Kidm31 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Kidm31 (Kidney mass QTL 31) Rattus norvegicus

Symbol: Kidm31
Name: Kidney mass QTL 31
RGD ID: 1582254
Previously known as: Kidney weight; Kidney wt
Trait: kidney mass   (VT:0002707)    
Measurement Type: both kidneys wet weight   (CMO:0000085)    
LOD Score: 3.0
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2854,237,644 - 85,365,202RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0858,425,510 - 91,990,535RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0857,006,784 - 91,507,228RGDRnor5.0
RGSC_v3.4857,308,572 - 89,558,994RGDRGSC3.4
RGSC_v3.1857,327,627 - 89,578,449RGD
Cross Type: intercross
Strains Crossed: PD/Cub BN/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
kidney mass  (IDA)

Rat Strain
BN/Cub  (IEA)
PD/Cub  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Dynamic genetic architecture of metabolic syndrome attributes in the rat. Seda O, etal., Physiol Genomics. 2005 Apr 14;21(2):243-52. Epub 2005 Feb 22.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1305224Slnsarcolipin85422138954248110Rat
41290367LOC120094162uncharacterized LOC12009416285426655954267447Rat
41037667LOC120094163uncharacterized LOC12009416385426746054273668Rat
1564186Elmod1ELMO domain containing 185429836354355348Rat
1311533Tnfaip8l3TNF alpha induced protein 8 like 385441350354455512Rat
41013761LOC120094479small nucleolar RNA SNORA4885442900954429149Rat
9399090LOC103693097uncharacterized LOC10369309785455011854564648Rat
2457Cyp19a1cytochrome P450, family 19, subfamily a, polypeptide 185455297854580375Rat
727879Gldngliomedin85467901554723198Rat
41140541LOC120094446small nucleolar RNA SNORD113/SNORD114 family85468644754686527Rat
1586163Dmxl2Dmx-like 285474116454884948Rat
7556443Ptbp1-ps2polypyrimidine tract binding protein 1, pseudogene 285476481654771085Rat
1309791Sh2d7SH2 domain containing 785491839954930129Rat
1308718Cib2calcium and integrin binding family member 285493026554947157Rat
70889Idh3aisocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha85497169454991085Rat
708557Acsbg1acyl-CoA synthetase bubblegum family member 185499129455047276Rat
1310035Dnaja4DnaJ heat shock protein family (Hsp40) member A485508524655102715Rat
1308228Skic8SKI8 subunit of superkiller complex85510354255120837Rat
2400Crabp1cellular retinoic acid binding protein 185513836355159360Rat
41285356Ndufb4-ps5NADH:ubiquinone oxidoreductase subunit B4, pseudogene 585521356055213943Rat
621539Ireb2iron responsive element binding protein 285522808055311613Rat
1308677Hykkhydroxylysine kinase85531591955339720Rat
61846Psma4proteasome 20S subunit alpha 485534043155347893Rat
2347Chrna5cholinergic receptor nicotinic alpha 5 subunit85536979455398526Rat
1596097Zc3h15-ps2zinc finger CCCH-type containing 15, pseudogene 285538506155386940Rat
2345Chrna3cholinergic receptor nicotinic alpha 3 subunit85540166855415165Rat
41116915LOC120094166uncharacterized LOC12009416685541281355497821Rat
2351Chrnb4cholinergic receptor nicotinic beta 4 subunit85541758355437027Rat
1307680Ube2q2ubiquitin conjugating enzyme E2 Q285551840255578342Rat
1306664Fbxo22F-box protein 2285557990655595981Rat
1589860Nrg4neuregulin 485558625355677829Rat
2322868Serbp1-ps1Serpine1 mRNA binding protein 1, pseudogene 185567664455685774Rat
1562084Tmem266transmembrane protein 26685570712255820692Rat
628747Etfaelectron transfer flavoprotein subunit alpha85583511555891890Rat
1563585Bola2-ps1bolA family member 2, pseudogene 185590434055904691Rat
621849Isl2ISL LIM homeobox 285592380555928790Rat
621585ScaperS-phase cyclin A-associated protein in the ER85593271756332222Rat
15635784930563M21RiklRIKEN cDNA 4930563M21 gene like85634793656413500Rat
1588677Dppa3l1developmental pluripotency associated 3-like 185642160956422277Rat
3548Rcn2reticulocalbin 285644920656466253Rat
11390746LOC108351848uncharacterized LOC10835184885647585856481272Rat
1307557Pstpip1proline-serine-threonine phosphatase-interacting protein 185649928756538593Rat
1359444Tspan3tetraspanin 385654606756569815Rat
41139383Rpl17-ps2ribosomal protein L17, pseudogene 285657714156580015Rat
1312026Peak1pseudopodium-enriched atypical kinase 185660504056819748Rat
41106535Isca2-ps2iron-sulfur cluster assembly 2, pseudogene 285668455056698422Rat
1564760Hmg20ahigh mobility group 20A85681967356895658Rat
1308668Lingo1leucine rich repeat and Ig domain containing 185701127257193496Rat
41191557LOC120094170uncharacterized LOC12009417085706336857068210Rat
2322284Atp5mgl1ATP synthase membrane subunit G like 185714914157164984Rat
40988640LOC120094169ATP synthase subunit g, mitochondrial-like85716138157161733Rat
1304976Cimap1cciliary microtubule associated protein 1C85724874657281084Rat
619942Cspg4chondroitin sulfate proteoglycan 485726496257300010Rat
40968802Trnap-agg41transfer RNA proline (anticodon AGG) 4185727036857270448Rat
1307898Snx33sorting nexin 3385731586157328522Rat
9187952Rps15al7ribosomal protein S15a like 785733639757336928Rat
1306825Imp3IMP U3 small nucleolar ribonucleoprotein 385733952857340416Rat
1303191Snupnsnurportin 185734741257388345Rat
9177537LOC103693102uncharacterized LOC10369310285738839757392878Rat
628726Ptpn9protein tyrosine phosphatase, non-receptor type 985739129057472352Rat
7498715LOC102553607uncharacterized LOC10255360785746579257467264Rat
1311598Sin3aSIN3 transcription regulator family member A85748153957536195Rat
41363268LOC120094171uncharacterized LOC12009417185748387457486288Rat
41003300LOC120094172uncharacterized LOC12009417285750484757538496Rat
628787Man2c1mannosidase, alpha, class 2C, member 185753787957549691Rat
1306077Neil1nei-like DNA glycosylase 185755014257556884Rat
1306104Commd4COMM domain containing 485756623657569701Rat
2322085Vdac2-ps2voltage-dependent anion channel 2, pseudogene 285758306857583966Rat
9197090LOC103693103uncharacterized LOC10369310385759636457608016Rat
1305464C8h15orf39similar to human chromosome 15 open reading frame 3985764632457655896Rat
1306267Ppcdcphosphopantothenoylcysteine decarboxylase85781519557842863Rat
68356Scamp5secretory carrier membrane protein 585784583157884516Rat
1305290Rpp25ribonuclease P and MRP subunit p2585790735257908732Rat
41071958Snora3csmall nucleolar RNA, H/ACA box 3C85791725157917381Rat
620607Cox5acytochrome c oxidase subunit 5A85792237457933781Rat
1310727Fam219bfamily with sequence similarity 219, member B85794132757946916Rat
3107Mpimannose phosphate isomerase85794788357956205Rat
41126862Trnaa-agc55transfer RNA alanine (anticodon AGC) 5585795051757950589Rat
68348Scamp2secretory carrier membrane protein 285796561257992248Rat
1587417Ulk3unc-51 like kinase 385799239658000220Rat
1560104Cplx3complexin 385800353558010297Rat
1310538Lman1llectin, mannose-binding, 1 like85801083958029599Rat
1308800CskC-terminal Src kinase85802974858048742Rat
2459Cyp1a2cytochrome P450, family 1, subfamily a, polypeptide 285807536758082255Rat
2458Cyp1a1cytochrome P450, family 1, subfamily a, polypeptide 185809602158102130Rat
1306898Edc3enhancer of mRNA decapping 385810614758151685Rat
41249759LOC120094560U6 spliceosomal RNA85810897858109084Rat
621259Clk3CDC-like kinase 385815215558167196Rat
7627001Ssbp1-ps4single stranded DNA binding protein 1, pseudogene 485818348858187717Rat
1306335Arid3bAT-rich interaction domain 3B85819326858240901Rat
1303055Ubl7ubiquitin-like 785832127958340353Rat
1305192Sema7asemaphorin 7A (John Milton Hagen blood group)85834844858370536Rat
9121844LOC103693105uncharacterized LOC10369310585840456558407384Rat
69325Cyp11a1cytochrome P450, family 11, subfamily a, polypeptide 185842280758434342Rat
1561126Ccdc33coiled-coil domain containing 3385843479858534338Rat
41130582LOC120094173uncharacterized LOC12009417385854867858556154Rat
1307551Stra6signaling receptor and transporter of retinol STRA685854889958568861Rat
1596359Islrimmunoglobulin superfamily containing leucine-rich repeat85857115558574128Rat
6497037Islr2immunoglobulin superfamily containing leucine-rich repeat 285860816558616246Rat
1562602PmlPML nuclear body scaffold85862734758661927Rat
1559463Stoml1stomatin like 185866198058669860Rat
1308752Loxl1lysyl oxidase-like 185869176358716365Rat
1590999Rpl38-ps1ribosomal protein L38, pseudogene 185874215558742473Rat
41400456LOC120094174uncharacterized LOC12009417485874472958753019Rat
1310243Tbc1d21TBC1 domain family, member 2185876156258773711Rat
41019779LOC120094175uncharacterized LOC12009417585881864558823112Rat
6494141LOC100911193uncharacterized LOC10091119385886069358876437Rat
1562618Insyn1inhibitory synaptic factor 185890415358914850Rat
727815Cd276Cd276 molecule85893775158968082Rat
620296Nptnneuroplastin85899687359063402Rat
1311874Rec114REC114 meiotic recombination protein85906335259221439Rat
71065Hcn4hyperpolarization activated cyclic nucleotide-gated potassium channel 485922220659259626Rat
619837Neo1neogenin 185927386059426486Rat
1586219Rps2-ps27ribosomal protein S2, pseudogene 2785965686559657609Rat
1306103AdpgkADP-dependent glucokinase85969940059727352Rat
1309134Bbs4Bardet-Biedl syndrome 485973191259765408Rat
1589878Rpl13-ps16ribosomal protein L13, pseudogene 1685976361459764315Rat
1308131Arih1ariadne RBR E3 ubiquitin protein ligase 185977737859879762Rat
1585107Tmem202transmembrane protein 20285991082459919342Rat
41331956LOC120094522small nucleolar RNA SNORA4085992295059923077Rat
2792Hexahexosaminidase subunit alpha85993652659961654Rat
1310451Celf6CUGBP, Elav-like family member 685997509560006060Rat
1310937Parp6poly (ADP-ribose) polymerase family, member 686001659460049108Rat
40961798LOC120094538U4 spliceosomal RNA86005421360054387Rat
3337Pkmpyruvate kinase M1/286005762960079600Rat
1564007Gramd2aGRAM domain containing 2A86007974460117788Rat
1309955Senp8SUMO peptidase family member, NEDD8 specific86013544660148836Rat
621395Myo9amyosin IXA86014923460352330Rat
11445923LOC10835171740S ribosomal protein S15a pseudogene86016472760165118Rat
41399473Tmsb10-ps1thymosin, beta 10, pseudogene 186018936160189597Rat
7732046LOC102546766uncharacterized LOC10254676686024857360362707Rat
2318602Nr2e3nuclear receptor subfamily 2, group E, member 386036558160373383Rat
1566296Thsd4thrombospondin type 1 domain containing 486038463660984419Rat
41006620LOC120094180uncharacterized LOC12009418086078450560797381Rat
41055777LOC120094490small nucleolar RNA SNORA1786088136260881487Rat
1309466Lrrc49leucine rich repeat containing 4986105326461160695Rat
11505794LOC108351719uncharacterized LOC10835171986116031761161426Rat
1308414Larp6La ribonucleoprotein 6, translational regulator86118374461205548Rat
11466450LOC10835172060S ribosomal protein L21 pseudogene86125187661252358Rat
1560011Uacauveal autoantigen with coiled-coil domains and ankyrin repeats86125941561347789Rat
1588688LOC691000hypothetical protein LOC69100086150666561511869Rat
7556147LOC102551127uncharacterized LOC10255112786152540061584245Rat
41167161LOC120094181uncharacterized LOC12009418186159163861602507Rat
9097864LOC103693111uncharacterized LOC10369311186163264661642054Rat
9453956LOC103693112uncharacterized LOC10369311286163532961641209Rat
9279927LOC103693113uncharacterized LOC10369311386182492861828616Rat
620292Tle3TLE family member 3, transcriptional corepressor86185779161903505Rat
7541432LOC102551666uncharacterized LOC10255166686190391161920863Rat
7661862LOC102552398uncharacterized LOC10255239886227115062281677Rat
621774Rplp1ribosomal protein lateral stalk subunit P186239400862395341Rat
1308596Kif23kinesin family member 2386239790862425162Rat
1311259Paqr5progestin and adipoQ receptor family member 586243186762513688Rat
1565253Glceglucuronic acid epimerase86254610462612144Rat
1563468Spesp1sperm equatorial segment protein 186275131362766657Rat
41029455Mrps16-ps1mitochondrial ribosomal protein S16, pseudogene 186277758662778095Rat
11508551Anp32aacidic nuclear phosphoprotein 32 family member A86282909962865443Rat
1561953Coro2bcoronin 2B86290686163017295Rat
41366886LOC120094182uncharacterized LOC12009418286290876762914282Rat
41303672LOC120094558U6 spliceosomal RNA86300763663007742Rat
11404765LOC108351728ubiquitin-conjugating enzyme E2 L3 pseudogene86308517763085933Rat
11358385LOC108351729uncharacterized LOC10835172986310537063108870Rat
7646170LOC102556363uncharacterized LOC10255636386312141763140722Rat
1311711Itga11integrin subunit alpha 1186314599863254714Rat
41067991LOC120094184uncharacterized LOC12009418486314612263147766Rat
41266508LOC120094185uncharacterized LOC12009418586317381663175326Rat
40936029LOC120094183uncharacterized LOC12009418386322696163229389Rat
1304569Fem1bfem-1 homolog B86326530163278577Rat
7663361LOC102546547uncharacterized LOC10254654786330181163304098Rat
1309714Cln6CLN6, transmembrane ER protein86330335663318360Rat
1583918Calml4calmodulin-like 486332342663335234Rat
1307843Pias1protein inhibitor of activated STAT, 186333815063451670Rat
40999696LOC120094554U6 spliceosomal RNA86347526363475369Rat
2320152Ppia-ps16peptidylprolyl isomerase A , pseudogene 1686357631463578473Rat
41336355LOC120094551U6 spliceosomal RNA86359404063594146Rat
1307687Skor1SKI family transcriptional corepressor 186359915363609727Rat
61890Map2k5mitogen activated protein kinase kinase 586362522063852090Rat
1309779C8h15orf61similar to human chromosome 15 open reading frame 6186386812563872863Rat
1310670IqchIQ motif containing H86388981664083248Rat
41223240LOC12009311960S ribosomal protein L37-like86390385363906035Rat
7569612LOC102547003uncharacterized LOC10254700386394107363967617Rat
621601Aagabalpha- and gamma-adaptin binding protein86408334364121903Rat
3032Smad3SMAD family member 386412682964236960Rat
1305069Smad6SMAD family member 686445011464519673Rat
1305177Lctllactase-like86461835664654851Rat
1583880Zwilchzwilch kinetochore protein86463840164670911Rat
41250441LOC120094536U12 minor spliceosomal RNA86464566764645817Rat
619824Rpl4ribosomal protein L486467117764676301Rat
40979856LOC120094440small nucleolar RNA SNORD1886467281864672885Rat
41253506Snord16small nucleolar RNA, C/D box 1686467319564673293Rat
41376305Snord18bsmall nucleolar RNA, C/D box 18B86467365664673726Rat
41165082LOC120094442small nucleolar RNA SNORD1686467437364674471Rat
40980514Snord18csmall nucleolar RNA, C/D box 18C86467483864674908Rat
1582813Snapc5small nuclear RNA activating complex, polypeptide 586467720464680769Rat
70495Map2k1mitogen activated protein kinase kinase 186468344964754900Rat
1564084Tipintimeless interacting protein86478081364801358Rat
41136166Trnas-aga48transfer RNA serine (anticodon AGA) 4886478259164782665Rat
41018855Scarna14small Cajal body-specific RNA 1486479352164793655Rat
1308959Dis3lDIS3-like exosome 3'-5' exoribonuclease86480392564840306Rat
1582797Megf11multiple EGF-like-domains 1186489231265218984Rat
619762Rab11aRAB11a, member RAS oncogene family86522369865246461Rat
11480280Trnaq-cug5transfer RNA glutamine (anticodon CUG) 586524680265246873Rat
1592008Rpl7-ps26ribosomal protein L7, pseudogene 2686526084165261761Rat
41279018LOC120094392thymosin beta-4-like86526637665266564Rat
7531986LOC102548661uncharacterized LOC10254866186531184965322682Rat
1562639Dennd4aDENN domain containing 4A86532292065436331Rat
41086543LOC120094514small nucleolar RNA SNORA1786539231565392442Rat
620080Slc24a1solute carrier family 24 member 186544084265466001Rat
1359616Ints14integrator complex subunit 1486547578865500807Rat
1565496Hacd33-hydroxyacyl-CoA dehydratase 386550124065538507Rat
40981180LOC120094339ATP synthase membrane subunit DAPIT, mitochondrial-like86554513065546714Rat
1310901Dpp8dipeptidylpeptidase 886555062065605828Rat
1310919Igdcc4immunoglobulin superfamily, DCC subclass, member 486562189365657651Rat
1307338Igdcc3immunoglobulin superfamily, DCC subclass, member 386566116565707961Rat
1564649Rps9-ps14ribosomal protein S9, pseudogene 1486571435565714932Rat
41235349LOC120094550U5 spliceosomal RNA86571751265717627Rat
41227585LOC120094549U5 spliceosomal RNA86572087665720991Rat
1306243Parp16poly (ADP-ribose) polymerase family, member 1686573115265749438Rat
1305124Cilpcartilage intermediate layer protein86577728165792251Rat
1304883Clpxcaseinolytic mitochondrial matrix peptidase chaperone subunit X86580546065845643Rat
1308961Pdcd7programmed cell death 786586260665877333Rat
1582742Ubap1lubiquitin associated protein 1-like86587748865897593Rat
1311093Kbtbd13kelch repeat and BTB domain containing 1386590982165911558Rat
1306268Rasl12RAS-like, family 1286591784065931885Rat
1565748Slc51bSLC51 subunit beta86593189165939953Rat
1309462Mtfmtmitochondrial methionyl-tRNA formyltransferase86595378765971841Rat
1359141Spg21SPG21 abhydrolase domain containing, maspardin86598099266008537Rat
1586052Ankdd1aankyrin repeat and death domain containing 1A86601757166043738Rat
1305718Plekho2pleckstrin homology domain containing O286607910666105283Rat
1586053Pif1PIF1 5'-to-3' DNA helicase86611064166120202Rat
1561222Rbpms2RNA binding protein, mRNA processing factor 286615316966184278Rat
9119107LOC103693122uncharacterized LOC10369312286619601266199609Rat
1562933Oaz2ornithine decarboxylase antizyme 286619969466213513Rat
1561651Zfp609zinc finger protein 60986621455366349319Rat
1306838Trip4thyroid hormone receptor interactor 486635186166439679Rat
41323214LOC120094556U6 spliceosomal RNA86642019666420302Rat
1303041PclafPCNA clamp associated factor86642060666432994Rat
621404Csnk1g1casein kinase 1, gamma 186643976066577247Rat
41131898LOC120094491small nucleolar RNA SNORA1786647803366478162Rat
620312Ppibpeptidylprolyl isomerase B86660387766609734Rat
1305042Snx22sorting nexin 2286660991466612932Rat
68935Snx1sorting nexin 186663008666670418Rat
1307481Ciao2acytosolic iron-sulfur assembly component 2A86667053366682455Rat
1304708Dapk2death-associated protein kinase 286670653666825567Rat
11467231LOC108351731uncharacterized LOC10835173186684740166856900Rat
1306366Herc1HECT and RLD domain containing E3 ubiquitin protein ligase family member 186685716967070318Rat
1311830Fbxl22F-box and leucine-rich repeat protein 2286706999867076685Rat
1308852Usp3ubiquitin specific peptidase 386707824967154109Rat
41014780LOC120094375uncharacterized LOC12009437586716657067171810Rat
1306612Car12carbonic anhydrase 1286727473967330428Rat
41032090LOC120094191uncharacterized LOC12009419186728412667290045Rat
1597236Aph1bl2aph-1 homolog B, gamma secretase subunit like 286734179067363967Rat
41103414Aph1bl1aph-1 homolog B, gamma secretase subunit like 186739229467414810Rat
1562468Aph1baph-1 homolog B, gamma secretase subunit86742919867454735Rat
628764Rab8bRAB8B, member RAS oncogene family86745892167536466Rat
41247804LOC120094455small nucleolar RNA SNORA886752339667523532Rat
2319494Cox6a1-ps1cytochrome c oxidase subunit 6A1, pseudogene 186754719867548236Rat
7713084LOC102554897uncharacterized LOC10255489786755475267558925Rat
1595396Rps27lribosomal protein S27-like86756248367567418Rat
1304788Lactblactamase, beta86757150467587592Rat
41005006LOC120094417U6 spliceosomal RNA86759571867595826Rat
3898Tpm1tropomyosin 186763547967662330Rat
1565416Tln2talin 286783092068252240Rat
2325453Mir190microRNA 19086785098767851071Rat
40957589LOC120094557U6 spliceosomal RNA86817542268175528Rat
1597204Taf12-ps1TATA-box binding protein associated factor 12, pseudogene 186828240368283243Rat
6493603LOC100911360uncharacterized LOC10091136086833490468336957Rat
1591932C2cd4bC2 calcium-dependent domain containing 4B86837279368396477Rat
1596010C2cd4aC2 calcium-dependent domain containing 4A86846701768469781Rat
1560364Vps13cvacuolar protein sorting 13 homolog C86847836668651893Rat
1596001Akap8-ps1A-kinase anchoring protein 8, pseuhogene 186872710768735855Rat
9163290LOC103693125uncharacterized LOC10369312586877636868798331Rat
1308419RoraRAR-related orphan receptor A86930163570034741Rat
41403177LOC120094342uncharacterized LOC12009434286949914069518217Rat
1585038Ice2interactor of little elongation complex ELL subunit 287004341970085217Rat
621170Anxa2annexin A287010526870141663Rat
9213299LOC103693133uncharacterized LOC10369313387018426070218566Rat
41252189LOC120094527U2 spliceosomal RNA87024543270245526Rat
1305217Foxb1forkhead box B187040722170409841Rat
41163972LOC120094195uncharacterized LOC12009419587045233670467507Rat
11487202LOC108351739uncharacterized LOC10835173987051246670514362Rat
41393631LOC120094198uncharacterized LOC12009419887057558070605286Rat
1308944Bnip2BCL2 interacting protein 287064043670661782Rat
620720Gtf2a2general transcription factor 2A subunit 287066244770675576Rat
631333Gcnt3glucosaminyl (N-acetyl) transferase 3, mucin type87068917370696476Rat
7711923Selenok-ps1selenoprotein K, pseudogene 187071951070720199Rat
1311958Fam81afamily with sequence similarity 81, member A87076285270821898Rat
41333547LOC120094501small nucleolar RNA SNORA1787082988670830017Rat
3144Myo1emyosin IE87088793471080180Rat
41237953Rpl37a-ps11ribosomal protein L37A, pseudogene 1187090209870945921Rat
41286225LOC120094553U6 spliceosomal RNA87107784671077952Rat
1308176Ccnb2cyclin B287108759471100794Rat
1310097Rnf111ring finger protein 11187110396771180172Rat
7704513Polr2k-ps1RNA polymerase II, I and III subunit K, pseudogene 187111895771119989Rat
41241038LOC120094412U6 spliceosomal RNA87119304671193152Rat
1307526SltmSAFB-like, transcription modulator87121599571261821Rat
1311456Mindy2MINDY lysine 48 deubiquitinase 287126827471327698Rat
7601035LOC102551907uncharacterized LOC10255190787127464871325291Rat
2032Adam10ADAM metallopeptidase domain 1087134600871477889Rat
3009Lipclipase C, hepatic type87150963371635663Rat
41172046LOC120094202uncharacterized LOC12009420287151847671528853Rat
1595952Hax1-ps5HCLS1 associated protein X-1, pseudogene 587169691671697860Rat
68433Aqp9aquaporin 987179723171837485Rat
620250Aldh1a2aldehyde dehydrogenase 1 family, member A287187785071957107Rat
619847Polr2mRNA polymerase II subunit M87213199272139423Rat
41189379LOC120094203uncharacterized LOC12009420387215531272169017Rat
1359197Myzapmyocardial zonula adherens protein87215581772243036Rat
11457738Dynll1-ps1dynein light chain LC8-type 1, pseudogene 187225148472252556Rat
1304623Cgnl1cingulin-like 187227340172424842Rat
3829Tcf12transcription factor 1287249044772799265Rat
40960317LOC120094424U6 spliceosomal RNA87280993872810046Rat
11488967LOC108351742uncharacterized LOC10835174287288524372897708Rat
7601784LOC102546620uncharacterized LOC10254662087296272472992449Rat
1560796Zfp280dzinc finger protein 280D87299265573080482Rat
11423940Rpl35-ps6ribosomal protein L35, pseudogene 687313147973133010Rat
1549718Mns1meiosis-specific nuclear structural 187314887773169570Rat
1304772Tex9testis expressed 987316851973213935Rat
7743740Ccnd3-ps1cyclin D3, pseudogene 187320523373206228Rat
9295730LOC103693140uncharacterized LOC10369314087321359673243325Rat
1308795Rfx7regulatory factor X, 787325405173339209Rat
3157Nedd4NEDD4 E3 ubiquitin protein ligase87338409573468951Rat
6503470LOC100909416uncharacterized LOC10090941687347203273480590Rat
1592006Nup35-ps1nucleoporin 35, pseudogene 187349529673496387Rat
1592005Rps7-ps9ribosomal protein S7, pseudogene 987350358673504605Rat
41397485LOC120094402U6 spliceosomal RNA87350529373505397Rat
1307157Prtgprotogenin87354844073657945Rat
41295147LOC120094206uncharacterized LOC12009420687360591973609924Rat
41030394LOC120094466small nucleolar RNA SNORA2/SNORA34 family87362301873623153Rat
1594620Pygo1pygopus family PHD finger 187366621073684873Rat
1549760Dnaaf4dynein axonemal assembly factor 487369639473711315Rat
41382517LOC120094409U6 spliceosomal RNA87370819773708302Rat
1594626Pierce2piercer of microtubule wall 287371538373719849Rat
1311261Ccpg1cell cycle progression 187371996073752437Rat
2325480Mir628microRNA 62887373984673739929Rat
1307251Pigbphosphatidylinositol glycan anchor biosynthesis, class B87375175673775679Rat
6502569Pigbos1PIGB opposite strand 187377573273780102Rat
620918Rab27aRAB27A, member RAS oncogene family87378273073836630Rat
1311617Khdc3KH domain containing 3, subcortical maternal complex member87384234473844248Rat
1309784Rsl24d1ribosomal L24 domain containing 187385299173861996Rat
7552397LOC102554551uncharacterized LOC10255455187393106674263837Rat
40979767LOC120094208eukaryotic translation initiation factor 1-like87405655674068979Rat
628592Unc13cunc-13 homolog C87424702674697629Rat
6489473LOC10091202760S ribosomal protein L27-like87470404674704469Rat
1563550Wdr72WD repeat domain 7287483833875020938Rat
41104669LOC120094209uncharacterized LOC12009420987493527074941494Rat
41045535Npm1-ps4nucleophosmin 1, pseudogene 487503672775037582Rat
11500987LOC108351747uncharacterized LOC10835174787535503675369526Rat
41024479LOC120094477small nucleolar RNA SNORA4887548632275486467Rat
7736108LOC102549203uncharacterized LOC10254920387558484375590148Rat
2811Onecut1one cut homeobox 187559943275633598Rat
1310552Atosaatos homolog A87569482875772565Rat
71054Arpp19cAMP-regulated phosphoprotein 1987577964075802474Rat
3143Myo5amyosin VA87581198575980049Rat
1309994Myo5cmyosin VC87598949776066485Rat
41342803LOC120094537small nucleolar RNA U387599768175997765Rat
620759Gnb5G protein subunit beta 587607612076105069Rat
621015Bcl2l10Bcl2-like 1087610732676113373Rat
62087Mapk6mitogen-activated protein kinase 687614665076169767Rat
7701876LOC102551227uncharacterized LOC10255122787617741376181522Rat
1549772Leo1LEO1 homolog, Paf1/RNA polymerase II complex component87619954776223983Rat
6487844LOC100912347RNA polymerase-associated protein LEO1-like87622459976242856Rat
1311030Tmod3tropomodulin 387624897876310855Rat
61948Tmod2tropomodulin 287631673676366003Rat
1304585Lysmd2LysM domain containing 287637898476394396Rat
621209Scg3secretogranin III87639977776442015Rat
41304021LOC120094210uncharacterized LOC12009421087647624076510654Rat
1305979Bmp5bone morphogenetic protein 587651716476639925Rat
1565090Hmgcll13-hydroxy-3-methylglutaryl-CoA lyase like 187675730176887300Rat
1565220GfralGDNF family receptor alpha like87691789476963258Rat
41282450LOC120094480small nucleolar RNA SNORA4887692356876923709Rat
2788Hcrtr2hypocretin receptor 287698983477105953Rat
1311988Fam83bfamily with sequence similarity 83, member B87728735177363795Rat
41289644LOC120094498small nucleolar RNA SNORA1787753279877532927Rat
1359482Tinagtubulointerstitial nephritis antigen87780003177885077Rat
41300456LOC120094535U2 spliceosomal RNA87783662177836773Rat
1590513Mlipmuscular LMNA-interacting protein87793508778204725Rat
1549773Lrrc1leucine rich repeat containing 187823989778407347Rat
41110620LOC120094211uncharacterized LOC12009421187843298178450185Rat
11378963LOC108351748uncharacterized LOC10835174887845769978515167Rat
1560540Klhl31kelch-like family member 3187851551478538873Rat
41316372Rpl27a-ps7ribosomal protein L27a, pseudogene 787861910978626011Rat
619868Gclcglutamate-cysteine ligase, catalytic subunit87862989978668547Rat
620583Elovl5ELOVL fatty acid elongase 587879084678857307Rat
41078549LOC120094500small nucleolar RNA SNORA1787888720378887330Rat
61852Gcm1glial cells missing transcription factor 187892568778938924Rat
40952924LOC120094539U4 spliceosomal RNA87893614678936293Rat
1593343Gapdh-ps10Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 1087893957878944018Rat
1310374Fbxo9f-box protein 987895848278984015Rat
71050Cilk1ciliogenesis associated kinase 187898407579042695Rat
1306318Rpl12-ps1ribosomal protein L12, pseudogene 187905946479060196Rat
1309970Gsta4glutathione S-transferase alpha 487906696779084193Rat
1593189Gsta5glutathione S-transferase alpha 587910556179117472Rat
41320357LOC120094562U6 spliceosomal RNA87917794879178051Rat
2754Gsta2glutathione S-transferase alpha 287918453579196827Rat
1305838Dppa5developmental pluripotency associated 587921534179217282Rat
1311103Ooepoocyte expressed protein87922338879224554Rat
1586947Ddx43DEAD-box helicase 4387925500179284468Rat
2321966Trappc14l1trafficking protein particle complex subunit 14 like 187929077079299825Rat
1586939Cgascyclic GMP-AMP synthase87929228279306998Rat
1308830Mto1mitochondrial tRNA translation optimization 187930968179335231Rat
67387Eef1a1eukaryotic translation elongation factor 1 alpha 187934155479344784Rat
1311388Slc17a5solute carrier family 17 member 587939441679429387Rat
1311287Cd109CD109 molecule87945448079569195Rat
41375214Myl6-ps2myosin light chain 6, pseudogene 287962273779623115Rat
1592002Ybx1-ps10Y box binding protein 1, pseudogene 1087986189179870816Rat
41205198LOC120094378uncharacterized LOC12009437888011436080118155Rat
2324749Dynll1l2dynein light chain LC8-type 1 like 288032178380322046Rat
41328102LOC120094401U6 spliceosomal RNA88048534080485445Rat
1585750Rps3a-ps10ribosomal protein S3a, pseudogene 1088051301780513751Rat
2374Col12a1collagen type XII alpha 1 chain88054759280665665Rat
9394113Sec61gl1Sec61 translocon subunit gamma like 188070102980710125Rat
68365Cox7a2cytochrome c oxidase subunit 7A288071682480720922Rat
1303315Tmem30atransmembrane protein 30A88072874980757197Rat
628597Filip1filamin A interacting protein 188076128380956556Rat
41029882LOC120094506small nucleolar RNA SNORA1788084796080848092Rat
9159669LOC1036904855'-nucleotidase domain-containing protein 2 pseudogene88094884780950737Rat
1304565Senp6SUMO specific peptidase 688098867581071606Rat
1560646Myo6myosin VI88108715781242022Rat
620499Impg1interphotoreceptor matrix proteoglycan 188124362481389722Rat
2846Htr1b5-hydroxytryptamine receptor 1B88251357282534670Rat
11422632LOC108351750uncharacterized LOC10835175088256881482571906Rat
1583682Mei4meiotic double-stranded break formation protein 488276566182939649Rat
7661831LOC102553441uncharacterized LOC10255344188285505282951281Rat
41267224LOC120094494small nucleolar RNA SNORA1788314323483143365Rat
1562068Tpt1-ps4tumor protein, translationally-controlled 1 pseudogene 488369079183691589Rat
1305012Irak1bp1interleukin-1 receptor-associated kinase 1 binding protein 188373151283748289Rat
1564964Phippleckstrin homology domain interacting protein88377680283891192Rat
11465908LOC108351752uncharacterized LOC10835175288389783283933298Rat
41087330LOC120094214uncharacterized LOC12009421488400250984013022Rat
1359106Hmgn3high mobility group nucleosomal binding domain 388402249384059329Rat
7638023LOC102554276uncharacterized LOC10255427688419319184195615Rat
7565272LOC102554337uncharacterized LOC10255433788420394784216610Rat
1308555Lca5lebercilin LCA588430769684375025Rat
40968517Rps18-ps9ribosomal protein S18, pseudogene 988440540484413636Rat
1591931Sh3bgrl2SH3 domain binding glutamate-rich protein like 288446101984553124Rat
41362891LOC120094469small nucleolar RNA SNORA3288461557284615693Rat
11519521LOC108351754uncharacterized LOC10835175488463421784651606Rat
1561808Rpl12l1ribosomal protein L12 like 188466886184669316Rat
1592001Psma3-ps2proteasome 20S subunit alpha 3, pseudogene 288468696984687667Rat
1561944Rpl32l4ribosomal protein L32 like 488469112884692042Rat
1305630Elovl4ELOVL fatty acid elongase 488470291684729466Rat
1305558TtkTtk protein kinase88475432984792653Rat
11402458LOC108351756uncharacterized LOC10835175688480554184813217Rat
7534926LOC102557516uncharacterized LOC10255751688483955284845198Rat
2197Bckdhbbranched chain keto acid dehydrogenase E1 subunit beta88484526485027812Rat
41324543LOC120094530U2 spliceosomal RNA88512457585124688Rat
1560917Mrpl41l1mitochondrial ribosomal protein L41 like 188519488885195617Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10168D8Wox585808190958082156Ratregion
10354D8Bord123085541543055415660Ratregion
33880D8Mit1212485489451654894646Ratregion
33957D8Mit1622285848226258482492Ratregion
34152D8Mgh1715086934919469349344Ratregion
34152D8Mgh1715086934919469349344Ratregion
34310D8Mgh414988246075882460899Ratregion
34415D8Mgh614486129029861290444Ratregion
11444D8Mgh512886764887467649003Ratregion
35987D8Rat3016387038613270386295Ratregion
36161D8Rat3617085423764454237814Ratregion
36390D8Mgh1985859738058597503Ratregion
36390D8Mgh1985859738058597538Ratregion
37246D8Rat7821485872868658728950Ratregion
37310D8Rat9312686628506166285179Ratregion
37324D8Rat7513788536507785365202Ratregion
35246D8Rat3416386508345265083613Ratregion
35248D8Rat2617287531177775311938Ratregion
35421D8Rat2815886355446763554627Ratregion
36809D8Rat2314787732119177321328Ratregion
36930D8Rat2715686767115867671305Ratregion
37036D8Rat3316486991024069910402Ratregion
37160D8Rat3213087283048772830597Ratregion
36416D8Rat3123987230571272305951Ratregion
34763D8Rat6213886627389966274009Ratregion
34947D8Rat2216187939519479395351Ratregion
35014D8Rat2411987813815878138314Ratregion
35905D8Rat2114988292552182925667Ratregion
39758D8Rat14124986178770261787963Ratregion
39836D5Rat17923486548256365482813Ratregion
39880D8Rat14310086225062562250727Ratregion
39932D8Rat14420186456228064562476Ratregion
38018D8Rat9619987549650775496705Ratregion
38040D8Rat8415486886240268862554Ratregion
38124D8Rat10817386866863968668808Ratregion
38158D8Rat10221888461932984619547Ratregion
38226D8Rat9718186290337362903575Ratregion
38226D8Rat9718186290337362903614Ratregion
38330D8Rat8715087488138674881536Ratregion
40420D8Rat19516687103563671035802Ratregion
40496D8Rat18416686114577161145933Ratregion
40544D8Rat15539085507052455070905Ratregion
38454D8Rat7913486870951468709640Ratregion
38586D8Rat19424987521758175217836Ratregion
38670D8Rat11411987051350370513614Ratregion
40072D8Rat15115185727859757278740Ratregion
40094D8Rat14512687522295675223076Ratregion
40160D8Rat17917286750777867507950Ratregion
40338D8Rat14814585601656656016695Ratregion
38820D8Rat8819687310699073107186Ratregion
38860D8Rat10124586811305968113292Ratregion
38900D8Rat7421986786035967860578Ratregion
38944D8Rat9123886217323662173468Ratregion
39454D8Rat15020385658066156580874Ratregion
39574D8Rat13924287920677279207003Ratregion
39574D8Rat13924287920677279207003Ratregion
42221D8Arb1125085808189358082149Ratregion
42223D8Arb1239085458029854580749Ratregion
42225D8Arb1328188453127684531599Ratregion
42227D8Arb1513286813343968133571Ratregion
42856D8Rat21321685873043958730647Ratregion
42858D8Rat21213586296769062967819Ratregion
42859D8Rat20920786518004865180276Ratregion
42860D8Rat23614687518740975187579Ratregion
42861D8Rat18313487148936971489487Ratregion
42863D8Rat17821087647486676475064Ratregion
42865D8Rat18132786800027168000591Ratregion
42867D8Rat23420586958227769582478Ratregion
42869D8Rat17734388152287681523213Ratregion
41360D8Rat14614686935259669352742Ratregion
41360D8Rat14614686935259669352742Ratregion
41454D8Rat14913985552387755524028Ratregion
41472D8Rat15620185434587054346093Ratregion
40946D8Rat14015487041131570411476Ratregion
41046D8Rat13829188491193184912228Ratregion
41648D8Rat18523786110168061101909Ratregion
41712D8Rat18220887230948372309697Ratregion
41794D8Rat20522988213076382131000Ratregion
41854D8Rat20623286878563768785872Ratregion
41880D8Rat21121086748044867480652Ratregion
44423D8Got8617485519068555190859Ratregion
44423D8Got8617485519075355190859Ratregion
44425D8Got8325985532844655328691Ratregion
44426D8Got8526285494990154950163Ratregion
44432D8Got8816785583338155833548Ratregion
44434D8Got8429385601641156016704Ratregion
44435D8Got8215085620964256209793Ratregion
44436D8Wox215885805187058052006Ratregion
44439D8Got9320086081690160817101Ratregion
44440D8Got9721586205273462052949Ratregion
44442D8Got9617586204727362047448Ratregion
44443D8Got9225886081618560816443Ratregion
44445D8Got9925586305163063051883Ratregion
44446D8Got10125986363497163635232Ratregion
44447D8Got10225786437670764376963Ratregion
44451D8Got21623186673029666730527Ratregion
44452D8Got10514886820256768202713Ratregion
44454D8Got10712286804488168045003Ratregion
44455D8Got11015086872650068726650Ratregion
44456D8Got10919986871364968713848Ratregion
44457D8Got10825186989220969892462Ratregion
44458D8Got11123086898586368986093Ratregion
44459D8Got11218787078834070788531Ratregion
44460D8Got20320887105170871051915Ratregion
44463D8Wox2011987188814671888253Ratregion
44465D8Got11320587239325472393459Ratregion
44466D8Got11619087518104575181342Ratregion
44466D8Got11619087518115275181342Ratregion
44467D8Got20419787537094475371143Ratregion
44468D8Got11516087354629973546454Ratregion
44469D8Got11921187780997577810186Ratregion
44471D8Got12028087674004176740321Ratregion
44472D8Got12117787887695378877118Ratregion
44475D8Got12315488071177880711932Ratregion
44476D8Got12519688010971180109907Ratregion
44477D8Got12417588039632080396495Ratregion
44478D8Got12624888001175280012002Ratregion
44479D8Got12716088039633480396494Ratregion
44481D8Got13223188446771684467941Ratregion
44482D8Got12818188169855781698738Ratregion
44483D8Got13024888287206282872307Ratregion
60641D8Got9016586091264460912806Ratregion
60642D8Got9127186085377460854042Ratregion
60592D8Got10022486306554663065768Ratregion
60595D8Got12920688311738383117588Ratregion
60614D8Got20227385909445059094723Ratregion
625826D8Got10425086686951366869763Ratregion
625827D8Got10611086804488368044993Ratregion
1631160D8Wox3016585541543255415597Ratregion
1631672D8Got33516687159548071595646Ratregion
1631837D8Wox1685458049854580715Ratregion
1632233D8Got32126188349617683496431Ratregion
1633627D8Wox3126187071232870712589Ratregion
1638919D8Got30724987105171171051959Ratregion
1639640D8Got35217785651321056513382Ratregion
1641627D8Mco225286371336663714054Ratregion
1632834D8Got34019086794849467948686Ratregion
1640489D8Got35727085812831358128583Ratregion
1640669D8Got30514086936107769361219Ratregion
1640669D8Got30514086936107769361219Ratregion
1635206D8Got30327285831407558314345Ratregion
1635646D8Got31617187351640273516573Ratregion
1635818D8Got34512285908677559086897Ratregion
1636028D8Got30416685808516358085329Ratregion
1636590D8Wox3385808266458082802Ratregion
1637544D8Got33913787130660771306744Ratregion
1638260D8Got32323486479192064792149Ratregion
1634113D8Wox2922685541735855417584Ratregion
1634613D8Got30613986982701169827150Ratregion
7205900UniSTS:488216087851688478516993Ratregion
7205900UniSTS:488216087851688478516999Ratregion
7192338Crabp165485515146055152114Ratregion
7193074Chrnb422785541775955417987Ratregion
7205890px-31g711286920839569208507Ratregion
7206078Cox5a20685793023457931589Ratregion
7206420stm95tctg-3B107788374690783748601Ratregion
5035777PMC166422P133288253307882533410Ratregion
5035883PMC27916P115085843407358434223Ratregion
5035943PMC316377P129587560054975600844Ratregion
5038680BE13284114785660625756606404Ratregion
5038682RH12680423986587706365877302Ratregion
5036123UniSTS:14138214785793293257933698Ratregion
5036125Crabp117385515201155152184Ratregion
5038882RH12738719886035022160350419Ratregion
5038884RH12738822085424784854248068Ratregion
5038890RH12739120385781670157816904Ratregion
7206538UniSTS:546976100687333590073336906Ratregion
5036253D9Mit31913887813814778138287Ratregion
5036376Itga2088137050081371432Ratregion
5039294RH12762418285972677959726961Ratregion
5036402Madh319586423656464236759Ratregion
5036697AU04890614085919917759199317Ratregion
5036793AU04922417285574213755742309Ratregion
5037019AU04994216586987292469873091Ratregion
5035528Clom27185472226254722533Ratregion
5035560RPLP18886239518362395271Ratregion
5035639STS-F0391210386031568260315785Ratregion
5035683SGC3134313187577161675771747Ratregion
5031320PMC137013P310787769691577697022Ratregion
5025974RH13041621987371099473711213Ratregion
5026054RH13072719687383522273835418Ratregion
5026102RH13092019287569882475699016Ratregion
5028679RH9171413086254614062546270Ratregion
5028739A002A4515486707006567070219Ratregion
5034149RH14155219186333488863335079Ratregion
5034151RH14156020786558297265583179Ratregion
5026166RH13116620286600827566008477Ratregion
5028873RH14265012685796060957960735Ratregion
5031592AU04781517385572823255728400Ratregion
5031648AU04761019886799293267993125Ratregion
5031684AU04749419685772154457721735Ratregion
5034301Brp44l10186355106563551166Ratregion
5026306RH13170519286543462965434821Ratregion
5031790AU04713818286920300969203191Ratregion
5026434RH13219622086763692467637144Ratregion
5026536RH13258719486746195767462151Ratregion
5031884AU04683127288311733683117588Ratregion
5026598RH13282418085862798258628162Ratregion
5029279RH14419523086766048467660714Ratregion
5029373RH14455021886123492661235144Ratregion
5032032AU0291269585574413055744225Ratregion
5032115RH9444518985810154658101735Ratregion
5034746BI27678011087929501779295127Ratregion
5032331RH13562526185927553159275792Ratregion
5035162AA94358019586581430465814499Ratregion
5035432AI05931120985855645658556665Ratregion
5035460BQ19364917588475417084754344Ratregion
5029765BI28467615987885693778857096Ratregion
5032553SGC3375312686959572469595850Ratregion
5032589RH13456518085756626557566445Ratregion
5032629RH13471122086783439167834611Ratregion
5032681RH13490218486707832667078510Ratregion
5027383AV35821311185510172255101833Ratregion
5027385AI31652319986618384966184048Ratregion
5027387AV27300114186359922463599365Ratregion
5032723RH13506518887374923773749425Ratregion
5035254AA87502510985515914555159254Ratregion
5030071AI60249018786522509965225286Ratregion
5030183BE10480817188501065285010823Ratregion
5025056BB09676014086590852865908668Ratregion
5025060AW55582111587614668076146795Ratregion
5027613AI50712113686783100767831143Ratregion
5030277BE11178815087065754570657695Ratregion
5030279BE09986616886290432462904492Ratregion
5033063RH13745421487562676775626981Ratregion
5033091RH13755815186593150765931659Ratregion
5025184RH12733919088334926483349454Ratregion
5027799RH947867687150968471509760Ratregion
502790126.MMHAP76FRA11.seq15287658394476584096Ratregion
5033211RH13799118485902058359020767Ratregion
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5081715BF40860721586839614068396355Ratregion
5081715BF40860721586846801168468226Ratregion
5081891BF41522415485812162558121779Ratregion
5085894BE09893515485893888958939043Ratregion
5086032BM39189121385755020157550414Ratregion
5083992AI40687518587000238270002567Ratregion
5502699IREB248785529881555299302Ratregion
5503462MAPK6_180.284587614744176148286Ratregion
5507589Amel88085733243557333315Ratregion
5503382KS20710687368914073689246Ratregion
5503480UniSTS:46269051387560023475600747Ratregion
5503712MYO9A_848977886034832360349101Ratregion
5507618D11Bhm13454587122563471226179Ratregion
5503579UniSTS:46466111985843251158432901Ratregion
5503631Onecut19587562638175626476Ratregion
5503748UniSTS:46981522386362533063625553Ratregion
5503976UniSTS:257092085842281058424326Ratregion
5504234RH4898313786000574660005883Ratregion
5504322D15S726E086592708165927856Ratregion
5504540PMC291882P119485808040058080594Ratregion
5504944AY07488738585534005455340439Ratregion
5504938Stra611185856868758568798Ratregion
5504955Prtg087365143673652314Ratregion
5505945UniSTS:49664219087651723476517424Ratregion
5506025UniSTS:49748482585501021655011041Ratregion
5505678UniSTS:489236163687040793170409567Ratregion
5505728UniSTS:491331127988253219882533477Ratregion
5506317UniSTS:474701085843244158433521Ratregion
5506917G4792621487161932271619536Ratregion
5506999fi36g02.x148586304969863050183Ratregion
5507039fb10e01.x116187332242973322582Ratregion
5507165UniSTS:22489915287639418276394334Ratregion
5500013UniSTS:23613726485510146655101730Ratregion
5500015UniSTS:23615130285900759059007892Ratregion
5500017UniSTS:23613531285559072255591034Ratregion
5500019UniSTS:23617110886663029166630399Ratregion
5500101UniSTS:23676122885738038657380614Ratregion
5499563G6493257486955377569554349Ratregion
5499729UniSTS:23434312488519504885195172Ratregion
5500667RH13658920486754818567548389Ratregion
5501840MARC_15335-15336:1013436983:1103488384165483842688Ratregion
5501984MARC_21804-21805:1025095690:111885906181559062454Ratregion
5502924Rpp2584985790764057908489Ratregion
5500587RH13609816885815284858153016Ratregion
5500489RH12654818588451346284513647Ratregion
5500493RH12655622286668212366682345Ratregion
5500745G1986915486707006567070219Ratregion
5503492Cyp1a129685809897458099270Ratregion
5501031PMC124268P188788123730181238188Ratregion
5501201PMC15407P130185810002958100655Ratregion
5501285D4S232517788051363780513814Ratregion
5501117PMC140651P27885842738758427465Ratregion
5504700PMC56999P140787651725176517658Ratregion
5505149Islr2113085861016458611294Ratregion
5505151Lingo1123685701245057013686Ratregion
5501506STS-Z4109065387106806371068716Ratregion
5505516PE5L-LSB37986421665664217035Ratregion
5502688Cgnl1087227622672277457Ratregion
5506775G4527318185577391755774098Ratregion
5502347RH1245608285499018754990269Ratregion
5502202GDB:58061420188253262382532824Ratregion
5502411RH12475512485646574156465865Ratregion
11528641rs19705624688122403181224031Ratregion
11528642rs19873805588080233280802332Ratregion
11528643rs19838095988166447381664473Ratregion
Position Markers

Flank 1: (D8Rat36)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2854,237,644 - 54,237,814 (+)MAPPER
Rnor_6.0858,425,510 - 58,425,679NCBI
Rnor_5.0857,006,784 - 57,006,953UniSTS
RGSC_v3.4857,308,572 - 57,308,742RGD
RGSC_v3.4857,308,573 - 57,308,742UniSTS
RGSC_v3.1857,327,627 - 57,327,796RGD
RH 3.4 Map8589.1UniSTS
RH 3.4 Map8589.1RGD
RH 2.0 Map8457.2RGD
SHRSP x BN Map841.2RGD
FHH x ACI Map848.36RGD
Peak: (D8Rat36)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2854,237,644 - 54,237,814 (+)MAPPER
Rnor_6.0858,425,510 - 58,425,679NCBI
Rnor_5.0857,006,784 - 57,006,953UniSTS
RGSC_v3.4857,308,572 - 57,308,742RGD
RGSC_v3.4857,308,573 - 57,308,742UniSTS
RGSC_v3.1857,327,627 - 57,327,796RGD
RH 3.4 Map8589.1UniSTS
RH 3.4 Map8589.1RGD
RH 2.0 Map8457.2RGD
SHRSP x BN Map841.2RGD
FHH x ACI Map848.36RGD
Flank 2: (D8Rat75)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2885,365,077 - 85,365,202 (+)MAPPER
Rnor_6.0891,990,411 - 91,990,535NCBI
Rnor_5.0891,507,104 - 91,507,228UniSTS
RGSC_v3.4889,558,869 - 89,558,994RGD
RGSC_v3.4889,558,870 - 89,558,994UniSTS
RGSC_v3.1889,578,325 - 89,578,449RGD
Celera885,001,973 - 85,002,097UniSTS
RH 3.4 Map8980.5UniSTS
RH 3.4 Map8980.5RGD
RH 2.0 Map8772.8RGD
SHRSP x BN Map849.39RGD
FHH x ACI Map859.0899RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83085640475856404Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)84186687686866876Rat
11556286Cm81Cardiac mass QTL 810.01heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)83084815461290444Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84269268490165460Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83173772976737729Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83558203280582032Rat
4889938Bss89Bone structure and strength QTL 893.8tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)85009524982460899Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)830848154101699754Rat
1300146Rf17Renal function QTL 172.9renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)82824291273242912Rat
8662823Vetf5Vascular elastic tissue fragility QTL 51.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)82824291299525068Rat
2313088Bss75Bone structure and strength QTL 753.10.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)83084815482460899Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)869349194112783834Rat
1358896Bp262Blood pressure QTL 2622.89arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)82720571599103503Rat
731182Uae24Urinary albumin excretion QTL 246.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)81933115293965294Rat
1300150Cm3Cardiac mass QTL 33.97heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)85423781455523877Rat
724514Uae15Urinary albumin excretion QTL 152.9urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)82950266570386295Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)83084815461290444Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)871888757116888757Rat
631842Inf1Infertility severity QTL 14.10.001seminal gland mass (VT:0010524)seminal vesicle wet weight (CMO:0001603)82266233067662330Rat
737824Hcar10Hepatocarcinoma resistance QTL 102.9liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)84071306682925667Rat
1359033Bp273Blood pressure QTL 273arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815461290444Rat
1331769Rf39Renal function QTL 393.871urine output (VT:0003620)timed urine volume (CMO:0000260)84186687675097878Rat
61358Bp39Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83555193880551938Rat
1358906Bp253Blood pressure QTL 25340.0004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)84071306693965294Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)87531177784531599Rat
1358907Cm40Cardiac mass QTL 401.89heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)82720571599103503Rat
1331744Bp217Blood pressure QTL 2173.398arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815458482492Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)846531639119088626Rat
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)830848259105647037Rat
1582254Kidm31Kidney mass QTL 313kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)85423764485365202Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)876468691121468691Rat
10402857Bp380Blood pressure QTL 3800.95arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)85396876598968765Rat
1358892Kidm26Kidney mass QTL 263.69kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)82720571599103503Rat
631216Stl9Serum triglyceride level QTL 94.710.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)84186701070386132Rat
5684973Bss100Bone structure and strength QTL 1004.7tibia area (VT:1000281)tibia area measurement (CMO:0001382)85009524982460899Rat
1582243Bw66Body weight QTL 663.40.0048body mass (VT:0001259)body weight (CMO:0000012)85423764485365202Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)871888757116888757Rat
61373Mcs4Mammary carcinoma susceptibility QTL 41.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)81629044461290444Rat
2313057Bss76Bone structure and strength QTL 7630.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)83084815482460899Rat
12879878Bw183Body weight QTL 1830.001body mass (VT:0001259)body weight (CMO:0000012)84329616998968765Rat
1300177Cm2Cardiac mass QTL 23.65heart mass (VT:0007028)heart weight (CMO:0000017)854259986100382532Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
1549908Neudeg1Neurodegradation QTL 15.50nervous system integrity trait (VT:0010566)logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)83018886794457446Rat
12879879Cm99Cardiac mass QTL 990.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)84329616998968765Rat
2313067Bss77Bone structure and strength QTL 773.10.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)83084815482460899Rat
12879880Cm100Cardiac mass QTL 1000.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)84329616998968765Rat
12879881Cm101Cardiac mass QTL 1010.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)84329616998968765Rat
12879882Am8Aortic mass QTL 80.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)84329616998968765Rat
12879883Kidm65Kidney mass QTL 650.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)84329616998968765Rat
1358912Bw51Body weight QTL 512.95body mass (VT:0001259)body weight (CMO:0000012)851351728107062046Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)87531193882925521Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)870513503118219066Rat
2313086Bss60Bone structure and strength QTL 604.10.0001tibia length (VT:0004357)tibia length (CMO:0000450)85009524982460899Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)861290298119084929Rat
1558646Swd5Spike wave discharge measurement QTL 53.450.00036brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)81490675159906751Rat
2293697Bmd39Bone mineral density QTL 39femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)85404374498968765Rat
631648Stl5Serum triglyceride level QTL 540.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)82720571554998217Rat
1331837Bw23Body weight QTL 234.190.00007body mass (VT:0001259)body weight (CMO:0000012)84653172299083736Rat
1331838Niddm61Non-insulin dependent diabetes mellitus QTL 613.530.0004blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83646953599083736Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
11528644Bss115Bone structure and strength QTL 1156.563e-07femur morphology trait (VT:0000559)femur head width (CMO:0002717)88080233281664473Rat
631653Bp125Blood pressure QTL 1253.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)866142385111142385Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat
631271Lecl1Lens clarity QTL 10.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)81898416884531599Rat
2303564Gluco43Glucose level QTL 433blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)82613018771130187Rat
2303570Gluco48Glucose level QTL 482blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)84980583194805831Rat
2313046Bss78Bone structure and strength QTL 783.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)83084815482460899Rat
2303572Insul13Insulin level QTL 132blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)82613018771130187Rat
2301402Bp316Blood pressure QTL 3160.005arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)85396876598968765Rat
631664Hcar3Hepatocarcinoma resistance QTL 32.90.0005liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)85423764499103503Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)871888757116888757Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)882460758122812818Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general rats were on a high sucrose diet (HSD; 70% calories as sucrose) for 1 week; while still on sucrose diet, dexamethasone (DEX) was given in drinking water (0.026mg/ml) for 3 days then animals were killed and the kidneys were weighed 1580752
qtl_statistics_details specific pairs of variables were compared by one or two way ANOVA with post hoc Tukey's honest significance difference test 1580752