Gluco22 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Gluco22 (Glucose level QTL 22) Rattus norvegicus

Symbol: Gluco22
Name: Glucose level QTL 22
RGD ID: 1582236
Previously known as: Glucose (sucrose diet, 120min)
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: blood glucose level   (CMO:0000046)    
LOD Score: 3.3
P Value: 0.0164
Variance: 15.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21473,415,323 - 92,554,092RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01478,172,765 - 102,549,388RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01478,146,760 - 102,294,177RGDRnor5.0
RGSC_v3.41478,978,644 - 99,080,020RGDRGSC3.4
RGSC_v3.11454,099,165 - 99,099,165RGD
Cross Type: intercross
Strains Crossed: PD/Cub BN/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/Cub  (IEA)
PD/Cub  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Dynamic genetic architecture of metabolic syndrome attributes in the rat. Seda O, etal., Physiol Genomics. 2005 Apr 14;21(2):243-52. Epub 2005 Feb 22.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1310417Evc2EvC ciliary complex subunit 2147336683273454539Rat
735186EvcEvC ciliary complex subunit 1147345618173498955Rat
2407Crmp1collapsin response mediator protein 1147350993373556192Rat
40960445Glo1-ps1glyoxalase 1, pseudogene 1147353484973535402Rat
7596857C14h4orf50similar to human chromosome 4 open reading frame 50147356120973646151Rat
1562401Jakmip1janus kinase and microtubule interacting protein 1147364629973766830Rat
41012300LOC120096861U4 spliceosomal RNA147379667773796760Rat
68954Wfs1wolframin ER transmembrane glycoprotein147381047873834993Rat
620920Ppp2r2cprotein phosphatase 2, regulatory subunit B, gamma147384654773931489Rat
1308840Man2b2mannosidase, alpha, class 2B, member 2147396907973994089Rat
628631Mrfap1Morf4 family associated protein 1147400251274004289Rat
1306037Bloc1s4biogenesis of lysosomal organelles complex 1 subunit 4147404302574044325Rat
9097301LOC103693769uncharacterized LOC103693769147404977374055535Rat
1596848Kiaa0232KIAA0232 homolog147409442174159316Rat
41112705LOC120096818small nucleolar RNA SNORA17147411668774116816Rat
41082880LOC120096639uncharacterized LOC120096639147417208674176212Rat
1309993Tbc1d14TBC1 domain family, member 14147417265274272182Rat
7635591Selenok-ps3selenoprotein K, pseudogene 3147420420174204999Rat
1305153Ccdc96coiled-coil domain containing 96147427656874279072Rat
1561605Tada2btranscriptional adaptor 2B147427928674290758Rat
70947Grpel1GrpE-like 1, mitochondrial147429202374298243Rat
1310621Sorcs2sortilin-related VPS10 domain containing receptor 2147437108974735943Rat
1307368Psapl1prosaposin-like 1147454464674547206Rat
619959Afap1actin filament associated protein 1147474332274856300Rat
1303094Ablim2actin binding LIM protein family, member 2147486540974990334Rat
1305610Sh3tc1SH3 domain and tetratricopeptide repeats 1147500569175050001Rat
1308120Htra3HtrA serine peptidase 3147506891775097315Rat
69245Acox3acyl-CoA oxidase 3, pristanoyl147513398675176767Rat
1308380Trmt44tRNA methyltransferase 44147517533175204291Rat
620496Cpzcarboxypeptidase Z147522369275246946Rat
41086352LOC120096640uncharacterized LOC120096640147529460975296325Rat
1304928Hmx1H6 family homeobox 1147536120775364993Rat
2058Adra2cadrenoceptor alpha 2C147547088475472846Rat
2318741Ube2v1-ps2ubiquitin conjugating enzyme E2 V1, pseudogene 2147561744175619176Rat
620700Lrpap1LDL receptor related protein associated protein 1147565137175663380Rat
1566416Dok7docking protein 7147566544475699413Rat
70909HgfacHGF activator147570758875714182Rat
3564Rgs12regulator of G-protein signaling 12147571592575824012Rat
11503487Rps17l4ribosomal protein S17 like 4147578019275784552Rat
11489712Rgs12l1regulator of G-protein signaling 12 like 1147580977775810250Rat
41396070Trnap-agg61transfer RNA proline (anticodon AGG) 61147582503975825113Rat
7565325LOC102556834uncharacterized LOC102556834147582645175831905Rat
1565796Msantd1Myb/SANT DNA binding domain containing 1147583236875845687Rat
68337Htthuntingtin147584583675996094Rat
61858Grk4G protein-coupled receptor kinase 4147599855476080808Rat
1305605Nop14NOP14 nucleolar protein147608131376102454Rat
1311900Mfsd10major facilitator superfamily domain containing 10147610376276107385Rat
2041Add1adducin 1147610864376167267Rat
40938982LOC120096505uncharacterized LOC120096505147616736176176360Rat
1310588Sh3bp2SH3-domain binding protein 2147617609776213300Rat
41249459LOC120096774U1 spliceosomal RNA147620785276207995Rat
1307717Tnip2TNFAIP3 interacting protein 2147622835076245553Rat
1309634Fam193afamily with sequence similarity 193, member A147625010376382525Rat
41117376LOC120096838small nucleolar RNA U13147635049976350595Rat
3583Rnf4ring finger protein 4147640129276423270Rat
1564567Cfap99cilia and flagella associated protein 99147642392376468170Rat
9232718LOC103693090uncharacterized LOC103693090147643048676447245Rat
1310151Zfyve28zinc finger FYVE-type containing 28147646842476554039Rat
1305093Mxd4Max dimerization protein 4147656210576576224Rat
41218591LOC120096643uncharacterized LOC120096643147657959276580225Rat
7675413PolnDNA polymerase nu147657998376752460Rat
1591723Haus3HAUS augmin-like complex, subunit 3147658054976599542Rat
1305719Nat8lN-acetyltransferase 8-like147675607776762712Rat
1560394Nicol1NELL2 interacting cell ontogeny regulator 1147676814576769661Rat
1305556Nelfanegative elongation factor complex member A147680892076832998Rat
1307955Nsd2nuclear receptor binding SET domain protein 2147683317976911304Rat
1359678Letm1leucine zipper and EF-hand containing transmembrane protein 1147694264776982220Rat
41108877Rpl18-ps12ribosomal protein L18, pseudogene 12147695910076962041Rat
620714Fgfr3fibroblast growth factor receptor 3147698724277002671Rat
40952397LOC120096748U6 spliceosomal RNA147703748577037588Rat
1302948Tacc3transforming, acidic coiled-coil containing protein 3147705120977065343Rat
41246592LOC120096793small nucleolar RNA SNORA18147705648377056611Rat
1310828Tmem129transmembrane protein 129, E3 ubiquitin ligase147706539177070871Rat
1584682Slbpstem-loop histone mRNA binding protein147707144177081911Rat
1563315Fam53afamily with sequence similarity 53, member A147708817877124395Rat
1597116Psmb3-ps5proteasome 20S subunit beta 3, pseudogene 5147715196677153837Rat
1564874Nkx1-1NK1 homeobox 1147729667677300575Rat
1306371UvssaUV-stimulated scaffold protein A147730918877351922Rat
1309877Maeamacrophage erythroblast attacher, E3 ubiquitin ligase147735726177390683Rat
2441Ctbp1C-terminal binding protein 1147745558077482821Rat
708584Spon2spondin 2147750569577518001Rat
3713Slc5a1solute carrier family 5 member 1147755399077618589Rat
41320425LOC120096797small nucleolar RNA SNORA48147764235877642497Rat
3978Ywhahtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta147769633277705715Rat
41035330LOC120096506uncharacterized LOC120096506147772204177727496Rat
1311535Depdc5DEP domain containing 5, GATOR1 subcomplex subunit147773229777862924Rat
41039274LOC120096762U6 spliceosomal RNA147781364677813748Rat
2319299LOC100361879ATP synthase subunit epsilon, mitochondrial-like147786348077864135Rat
1305469Prr14lproline rich 14-like147786984877937141Rat
1596729Pisdphosphatidylserine decarboxylase147794192777991021Rat
1560636Sfi1SFI1 centrin binding protein147799096578048352Rat
1560908Eif4enif1eukaryotic translation initiation factor 4E nuclear import factor 1147805611578099846Rat
1588187Snrpg-ps1small nuclear ribonucleoprotein polypeptide G, pseudogene 1147806813678068530Rat
1304993Drg1developmentally regulated GTP binding protein 1147810387678119976Rat
1308337Patz1POZ (BTB) and AT hook containing zinc finger 1147815459078173032Rat
40971467LOC120096766U7 small nuclear RNA147818679478186857Rat
1311203Pik3ip1phosphoinositide-3-kinase interacting protein 1147820466878216616Rat
62056Limk2LIM domain kinase 2147820818278286106Rat
7740095Rpl7-ps1ribosomal protein L7, pseudogene 1147825252078253445Rat
1564777Rnf185ring finger protein 185147829251778329832Rat
1305323Pla2g3phospholipase A2, group III147836762578373913Rat
620541Inpp5jinositol polyphosphate-5-phosphatase J147837416178385305Rat
1565037Selenomselenoprotein M147839582678398429Rat
1310216Smtnsmoothelin147839859578420908Rat
11478544LOC108352784uncharacterized LOC108352784147847105578487135Rat
9685395Tug1taurine up-regulated 1147851989478526927Rat
1310842Morc2MORC family CW-type zinc finger 2147852960378571375Rat
1310505Osbp2oxysterol binding protein 2147858508878746785Rat
41090605LOC120096813small nucleolar RNA SNORA17147867492978675059Rat
7642008Hmgn1l3high mobility group nucleosome binding domain 1 like 3147875798478770849Rat
9366226LOC103693132transcription initiation factor IIA subunit 2 pseudogene147877623478776984Rat
1308775C14h5orf52similar to human chromosome 5 open reading frame 52147878131578789956Rat
1306929Dusp18dual specificity phosphatase 18147879018378811576Rat
708484Slc35e4solute carrier family 35, member E4147880332078810186Rat
620681Tcn2transcobalamin 2147881334378828549Rat
1559814Pes1pescadillo ribosomal biogenesis factor 1147885075478867134Rat
1583379Gal3st1galactose-3-O-sulfotransferase 1147886804978886402Rat
1565810Sec14l4SEC14-like lipid binding 4147891275078928799Rat
9463298LOC103693135uncharacterized LOC103693135147892594478927167Rat
41394454LOC120096646uncharacterized LOC120096646147893168378942634Rat
41214355Rpl9-ps25ribosomal protein L9, pseudogene 25147894299578943846Rat
620812Sec14l3SEC14-like lipid binding 3147894456878955608Rat
1359705Mtfp1mitochondrial fission process 1147896843478972274Rat
7704064LOC102549281uncharacterized LOC102549281147897362678990088Rat
621779Sec14l2SEC14-like lipid binding 2147897380578998480Rat
1310738Rnf215ring finger protein 215147900665979013091Rat
1584653Ccdc157coiled-coil domain containing 157147901243379031458Rat
1311477Sf3a1splicing factor 3A subunit 1147903139479052144Rat
1311641Tbc1d10aTBC1 domain family, member 10a147905182279083603Rat
1304774Castor1cytosolic arginine sensor for mTORC1 subunit 1147908613679090549Rat
1585012Osmoncostatin M147910363879108500Rat
620865LifLIF, interleukin 6 family cytokine147913104979140486Rat
41008473LOC120096858U4 spliceosomal RNA147920869279208868Rat
1565447Hormad2HORMA domain containing 2147921501379300447Rat
9071266LOC103693146non-histone chromosomal protein HMG-17 pseudogene147924762779248290Rat
41182224LOC120096841U2 spliceosomal RNA147925758779257761Rat
1310972Mtmr3myotubularin related protein 3147934052379460947Rat
1561422Ascc2activating signal cointegrator 1 complex subunit 2147950344979547801Rat
41308091Trnat-agu19transfer RNA threonine (anticodon AGU) 19147955217979552251Rat
1595126Uqcr10ubiquinol-cytochrome c reductase, complex III subunit X147956615179569017Rat
1559774Zmat5zinc finger, matrin type 5147956864479599595Rat
1359269Cabp7calcium binding protein 7147959882279609172Rat
3169Nf2NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor147962739979710709Rat
1310419Nipsnap1nipsnap homolog 1147973423479758101Rat
1304991Thoc5THO complex subunit 5147975880579792718Rat
41212773LOC120096770U7 small nuclear RNA147979888379798945Rat
41224647LOC120096767U7 small nuclear RNA147981769179817753Rat
41067315LOC120096768U7 small nuclear RNA147982574679825808Rat
3159Nefhneurofilament heavy chain147983036279840347Rat
2064Ap1b1adaptor related protein complex 1 subunit beta 1147987948279930778Rat
41389389Snord125small nucleolar RNA, C/D box 125147992596379926059Rat
41377061LOC120096647uncharacterized LOC120096647147994542579946151Rat
1306100Rasl10aRAS-like, family 10, member A147995509379956471Rat
1311206Gas2l1growth arrest-specific 2 like 1147995535079961830Rat
1307258Ewsr1EWS RNA-binding protein 1147996536579994108Rat
1311827Rhbdd3rhomboid domain containing 3147999411180000294Rat
1593795Emid1EMI domain containing 1148000048680043561Rat
620789Kremen1kringle containing transmembrane protein 1148008187080147489Rat
1593771Znrf3zinc and ring finger 3148015785480313456Rat
7673923LOC102549967uncharacterized LOC102549967148036874480377124Rat
1303073Xbp1X-box binding protein 1148039062980395713Rat
1561762Ccdc117coiled-coil domain containing 117148039923680409824Rat
41271824LOC120096814small nucleolar RNA SNORA17148042132880421443Rat
1592623Frg2FSHD region gene 2148042726080429560Rat
41214202LOC120096650uncharacterized LOC120096650148044524080451672Rat
735187Ankrd36ankyrin repeat domain 36148045169980568458Rat
1597115Kansl2-ps4KAT8 regulatory NSL complex subunit 2, pseudogene 4148053832180540654Rat
7574864Rpl18-ps8ribosomal protein L18, pseudogene 8148056501680565530Rat
1306014Mrps24mitochondrial ribosomal protein S24148058467180588801Rat
1564681Urgcpupregulator of cell proliferation148059463780638972Rat
11368922Ube2d4l-ps2ubiquitin-conjugating enzyme E2D 4 like, pseudogene 2148063897680661336Rat
70941Dbnldrebrin-like148066611580681155Rat
3313Pgam2phosphoglycerate mutase 2148068179680683907Rat
41205784LOC120096651uncharacterized LOC120096651148068845480691291Rat
1308247PolmDNA polymerase mu148070707580716677Rat
1306922Aebp1AE binding protein 1148073880080748878Rat
1304954Pold2DNA polymerase delta 2, accessory subunit148074897180755188Rat
11371864LOC108352788uncharacterized LOC108352788148076324380777436Rat
1308262Myl7myosin light chain 7148078068480783259Rat
2670Gckglucokinase148078506080829842Rat
41050910LOC120096653uncharacterized LOC120096653148079579280811073Rat
70897Ykt6YKT6 v-SNARE homolog148083218780843394Rat
2262Camk2bcalcium/calmodulin-dependent protein kinase II beta148084520680934172Rat
11520377LOC108352789uncharacterized LOC108352789148084778780852539Rat
1642416Nudcd3NudC domain containing 3148097633081059183Rat
1303135Npc1l1NPC1 like intracellular cholesterol transporter 1148107144881091113Rat
1597114Rpl13a-ps10ribosomal protein L13A, pseudogene 10148109939181100385Rat
1303195Ddx56DEAD-box helicase 56148111200881122331Rat
1306319Tmed4transmembrane p24 trafficking protein 4148112504981129646Rat
11469188LOC108352790ribosome biogenesis protein NSA2 homolog pseudogene148113038781131183Rat
41283680LOC120096751U6 spliceosomal RNA148113267581132780Rat
40974067Trnav-aac26transfer RNA valine (anticodon AAC) 26148113387081133942Rat
1561359Ogdhoxoglutarate dehydrogenase148115002181217479Rat
41003175LOC120096860U4 spliceosomal RNA148118697281187083Rat
1309256Zmiz2zinc finger, MIZ-type containing 2148125139181267936Rat
3372Ppiapeptidylprolyl isomerase A148127929281282960Rat
41036241LOC120096792small Cajal body-specific RNA 16148128506181285200Rat
1587865H2az2H2A.Z variant histone 2148129330481312209Rat
1559465Purbpurine rich element binding protein B148134237481344857Rat
2322065LOC10036049160S ribosomal protein L13-like148135664481357364Rat
9426172LOC103693157uncharacterized LOC103693157148137565781381037Rat
1306016Myo1gmyosin IG148138670181401843Rat
7606883LOC102547700uncharacterized LOC102547700148140579481408847Rat
41070336Snora9small nucleolar RNA, H/ACA box 9148140798881408120Rat
1308067Ccm2CCM2 scaffold protein148141841881464114Rat
41068558C1h11orf98-ps3similar to human chromosome 11 open reading frame 98, pseudogene 3148143572081436342Rat
1559824NacadNAC alpha domain containing148146529981473866Rat
1309737Tbrg4transforming growth factor beta regulator 4148148197781490781Rat
41127835LOC120096784small nucleolar RNA SNORA5148148671881486846Rat
41248356Snora5csmall nucleolar RNA, H/ACA box 5C148148721881487354Rat
621851Wapwhey acidic protein148150312381505244Rat
61873Ramp3receptor activity modifying protein 3148152740481544905Rat
1590593Ldha-ps24lactate dehydrogenase A, pseudogene 24148156049281563089Rat
40939875LOC120096856U4 spliceosomal RNA148156919181569303Rat
41369058LOC120096656uncharacterized LOC120096656148156997981575100Rat
1591457Eif6-ps1eukaryotic translation initiation factor 6, pseudogene 1148158411781585052Rat
41381223Hsp90ab1-ps12heat shock protein 90 alpha family class B member 1, pseudogene 12148168000481697410Rat
41192253LOC120096657uncharacterized LOC120096657148183277181839913Rat
1309318Adcy1adenylate cyclase 1148191124082020594Rat
40996974LOC120096658uncharacterized LOC120096658148195653581961881Rat
2872Igfbp1insulin-like growth factor binding protein 1148204741582052482Rat
2874Igfbp3insulin-like growth factor binding protein 3148205634782064083Rat
1586609Mospd1l1motile sperm domain containing 1 like 1148228693982289413Rat
2318182Apoo-ps3apolipoprotein O, pseudogene 3148248730382487888Rat
41202877LOC120096773U7 small nuclear RNA148268554882685609Rat
41149863LOC120096775U7 small nuclear RNA148268562382685685Rat
11457748LOC108352794uncharacterized LOC108352794148272684082779159Rat
41222219Hnrnpc-ps1heterogeneous nuclear ribonucleoprotein C, pseudogene 1148307259183073569Rat
1564174Tns3tensin 3148317364983405671Rat
41347538LOC120096660uncharacterized LOC120096660148329955083312397Rat
41280378LOC12009665960S ribosomal protein L36-like148337163683371941Rat
1564724Pkd1l1polycystin 1 like 1, transient receptor potential channel interacting148355296483670062Rat
1591976Hus1HUS1 checkpoint clamp component148368870283703466Rat
1591975Sun3Sad1 and UNC84 domain containing 3148371013683748982Rat
1587626C14h7orf57similar to human chromosome 7 open reading frame 57148374847883768293Rat
1305566Upp1uridine phosphorylase 1148380949583829299Rat
11402271LOC10835285860S ribosomal protein L35a pseudogene148385728083857747Rat
1305895Abca13ATP binding cassette subfamily A member 13148387339784376138Rat
41164776Gapdh-ps48Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 48148389039283895380Rat
1591358Tmem161bl1transmembrane protein 161B148399138583992860Rat
41078953LOC120096539uncharacterized LOC120096539148453086384531858Rat
11437269LOC108352797uncharacterized LOC108352797148487819784931496Rat
1563894Morf4l1-ps5mortality factor 4 like 1, pseudogene 5148495712984958164Rat
1589624Vwc2von Willebrand factor C domain containing 2148568367085825068Rat
41008896Rpl9-ps27ribosomal protein L9, pseudogene 27148571020685718895Rat
7662247LOC102552528uncharacterized LOC102552528148577231185787440Rat
1563985Zpbpzona pellucida binding protein148583097186030778Rat
41173477LOC120096788small nucleolar RNA SNORA24148598480185984933Rat
1309870Spmip7sperm microtubule inner protein 7148603042786085644Rat
41256134LOC120096664uncharacterized LOC120096664148603994486053196Rat
1597113Pgm1-ps1phosphoglucomutase 1, pseudogene 1148609106086093503Rat
1562979Ikzf1IKAROS family zinc finger 1148625506586340839Rat
40961538LOC120096666uncharacterized LOC120096666148636582486368551Rat
1307112Fignl1fidgetin-like 1148636867086381728Rat
2494Ddcdopa decarboxylase148637868586469189Rat
41028118LOC120096667uncharacterized LOC120096667148642547786445651Rat
1566234Grb10growth factor receptor bound protein 10148649505186602800Rat
7743232LOC102552764uncharacterized LOC102552764148661986086627072Rat
1312002Coblcordon-bleu WH2 repeat protein148682813787060682Rat
7502494LOC102553003uncharacterized LOC102553003148692803886948136Rat
11364710Trnar-ucu6transfer RNA arginine (anticodon UCU) 6148713816287138247Rat
41014043LOC120096821small nucleolar RNA SNORA17148731226387312390Rat
41054942LOC120096840small nucleolar RNA ACA64148732777187327909Rat
2320935Prmt1l1protein arginine methyltransferase 1 like 1148755116587552305Rat
11372689LOC108352800uncharacterized LOC108352800148755321287569267Rat
1582940Srbd1-ps1S1 RNA binding domain 1, pseudogene 1148786397287874151Rat
1561286Gapdh-ps102Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 102148800930188010396Rat
41168377LOC120096740U6 spliceosomal RNA148833653488336640Rat
7731769LOC102553529uncharacterized LOC102553529148848792688503110Rat
2323894Glo1-ps2glyoxalase 1, pseudogene 2148903118089037851Rat
40958885Gapdh-ps46Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 46148908863989089742Rat
2320735Pom121l12POM121 transmembrane nucleoporin-like 12148910853589109604Rat
2323556Rnf115-ps1ring finger protein 115, pseudogene 1148932518989326067Rat
41041262LOC120096789small nucleolar RNA SNORA44148934494589345050Rat
41021963Gapdh-ps47Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 47148952183889522809Rat
41062800LOC120096671uncharacterized LOC120096671149000679690019183Rat
1596197Vstm2aV-set and transmembrane domain containing 2A149066001290897561Rat
41311414Carhsp1-ps1calcium regulated heat stable protein 1, pseudogene 1149074204590752015Rat
1596170Sec61gSec61 translocon subunit gamma149089976690906143Rat
2543Egfrepidermal growth factor receptor149117697991349722Rat
1309073Fbxo48F-box protein 48149138085791382314Rat
1308269Plekpleckstrin149139701591429693Rat
41369426LOC120096673uncharacterized LOC120096673149145269291489124Rat
1308373Cnrip1cannabinoid receptor interacting protein 1149146287791492739Rat
69230Ppp3r1protein phosphatase 3, regulatory subunit B, alpha149155674391606391Rat
727882Pno1partner of NOB1 homolog149160971191618280Rat
1563863Dnaaf10dynein axonemal assembly factor 10149161864991639828Rat
1560600C1dC1D nuclear receptor corepressor149166095191673177Rat
2323208Hnrnpk-ps1heterogeneous nuclear ribonucleoprotein K, pseudogene 1149175662891758358Rat
41348836LOC120096676uncharacterized LOC120096676149189758991906807Rat
40984137LOC120096862U4 spliceosomal RNA149199894591999070Rat
1560957Etaa1ETAA1 activator of ATR kinase149229846192314044Rat
41018088LOC120096677uncharacterized LOC120096677149235369992358109Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10102D14Mco2285147546949375469784Ratregion
10102D14Mco2285147546949375470354Ratregion
10102D14Mco2285147546975275469784Ratregion
10773D14Mit10260148205747182057735Ratregion
11086D14Mgh1119148068483380684938Ratregion
33965D14Mit15193148361068083610873Ratregion
34345D14Mgh2138147351328073513414Ratregion
34616D14Mit16133148082812980828266Ratregion
36299D14Rat20155148120475181204906Ratregion
36307D14Rat21141149119526891195399Ratregion
37660D14Rat49153149174233591742498Ratregion
37788D14Rat37226147580672875806970Ratregion
36512D14Rat18155147995092179951074Ratregion
34931D14Rat19160148068432080684482Ratregion
35837D14Rat27158147558256875582726Ratregion
38016D14Rat51193148346063583460830Ratregion
38212D14Rat57218147892987778930087Ratregion
38214D14Rat59207147510768375107886Ratregion
40396D14Rat108158148060100280601154Ratregion
40134D14Rat91160147812416678124328Ratregion
40342D14Rat92156147913128779131451Ratregion
38806D14Rat67145148347125583471397Ratregion
39030D14Rat38200149255388692554092Ratregion
39310D14Rat34228149034862590348856Ratregion
41986D14Arb10241147341532373415578Ratregion
43026D14Rat127218147442817974428411Ratregion
43027D14Rat144131147766864177668777Ratregion
42393D14Rat136237148148261181482839Ratregion
42394D14Rat137219148439090184391119Ratregion
40864D14Rat93223148086769580867915Ratregion
41138D14Rat94235148336806283368335Ratregion
45190D14Got66177148728538687285563Ratregion
45191D14Got63193148833061688331125Ratregion
45191D14Got63193148833093288331125Ratregion
45192D14Got67171148813325988133432Ratregion
45194D14Got6594148708200187082095Ratregion
45196D14Got70155147973972379739880Ratregion
45205D14Got87158148337426483374424Ratregion
45206D14Got62200148634847786348674Ratregion
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60071D14Got5994147361846173618555Ratregion
60073D14Got61100147562240075622500Ratregion
60076D14Got79249149202972492029973Ratregion
60078D14Got83217149054282590543039Ratregion
60079D14Got84189149223454292234733Ratregion
62442D14Uia3195148625840386258598Ratregion
62469D1Uia1150147864030978640460Ratregion
66458D14Mco11270147892195778922228Ratregion
66465D14Mco15229148205748682057735Ratregion
629608D14Got69152147973619879736350Ratregion
67232D14Arb19215148385762283857837Ratregion
67234D14Arb21148205751882057712Ratregion
1630949D14Wox28115148082814880828263Ratregion
1632095D14Got123293149023375590234048Ratregion
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1637780D14Wox29215148039133780391552Ratregion
1634127D14Wox16184147547776775477951Ratregion
7206046Xbp190148039405780394147Ratregion
7206268Fgfr3130147699039376990604Ratregion
5035861PMC24996P1147149166654891666686Ratregion
5038632C86258209147427152974271738Ratregion
5036338Hdh141147599484975994990Ratregion
5039280RH127615196147852005478520250Ratregion
5039280RH127615196147852005478520250Ratregion
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5036645AU048701241147758518877585431Ratregion
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5031340PMC145549P1196148093391280934108Ratregion
5025954RH130337181148682814286828323Ratregion
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5026080RH130833210148638199386382203Ratregion
502861333.MMHAP29FRC12.seq191147725353677253727Ratregion
5028703SHGC-59523113147415911374159226Ratregion
5031456AU048263167149137618791376354Ratregion
5026194RH131279182147567366175673843Ratregion
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5032209AI481085120147383542573835545Ratregion
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5032393AI852688151147995623379956384Ratregion
5032493D5Ertd110e241147427187774272118Ratregion
5032571WI-20033278148016166280161940Ratregion
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5027415AW20875489147881366778813756Ratregion
5027417AW122071156148000071480000870Ratregion
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5030203BF401732135147879950978799644Ratregion
5032881RH136830130148097506180975191Ratregion
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5055937RH144089299147959901779599316Ratregion
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5052239D19343158147908343979083597Ratregion
5052301N28202186147959896379599149Ratregion
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5052373X95591184149167065291670836Ratregion
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5055803RH144011113147888608778886200Ratregion
5053089RH142447165147516287675163041Ratregion
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5058262BI27788097147640283776402934Ratregion
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5502100MARC_4335-4336:996679558:1280148121586481216450Ratregion
5505277BG0743891424148203414482035568Ratregion
5501888MARC_16871-16872:1015445619:10147570866475709293Ratregion
5502517RH125184160147350997473510134Ratregion
5502309RH124401150147715501977155169Ratregion
5502477RH125040122148202820982028331Ratregion
5502581RH125436150147806828378068433Ratregion
Position Markers

Flank 1: (D14Arb10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21473,415,323 - 73,415,578 (+)MAPPER
Rnor_6.01478,172,765 - 78,173,017NCBI
Rnor_5.01478,146,760 - 78,147,012UniSTS
RGSC_v3.41478,978,644 - 78,978,896UniSTS
Celera1472,367,960 - 72,368,212UniSTS
SHRSP x BN Map1443.03RGD
SHRSP x BN Map1443.03UniSTS
Cytogenetic Map14q21UniSTS
Peak: (D14Arb10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21473,415,323 - 73,415,578 (+)MAPPER
Rnor_6.01478,172,765 - 78,173,017NCBI
Rnor_5.01478,146,760 - 78,147,012UniSTS
RGSC_v3.41478,978,644 - 78,978,896UniSTS
Celera1472,367,960 - 72,368,212UniSTS
SHRSP x BN Map1443.03RGD
SHRSP x BN Map1443.03UniSTS
Cytogenetic Map14q21UniSTS
Flank 2: (D14Rat38)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21492,553,886 - 92,554,092 (+)MAPPER
Rnor_6.014102,549,183 - 102,549,388NCBI
Rnor_5.014102,293,972 - 102,294,177UniSTS
RGSC_v3.41499,079,814 - 99,080,020RGD
RGSC_v3.41499,079,815 - 99,080,020UniSTS
RGSC_v3.11499,098,960 - 99,099,165RGD
Celera1491,586,511 - 91,586,716UniSTS
RH 3.4 Map14705.3UniSTS
RH 3.4 Map14705.3RGD
SHRSP x BN Map1463.96UniSTS
SHRSP x BN Map1463.96RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
1582236Gluco22Glucose level QTL 223.30.0164blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143999825175582726Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)146875779683368335Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
4889951Bss92Bone structure and strength QTL 923.9tibia area (VT:1000281)tibia-fibula cortical bone total cross-sectional area (CMO:0001721)148205747195876975Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
1582209Gluco20Glucose level QTL 203.80.0005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)145002321195023211Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
1582201Sffal2Serum free fatty acids level QTL 240.0002blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)149255388695876975Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
631213Bw60Body weight QTL604.51retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)147995092195876975Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
1582197Gluco27Glucose level QTL 273.40.0006blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)147341532392554092Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532395876975Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat
1582255Gluco29Glucose level QTL 293.10.0025blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)147341532392554092Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general rats were on a high sucrose diet (HSD; 70% calories as sucrose) and OGTT was performed after over-night fasting at 120 minutes after the administration of glucose 1580752
qtl_statistics_details specific pairs of variables were compared by one or two way ANOVA with post hoc Tukey's honest significance difference test 1580752