Memor15 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Memor15 (Memory QTL 15) Rattus norvegicus

Symbol: Memor15
Name: Memory QTL 15
RGD ID: 1598809
Previously known as: SR-3
Trait: exploratory behavior trait   (VT:0010471)    
Measurement Type: difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase   (CMO:0002678)    
LOD Score: 4.4
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X103,312,877 - 148,312,877RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0X110,957,467 - 155,957,467RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0X122,686,596 - 144,384,190RGDRnor5.0
RGSC_v3.4X9,007,287 - 160,699,376RGDRGSC3.4
RGSC_v3.1X9,012,843 - 160,775,580RGD
Cross Type: intercross
Strains Crossed: SR/JrHsd SS/JrHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain
SR/JrHsd  (IEA)
SS/JrHsd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genome-wide scan for quantitative trait loci influencing spatial navigation and social recognition memory in Dahl rats. Ruiz-Opazo N and Tonkiss J, Physiol Genomics. 2006 Jul 12;26(2):145-51.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1563084Tbc1d8bTBC1 domain family member 8BX103319181103407137Rat
41246354Rps4x-ps12ribosomal protein S4, X-linked, pseudogene 12X103407238103415204Rat
1588264Ripply1ripply transcriptional repressor 1X103436731103440904Rat
1560247Cldn2claudin 2X103459870103473794Rat
1559905Morc4MORC family CW-type zinc finger 4X103477366103529026Rat
41178721Nmd3-ps1NMD3 ribosome export adaptor, pseudogene 1X103548909103550563Rat
6499494Pacsin2-ps1protein kinase C and casein kinase substrate in neurons 2, pseudogene 1X103592017103593460Rat
1590579Rbm41RNA binding motif protein 41X103605732103660381Rat
1564353Nup62clnucleoporin 62 C-terminal likeX103668458103724957Rat
1566312Dnaaf6dynein axonemal assembly factor 6X103724419103775633Rat
41394214LOC120099477small nucleolar RNA SNORA48X103852572103852714Rat
1563753Frmpd3FERM and PDZ domain containing 3X103964168104113864Rat
61955Prps1phosphoribosyl pyrophosphate synthetase 1X104132139104154191Rat
621654Tsc22d3TSC22 domain family, member 3X104217898104277886Rat
1598249Rpl23a-ps9ribosomal protein L23a, pseudogene 9X104318144104318623Rat
1565674Mid2midline 2X104354692104456757Rat
41228863LOC120099415U6 spliceosomal RNAX104370458104370564Rat
40955085Rpsa-ps18ribosomal protein SA, pseudogene 18X104461338104462092Rat
9406132LOC103694504uncharacterized LOC103694504X104462320104535699Rat
1587018Tex13btestis expressed 13BX104490937104511224Rat
41046187LOC120099487small nucleolar RNA SNORA17X104501295104501421Rat
1565570Vsig1V-set and immunoglobulin domain containing 1X104607031104640128Rat
620350Psmd10proteasome 26S subunit, non-ATPase 10X104656809104665122Rat
1596915Atg4aautophagy related 4A, cysteine peptidaseX104665345104765271Rat
1589724Col4a6collagen type IV alpha 6 chainX104766463105117499Rat
1565499Col4a5collagen type IV alpha 5 chainX105118762105322699Rat
1562442Irs4insulin receptor substrate 4X105344020105360004Rat
1583851Gapdh-ps117Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 117X105466456105467608Rat
1566136Rps9l1ribosomal protein S9 like 1X105572159105572766Rat
1595365Phb1-ps20prohibitin 1, pseudogene 20X105595157105596244Rat
41009217Trnav-aac38transfer RNA valine (anticodon AAC) 38X105667790105667864Rat
620439Gucy2fguanylate cyclase 2FX105710356105808183Rat
1560204Nxt2nuclear transport factor 2-like export factor 2X105855616105862902Rat
41134219LOC120099292uncharacterized LOC120099292X105897251105928718Rat
1583501Kcne5potassium voltage-gated channel subfamily E regulatory subunit 5X105930398105931013Rat
69401Acsl4acyl-CoA synthetase long-chain family member 4X105942794106006573Rat
41127291LOC120099501small nucleolar RNA SNORA17X106104376106104501Rat
1563286Tmem164transmembrane protein 164X106288019106448642Rat
2325439Mir652microRNA 652X106343293106343373Rat
1561004Ammecr1AMMECR nuclear protein 1X106465982106571382Rat
6486824Rtl9retrotransposon Gag like 9X106708454106720607Rat
1584679Rps9-ps11ribosomal protein S9, pseudogene 11X106745679106746330Rat
2321164Rps17-ps2ribosomal protein S17, pseudogene 2X106867311106868233Rat
735215Chrdl1chordin-like 1X106889125106992937Rat
3251Pak3p21 (RAC1) activated kinase 3X107116308107374342Rat
70960Capn6calpain 6X107380774107405489Rat
620670DcxdoublecortinX107430767107573612Rat
1566355Cdk11bl1cyclin-dependent kinase 11B like 1X107573678107590244Rat
11468204Hmgb1l2high mobility group box 1 like 2X107671273107672015Rat
1560105Rps19-ps13ribosomal protein S19, pseudogene 13X107697983107698439Rat
7673510Sertm2serine rich and transmembrane domain containing 2X107727772107739795Rat
1564866Hnrnpa1-ps28heterogeneous nuclear ribonucleoprotein A1, pseudogene 28X107752105107759183Rat
1585885Rplp0-ps10ribosomal protein lateral stalk subunit P0, pseudogene 10X107809622107810665Rat
2319323Rps26l5ribosomal protein S26 like 5X107822185107822525Rat
1359416Alg13l1ALG13, UDP-N-acetylglucosaminyltransferase subunit like 1X107885039107906264Rat
619787Trpc5transient receptor potential cation channel, subfamily C, member 5X107946163108230991Rat
41197927LOC120099544U2 spliceosomal RNAX107988410107988589Rat
6503255Trpc5osTRPC5 opposite strandX108025172108044201Rat
11468725LOC108349245ribosome biogenesis protein NSA2 homolog pseudogeneX108116385108117264Rat
1588188Rtl4retrotransposon Gag like 4X108231052108641768Rat
41401096LOC120099495small nucleolar RNA SNORA17X108436348108436479Rat
1588178Ube2l3-ps1ubiquitin-conjugating enzyme E2L 3, pseudogene 1X108608117108608932Rat
41086782LOC120099263uncharacterized LOC120099263X108678823108701907Rat
1563295Trirlntelomerase RNA component interacting Rnase like ncrnaX108794365108795038Rat
727927Lhfpl1LHFPL tetraspan subfamily member 1X108815596108873460Rat
1564027AmotangiomotinX108982399109041265Rat
1588241LOC680725similar to prohibitinX109377891109378863Rat
41087468LOC120099434U7 small nuclear RNAX109520306109520359Rat
1584897Eif4b-ps3eukaryotic translation initiation factor 4B, pseudogene 3X109595488109597454Rat
1586013Actg1-ps2actin, gamma 1, pseudogene 2X109619907109621911Rat
41301363LOC120099466U11 spliceosomal RNAX109679057109679190Rat
1589747Hsp90aa1-ps6heat shock protein 90 alpha family class A member 1, pseudogene 6X110207305110214134Rat
41083924Ppih-ps1peptidylprolyl isomerase H, pseudogene 1X110290281110293522Rat
2324302Mrpl15-ps2mitochondrial ribosomal protein L15, pseudogene 2X110292959110298026Rat
1333338Olr1752-psolfactory receptor pseudogene 1752X110437444110437620Rat
1598351Ppid-ps20peptidylprolyl isomerase D, pseudogene 20X110524551110525661Rat
2848Htr2c5-hydroxytryptamine receptor 2CX110640777110870288Rat
40929687Snora35small nucleolar RNA, H/ACA box 35X110671942110672069Rat
4888609Mir3552microRNA 3552X110676724110676828Rat
2325352Mir764microRNA 764X110678597110678704Rat
4888584Mir1912microRNA 1912X110685978110686065Rat
7489010Mir1298microRNA 1298X110744907110745045Rat
2325372Mir448microRNA 448X110829918110830029Rat
7658474Nr5a2-ps1nuclear receptor subfamily 5, group A, member 2, pseudogene 1X110903809110905163Rat
620838Il13ra2interleukin 13 receptor subunit alpha 2X111002590111074053Rat
1590569Lrch2leucine rich repeats and calponin homology domain containing 2X111091728111174225Rat
41266373Snora35bsmall nucleolar RNA, H/ACA box 35BX111101754111101882Rat
1584898Luzp4leucine zipper protein 4X111280490111321363Rat
1590643Hnrnpm-ps2heterogeneous nuclear ribonucleoprotein M, pseudogene 2X111324802111327221Rat
1598343Npm1-ps9nucleophosmin 1, pseudogene 9X111554751111557418Rat
41206828LOC120099514small nucleolar RNA SNORA40X111573914111574039Rat
621409Pls3plastin 3X111589193111683908Rat
2320301Hint1-ps3histidine triad nucleotide binding protein 1, pseudogene 3X111799148111800089Rat
1589746Ndufaf4-ps4NADH:ubiquinone oxidoreductase complex assembly factor 4, pseudogene 4X111803082111805851Rat
6493681LOC100911253uncharacterized LOC100911253X111829130111944986Rat
41271583LOC120099355uncharacterized LOC120099355X111831770111837168Rat
41011122Pcbp2-ps3poly(rC) binding protein 2, pseudogene 3X111843404111847096Rat
41367602LOC120099534U2 spliceosomal RNAX111874817111874960Rat
1584899Ndufaf4-ps6NADH:ubiquinone oxidoreductase complex assembly factor 4, pseudogene 6X111888462111890563Rat
41122277LOC120099356uncharacterized LOC120099356X111913034111918433Rat
41292304Pcbp2-ps5poly(rC) binding protein 2, pseudogene 5X111924205111927837Rat
1586014Pcbp2-ps10poly(rC) binding protein 2, pseudogene 10X111934105111936526Rat
41113214Pcbp2-ps4poly(rC) binding protein 2, pseudogene 4X111940034111943599Rat
41384159LOC120099427U6 spliceosomal RNAX111958839111958897Rat
2072Agtr2angiotensin II receptor, type 2X112119876112124060Rat
41330088LOC120099493small nucleolar RNA SNORA17X112132302112132432Rat
2323032Sord-ps1sorbitol dehydrogenase, pseudogene 1X112248482112249885Rat
1561810Slc6a14solute carrier family 6 member 14X112314643112375412Rat
41365780LOC120099391U6 spliceosomal RNAX112716579112716685Rat
2323188Sinhcaf-ps2SIN3-HDAC complex associated factor, pseudogene 2X112739910112743858Rat
1583914Ppp1cc-ps2protein phosphatase 1 catalytic subunit gamma, pseudogene 2X112812252112814475Rat
41403101C1h9orf85-ps2similar to human chromosome 9 open reading frame 85, pseudogene 2X112816111112816567Rat
6489572Ppp1r2-ps2protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 2X113070197113072903Rat
1562281Eif5-ps6eukaryotic translation initiation factor 5, pseudogene 6X113216161113217667Rat
1584907G3bp1-ps5G3BP stress granule assembly factor 1, pseudogene 5X113416013113418436Rat
2324557Sec61g-ps4Sec61 translocon subunit gamma, pseudogene 4X113427370113427696Rat
40933887Rps26-ps7ribosomal protein S26, pseudogene 7X113601665113609965Rat
11454080LOC108349247uncharacterized LOC108349247X113934651113951129Rat
1559646Klhl13kelch-like family member 13X113942309114107299Rat
11478890LOC108349193glyceraldehyde-3-phosphate dehydrogenase pseudogeneX114319412114321561Rat
41046912LOC120099301uncharacterized LOC120099301X114425480114471782Rat
727965Wdr44WD repeat domain 44X114481890114587307Rat
9081780LOC103690899histidine triad nucleotide-binding protein 1 pseudogeneX114629601114636435Rat
41130514LOC120099418U6 spliceosomal RNAX114663691114663792Rat
1305365Tesltestis derived transcript-likeX114680227114693795Rat
1566184Tesl1testin LIM domain protein like 1X114757064114815923Rat
1590912Tesl-ps1testis derived transcript-like, pseudogene 1X114872762114873984Rat
1566387Tesl2testin LIM domain protein like 2X114972836115005286Rat
7650932LOC102553553uncharacterized LOC102553553X115025996115030878Rat
41185184LOC120099448small Cajal body-specific RNA 13X115087944115088214Rat
1594344Rps15-ps3ribosomal protein S15, pseudogene 3X115101013115101602Rat
1564707Dock11dedicator of cytokinesis 11X115131720115314854Rat
628741Il13ra1interleukin 13 receptor subunit alpha 1X115348822115408682Rat
1359439Zcchc12zinc finger CCHC-type containing 12X115433444115436691Rat
1565451Lonrf3LON peptidase N-terminal domain and ring finger 3X115565214115603886Rat
41183603LOC120099417U6 spliceosomal RNAX115600746115600818Rat
1561445Kiaa1210KIAA1210 homologX115675412115725950Rat
70890Pgrmc1progesterone receptor membrane component 1X115832865115841060Rat
1566363Akap17bA kinase (PRKA) anchor protein 17BX115843263115881597Rat
41388056LOC120099476small nucleolar RNA SNORA48X115916685115916825Rat
1565032Elobl6elongin B like 6X115936938115937292Rat
2319295Mrpl30-ps4mitochondrial ribosomal protein L30, pseudogene 4X115956680115957166Rat
1559928Slc25a43solute carrier family 25, member 43X115977437116011789Rat
41149933LOC120099459small nucleolar RNA SNORA1X116020859116020995Rat
1585073Bcas2-ps1BCAS2, pre-mRNA processing factor, pseudogene 1X116026387116027059Rat
41341586Trnap-agg76transfer RNA proline (anticodon AGG) 76X116027434116027514Rat
620353Slc25a5solute carrier family 25 member 5X116031896116034963Rat
1564541Steep1STING1 ER exit protein 1X116087626116114159Rat
1359534Ube2aubiquitin-conjugating enzyme E2AX116114339116125076Rat
6500424NkrfNFKB repressing factorX116126341116144554Rat
1585082Septin6septin 6X116153255116230334Rat
1563086Sowahdsosondowah ankyrin repeat domain family member DX116292030116293660Rat
3593Rpl39ribosomal protein L39X116327216116330211Rat
1560264Upf3bUPF3B, regulator of nonsense mediated mRNA decayX116335308116353332Rat
1565955NkapNFKB activating proteinX116373031116392677Rat
708510Akap14A-kinase anchoring protein 14X116395512116410697Rat
1560955Ndufa1NADH:ubiquinone oxidoreductase subunit A1X116424223116427875Rat
1359693Rnf113a1ring finger protein 113A1X116427941116429164Rat
1560927Rhoxlreproductive homeobox likeX116442675116444106Rat
1565307Rhox4greproductive homeobox 4GX116472094116477855Rat
2301305Rhox3reproductive homeobox on X chromosome 3X116482945116487394Rat
1588607Rhoxf2bRhox homeobox family member 2BX116507488116514240Rat
3295Rhox5Rhox homeobox family member 5X116536207116541972Rat
2321855Rhox9l1reproductive homeobox 9 like 1X116560244116562636Rat
41146938LOC120099169keratinocyte proline-rich protein-likeX116572842116577387Rat
1561047Rhox8reproductive homeobox 8X116584742116588365Rat
41078949Ift52-ps1intraflagellar transport 52, pseudogene 1X116594807116598029Rat
1563189Rhox7Rhox homeobox family member 7X116627645116635721Rat
1563844Rhox9reproductive homeobox 9X116641863116644714Rat
11373868Ormdl1-ps4ORMDL sphingolipid biosynthesis regulator 1, pseudogene 4X116664953116666436Rat
1586238Crls1-ps2cardiolipin synthase 1, pseudogene 2X116677939116679090Rat
1586239Shox1SHOX homeobox 1X116688163116695111Rat
1586244Crls1-ps1cardiolipin synthase 1, pseudogene 1X116707078116712324Rat
1563150Btg1cBTG anti-proliferation factor 1CX116749728116754643Rat
1566035Ptp4a1l1protein tyrosine phosphatase 4A1 like 1X116789584116790544Rat
1598239Btg1bBTG anti-proliferation factor 1BX116794228116805478Rat
1563291Rhox10reproductive homeobox 10X116850407116854953Rat
1564332Rhox11Rhox homeobox family member 11X116871656116880123Rat
1563789Rhox12Rhox homeobox family member 12X116890562116897981Rat
1586264Rhox13Rhox homeobox family member 13X116911226116917758Rat
40975408LOC120099475small nucleolar RNA SNORA48X116931587116931725Rat
1566309Zbtb33zinc finger and BTB domain containing 33X116963337116970547Rat
727788Tmem255atransmembrane protein 255AX116970793117035008Rat
620994Atp1b4ATPase Na+/K+ transporting family member beta 4X117087284117108023Rat
2322721Tex13c3TEX13 family member C3X117151627117153132Rat
2990Lamp2lysosomal-associated membrane protein 2X117173097117222090Rat
1564494Cul4bcullin 4BX117287481117326688Rat
1566390Mcts1MCTS1, re-initiation and release factorX117350723117362504Rat
1311230C1galt1c1C1GALT1-specific chaperone 1X117378123117382620Rat
41355609LOC120099489small nucleolar RNA SNORA17X117548920117549051Rat
15862896030498E09RiklRIKEN cDNA 6030498E09 gene likeX117556991117756327Rat
1560124Rpl10al2ribosomal protein L10A like 2X117620592117621326Rat
7663400Gapdh-ps83Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 83X118185012118206590Rat
11391862LOC10834919560S ribosomal protein L7a pseudogeneX118279924118280718Rat
41338750LOC120099282cysteine-rich perinuclear theca protein 1-likeX118533863118534605Rat
1586045Fh-ps2fumarate hydratase, pseudogene 2X118692571118694745Rat
2323548Tubg1-ps3tubulin, gamma 1, pseudogene 3X119455925119456663Rat
1593267Mcfd2-ps1multiple coagulation factor deficiency 2, pseudogene 1X119699856119700275Rat
6489636Zpr1-ps1ZPR1 zinc finger, pseudogene 1X119774008119781347Rat
41388172Rps27-ps5ribosomal protein S27, pseudogene 5X120201439120201694Rat
70958Gria3glutamate ionotropic receptor AMPA type subunit 3X120238515120504106Rat
1596967Eif3k-ps2eukaryotic translation initiation factor 3, subunit K, pseudogene 2X120567963120568598Rat
1561623Thoc2THO complex subunit 2X120634966120749569Rat
41270159Thoc2-ps1THO complex 2, pseudogene 1X120637118120638167Rat
1587436LOC691151similar to 40S ribosomal protein S2X120749512120753948Rat
620692XiapX-linked inhibitor of apoptosisX120890537120938413Rat
1562042Stag2STAG2 cohesin complex componentX120974687121105677Rat
1560119Actb-ps6actin, beta, pseudogene 6X121159206121162455Rat
41370240LOC120099528U2 spliceosomal RNAX121161958121162061Rat
41146332Trnas-aga20transfer RNA serine (anticodon AGA) 20X121251163121251237Rat
2324802Ebag9-ps1estrogen receptor binding site associated, antigen, 9, pseudogene 1X121289238121289878Rat
1562408Sh2d1aSH2 domain containing 1AX121373693121401923Rat
1561678Tenm1teneurin transmembrane protein 1X121400466122289877Rat
41185080LOC120099499small nucleolar RNA SNORA17X121544402121544533Rat
11359441LOC10834925260S ribosomal protein L23 pseudogeneX121754412121754975Rat
2321936Mrps36l1mitochondrial ribosomal protein S36 like 1X122467665122467913Rat
1563975Tex13cTEX13 family member CX122469125122471627Rat
2322526Rangrf-ps2RAN guanine nucleotide release factor, pseudogene 2X122505315122506003Rat
41041398LOC120099550U4 spliceosomal RNAX123006992123007124Rat
1588662Hmgb4l5high-mobility group box 4 like 5X123264998123265711Rat
1560768Dcaf12l2DDB1 and CUL4 associated factor 12-like 2X123293761123296550Rat
1563873Dcaf12l1DDB1 and CUL4 associated factor 12-like 1X123695286123698905Rat
41378756Sec13-ps1SEC13 homolog, nuclear pore and COPII coat complex component, pseudogene 1X123733294123742416Rat
2322277Sfpq-ps2splicing factor proline and glutamine rich, pseudogene 2X123861955123865635Rat
41130542Ormdl1-ps9ORMDL sphingolipid biosynthesis regulator 1, pseudogene 9X123925106123930062Rat
1583341Prr32proline rich 32X123978010123979928Rat
1597157Hspa8-ps4heat shock protein family A (Hsp70) member 8, pseudogene 4X124067885124069814Rat
41284281Hsp90ab1-ps14heat shock protein 90 alpha family class B member 1, pseudogene 14X124335515124337028Rat
7506435LOC102555213uncharacterized LOC102555213X124466651124468789Rat
41041497Fundc2-ps2FUN14 domain containing 2, pseudogene 2X124496808124497966Rat
1584677Hmgb4l2high-mobility group box 4 like 2X124788553124789270Rat
1594337Hmgb4-ps2high-mobility group box 4, pseudogene 2X124791570124792075Rat
6502223Gapdh-ps37Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 37X124869932124870723Rat
1566129Dmtf1-ps2cyclin D binding myb-like transcription factor 1, pseudogene 2X124880957124888417Rat
1594336Ldha-ps14lactate dehydrogenase A, pseudogene 14X124938528124939351Rat
1598248Gapdh-ps16Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 16X124948493124949499Rat
7611199LOC102550812uncharacterized LOC102550812X125223196125303856Rat
40983609LOC120099404U6 spliceosomal RNAX125329941125330045Rat
41325721LOC120099203uncharacterized LOC120099203X125508395125647104Rat
1359559Actrt1actin-related protein T1X125584102125585455Rat
1563524Hspd1-ps21heat shock protein family D (Hsp60) member 1, pseudogene 21X125679740125680618Rat
11417755Ndufa4-ps1Ndufa4, mitochondrial complex associated, pseudogene 1X126399588126399833Rat
7669826Crb1-ps1crumbs cell polarity complex component 1, pseudogene 1X126583668126588654Rat
1565430Hmgb4-ps5high-mobility group box 4, pseudogene 5X126731922126732399Rat
41093266LOC120093120high mobility group protein B4-likeX126735457126736002Rat
1596788Cxxc5l1CXXC finger protein 5 like 1X126891110126892526Rat
1583847Btbd10-ps1BTB domain containing 10, pseudogene 1X126904676126906513Rat
11518088LOC108349199glyceraldehyde-3-phosphate dehydrogenase pseudogeneX126965477126966448Rat
1561046Smarca1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1X126980201127066385Rat
1596721Kpna1-ps7karyopherin subunit alpha 1, pseudogene 7X127072965127074744Rat
1594526OcrlOCRL, inositol polyphosphate-5-phosphataseX127089508127140362Rat
620672AplnapelinX127180801127213567Rat
621277Xpnpep2X-prolyl aminopeptidase 2X127287765127317036Rat
1560293Sash3SAM and SH3 domain containing 3X127326815127341521Rat
1561389Zdhhc9zinc finger DHHC-type palmitoyltransferase 9X127352340127388245Rat
11518134LOC108353282glyceraldehyde-3-phosphate dehydrogenase pseudogeneX127421637127422622Rat
1359313Utp14aUTP14A small subunit processome componentX127439282127464634Rat
41012133LOC120099421U6 spliceosomal RNAX127487350127487446Rat
1566108Bcorl1BCL6 co-repressor-like 1X127516504127584529Rat
41081948Ndufb4-ps3NADH:ubiquinone oxidoreductase subunit B4, pseudogene 3X127554839127557892Rat
1560743Elf4E74 like ETS transcription factor 4X127587401127639063Rat
620817Aifm1apoptosis inducing factor, mitochondria associated 1X127650223127689356Rat
1563280Rab33aRAB33A, member RAS oncogene familyX127694219127706378Rat
1564669Zfp280czinc finger protein 280CX127716403127807600Rat
621433Slc25a14solute carrier family 25 member 14X127807630127845823Rat
727808Gpr119G protein-coupled receptor 119X127852145127858198Rat
1562693Rbmx2RNA binding motif protein, X-linked 2X127888514127896239Rat
1583846Gys1-ps2glycogen synthase 1, pseudogene 2X127918793127920680Rat
6498130Npm1-ps20nucleophosmin 1, pseudogene 20X127960832127968169Rat
41227588LOC120099519small nucleolar RNA SNORA26X127999183127999303Rat
1584861Hnrnpa1-ps49heterogeneous nuclear ribonucleoprotein A1, pseudogene 49X128002204128003535Rat
1564955Fsip2l1fibrous sheath-interacting protein 2 like 1X128076772128109233Rat
1563643Enox2ecto-NOX disulfide-thiol exchanger 2X128270941128593074Rat
1565967Arhgap36Rho GTPase activating protein 36X128780148128787169Rat
41204737LOC120099272high mobility group protein B4-likeX128868498128869190Rat
1332660Or11q2olfactory receptor family 11 subfamily Q member 2X128992754128993913Rat
1334403Or5o1olfactory receptor family 5 subfamily O member 1X129014048129014986Rat
631402Igsf1immunoglobulin superfamily, member 1X129069891129085331Rat
1332669Or11n2olfactory receptor family 11 subfamily N member 2X129169388129170320Rat
1334384Or5bh3olfactory receptor family 5 subfamily BH member 3X129289761129290684Rat
1566225Hmgb4l8high-mobility group box 4 like 8X129470473129471169Rat
2324261Srsf7-ps2serine and arginine rich splicing factor 7, pseudogene 2X129741370129742631Rat
41304628LOC120099488small nucleolar RNA SNORA17X129753052129753183Rat
1333608Or1aa2olfactory receptor family 1 subfamily AA member 2X129757182129758120Rat
9145805LOC103694587high mobility group protein B4-likeX130143801130144494Rat
1563568Stk26serine/threonine kinase 26X130325064130375674Rat
1562057Frmd7FERM domain containing 7X130375925130423836Rat
1588562Rap2cRAP2C, member of RAS oncogene familyX130504554130517671Rat
6491579Atp5f1c-ps2ATP synthase F1 subunit gamma, pseudogene 2X130540508130544705Rat
1565834Mbnl3muscleblind-like splicing regulator 3X130641942130737179Rat
41240019LOC120099481small nucleolar RNA SNORA48X130775533130775672Rat
11427469LOC108352140high mobility group protein B4-likeX130942850130943537Rat
1564397Hs6st2heparan sulfate 6-O-sulfotransferase 2X130966547131261629Rat
41287397Mrpl30-ps3mitochondrial ribosomal protein L30, pseudogene 3X131057674131123323Rat
40981226Chchd3-ps1coiled-coil-helix-coiled-coil-helix domain containing 3, pseudogene 1X131314718131319739Rat
1563443Usp26ubiquitin specific peptidase 26X131317200131363964Rat
1561901Magea14MAGE family member A14X131542773131546613Rat
1359399Gpc4glypican 4X131644711131755349Rat
1561055Ftl1l1ferritin light chain 1 like 1X131765928131766840Rat
1598247Rpl7-ps10ribosomal protein L7, pseudogene 10X131801463131802203Rat
40992710LOC120099376uncharacterized LOC120099376X131866965131925528Rat
2725Gpc3glypican 3X131868986132236824Rat
40943345LOC120099554U6 spliceosomal RNAX131991651131991757Rat
2325446Mir363microRNA 363X132421791132421877Rat
2325583Mir92a2microRNA 92a-2X132421942132422033Rat
2325599Mir19b2microRNA 19b-2X132422072132422167Rat
2325420Mir20bmicroRNA 20bX132422211132422282Rat
2325506Mir106amicroRNA 106aX132422584132422661Rat
40969381LOC120099255high mobility group protein B4-likeX132449891132450601Rat
1597791Ccdc160coiled-coil domain containing 160X132468141132478616Rat
41053422Trnav-aac9transfer RNA valine (anticodon AAC) 9X132606225132606299Rat
41298450Pou5f1-ps2POU class 5 homeobox 1, pseudogene 2X132624801132626269Rat
2323526Phf6PHD finger protein 6X132656658132699720Rat
2320188Hmgb4l1high-mobility group box 4 like 1X132703106132703824Rat
2826Hprt1hypoxanthine phosphoribosyltransferase 1X132736175132768149Rat
2325535Mir450a1microRNA 450a-1X132801380132801470Rat
14398596Mir450b-1microRNA mir-450b-1X132801525132801593Rat
2325422Mir542microRNA 542X132802623132802701Rat
2325338Mir351microRNA 351X132805563132805643Rat
2325516Mir503microRNA 503X132806303132806373Rat
2325467Mir322microRNA 322X132806594132806688Rat
1563777Plac1placenta enriched 1X132821347132955143Rat
1560129Pabir2PABIR family member 2X132989124133015625Rat
1590266Pabir3PABIR family member 3X133020162133083801Rat
1359486Mospd1motile sperm domain containing 1X133100200133127960Rat
1305249Snrpe-ps1small nuclear ribonucleoprotein polypeptide E, pseudogene 1X133163150133163576Rat
40982935Etdcembryonic testis differentiation homolog CX133223810133233159Rat
41031103Tma7-ps2translation machinery associated 7 homolog, pseudogene 2X133251419133251829Rat
41111313LOC120099214uncharacterized LOC120099214X133266846133276397Rat
41113568LOC120099259cancer/testis antigen 55-likeX133346508133353120Rat
41232192LOC120099390U6 spliceosomal RNAX133395235133395341Rat
1593086Rtl8aretrotransposon Gag like 8AX133414027133415240Rat
2322607Cep83l1centrosomal protein 83 like 1X133428069133430845Rat
64987584933416I08RiklRIKEN cDNA 4933416I08 gene likeX133464033133470551Rat
7724551LOC102550394uncharacterized LOC102550394X133475953133495771Rat
1560456Ct55cancer/testis antigen 55X133502545133515730Rat
2322060Fam9bfamily with sequence similarity 9, member BX133519542133531868Rat
11444048LOC108349174heterogeneous nuclear ribonucleoprotein A1 pseudogeneX133546705133547990Rat
1559581Zfp36l3zinc finger protein 36, C3H type-like 3X133550348133553677Rat
15648453830403N18RiklRIKEN cDNA 3830403N18 gene likeX133561127133574507Rat
41195353LOC120099189cancer/testis antigen 55-likeX133675275133686790Rat
41318334LOC120099191cancer/testis antigen 55-likeX133692711133709349Rat
41360898LOC120099192uncharacterized LOC120099192X133723548133726977Rat
2322455Ct55l1cancer/testis antigen 55 like 1X133754358133765931Rat
41286332LOC120099248uncharacterized LOC120099248X133770808133779325Rat
40947786LOC120099287cancer/testis antigen 55-likeX133791523133815392Rat
41122630LOC120099315uncharacterized LOC120099315X133820662133835679Rat
40937392LOC120099270uncharacterized LOC120099270X133853071133859654Rat
1563270Sycp3l2synaptonemal complex protein 3 like 2X133857772133871791Rat
2322505Clns1a-ps1chloride nucleotide-sensitive channel 1A, pseudogene 1X133878251133881490Rat
1590178Ct55l2cancer/testis antigen 55 like 2X133882119133890487Rat
1584423Zfp75dzinc finger protein 75DX134035116134053765Rat
1584453Zfp449zinc finger protein 449X134120820134140921Rat
41152601LOC120099129uncharacterized LOC120099129X134141038134151302Rat
41047538LOC120099410U6 spliceosomal RNAX134157904134158009Rat
1561558Hmgb4l9high-mobility group box 4 like 9X134184390134185772Rat
1592872Ints6lintegrator complex subunit 6 likeX134258117134325706Rat
1592859Ct45a9cancer/testis antigen family 45 member A9X134345175134355174Rat
1566339Mmgt1membrane magnesium transporter 1X134408463134420798Rat
1563582Slc9a6solute carrier family 9 member A6X134430677134486747Rat
41184806Btf3-ps4basic transcription factor 3, pseudogene 4X134537822134538517Rat
2615Fhl1four and a half LIM domains 1X134555399134614930Rat
41329173LOC120099414U6 spliceosomal RNAX134571259134571364Rat
1565514Map7d3MAP7 domain containing 3X134619227134647525Rat
1564057Adgrg4adhesion G protein-coupled receptor G4X134734610134864449Rat
628645Brs3bombesin receptor subtype 3X134906817134932321Rat
1563377Htatsf1HIV-1 Tat specific factor 1X134935426134949607Rat
41182025Hmgn4-ps5high mobility group nucleosomal binding domain 4, pseudogene 5X134940799134941081Rat
1564038Vgll1vestigial-like family member 1X134979657134996007Rat
1598244Hsp90ab1-ps15heat shock protein 90 alpha family class B member 1, pseudogene 15X135024943135027698Rat
708418Cd40lgCD40 ligandX135127052135138768Rat
1359674Arhgef6Rac/Cdc42 guanine nucleotide exchange factor 6X135145447135264636Rat
1565256RbmxRNA binding motif protein, X-linkedX135305237135314806Rat
40982944Snord61small nucleolar RNA, C/D box 61X135313247135313319Rat
1596894Tm9sf2-ps1transmembrane 9 superfamily member 2, pseudogene 1X135462751135497336Rat
1564196Gpr101G protein-coupled receptor 101X135540042135543958Rat
1566008Hmgb4l7high-mobility group box 4 like 7X135622322135623034Rat
41360768LOC120099250U1 small nuclear ribonucleoprotein C-likeX135673708135678865Rat
41191688Rpl18-ps13ribosomal protein L18, pseudogene 13X135789332135832927Rat
1598243Rpl27-ps6ribosomal protein L27, pseudogene 6X136090643136091029Rat
1561261Zic3Zic family member 3X136123662136129627Rat
1586454Hmgb4-ps3high-mobility group box 4, pseudogene 3X136154076136154621Rat
11417756LOC108349258high mobility group protein B4-likeX136290250136290937Rat
2321147Atp5f1b-ps1ATP synthase F1 subunit beta, pseudogene 1X136361979136362619Rat
1564167Btf3-ps11basic transcription factor 3, pseudogene 11X136385147136385621Rat
40974168LOC120099402U6 spliceosomal RNAX136489271136489377Rat
1585304Hmgb4l4high-mobility group box 4 like 4X136825997136826693Rat
1359246Magea13MAGE family member A13X137070707137076566Rat
620164Fgf13fibroblast growth factor 13X137276498137800056Rat
2325482Mir504microRNA 504X137318540137318616Rat
41229816LOC120099243high mobility group protein B4-likeX137565511137566102Rat
1585248Ptp4a1l3protein tyrosine phosphatase 4A1 like 3X137876096137876672Rat
2320902Sypl1-ps1synaptophysin-like 1, pseudogene 1X138145492138146285Rat
2589F9coagulation factor IXX138352334138396835Rat
1566098Mcf2MCF.2 cell line derived transforming sequenceX138414077138514828Rat
1564481Atp11cATPase phospholipid transporting 11CX138564459138752116Rat
4888571Mir3589microRNA 3589X138742465138742576Rat
2325515Mir505microRNA 505X138742487138742553Rat
1584124Cxhxorf66similar to human chromosome X open reading frame 66X138779374138819595Rat
1560171Hapstr2HUWE1 associated protein modifying stress responses 2X138922089138924124Rat
1560585Hmgb4l6high-mobility group box 4 like 6X139274749139275452Rat
1591839Sox3SRY-box transcription factor 3X139308608139310687Rat
1582974Esrrb-ps1estrogen-related receptor beta, pseudogene 1X139508700139509825Rat
1561327Magec2l1MAGE family member C2 like 1X139529048139710648Rat
41271235LOC120099423U6 spliceosomal RNAX139663649139663750Rat
1598242Vdac1-ps9voltage-dependent anion channel 1, pseudogene 9X139670709139671569Rat
1582942Dtx2-ps1deltex homolog 2 (Drosophila), pseudogene 1X139675169139680751Rat
1582915Rpsa-ps27ribosomal protein SA, pseudogene 27X139848861139851502Rat
1598241Tpm3-ps1tropomyosin 3, pseudogene 1X139891089139894903Rat
1565644Ldoc1LDOC1, regulator of NFKB signalingX139965509140074355Rat
1583844Rrp12-ps1ribosomal RNA processing 12, pseudogene 1X140045052140052767Rat
1563272Magec2MAGE family member C2X140610610140615484Rat
7677568LOC102546822uncharacterized LOC102546822X140885547140899003Rat
1583845Actg1-ps8actin, gamma 1, pseudogene 8X141089014141090369Rat
41174212LOC120099397U6 spliceosomal RNAX141113775141113881Rat
1596189Ndufv2-ps1NADH:ubiquinone oxidoreductase core subunit V2, pseudogene 1X141292419141293051Rat
1565692Suv39h1-ps1SUV39H1 histone lysine methyltransferase, pseudogene 1X141792589141795257Rat
6498897Eif3e-ps2eukaryotic translation initiation factor 3 subunit E, pseudogene 2X142444787142446098Rat
6498529Rplp0-ps11ribosomal protein lateral stalk subunit P0, pseudogene 11X142476514142477486Rat
1565494Magea9MAGE family member A9X142619282142624654Rat
1588563Slitrk4SLIT and NTRK-like family, member 4X142706495142718968Rat
6495215Nop2-ps1NOP2 nucleolar protein, pseudogene 1X142993210142997694Rat
11475262LOC108349202glyceraldehyde-3-phosphate dehydrogenase pseudogeneX143320389143321407Rat
2318935Dcaf13-ps1DDB1- and CUL4-associated factor 13, pseudogene 1X143382660143384002Rat
1561702Ctag2cancer/testis antigen 2X143531907143533201Rat
41158935Trnaa-agc56transfer RNA alanine (anticodon AGC) 56X144291735144291816Rat
41175521LOC120099407U6 spliceosomal RNAX144682339144682457Rat
41250482LOC120099343uncharacterized LOC120099343X144879843144880749Rat
1593525Dppa4-ps6developmental pluripotency-associated 4, pseudogene 6X144946918144947664Rat
1561361Slitrk2SLIT and NTRK-like family, member 2X145246448145259983Rat
41082672LOC120099202uncharacterized LOC120099202X145395235145425397Rat
2325490Mir743amicroRNA 743aX145402692145402767Rat
2325444Mir743bmicroRNA 743bX145403182145403258Rat
2325491Mir742microRNA 742X145410176145410252Rat
2325508Mir883microRNA 883X145410566145410642Rat
2325497Mir471microRNA 471X145421500145421577Rat
4888564Mir3551microRNA 3551X145422221145422302Rat
4888567Mir741microRNA 741X145423753145423848Rat
2325498Mir463microRNA 463X145425426145425503Rat
11488394LOC108349259uncharacterized LOC108349259X145425526145449009Rat
2325342Mir880microRNA 880X145431384145431461Rat
2325509Mir878microRNA 878X145432857145432933Rat
2325419Mir881microRNA 881X145433306145433382Rat
2325512Mir871microRNA 871X145437183145437259Rat
4888539Mir3580microRNA 3580X145445018145445098Rat
2325339Mir465microRNA 465X145446770145446846Rat
2318749Rpl10-ps4ribosomal protein L10, pseudogene 4X145734976145735664Rat
1593468Ell2l1elongation factor for RNA polymerase II 2 like 1X145878600145888249Rat
2318564Ppp3cb-ps1protein phosphatase 3 catalytic subunit beta, pseudogene 1X145949639145951105Rat
41069880LOC120099512small nucleolar RNA SNORA17X146092924146093007Rat
41313138LOC120099527U6atac minor spliceosomal RNAX146115931146116052Rat
6488326Fam9cl1family with sequence similarity 9, member C like 1X146218106146237824Rat
6487554Fam9cfamily with sequence similarity 9, member CX146236386146256079Rat
2318325Tor1aip2-ps1torsin 1A interacting protein 2, pseudogene 1X146278319146302781Rat
1565338Vdac1-ps3voltage-dependent anion channel 1, pseudogene 3X146382712146384480Rat
114951734933436I01RiklRIKEN cDNA 4933436I01 gene likeX146589314146591696Rat
4888578Mir3585microRNA 3585X146662031146662148Rat
2325476Mir201microRNA 201X146667106146667185Rat
2325473Mir547microRNA 547X146667404146667484Rat
7489026Mir509microRNA 509X146688132146688216Rat
2318128Scoc-ps1short coiled-coil protein, pseudogene 1X146989801146990112Rat
40989803LOC120099504small nucleolar RNA SNORA17X147121405147121505Rat
1592296Slc25a15-ps1solute carrier family 25 member 15, pseudogene 1X147183874147186518Rat
1592282Adrm1-ps2ADRM1 26S proteasome ubiquitin receptor, pseudogene 2X147226579147230411Rat
1597183Hnrnph1-ps3heterogeneous nuclear ribonucleoprotein H1, pseudogene 3X147232570147237507Rat
2623Fmr1fragile X messenger ribonucleoprotein 1X147240239147278057Rat
1564059Fmr1nbFMR1 neighborX147309613147332426Rat
15899781700020N15RiklRIKEN cDNA 1700020N15 gene likeX147419923147420604Rat
1591096Nip7-ps14nucleolar pre-rRNA processing protein NIP7, pseudogene 14X147645990147646564Rat
1565592Aff2ALF transcription elongation factor 2X147928130148432484Rat
9372497LOC103694526uncharacterized LOC103694526X146743750146898115Rat
9343299LOC10369088860S ribosomal protein L10a-likeX104902239104902979Rat
9146728Rpl39l2ribosomal protein L39 like 2X106046331106046530Rat
41209783LOC120099535U2 spliceosomal RNAX106435897106435976Rat
11453602Alg13ALG13, UDP-N-acetylglucosaminyltransferase subunitX107906320107968232Rat
41206460LOC120099378uncharacterized LOC120099378X111708629111782670Rat
40954503Ube2wl1ubiquitin-conjugating enzyme E2W like 1X111787266111794068Rat
9214037LOC103690768histidine triad nucleotide-binding protein 1 pseudogeneX111887970111888349Rat
9345774LOC103690894uncharacterized LOC103690894X114922993114939876Rat
7519078Ct47b1cancer/testis antigen family 47, member B1X115651472115655191Rat
41385866LOC120099452small nucleolar RNA SNORA36 familyX116009779116009910Rat
41331878LOC120099449small nucleolar RNA SNORA69X116327776116327909Rat
41354497LOC120099455small nucleolar RNA SNORA42/SNORA80 familyX117874309117874425Rat
11409794Actg1-ps5actin, gamma 1, pseudogene 5X117902835117903594Rat
7642968Ldha-ps23lactate dehydrogenase A, pseudogene 23X122549678122552543Rat
41383546LOC120099269uncharacterized LOC120099269X124406821124447609Rat
9082754LOC103690083uncharacterized LOC103690083X130001844130069421Rat
7752647LOC102550607uncharacterized LOC102550607X131546740131727188Rat
9317736LOC103690904high mobility group protein B4-likeX131862544131863238Rat
41052230LOC120099395U6 spliceosomal RNAX132706378132706481Rat
7528448LOC102550366uncharacterized LOC102550366X132805407132809653Rat
41153163LOC120099188cancer/testis antigen 55-likeX133589642133602900Rat
41180249LOC120099190cancer/testis antigen 55-likeX133631948133643916Rat
9296500Smim10l2asmall integral membrane protein 10 like 2AX134151325134154647Rat
7730159Spanxn4lSPANX family, member N4 likeX140185366140255965Rat
4145145Prkar1a-ps1protein kinase, cAMP dependent regulatory, type I, alpha, pseudogene 1X141340329141340583Rat
7722198LOC10254727560S ribosomal protein L21-likeX141669916141670224Rat
40971688LOC120099529U2 spliceosomal RNAX144268483144268678Rat
41364990LOC120099347ubiquitin carboxyl-terminal hydrolase puf-likeX144385855144386558Rat
11428339Hsfx3lheat shock transcription factor family, X-linked member 3 likeX146126163146128629Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10124DXWox27134X112133718112133852Ratregion
10125DXMgh7230X112124540112124758Ratregion
10558DXWox30151X138400716138400867Ratregion
11029DXWox29294X127143992127144286Ratregion
33893D7Mit15150X124600195124600383Ratregion
36049DXRat19162X107292714107292880Ratregion
36215DXRat23126X136707001136707121Ratregion
36247DXRat130158X133365720133365888Ratregion
37078DXRat22227X122067615122067837Ratregion
37648DXRat73139X110631371110631508Ratregion
34783DXRat21148X125812805125812949Ratregion
34825DXRat20175X113805422113805597Ratregion
34991DXRat66138X110639479110639627Ratregion
39636DXRat115213X103865285103865500Ratregion
39724DXRat103133X126975089126975220Ratregion
39840DXRat117239X132425877132426116Ratregion
39862DXRat105196X138052086138052278Ratregion
41530DXRat104156X136437741136437891Ratregion
40690DXRat97148X107826652107826800Ratregion
39996DXRat101156X120948681120948841Ratregion
39120DXRat69248X112253959112254209Ratregion
39142DXRat55202X134429057134429259Ratregion
39210DXRat64241X112934952112935181Ratregion
39360DXRat63247X111179235111179484Ratregion
39434DXRat116212X127266809127267035Ratregion
39498DXRat118205X127438586127438793Ratregion
39514DXRat119249X134846591134846842Ratregion
41396DXRat100157X115075611115075776Ratregion
42440DXRat148204X106008181106008389Ratregion
42441DXRat150157X127845073127845244Ratregion
41624DXRat99145X117002093117002232Ratregion
41658DXRat129241X110631363110631602Ratregion
41778D17Rat146200X126998364126998571Ratregion
41896DXRat149239X128012298128012548Ratregion
43151DXRat132201X116926119116926150Ratregion
43163DXRat139245X111183810111184051Ratregion
43165DXRat142203X140755562140755763Ratregion
43166DXRat141207X135183402135183610Ratregion
44552D9Wox21136X136827745136827802Ratregion
43406DXGot57260X120556020120556280Ratregion
44360DXGot47187X109544084109544275Ratregion
43947DXWox3130X120568566120568734Ratregion
43950DXGot56163X121375172121375335Ratregion
43955DXGot54126X126441996126442122Ratregion
43956DXGot61141X113517713113517854Ratregion
60685DXGot46222X111179183111179407Ratregion
60686DXGot48250X116647192116647444Ratregion
60687DXGot4998X116904115116904211Ratregion
60688DXGot50148X115310181115310329Ratregion
60689DXGot51204X116074418116074624Ratregion
60690DXGot52167X117722055117722222Ratregion
60690DXGot52167X117722055117722222Ratregion
60691DXGot53257X116199160116199418Ratregion
60692DXGot58133X126421699126421832Ratregion
60695DXGot63147X116269250116269397Ratregion
60696DXGot64219X113419015113419234Ratregion
66696D1Uia17200X142552946142553146Ratregion
66722DXMco2277X121505375121505657Ratregion
1630344DXGot161209X106300074106300283Ratregion
1630816DXGot102237X103992664103992903Ratregion
1630841DXGot175229X144358419144358648Ratregion
1631344DXGot121125X108783743108783865Ratregion
1631455DXGot168293X128434944128435237Ratregion
1631802DXGot116298X113256622113256920Ratregion
1631967DXGot106172X136162021136162193Ratregion
1632053DXWox16305X132732989132733294Ratregion
1628053DXGot132234X138794053138794287Ratregion
1629391DXGot158239X136359121136359357Ratregion
1629595DXGot157275X137554255137554534Ratregion
1638718DXGot179196X147117629147117826Ratregion
1638722DXGot190158X141937659141937817Ratregion
1638817DXGot181125X147786007147786132Ratregion
1639228DXGot189114X145525014145525128Ratregion
1641070DXGot203217X107874509107874726Ratregion
1641420DXWox36X132237528132237746Ratregion
1635289DXGot171235X133841276133841518Ratregion
1635417DXGot119229X135340915135341144Ratregion
1635417DXGot119229X135340915135341291Ratregion
1635824DXGot167258X146194366146194619Ratregion
1635855DXGot112181X141714594141714775Ratregion
1636054DXGot103212X131228069131228281Ratregion
1636110DXGot166298X122933940122934238Ratregion
1637806DXGot147154X132678804132678960Ratregion
1633700DXGot160208X108339157108339360Ratregion
1633700DXGot160208X108339157108339360Ratregion
1633823DXGot140118X144131476144131594Ratregion
1633894DXWox35244X116539292116539536Ratregion
1634443DXGot126157X129502342129502496Ratregion
7205926PMC28413P1115X116761789116761904Ratregion
7193104AA924752189X111923266111923454Ratregion
7193104AA924752189X111933167111933355Ratregion
7193104AA924752189X111939024111939212Ratregion
5035851PMC23951P1565X109620324109620789Ratregion
5036011PMC85361P1357X109620276109620627Ratregion
5038738AW549906141X132699109132699250Ratregion
5038816RH127349195X138396489138396684Ratregion
5036057Cldn2693X103467561103468254Ratregion
5036157D11Bhm8895X111074368111074463Ratregion
5038946RH127423194X133430726133430920Ratregion
7206632Slc25a15950X147185942147186892Ratregion
7206640Sox3691X139308678139309369Ratregion
5039304RH127629218X106900903106901121Ratregion
5036783AU049191203X134976156134976359Ratregion
5036973AU049795223X105054231105054439Ratregion
5036973AU049795223X105054231105054446Ratregion
5036989AU049841263X130135232130135493Ratregion
5037109SHGC-53120185X135460254135460440Ratregion
5035581DBX87X116167281116167369Ratregion
5035610DXS8324122X117362343117362465Ratregion
5031214DXS790682X120977573120977655Ratregion
5033845RH140330146X115436518115436664Ratregion
5025992RH130489182X104656950104657132Ratregion
5028615AI451128287X113942335113942622Ratregion
7205800D1S2012E0X115210686115211098Ratregion
7206224Hs6st2221X130968960130969181Ratregion
5026134RH131042203X127464353127464556Ratregion
5028757RH142214155X116541446116541601Ratregion
5028879RH142673127X128271099128271226Ratregion
5034213RH141795195X117289193117289388Ratregion
5034323AI029857182X116482893116484406Ratregion
5026430RH132181192X107946335107946527Ratregion
5031820AU047046120X105105656105105776Ratregion
5029221RH143976202X107373970107374172Ratregion
5034788AI010734153X127140118127140272Ratregion
5029549BG375700177X133097828133098005Ratregion
5029799AI071251220X131644949131645169Ratregion
5034916AI008298220X116393490116393710Ratregion
5034944AA851932113X139710205139710318Ratregion
5034998UniSTS:257002178X133232960133233138Ratregion
5027443AW319508121X108898630108898751Ratregion
5027551AW10764087X112123581112123668Ratregion
5027553D8327798X127706245127706343Ratregion
5032993RH137224190X134297373134297563Ratregion
5025010AU022494218X139680514139680732Ratregion
5027683Suv39h1891X141794206141795097Ratregion
5030287BE099951163X106720395106720558Ratregion
5025168BB377684148X131642745131642893Ratregion
502790327.MMHAP18FLA6.seq226X145623162145623388Ratregion
5025428RH128278186X106466185106466371Ratregion
502796344.MMHAP34FRG11.seq195X136560095136560290Ratregion
5028031MHAa53g6.seq103X138442448138442551Ratregion
5033499RH139054162X111628349111628511Ratregion
5025632RH129063217X104657347104657564Ratregion
5028305DXMit238114X115320656115320770Ratregion
5031193RH102301153X115314413115314566Ratregion
5031209GDB:192503221X138395201138395422Ratregion
5056329RH144315110X135186611135186721Ratregion
5056459RH144390265X106438054106438319Ratregion
5051611AW260253127X116970302116970429Ratregion
5054355RH143176113X120436857120436970Ratregion
5057514AA819641201X117178827117179028Ratregion
5055771RH143993205X117358385117358590Ratregion
5054845RH143458117X145949718145949835Ratregion
5054983RH143538187X139590359139590546Ratregion
5059624BF394020223X127135238127135461Ratregion
5056655RH144503245X116226921116227165Ratregion
5052257L23971180X147276203147276383Ratregion
5052567AU023707168X115603531115603699Ratregion
5059736AI556806189X134614703134614892Ratregion
5055529RH143854143X131644860131645003Ratregion
5059988BE103656190X120674843120675033Ratregion
5052335U39738194X107367951107368145Ratregion
5052359X83577157X131644812131644969Ratregion
5058428BE096007141X105942849105942990Ratregion
5050796RH134263210X116335393116335603Ratregion
5053769RH142840184X121514665121514849Ratregion
5050046RH133831211X127685256127685467Ratregion
5050974RH134366211X132767834132768045Ratregion
5054187RH143080275X112374709112374984Ratregion
5050166RH133900217X130509768130509985Ratregion
5050320RH133988217X127439770127439987Ratregion
5054303RH143147137X115176803115176940Ratregion
5050566RH134130220X139308759139308977Ratregion
5050784RH134256205X105702568105702773Ratregion
5051499U30840105X146383339146383444Ratregion
5051727RH94622113X110867633110867746Ratregion
5054651RH143347107X115204825115205309Ratregion
5050902RH134324183X107589713107589896Ratregion
5051008RH134384215X134309179134309394Ratregion
5043946RH130322189X139680528139680717Ratregion
5043946RH130322189X139680528139680717Ratregion
5044178RH130454191X136129289136129480Ratregion
5045026RH130940197X116087909116088106Ratregion
5044188RH130460194X105322455105322649Ratregion
5045650RH131299194X134345240134345434Ratregion
5044802RH130812196X103480711103480907Ratregion
5046464RH131768182X116970298116970480Ratregion
5048972RH133212208X111620504111620713Ratregion
5046734RH131924188X140681929140682117Ratregion
5047992RH132646206X104766601104766809Ratregion
5047300RH132248200X116126415116126615Ratregion
5042724RH129607199X106296855106297054Ratregion
5042888RH129704182X117057329117057511Ratregion
5042022RH129193181X133369533133369714Ratregion
5042022RH129193181X133414023133414204Ratregion
5042022RH129193181X133446661133446842Ratregion
5040372RH128245203X107380969107381172Ratregion
5043252RH129919202X130642076130642278Ratregion
5043294RH129944157X121394412121394569Ratregion
5040060RH128066185X126894182126894368Ratregion
5041038RH128627208X119708403119708611Ratregion
5041038RH128627208X119708403119708611Ratregion
5041112RH128669163X113219370113219533Ratregion
5041260RH128755160X134949369134949529Ratregion
5043692RH130172182X147186112147186283Ratregion
5040440RH128284187X138922906138923093Ratregion
5072712RH137009199X109595553109595749Ratregion
5075148RH138426190X131869048131869238Ratregion
5073818RH137656137X148242995148243132Ratregion
5076400RH139153186X131018631131018817Ratregion
5072798RH137059181X108982573108982754Ratregion
5076992RH139497180X115436360115436540Ratregion
5075870RH138845179X140255659140255838Ratregion
5074828RH138242123X122297661122297784Ratregion
5077688RH139900186X127204002127204188Ratregion
5077746RH139933202X112123527112123728Ratregion
5076664RH139307199X132685648132685847Ratregion
5075784RH138795162X104153874104154036Ratregion
5076284RH139086208X134949037134949245Ratregion
5079574RH141078189X103727244103727433Ratregion
5079680RH141141182X132807646132807828Ratregion
5077162RH139598189X134408587134408776Ratregion
5077472RH139776200X130648778130648978Ratregion
5079854RH141241180X145412723145412766Ratregion
5077756RH139940196X115603643115603839Ratregion
5080092RH141378208X108898632108898836Ratregion
5080112RH141390196X132807218132807415Ratregion
5070706RH134657200X103436904103437104Ratregion
5073412RH137421197X127895929127896126Ratregion
5078774RH140544249X133119618133119867Ratregion
5071270RH134985184X115314589115314773Ratregion
5073546RH137499202X117376837117377039Ratregion
5074218RH137889136X107372564107372700Ratregion
5071256RH134977213X133550344133550557Ratregion
5063324BE107538173X138929148138929321Ratregion
5066640AU048238114X130301124130301238Ratregion
5066898AU048085179X131657635131657814Ratregion
5067674AU047603160X146683828146683988Ratregion
5067692AU047593283X124194668124194946Ratregion
5067758AU047554226X133221428133221649Ratregion
5067932AU047450213X109480507109480722Ratregion
5067994AU047413142X121719358121719504Ratregion
5068024AU047395212X126609746126609953Ratregion
5067576AU047662280X147771159147771432Ratregion
5068112AU047340148X122095371122095519Ratregion
5068864AU046878297X135095548135095845Ratregion
5069400AU046524162X112423508112423667Ratregion
5069528AU046438261X117344411117344672Ratregion
5070159RH9450695X141340349141340444Ratregion
5070159RH9450695X141340349141340444Ratregion
5069566AU046411206X109794791109795534Ratregion
5069694AU046333175X121172635121172810Ratregion
5069092AU046730264X136359127136359388Ratregion
5069110AU046719259X136359127136359386Ratregion
5069268AU046608248X105922529105922605Ratregion
5060086BF388460165X130058018130058183Ratregion
5060140AI072432187X116156950116157137Ratregion
5062054BI288264206X140615060140615266Ratregion
5065148BE121006160X127902305127902465Ratregion
5062392BF397876161X115600212115600373Ratregion
5064316BE114401196X133675360133675556Ratregion
5064316BE114401196X133765578133765774Ratregion
5064316BE114401196X133815186133815382Ratregion
5064420BI302169182X105430215105430397Ratregion
5060100BF388493202X115844128115844330Ratregion
5061890BI294036164X115598521115598685Ratregion
5062064BF397358216X103608981103609197Ratregion
5062090BF397401234X127584237127584473Ratregion
5065140AI044873220X116395190116395411Ratregion
5065226AA996826154X135145532135145686Ratregion
5065278BE121346101X116153470116153571Ratregion
5062394BE106633150X121436008121436158Ratregion
5065500BE109132151X107370873107371024Ratregion
5064426BI302182183X106107089106107272Ratregion
5066128BE116925189X108809377108809566Ratregion
5063062BE113681170X106426400106426570Ratregion
5063114BE107180214X117181960117182174Ratregion
5064658BF399517122X104263508104263630Ratregion
5066374AU048395273X118590796118591071Ratregion
5066506AU048316228X136959180136959408Ratregion
5084348AI408836243X116327367116327610Ratregion
5086897AA852020180X135145556135145736Ratregion
5086367BF401448149X107966051107966200Ratregion
5082391AA901280179X127650284127650463Ratregion
5089861AU049407235X134223176134223411Ratregion
5089933AU049450193X103719292103719485Ratregion
5089463AU049171130X105532692105532822Ratregion
5090733AU049931176X141953020141953196Ratregion
5083725AI237704109X135305310135305419Ratregion
5083829AI599687149X107942438107942587Ratregion
5089649AU049281188X127399445127399633Ratregion
5089691AU049305157X119726206119726363Ratregion
5089735AU049332266X122269668122269934Ratregion
5084872AI171612172X116124645116124817Ratregion
5084984AI179798152X103668657103668809Ratregion
5082149BI280022171X117620601117620772Ratregion
5085543BE097744156X133346406133346562Ratregion
5085543BE097744156X133470595133470751Ratregion
5088509AU048612265X118411244118411509Ratregion
5088589AU048659156X126536618126536774Ratregion
5090343AU049694155X148249636148249791Ratregion
5090495AU049784162X107038515107038679Ratregion
5081198RH142021186X107883705107885105Ratregion
5080958RH141881190X116393852116394042Ratregion
5084640AI227702217X129070018129070235Ratregion
5082745BF390012225X132701028132701253Ratregion
5084750AI179244115X142624485142624600Ratregion
5084764AI00834292X116154493116154585Ratregion
5081615BE117640170X116339316116339486Ratregion
5083603BG381125131X132805446132805577Ratregion
5502835KLHL13187X113974248113974984Ratregion
5502837ZIC3145X136128488136128633Ratregion
55030741100001E04Rik124X128784216128784483Ratregion
5503322UniSTS:238018319X120636361120636680Ratregion
5503336UniSTS:238089279X103481126103481405Ratregion
5503210ha20280X125999885126000624Ratregion
5504004px-17e5124X135154816135154940Ratregion
5504054px-48d2169X115240001115240170Ratregion
5507741REN51965251X120977508120977759Ratregion
5507743REN51966258X120977746120978004Ratregion
5507745REN51964267X120977260120977527Ratregion
5507747REN52332218X121057921121058139Ratregion
5507749REN52504274X121095306121095580Ratregion
5507751REN52551258X121104358121104616Ratregion
5507753REN52552253X121104600121104853Ratregion
5507755REN52553262X121104812121105074Ratregion
5503569SLITRK4__5446563X142711642142712205Ratregion
5503790UniSTS:471081615X131644798131645413Ratregion
5503996px-14c7137X116106432116106569Ratregion
5504006px-1f12104X113174890113174994Ratregion
5504040px-42a6140X132996306132996446Ratregion
5504052px-50b1114X135765133135765247Ratregion
5504058px-51b11104X138630083138630187Ratregion
5504060px-58a599X126688746126688845Ratregion
5504064px-59b1213X129018187129018400Ratregion
5504740PMC86565P3295X105359006105359301Ratregion
5504238AL032586175X132233292132233467Ratregion
5505263Irs4395X105344181105344576Ratregion
5505428Ptp4a1975X137875660137876614Ratregion
5504646PMC321611P2109X132766625132766904Ratregion
5505068Agtr281X112122316112122397Ratregion
5505658UniSTS:4885321443X116292100116293543Ratregion
5505923UniSTS:496533962X112121421112122383Ratregion
5506037ATG4A150X104764338104764488Ratregion
5506296D17S895E98X109378033109378130Ratregion
5506557ODZ1_364664X121404912121405576Ratregion
5506903G47725275X137666844137667119Ratregion
5507323GDB:192504107X132766619132766896Ratregion
5501982MARC_21759-21760:1023907404:5752X116091612116092364Ratregion
5500292D20S1001100X116392481116392581Ratregion
5500332GDB:193196783X115306844115307626Ratregion
5500815stSG6336851139X121103852121104991Ratregion
5500364GDB:34215996X147240416147240512Ratregion
5500374GDB:370773206X147258915147259237Ratregion
5500495RH126553249X116088325116088574Ratregion
5503320UniSTS:238015122X116970304116970426Ratregion
5500845L7788075X132027685132027760Ratregion
5501195PMC153509P1282X112121846112122128Ratregion
5501309ECD13650587X120975484120976071Ratregion
5501233PMC162213P1777X129070251129071028Ratregion
5501540G16011149X117316169117316318Ratregion
5501247PMC166414P3170X120920962120921132Ratregion
5505114Fgf13912X137276913137277825Ratregion
5505206F9341X138394548138395225Ratregion
5502118MARC_5059-5060:996690096:1309X107589759107590068Ratregion
Position Markers

Flank 1: (DXRat98)
Rat AssemblyChrPosition (strand)Source
Rnor_5.0X122,686,596 - 122,686,899NCBI
RGSC_v3.4X9,007,287 - 9,007,589RGD
RGSC_v3.1X9,012,843 - 9,013,145RGD
SHRSP x BN MapX34.2399RGD
SHRSP x BN MapX34.2399UniSTS
FHH x ACI MapX36.86RGD
Peak: (DXRat21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X125,812,805 - 125,812,949 (+)MAPPER
Rnor_6.0X133,457,395 - 133,457,540NCBI
Rnor_5.0X133,535,321 - 133,535,466UniSTS
RGSC_v3.4X132,940,995 - 132,941,140UniSTS
RGSC_v3.4X132,940,994 - 132,941,140RGD
RGSC_v3.1X133,014,428 - 133,014,573RGD
CeleraX124,790,374 - 124,790,520UniSTS
RH 3.4 MapX861.2RGD
RH 3.4 MapX861.2UniSTS
SHRSP x BN MapX37.58UniSTS
SHRSP x BN MapX37.58RGD
FHH x ACI MapX40.46RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX112934952138400867Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
5685004Bss104Bone structure and strength QTL 1043.9tibia area (VT:1000281)tibia area measurement (CMO:0001382)X113805422126975220Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general parental S allele was responsible for decreased cognitive performance 1581615
qtl_statistics_details social-investigatory behavior involved direct contact while sniffing, nosing, close following, pawing, grooming or inspecting the body surface 1581615