoplasmin, 31244595638244597623Rat
621077OgaO-GlcNAcase1244598285244633835Rat
70887Kcnip2potassium voltage-gated channel interacting protein 21244641147244664939Rat
9299787Armh3armadillo-like helical domain containing 31244666250244848688Rat
631341Hps6HPS6, biogenesis of lysosomal organelles complex 2 subunit 31244853256244855865Rat
1310359Ldb1LIM domain binding 11244864168244890007Rat
41241292Ldb1lLIM domain binding 1 like1244889862244894678Rat
1309688Pprc1PPARG related coactivator 11244901985244918587Rat
621578Nolc1nucleolar and coiled-body phosphoprotein 11244921275244932089Rat
1307263Elovl3ELOVL fatty acid elongase 31244997287245001115Rat
3332Pitx3paired-like homeodomain 31245001106245013881Rat
2324796Atp5mg-ps12ATP synthase membrane subunit g, pseudogene 121245016801245017235Rat
1307160Gbf1golgi brefeldin A resistant guanine nucleotide exchange factor 11245018535245147052Rat
41399231LOC120100126U6 spliceosomal RNA1245039585245039691Rat
41117311Pin4-ps7peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 71245095501245106619Rat
41257533Rpl19-ps3ribosomal protein L19, pseudogene 31245147194245150994Rat
1307189Nfkb2nuclear factor kappa B subunit 21245164586245173225Rat
620297Psdpleckstrin and Sec7 domain containing1245173279245188681Rat
1306444Fbxl15F-box and leucine-rich repeat protein 151245189732245191973Rat
1308096Cuedc2CUE domain containing 21245192057245200594Rat
2314885Mir146bmicroRNA 146b1245203438245203525Rat
40933704C1h10orf95similar to human chromosome 10 open reading frame 951245210228245212080Rat
1309313Mfsd13amajor facilitator superfamily domain containing 13A1245216610245236314Rat
1307025Actr1aactin related protein 1A1245237821245256618Rat
1559462SufuSUFU negative regulator of hedgehog signaling1245257725245355576Rat
1585223Trim8tripartite motif-containing 81245369632245384513Rat
69327Arl3ADP ribosylation factor like GTPase 31245400659245446673Rat
40973998Trnah-augtransfer RNA histidin (anticodon AUG)1245429192245429266Rat
1306131Sfxn2sideroflexin 21245447014245459312Rat
1305793Wbp1lWW domain binding protein 1-like1245472292245528627Rat
41278540LOC120100047uncharacterized LOC1201000471245513183245514320Rat
2456Cyp17a1cytochrome P450, family 17, subfamily a, polypeptide 11245535462245543148Rat
1311783Borcs7BLOC-1 related complex subunit 71245564347245578182Rat
621325As3mtarsenite methyltransferase1245595939245628921Rat
1308162Cnnm2cyclin and CBS domain divalent metal cation transport mediator 21245643682245769542Rat
2323387Nt5c25'-nucleotidase, cytosolic II1245770993245896925Rat
11360257Trnar-ucu2transfer RNA arginine (anticodon UCU) 21245884622245884694Rat
2911Inainternexin neuronal intermediate filament protein, alpha1245896775245908330Rat
1306904Pcgf6polycomb group ring finger 61245925354245944964Rat
1311332Taf5TATA-box binding protein associated factor 51245958428245973914Rat
631426Atp5mkATP synthase membrane subunit K1245973910245980702Rat
1304933Pdcd11programmed cell death 111245980840246021999Rat
1308276Calhm2calcium homeostasis modulator family member 21246022324246028050Rat
1564891Calhm1calcium homeostasis modulator 11246030269246032988Rat
1560215Calhm3calcium homeostasis modulator 31246043258246048259Rat
1307021Neurl1neuralized E3 ubiquitin protein ligase 11246066830246152890Rat
1311185Sh3pxd2aSH3 and PX domains 2A1246153660246359806Rat
7669753LOC102552122uncharacterized LOC1025521221246184403246206661Rat
41393987Trnap-agg27transfer RNA proline (anticodon AGG) 271246363658246363732Rat
1305637Stn1STN1 subunit of CST complex1246391311246429844Rat
41137166LOC120100048uncharacterized LOC1201000481246401890246417045Rat
41091111LOC120100049uncharacterized LOC1201000491246439526246443224Rat
11396518LOC10834979440S ribosomal protein S8 pseudogene1246463433246465508Rat
3780SlkSTE20-like kinase1246473712246529643Rat
1311130Col17a1collagen type XVII alpha 1 chain1246530589246577559Rat
41268803LOC120100451small nucleolar RNA SNORA171246597266246597365Rat
41256121Rnu6-982RNA, U6 small nuclear 9821246601434246601537Rat
1305481Sfr1SWI5-dependent homologous recombination repair protein 11246619235246623250Rat
1560545Cfap43cilia and flagella associated protein 431246625259246712438Rat
70952Gsto1glutathione S-transferase omega 11246721089246731228Rat
1310764Gsto2glutathione S-transferase omega 21246731314246757592Rat
6488464Itpripinositol 1,4,5-trisphosphate receptor interacting protein1246762804246786379Rat
41387482LOC120100050uncharacterized LOC1201000501246782447246786746Rat
4888614Mir3584microRNA 35841246786249246786329Rat
7656374Cfap58cilia and flagella associated protein 581246802691246911363Rat
11516969Rpl21l7ribosomal protein L21 like 71246824363246825515Rat
11514905Trnak-cuu1transfer RNA lysine (anticodon CUU) 11247030084247030156Rat
1310974Sorcs3sortilin-related VPS10 domain containing receptor 31247099178247734027Rat
41361186LOC120100051uncharacterized LOC1201000511247131099247134646Rat
11496109Trnak-cuu2transfer RNA lysine (anticodon CUU) 21247319517247319589Rat
41068081LOC120100433small nucleolar RNA SNORA171247357347247357477Rat
41147363LOC120100052uncharacterized LOC1201000521247854390247857655Rat
41295772LOC120100408small nucleolar RNA SNORA481247861966247862109Rat
7531295LOC102553570uncharacterized LOC1025535701248166322248202658Rat
41196429LOC120100053uncharacterized LOC1201000531248469246248525675Rat
1561154Hspa8-ps17heat shock protein family A (Hsp70) member 8, pseudogene 171248670456248672399Rat
2322523Timm23-ps4translocase of inner mitochondrial membrane 23, pseudogene 41249007955249008573Rat
7579721LOC102554215uncharacterized LOC1025542151249022403249054065Rat
1305910Sorcs1sortilin-related VPS10 domain containing receptor 11249080662249594520Rat
41122474LOC120097667uncharacterized LOC1200976671249571775249580832Rat
7651693LOC102554335uncharacterized LOC1025543351249604941249670248Rat
40971877LOC120100146U6 spliceosomal RNA1250185783250185889Rat
1596933Cwf19l2-ps1CWF19 like cell cycle control factor 2, pseudogene 11250318679250320350Rat
41095611LOC120100054uncharacterized LOC1201000541250331260250352395Rat
2321699Zc3h15-ps1zinc finger CCCH-type containing 15, pseudogene 11250612247250613733Rat
1587125LOC679558hypothetical protein LOC6795581250821292250822426Rat
1587108Nup133-ps1nucleoporin 133, pseudogene 11251080269251083455Rat
2915Ins1insulin 11251244973251245540Rat
1332901Olr385olfactory receptor 3851251304771251307962Rat
1566300Rccd1-ps1RCC1 domain containing 1, pseudogene 11251725706251730317Rat
1561333Rpl8l1ribosomal protein L8 like 11251920614251921456Rat
621274Xpnpep1X-prolyl aminopeptidase 11252001366252052077Rat
7749911Mrpl2-ps1mitochondrial ribosomal protein L2, pseudogene 11252045464252046435Rat
11415116LOC108349045uncharacterized LOC1083490451252109375252149429Rat
2043Add3adducin 31252147341252255126Rat
3128Mxi1MAX interactor 1, dimerization protein1252323915252383682Rat
11517691LOC108349710uncharacterized LOC1083497101252334236252340443Rat
1309151Smndc1survival motor neuron domain containing 11252389675252400749Rat
9333280LOC103691375uncharacterized LOC1036913751252424747252428991Rat
41351795LOC120100378U2 spliceosomal RNA1252426043252426198Rat
7499870LOC102551352uncharacterized LOC1025513521252461331252463112Rat
41311433LOC120100056uncharacterized LOC1201000561252464379252469037Rat
620854Dusp5dual specificity phosphatase 51252538408252555320Rat
2321899Rps12l2ribosomal protein S12-like 21252597641252598162Rat
62006Smc3structural maintenance of chromosomes 31252601422252644522Rat
1307427Rbm20RNA binding motif protein 201252683760252907465Rat
41301989LOC120100058uncharacterized LOC1201000581252872519252877817Rat
620816Pdcd4programmed cell death 41252921342252944278Rat
6498801Bbip1BBSome interacting protein 11252943589252959512Rat
1308146Shoc2SHOC2 leucine-rich repeat scaffold protein1252958939253048820Rat
41188207LOC120100368small nucleolar RNA SNORA201252970938252971065Rat
2056Adra2aadrenoceptor alpha 2A1253061480253064280Rat
41268475LOC120100059uncharacterized LOC1201000591253197596253204527Rat
7726077LOC102552097uncharacterized LOC1025520971253539545253560364Rat
41013695Cenpt-ps1centromere protein T, pseudogene 11253768789253770732Rat
41317161LOC120098089uncharacterized LOC1200980891254003917254009248Rat
41252668LOC120100060uncharacterized LOC1201000601254013915254016089Rat
7724630LOC102553657uncharacterized LOC1025536571254033150254040657Rat
61847Gpamglycerol-3-phosphate acyltransferase, mitochondrial1254106323254170755Rat
41394270LOC120098625extensin-like1254155889254157007Rat
1305835Tectbtectorin beta1254221621254236669Rat
621853Gucy2gguanylate cyclase 2G1254237778254280277Rat
69402Acsl5acyl-CoA synthetase long-chain family member 51254289513254336608Rat
1304657Zdhhc6zinc finger DHHC-type palmitoyltransferase 61254335472254356141Rat
621490Vti1avesicle transport through interaction with t-SNAREs 1A1254356343254661854Rat
7536522LOC102554304uncharacterized LOC1025543041254627579254634331Rat
41026487Trnav-aac8transfer RNA valine (anticodon AAC) 81254740030254740104Rat
1583621Tcf7l2transcription factor 7 like 21254785956254978967Rat
41149020LOC120100061uncharacterized LOC1201000611254786514254787294Rat
41158907LOC120100062uncharacterized LOC1201000621255013488255019258Rat
41219028LOC120098090uncharacterized LOC1200980901255073423255091957Rat
9414347LOC103691380uncharacterized LOC1036913801255148172255204240Rat
40981878LOC120100063uncharacterized LOC1201000631255235859255269252Rat
41305682LOC120100434small nucleolar RNA SNORA171255305326255305444Rat
1302979Habp2hyaluronan binding protein 21255315870255350161Rat
1306731Nrapnebulin-related anchoring protein1255350113255427704Rat
620944Casp7caspase 71255437438255476737Rat
1559884Plekhs1pleckstrin homology domain containing S11255495634255525353Rat
9261776LOC103691381uncharacterized LOC1036913811255556923255559966Rat
1590633Rpl19-ps2ribosomal protein L19, pseudogene 21255566283255566849Rat
41293690LOC120100457small nucleolar RNA SNORA171255568950255569042Rat
1306156Dclre1aDNA cross-link repair 1A1255569911255589815Rat
1307348Nhlrc2NHL repeat containing 21255589743255648904Rat
7525733LOC102547573uncharacterized LOC1025475731255694149255706423Rat
41207760LOC120100064uncharacterized LOC1201000641255706500255711236Rat
2059Adrb1adrenoceptor beta 11255771962255774973Rat
7702517LOC102547814uncharacterized LOC1025478141255819667255823784Rat
1307158Ccdc186coiled-coil domain containing 1861255831663255871954Rat
1306140Tdrd1tudor domain containing 11255871939255919222Rat
1562000Vwa2von Willebrand factor A domain containing 21255922263255963920Rat
1310668Afap1l2actin filament associated protein 1-like 21255964238256060828Rat
1565768Ablim1actin-binding LIM protein 11256083747256372075Rat
41351922LOC120100065uncharacterized LOC1201000651256172493256186233Rat
41058777LOC120100066uncharacterized LOC1201000661256380079256388222Rat
1306116Fhip2aFHF complex subunit HOOK interacting protein 2A1256417533256444109Rat
7489025Mir6316microRNA 63161256501216256501316Rat
1308502Trub1TruB pseudouridine synthase family member 11256513418256554549Rat
7554379LOC102551125uncharacterized LOC1025511251256568371256577944Rat
1563485Atrnl1attractin like 11256670976257219291Rat
41071757Rps19-ps14ribosomal protein S19, pseudogene 141256991846256992391Rat
41120400LOC120097692uncharacterized LOC1200976921257220491257242191Rat
11499189LOC108349828uncharacterized LOC1083498281257234383257241269Rat
2681Gfra1GDNF family receptor alpha 11257315682257552004Rat
7573768LOC102556644uncharacterized LOC1025566441257337682257361907Rat
40936949Trnap-ggg2transfer RNA proline (anticodon GGG) 21257560546257560626Rat
41170528Trnap-ggg9transfer RNA proline (anticodon GGG) 91257579412257579492Rat
1359412Ccdc172coiled-coil domain containing 1721257629188257682373Rat
3360Pnlippancreatic lipase1257774012257811656Rat
620792Pnliprp1pancreatic lipase-related protein 11257867885257883514Rat
620793Pnliprp2pancreatic lipase related protein 21257897766257916434Rat
1584737Spmip5sperm microtubule inner protein 51257926555257934873Rat
1305531Hspa12aheat shock protein family A (Hsp70) member 12A1257935642258096602Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10097D1Smu21291253050519253050648Ratregion
10105D1Smu11691255785337255785506Ratregion
10432D1Mgh243001245542075245542378Ratregion
10445D1Wox251981238755477238755659Ratregion
10446D1Mgh291221238755490238755596Ratregion
10805D1Mgh131491245907761245907899Ratregion
11148D1Mgh251701229550480229550676Ratregion
33830D1Mit321491244113147244113296Ratregion
33945D1Mit181211218753689218753816Ratregion
34009D1Mit341241225126575225126682Ratregion
34194D1Mgh141491256448513256448636Ratregion
34232D1Mgh151501254773191254773351Ratregion
34517D1Mgh321091241799011241799120Ratregion
33569D1Mit311771245480298245480477Ratregion
36083D1Rat1191731236036277236036450Ratregion
36169D1Rat891711257976324257976495Ratregion
36219D1Rat3841651223390805223390953Ratregion
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5502006MARC_23511-23512:1027359213:11661240735869240736596Ratregion
5502228Ins13021251245159251245461Ratregion
5502678Acsl5741254331296254331569Ratregion
5502977Gfra101257549390257550528Ratregion
5502319RH1244631391218773564218774270Ratregion
5502399RH1247151891245528414245528603Ratregion
5502403RH1247432851239549937239550222Ratregion
Position Markers

Flank 1: (D1Rat73)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21218,748,008 - 218,748,178 (+)MAPPER
Rnor_6.01238,824,734 - 238,824,901NCBI
Rnor_5.01246,113,306 - 246,113,473UniSTS
RGSC_v3.41224,420,592 - 224,420,760RGD
RGSC_v3.41224,420,593 - 224,420,760UniSTS
RGSC_v3.11224,584,615 - 224,584,783RGD
Celera1216,003,300 - 216,003,467UniSTS
RH 2.0 Map11189.4RGD
SHRSP x BN Map1116.5799RGD
FHH x ACI Map1106.86RGD
Peak: (D1Rat376)
Rat AssemblyChrPosition (strand)Source
RH 3.4 Map11651.9UniSTS
RH 3.4 Map11651.9RGD
RH 2.0 Map11260.7RGD
SHRSP x BN Map1141.31RGD
Flank 2: (D1Rat89)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21257,976,324 - 257,976,495 (+)MAPPER
Rnor_6.01279,985,909 - 279,986,079NCBI
Rnor_5.01287,349,660 - 287,349,830UniSTS
RGSC_v3.41265,343,371 - 265,343,617RGD
RGSC_v3.41265,343,447 - 265,343,617UniSTS
RGSC_v3.11265,554,492 - 265,554,662RGD
Celera1253,635,242 - 253,635,412UniSTS
RH 3.4 Map11692.3RGD
RH 3.4 Map11692.3UniSTS
RH 2.0 Map11311.6999RGD
SHRSP x BN Map1145.88RGD
Cytogenetic Map1q55UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1357335Bw39Body weight QTL 393.3body mass (VT:0001259)body weight (CMO:0000012)1197814409242814409Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
61455Niddm7Non-insulin dependent diabetes mellitus QTL 75.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1214537555238757011Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1174133260219133260Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
631837Niddm35Non-insulin dependent diabetes mellitus QTL 350.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1238699859259647894Rat
631836Stl31Serum triglyceride level QTL 314.645e-06blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1237147813260522016Rat
631838Niddm36Non-insulin dependent diabetes mellitus QTL 360.01insulin secretion trait (VT:0003564)calculated pancreatic islet insulin release measurement (CMO:0001217)1184550676229550676Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1150700247252085048Rat
734767Niddm57Non-insulin dependent diabetes mellitus QTL 57body mass (VT:0001259)body weight (CMO:0000012)1224054293260122809Rat
1358898Bp255Blood pressure QTL 2553.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1191019702246062233Rat
631843Bw116Body weight QTL 1164.10.016abdominal adipose amount (VT:1000220)abdominal fat pad weight (CMO:0000088)1224054293260122809Rat
2300175Bmd40Bone mineral density QTL 4015.40.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)1201554356246554356Rat
731175Uae20Urinary albumin excretion QTL 203.50.0018urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1221264111259647894Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1144267353222987745Rat
724538Kidm1Kidney mass QTL 13.2kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1213707201252085212Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1151162766225824951Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1150700142252085212Rat
8552891Epfw5Epididymal fat weight QTL 54.4epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1193113876238113876Rat
734769Niddm58Non-insulin dependent diabetes mellitus QTL 58body mass (VT:0001259)body weight (CMO:0000012)1224569538260122809Rat
734768Niddm59Non-insulin dependent diabetes mellitus QTL 59body mass (VT:0001259)body weight (CMO:0000012)1213843987258843987Rat
1358890Bp259Blood pressure QTL 2593.06arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1210702053260522016Rat
724533Rf51Renal function QTL 515.30.0002kidney plasma flow trait (VT:0005524)renal plasma flow (CMO:0001914)1218753816256448513Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1214647894259647894Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1214647894259647894Rat
1357399Bw45Body weight QTL 453.05body mass (VT:0001259)body mass index (BMI) (CMO:0000105)1206329708251329708Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1222363780260522016Rat
2316896Gluco57Glucose level QTL 577.2blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1228985440245907899Rat
1357404Bw42Body weight QTL 424.490.0001body mass (VT:0001259)body weight (CMO:0000012)1206329708251329708Rat
1358916Kidm22Kidney mass QTL 223.32kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1210702053240947965Rat
2312564Glom18Glomerulus QTL 182.40.003kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1185356336231689108Rat
1331790Bp201Blood pressure QTL 2013.127arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1198211513225126682Rat
631658Cm7Cardiac mass QTL 75.320.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)1196248093241248093Rat
1600380Niddm70Non-insulin dependent diabetes mellitus QTL 703.10.0008blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1176550523221550523Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1582206Kidm33Kidney mass QTL 336.9kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1188377360224054420Rat
8655855Arrd3Age-related retinal degeneration QTL 33.07lens clarity trait (VT:0001304)cataract incidence/prevalence measurement (CMO:0001585)1183970203243914901Rat
1600374Mcs17Mammary carcinoma susceptibility QTL 173mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1197670404242670404Rat
1598839Rf56Renal function QTL 56renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1245907761257976495Rat
1600363Hc6Hypercalciuria QTL 62.7urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1203995416244113296Rat
2293083Iddm25Insulin dependent diabetes mellitus QTL 254.18blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1181829673224569684Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
1358191Ept10Estrogen-induced pituitary tumorigenesis QTL 103.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)1192825253243914732Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1216255568260522016Rat
631669Iddm9Insulin dependent diabetes mellitus QTL 92.80.039blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1233190394258625266Rat
1598821Rf55Renal function QTL 556.3renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1218748008257976495Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
631690Scl5Serum cholesterol level QTL 52.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1236125214260522016Rat
2302375Bw83Body weight QTL 834.870.0002body mass (VT:0001259)body weight (CMO:0000012)1197697768242697768Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
2293674Bss39Bone structure and strength QTL 397.10.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)1201554356246554356Rat
5508828Leukc3Leukocyte quantity QTL 3eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)1218108584224054420Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1216255568260522016Rat
1600392Bw123Body weight QTL 1230.001body mass (VT:0001259)body weight (CMO:0000012)1223201027260522016Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1195804352257091168Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1177227632256448636Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
1558658Bw59Body weight QTL 593.50.0003body mass (VT:0001259)body weight (CMO:0000012)1178784622223784622Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1206081677251081677Rat
1600399Niddm65Non-insulin dependent diabetes mellitus QTL 650.004blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1248746112249254376Rat
1600384Niddm66Non-insulin dependent diabetes mellitus QTL 660.000005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1252645447253439819Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
2293694Bss38Bone structure and strength QTL 387.050.0001femur strength trait (VT:0010010)femur stiffness (CMO:0001674)1201554356246554356Rat
1600390Niddm64Non-insulin dependent diabetes mellitus QTL 640.003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1247683763248192604Rat
1300108Rf8Renal function QTL 83.75renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1228581588259647894Rat
1300145Rf7Renal function QTL 72.96urine creatinine amount (VT:0010540)urine creatinine level (CMO:0000125)1185145134221264292Rat
8655655Arrd2Age-related retinal degeneration QTL 27.79retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1183970203243914901Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1225126575260522016Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1149448574221264292Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1181133855226133855Rat
2293655Bss36Bone structure and strength QTL 3610.660.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1201554356246554356Rat
1298084Thym4Thymus enlargement QTL 410.68thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1197814409242814409Rat
1358292Cm37Cardiac mass QTL 376.28e-07heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)1196248093241248093Rat
61376Bp42Blood pressure QTL 4223.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1197814409242814409Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459259647894Rat
634312Bp143Blood pressure QTL 14330.0002arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1182623426219932796Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1156677124218753816Rat
10059600Bp378Blood pressure QTL 3783.080.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1176869060221869060Rat
10053715Scort24Serum corticosterone level QTL 242.130.0088blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1221414816260522016Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
634321Hc1Hypercalciuria QTL 12.91urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1178810256240830002Rat
2292218Kidm35Kidney mass QTL 35kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1199368955224569684Rat
61400Niddm1Non-insulin dependent diabetes mellitus QTL 111blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1218753689245907899Rat
10059587Bw173Body weight QTL 1733.230.025body mass (VT:0001259)body weight (CMO:0000012)1202069611247069611Rat
2292216Bw80Body weight QTL 803.230.0019body mass (VT:0001259)body weight (CMO:0000012)1213533809243914901Rat
61403Niddm4Non-insulin dependent diabetes mellitus QTL 4blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1206329708222745518Rat
1300168Bp170Blood pressure QTL 1702.76arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1207702246228581766Rat
2292220Bp306Blood pressure QTL 3063.470.00087arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164310393243914901Rat
10059590Kidm44Kidney mass QTL 443.420.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1191033875236033875Rat
1641926Teswt2Testicular weight QTL 22.82testis mass (VT:1000644)both testes wet weight (CMO:0000175)1197697768238755659Rat
2293700Bmd27Bone mineral density QTL 276.60.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1224054293243747962Rat
2293701Bmd34Bone mineral density QTL 348.30.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)1224054293243747962Rat
634340Hcar5Hepatocarcinoma resistance QTL 58liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1214537555226660468Rat
6480786Bw97Body weight QTL 975.03body mass (VT:0001259)body weight (CMO:0000012)1225126575227604520Rat
1581544Rf52Renal function QTL 520.05urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)1232156370259647894Rat
631536Lnnr2Liver neoplastic nodule remodeling QTL 22.90.0005liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)1233948574260522016Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1176426412257976495Rat
7394701Uae46Urinary albumin excretion QTL 463.60.0056urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1201554356246554356Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general autoregulatory indices (AI) were calculated from renal perfusion pressures measured in 20 wk male rats 30 min after a bolus of BSA solution 1579884
qtl_general FHH allele is associated with impaired autoregulation of renal blood flow, autoregulation index of 0.47 for rats homozygous for the FHH peak marker allele 1579884
qtl_map QTL spans 21.8 cM 1579884
qtl_statistics_details MapMaker/Exp, MapMaker/QTL 1579884