Kidm32 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Kidm32 (Kidney mass QTL 32) Rattus norvegicus

Symbol: Kidm32
Name: Kidney mass QTL 32
RGD ID: 1582208
Previously known as: Kidney weight; Kidney wt
Trait: kidney mass   (VT:0002707)    
Measurement Type: both kidneys wet weight   (CMO:0000085)    
LOD Score: 3.9
P Value: 0.0018
Variance: 14.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2179,201,365 - 23,653,323RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0179,730,263 - 21,491,085RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01711,839,249 - 23,473,342RGDRnor5.0
RGSC_v3.41715,245,341 - 29,604,237RGDRGSC3.4
RGSC_v3.11715,245,341 - 29,607,065RGD
Cross Type: intercross
Strains Crossed: PD/Cub BN/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
kidney mass  (IDA)

Rat Strain
BN/Cub  (IEA)
PD/Cub  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Dynamic genetic architecture of metabolic syndrome attributes in the rat. Seda O, etal., Physiol Genomics. 2005 Apr 14;21(2):243-52. Epub 2005 Feb 22.
Related QTLs

Related QTL Description Reference
Epfw4 maps to same region RGD:1580752
Bw67 maps to same region RGD:1580752
Bw70 maps to same region RGD:1580752
Bw64 maps to same region RGD:1580752
Bw76 maps to same region RGD:1580752
Bw73 maps to same region RGD:1580752
Insul5 maps to same region RGD:1580752


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1359175F12coagulation factor XII1792076839215530Rat
1587838Pfn3profilin 31792175959218122Rat
3708Slc34a1solute carrier family 34 member 11792188769233852Rat
41018001LOC120098038U6 spliceosomal RNA1792358369235942Rat
620003Rgs14regulator of G-protein signaling 141792489829263104Rat
1308965Lman2lectin, mannose-binding 21792692369286923Rat
628624Mxd3Max dimerization protein 31793014309305156Rat
1308082Prelid1PRELI domain containing 11793053499308389Rat
1309112Rab24RAB24, member RAS oncogene family1793083639310568Rat
1307748Nsd1nuclear receptor binding SET domain protein 11793119639426373Rat
2612Fgfr4fibroblast growth factor receptor 41794615419476268Rat
1308068Zfp346zinc finger protein 3461794937899523681Rat
1307009Uimc1ubiquitin interaction motif containing 11795237939592810Rat
2798Hk3hexokinase 31795969509614847Rat
621755Unc5aunc-5 netrin receptor A1796148419670558Rat
41276873LOC120097834uncharacterized LOC1200978341797173879721262Rat
7608842LOC102550792uncharacterized LOC1025507921797822729787085Rat
1311167Tspan17tetraspanin 171798192129826851Rat
1585494Eif4e1beukaryotic translation initiation factor 4E family member 1B1798313389856250Rat
70992Sncbsynuclein, beta1798468029855013Rat
1308762Gprin1G protein-regulated inducer of neurite outgrowth 11798636419876832Rat
1560576Cdhr2cadherin-related family member 21798768539913356Rat
1307212Rnf44ring finger protein 441799199829934376Rat
1306577Faf2Fas associated factor family member 21799472169989474Rat
621353Cltbclathrin, light chain B171000151210019201Rat
1309691Higd2aHIG1 hypoxia inducible domain family, member 2A171002185310022777Rat
1305727Nop16NOP16 nucleolar protein171002295010027867Rat
1303298Arl10ADP-ribosylation factor like GTPase 10171003020910038664Rat
1359256LOC306766hypothetical LOC306766171004914210061819Rat
2319689Simc1SUMO-interacting motifs containing 1171006175210106938Rat
1566033RGD1566033similar to BC003940 protein171012156810121915Rat
1311669Thoc3THO complex subunit 3171014318410152375Rat
40998148LOC120097924uncharacterized LOC120097924171018108010210110Rat
9251698Lnc012long non-coding RNA 012171020480010237980Rat
70945Cplx2complexin 2171021957710292835Rat
2831Hrh2histamine receptor H 2171036835510407791Rat
41294837LOC120097817uncharacterized LOC120097817171044303610449288Rat
6502900Rplp0-ps1ribosomal protein lateral stalk subunit P0, pseudogene 1171046213410463316Rat
11442307LOC10834850960S ribosomal protein L35a pseudogene171047781810478314Rat
1308482Sfxn1sideroflexin 1171048625010522640Rat
40930565LOC120098019U2 spliceosomal RNA171048650010486619Rat
2518Drd1dopamine receptor D1171054044010544971Rat
41166359LOC120098032U4 spliceosomal RNA171073729910737389Rat
7662067LOC102552119uncharacterized LOC102552119171080346010809023Rat
11386207LOC108348510uncharacterized LOC108348510171093153910966537Rat
7597597LOC102552470uncharacterized LOC102552470171101673911018366Rat
40944361LOC120097819uncharacterized LOC120097819171105048111058723Rat
41316127LOC120097868uncharacterized LOC120097868171105891611066506Rat
11404592LOC108348511uncharacterized LOC108348511171107059611085374Rat
3116Msx2msh homeobox 2171109721411102879Rat
11396780LOC108348476spermatogenesis-associated protein 31-like171116291711169296Rat
41378093LOC120097738spermatogenesis-associated protein 31A3-like171136024111363236Rat
7585937LOC102547119spermatogenesis-associated protein 31C2-like171142981911438281Rat
7609640LOC102554142uncharacterized LOC102554142171182708911861334Rat
7700893LOC102554241uncharacterized LOC102554241171186512311877155Rat
1307140Sptlc1serine palmitoyltransferase, long chain base subunit 1171187724911916295Rat
1561671Uqcc1-ps1ubiquinol-cytochrome c reductase complex assembly factor 1, pseudogene 1171193602611936668Rat
1305275Ror2receptor tyrosine kinase-like orphan receptor 2171197283012148152Rat
41372426LOC120097990small nucleolar RNA SNORA17171221618312216312Rat
11492159LOC108353155uncharacterized LOC108353155171223662712279384Rat
620972Nfil3nuclear factor, interleukin 3 regulated171228049912295728Rat
41288467LOC120097877uncharacterized LOC120097877171230628612312966Rat
1306087AuhAU RNA binding methylglutaconyl-CoA hydratase171232952212424896Rat
41233374LOC120097808uncharacterized LOC120097808171250207712504880Rat
11461795LOC108348512uncharacterized LOC108348512171250403312533736Rat
41174187Rps28-ps2ribosomal protein S28, pseudogene 2171253813512582827Rat
3796Sykspleen associated tyrosine kinase171260461512678437Rat
11501598LOC108348513uncharacterized LOC108348513171268618912689484Rat
9299224LOC103694041uncharacterized LOC103694041171272432212729314Rat
1305580Diras2DIRAS family GTPase 2171273004012761511Rat
41235352LOC120098002small nucleolar RNA SNORA17171286885012868949Rat
11492955LOC108348514uncharacterized LOC108348514171287073912876327Rat
41169198LOC120097901uncharacterized LOC120097901171297591612979231Rat
7574542LOC102555869uncharacterized LOC102555869171306004213082861Rat
6498862LOC100910343uncharacterized LOC100910343171311055013133633Rat
41314589LOC120097837uncharacterized LOC120097837171315814913170015Rat
41121784LOC120097809uncharacterized LOC120097809171322849613251893Rat
1311796Gadd45ggrowth arrest and DNA-damage-inducible, gamma171337684213378587Rat
1310554Sema4dsemaphorin 4D171343032413537146Rat
620991Secisbp2SECIS binding protein 2171353851313569573Rat
1562047Cks2CDC28 protein kinase regulatory subunit 2171357061113575770Rat
41338494LOC120097978small nucleolar RNA SNORA2/SNORA34 family171357293913573075Rat
69348Shc3SHC adaptor protein 3171365224713772710Rat
1583843S1pr3sphingosine-1-phosphate receptor 3171378105013794408Rat
7587129LOC102556322uncharacterized LOC102556322171381457213820743Rat
41062017LOC120097822uncharacterized LOC120097822171386107413864947Rat
1594820Nxnl2nucleoredoxin-like 2171403115114035897Rat
1306210Spin1spindlin 1171405568514105366Rat
7610838LOC102556474uncharacterized LOC102556474171411592414122693Rat
40964660LOC120097800thymosin beta-10-like171413565414135897Rat
1594779Atp5mc2-ps5ATP synthase membrane subunit c locus 2, pseudogene 5171424519614245875Rat
7547464LOC102546542uncharacterized LOC102546542171425869914265934Rat
11459529LOC108353141uncharacterized LOC108353141171426706814285443Rat
7647881LOC102549715uncharacterized LOC102549715171428637114290564Rat
41041361LOC120097933uncharacterized LOC120097933171429506114305709Rat
1594767Wbp11-ps4WW domain binding protein 11, pseudogene 4171430358414309651Rat
41180815LOC120097801spermatogenesis-associated protein 31E1-like171431743314324559Rat
1593560LOC689303similar to vitamin A-deficient testicular protein 11-like171433870014423635Rat
1593548LOC689316hypothetical protein LOC689316171435724914421194Rat
1566133Fbxw17F-box and WD-40 domain protein 17171435953314379386Rat
1566043Nutm2fNUT family member 2F171442364614437059Rat
7655438LOC102548031uncharacterized LOC102548031171446404814472628Rat
41279858LOC120097807uncharacterized LOC120097807171447808214481647Rat
7579019LOC102546342uncharacterized LOC102546342171450942014516154Rat
11489292LOC108353122uncharacterized LOC108353122171457522214601220Rat
1592325LOC689437similar to vitamin A-deficient testicular protein 11-like171460136514608162Rat
11455007Trnak-cuu17transfer RNA lysine (anticodon CUU) 17171461041314610485Rat
1592314Gtf2f2-ps1general transcription factor IIF subunit 2, pseudogene 1171461069614614672Rat
1592304LOC689458similar to vitamin A-deficient testicular protein 11-like171462039514628951Rat
41165812LOC120097805uncharacterized LOC120097805171462205114627071Rat
6497608Spata31c2SPATA31 subfamily C member 2171465709614664280Rat
41249018LOC120097804uncharacterized LOC120097804171468443114689912Rat
41030591LOC120097806uncharacterized LOC120097806171470894714739691Rat
41379058LOC120097802igE-binding protein-like171475688314791952Rat
1591101LOC689526hypothetical protein LOC689526171478035614786234Rat
40940609LOC120097917uncharacterized LOC120097917171479397714824723Rat
7733938LOC102549716high mobility group protein B1-like171484535114924605Rat
1591058LOC689569similar to vitamin A-deficient testicular protein 11-like171486848614873837Rat
621022Iars1isoleucyl-tRNA synthetase 1171494091914987277Rat
41074434LOC120097976small nucleolar RNA SNORA24171496187714961996Rat
41003373LOC120098012small nucleolar RNA SNORA84171498507314985205Rat
1309551Nol8nucleolar protein 8171499039415013784Rat
1589530Cenppcentromere protein P171501386915189312Rat
1308171Ognosteoglycin171503206915052626Rat
621818Omdosteomodulin171506021715068441Rat
41399398LOC120097749uncharacterized LOC120097749171506893115069724Rat
1549776Aspnasporin171507991015104369Rat
11498038LOC10834852360S ribosomal protein L7a pseudogene171508826715090514Rat
6495217Rpl6-ps6ribosomal protein L6, pseudogene 6171511115315112082Rat
2320282Ecm2extracellular matrix protein 2171512019415152536Rat
1311271Ippkinositol-pentakisphosphate 2-kinase171519019115235203Rat
2319147LOC100361933ribosomal protein S12-like171524259715243105Rat
735093Bicd2BICD cargo adaptor 2171525977315304889Rat
1311725Fgd3FYVE, RhoGEF and PH domain containing 3171532484815387271Rat
1310933Susd3sushi domain containing 3171540084515417851Rat
1306058Card19caspase recruitment domain family, member 19171543257215445318Rat
3179Ninj1ninjurin 1171545280415461684Rat
1307284Wnk2WNK lysine deficient protein kinase 2171550367215612479Rat
41165672Trnaa-ugc8transfer RNA alanine (anticodon UGC) 8171561598715616059Rat
7574079Kif11-ps1kinesin family member 11, pseudogene 1171566850515673667Rat
1306643Fam120afamily with sequence similarity 120A171568423315774964Rat
7615661LOC102550793uncharacterized LOC102550793171577650115782662Rat
1305228Phf2PHD finger protein 2171578322115851209Rat
7680951LOC102552096uncharacterized LOC102552096171594656815968132Rat
1310884Barx1BARX homeobox 1171599041215993887Rat
1307698Ptpdc1protein tyrosine phosphatase domain containing 1171602896416076512Rat
41118493LOC120097987small nucleolar RNA SNORA17171608215716082288Rat
41063048LOC120097935uncharacterized LOC120097935171610527116116498Rat
2325409Mirlet7a1microRNA let-7a-1171611376616113859Rat
4888607Mirlet7f-1microRNA let7f-1171611413016114226Rat
2325350Mirlet7f-1osmicroRNA let7f-1, opposite strand171611413416114222Rat
2325622Mirlet7dmicroRNA let-7d171611589316115990Rat
4888582Mir3596bmicroRNA 3596b171611589416115988Rat
11486166LOC108348525uncharacterized LOC108348525171612050116139230Rat
1304631Zfp169zinc finger protein 169171613920416167242Rat
631428Id4inhibitor of DNA binding 4171638938716391956Rat
41116927LOC120097866uncharacterized LOC120097866171648131216485779Rat
11394758LOC108348527uncharacterized LOC108348527171649932816539903Rat
7517520LOC102546683uncharacterized LOC102546683171650457716512507Rat
7665766LOC102546543uncharacterized LOC102546543171655822116565695Rat
11458415LOC108348529uncharacterized LOC108348529171671517916738936Rat
11513126LOC108348530uncharacterized LOC108348530171680555716815648Rat
41088446LOC120098023U2 spliceosomal RNA171691301416913182Rat
41196198LOC120097957uncharacterized LOC120097957171730269417306531Rat
41337267LOC120097909uncharacterized LOC120097909171732324317338286Rat
1308856Rnf144bring finger protein 144B171743127117580687Rat
7539610LOC102555870uncharacterized LOC102555870171747659317480276Rat
41228713LOC120097851uncharacterized LOC120097851171756238317563112Rat
41199942LOC120098010small nucleolar RNA U13171756722117567325Rat
1303246DekDEK proto-oncogene171758080417602825Rat
1310701Kdm1blysine demethylase 1B171760296117643865Rat
1585162Tpmtthiopurine S-methyltransferase171764408817662709Rat
1585156Nlrp4el-ps1NLR family, pyrin domain containing 4E like, pseudogene 1171766237517674258Rat
735081Nhlrc1NHL repeat containing E3 ubiquitin protein ligase 1171767437517675565Rat
41108574Nkiras1-ps1NFKB inhibitor interacting Ras-like 1, pseudogene 1171770607117708553Rat
11460312LOC108348531uncharacterized LOC108348531171774517017754615Rat
1307825Kif13akinesin family member 13A171776659717948517Rat
41071758LOC120098057U6 spliceosomal RNA171779365417793761Rat
41376518LOC120098042U6 spliceosomal RNA171793318517933292Rat
41292693LOC120097853uncharacterized LOC120097853171795560517958448Rat
2318699Rpl27-ps4ribosomal protein L27, pseudogene 4171796432517965331Rat
3216Nup153nucleoporin 153171797221718024876Rat
1307845Fam8a1family with sequence similarity 8, member A1171802660118035509Rat
41060467LOC120097854uncharacterized LOC120097854171803563818039319Rat
620310Cap2cyclase associated actin cytoskeleton regulatory protein 2171805423418203453Rat
41042245LOC120097856uncharacterized LOC120097856171806025718061663Rat
41026648LOC120097855uncharacterized LOC120097855171820273618209427Rat
7721817LOC102554989zinc finger protein 120-like171824521818247103Rat
1584029Rbm24RNA binding motif protein 24171827568118288231Rat
40946443LOC120097857uncharacterized LOC120097857171828002018355557Rat
1564013Stmnd1stathmin domain containing 1171839331218420655Rat
41314893LOC120097858uncharacterized LOC120097858171846560018481515Rat
11379150LOC108348532uncharacterized LOC108348532171853856118563808Rat
7623637LOC102554492uncharacterized LOC102554492171869579918734682Rat
3624Atxn1ataxin 1171873749119142360Rat
40936389LOC120097815uncharacterized LOC120097815171894291818949851Rat
41278316LOC120097816uncharacterized LOC120097816171910285819115253Rat
70980Gmprguanosine monophosphate reductase171915182019189626Rat
41288532LOC120098056U6 spliceosomal RNA171921150919211617Rat
1305761Mylipmyosin regulatory light chain interacting protein171928664919308295Rat
7700383LOC102549787uncharacterized LOC102549787171932381619431768Rat
41108695LOC120098037U6 spliceosomal RNA171938554119385647Rat
41032533LOC120097842uncharacterized LOC120097842171956586619579796Rat
41213519LOC120098051U6 spliceosomal RNA171966594119666044Rat
41013042LOC120098043U6 spliceosomal RNA171967016119670266Rat
1590759Dtnbp1dystrobrevin binding protein 1171968521819776668Rat
1591663Jarid2jumonji and AT-rich interaction domain containing 2171977748719957696Rat
40933042LOC120097934uncharacterized LOC120097934171995622019960137Rat
41335497LOC120097859uncharacterized LOC120097859172001479820026288Rat
41068176LOC120097911uncharacterized LOC120097911172007800520086112Rat
41323190LOC120097782uncharacterized LOC120097782172011596920118981Rat
11483241LOC108348536uncharacterized LOC108348536172025514920383065Rat
9163311LOC103694056proteasome maturation protein pseudogene172043174520435233Rat
11465102LOC108348537uncharacterized LOC108348537172045137520460265Rat
1596092LOC690414hypothetical protein LOC690414172055384920563628Rat
7622881LOC102550662uncharacterized LOC102550662172074021520794748Rat
9256189LOC103694054uncharacterized LOC103694054172074715120765166Rat
41243183LOC120097898uncharacterized LOC120097898172080675920815422Rat
7684578LOC102551899uncharacterized LOC102551899172082199820859865Rat
1309677Cd83CD83 molecule172088730920907009Rat
41103460LOC120097831uncharacterized LOC120097831172092314420923960Rat
40964924LOC120097907uncharacterized LOC120097907172093149320940445Rat
1560399Rnf182ring finger protein 182172102611021081760Rat
1596027Slc25a31-ps1solute carrier family 25 member 31, pseudogene 1172112521921126780Rat
1307673Mcur1mitochondrial calcium uniporter regulator 1172114252621159651Rat
41040258LOC120097874uncharacterized LOC120097874172117485221184327Rat
9123009LOC103694070uncharacterized LOC103694070172119817921201275Rat
1561940Ranbp9RAN binding protein 9172122080721303009Rat
41387636LOC120098048U6 spliceosomal RNA172127738321277488Rat
1565934Nol7nucleolar protein 7172130365021307042Rat
1303285Sirt5sirtuin 5172131002821337137Rat
41151729LOC120098011small nucleolar RNA U13172139180521391892Rat
1311507Gfod1glucose-fructose oxidoreductase domain containing 1172140014221504972Rat
40962041LOC120097840eukaryotic translation initiation factor 1-like172150512121516312Rat
7593311LOC102547830uncharacterized LOC102547830172151832221530747Rat
1307661Tbc1d7TBC1 domain family, member 7172153070921548556Rat
1303187Phactr1phosphatase and actin regulator 1172156036422040166Rat
41094232LOC120097810uncharacterized LOC120097810172180470021814935Rat
41115611LOC120097835uncharacterized LOC120097835172223117222259744Rat
1593459Jpt1-ps2Jupiter microtubule associated 1, pseudogene 2172225618122257112Rat
2532Edn1endothelin 1172245492422460812Rat
7743140LOC102548003uncharacterized LOC102548003172253693022542986Rat
727847Hivep1HIVEP zinc finger 1172258501622714517Rat
41322840LOC120097876uncharacterized LOC120097876172269803822701819Rat
11494799LOC108348545uncharacterized LOC108348545172271467622746788Rat
41028282LOC120097739uncharacterized LOC120097739172287609322895115Rat
1305679Adtrpandrogen-dependent TFPI-regulating protein172293001222993834Rat
2324560LOC100362172LRRGT00112-like172296404522985226Rat
7566878Rpl9-ps9ribosomal protein L9, pseudogene 9172299441922995920Rat
41358003LOC120097814uncharacterized LOC120097814172308114423100703Rat
1561506Tmem170btransmembrane protein 170B172313115123169946Rat
7587473LOC102551541uncharacterized LOC102551541172319098523291014Rat
1306276Nedd9neural precursor cell expressed, developmentally down-regulated 9172328979323468026Rat
7509506LOC102548345uncharacterized LOC102548345172335925423405529Rat
1591023Smim13small integral membrane protein 13172349766223515705Rat
41070119LOC120097952uncharacterized LOC120097952172351561123518056Rat
4888554Mir3566microRNA 3566172351605923516167Rat
1308605Elovl2ELOVL fatty acid elongase 2172354452023584855Rat
1564922Sycp2lsynaptonemal complex protein 2-like172358921723645273Rat
1311127Gcm2glial cells missing transcription factor 2172365263723661754Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10484D17Mgh11112171053898510539099Ratregion
11257D17Wox16171914157719141833Ratregion
34276D17Mgh2126171533061315330732Ratregion
34588D17Mco4215171053990410540108Ratregion
36245D17Rat7138171804572718045867Ratregion
37210D17Rat113144172280921822809348Ratregion
35302D17Rat9168172301710123017269Ratregion
35354D17Rat61561799912869991442Ratregion
36910D17Rat8168172178284121783009Ratregion
36980D17Rat51481792368219236964Ratregion
37606D17Rat81239172105593221056179Ratregion
37780D17Rat93206171330887813309080Ratregion
37934D17Rat72229172139491721395159Ratregion
35114D17Rat92131171060836710608498Ratregion
39708D17Rat135200171951181819512021Ratregion
38138D17Rat66208171608644516086645Ratregion
38348D17Rat59170172188150821881669Ratregion
38384D3Rat1152001792421609242380Ratregion
40514D17Rat134140171327115413271296Ratregion
38416D17Rat70200171528186615282062Ratregion
38498D17Rat86249171245103112451284Ratregion
38664D17Rat1012251793483189348531Ratregion
38698D17Rat75268171678642716786706Ratregion
38706D17Rat84138172365318423653323Ratregion
38772D17Rat102220172129303921293263Ratregion
40000D17Rat115220172197526821975515Ratregion
38992D17Rat61221171398677313986994Ratregion
41258D17Rat1091261794466489446788Ratregion
43078D17Rat184247171234533112345554Ratregion
43080D17Rat157206171275609212756301Ratregion
43082D17Rat142207171631690816317111Ratregion
43083D17Rat159213171393147513931681Ratregion
40920D17Rat112221171502195215022177Ratregion
40956D17Rat1072001792013659201562Ratregion
40982D17Rat108110171084318510843291Ratregion
41028D17Rat110136171608546816085604Ratregion
41074D17Rat114113171873510718735222Ratregion
60142D17Got121581793019379302095Ratregion
60146D17Got28139171942032019420459Ratregion
45424D17Got13133171209513512095268Ratregion
45428D17Got15278171422074114221019Ratregion
45429D17Got21224171683815316838377Ratregion
45431D17Got16167171754877917548946Ratregion
45432D17Got18168171647544116475609Ratregion
45433D17Got20257171607149116071747Ratregion
45434D17Got17238171646414616464386Ratregion
45435D17Got22163171685549016855653Ratregion
45436D17Got24192171844564418445836Ratregion
45437D17Got23116171844535118445468Ratregion
45438D17Got25177171861162018611799Ratregion
45439D17Got26204171864372918643933Ratregion
45440D17Got27280171933699719337277Ratregion
45443D17Got29178172066577920665957Ratregion
61301D17Mco10194172308036823080567Ratregion
62457D17Uia3132172240536422405496Ratregion
66511D17Mco1165172339312123393334Ratregion
1632124D17Got205107172293910422939206Ratregion
1627271D17Mco12259171283874212839001Ratregion
1627804D17Got202195171678330616783496Ratregion
1627958D17Wox301792368399236938Ratregion
1629166D17Wox23226171054339110543617Ratregion
1641631D17Got203113171738019917380307Ratregion
1633512D17Got204166171998570619985872Ratregion
1635731D17Got201148171393146213931610Ratregion
1635894D17Got200196171677008316770281Ratregion
1634344D17Wox281795992869599469Ratregion
7192488Idb4271171639114416391760Ratregion
7206288Jarid2224171979727419797498Ratregion
7206418RAN918171234719112348109Ratregion
7206458Ror2950171214691112147861Ratregion
7206508UniSTS:546781115171337793113378527Ratregion
5036023PMC86941P1356171337706413377420Ratregion
5038752RH1273122191798762319876532Ratregion
5038802RH127341216171743161717431835Ratregion
5038954RH127428190171802454918024739Ratregion
5039258RH127603195171747977917479974Ratregion
5036418Mx1170171260987112610041Ratregion
5037177RH91165179171525981815259997Ratregion
5025994RH130497180171766250817662688Ratregion
5034099RH141358212172346770023467912Ratregion
5028743Sncb2111798467519846962Ratregion
5031542AU047986165171944646019446625Ratregion
5034215RH141803211171499060414990815Ratregion
5034229RH141853210171802747218027682Ratregion
5034281RH142048198172131005221310251Ratregion
5026288RH131636190172088733920887529Ratregion
5026296RH131669184171802677918026963Ratregion
5026296RH131669184171802677918026963Ratregion
5031762AU047237205171622485716225066Ratregion
5034580BE119850151172158373921583890Ratregion
5026710RH133238180171748251317482693Ratregion
5029289RH144234280172107915421079434Ratregion
5032333Hrh2496171038501910385515Ratregion
5027024RH1344391851799496879949872Ratregion
5027085D3S3819175171577329015773465Ratregion
5032409C88147113171802471018024823Ratregion
5035372AA818380181171928694819287129Ratregion
5035464AI235989217171189003711890254Ratregion
5034918AI1033752441792894439289687Ratregion
5027461AV225605118171229560412295722Ratregion
5030097BE110258152171000821510008367Ratregion
5030175AI1453812201798546989854918Ratregion
5032901RH136902180172346776523467945Ratregion
5025110BB196053116171518877915188895Ratregion
5025380RH128092209171242445712424666Ratregion
5028151D13Mit156120171380597013806090Ratregion
5028153D13Mit17974171992416819924242Ratregion
5031011BF405975162172082046520820768Ratregion
5025936RH130263195171518905515189250Ratregion
5028551C86281185171337687113377056Ratregion
5031105BF412854171172184880621848976Ratregion
5051889RH94716138171264949612649634Ratregion
5055871RH144051148171639059216390740Ratregion
5056463RH144393145171015295110153096Ratregion
5053757RH142833169171005075610050925Ratregion
5053891RH1429101061799521719952277Ratregion
5056689RH1445232581792860079286265Ratregion
5055739RH143974108172358455723584666Ratregion
5058566BI284209203171110248311102686Ratregion
5058588BE1021231741792152949215468Ratregion
5055965RH144105149172188022021880369Ratregion
5056319RH144310124172346640923466533Ratregion
5058708BE102358159171568323615683395Ratregion
5058762BF387059158171807548218075640Ratregion
5056683RH1445191681792179309218098Ratregion
5056875RH1446311591792799739280132Ratregion
5058118BF3866231501796146979614847Ratregion
5055365RH1437591911793136749313865Ratregion
5055413RH143787259171333604313336302Ratregion
5058978BE102663166171311059913110765Ratregion
5052847RH142308187171110143611101623Ratregion
5058250BI277828155171006148510061640Ratregion
5050096RH133860195171791333017913525Ratregion
5058506BF393074242171283244412832686Ratregion
5053451RH142656168172040296420403132Ratregion
5057588BF392233180171831476218314942Ratregion
5057820BF386213151171903606919036212Ratregion
5050542RH1341161971793056369306100Ratregion
5049842RH133713202171873560918735811Ratregion
5050708RH134212182172045985820460025Ratregion
5050730RH134225213172350140723501620Ratregion
5050742RH134232192171561092315611115Ratregion
5053273RH1425532651798557089855973Ratregion
5040684RH128424198171545299415453192Ratregion
5040896RH128546191171002756010027751Ratregion
5043396RH1300021821793103079310489Ratregion
5044434RH130600194171437705914377253Ratregion
5045322RH131111183171191538711915570Ratregion
5045504RH131216217171530525615305473Ratregion
5043968RH130334197171193606311936419Ratregion
5043968RH130334197171193606311936435Ratregion
5044710RH1307592011795098499510050Ratregion
5048716RH133064210171002190610022116Ratregion
5048760RH133089211171229545212295663Ratregion
5045336RH131119184172115407821154262Ratregion
5047578RH132408192171036620610366398Ratregion
5046156RH1315902001793049329305132Ratregion
5047616RH132430217171760253417602751Ratregion
5048908RH133175218171461194614612161Ratregion
5047808RH132540206172313126323131469Ratregion
5049006RH133232204171436827314368477Ratregion
5049176RH133329180172130407921304340Ratregion
5046686RH131896182171054469310544875Ratregion
5047976RH132637183171611626916116452Ratregion
5048032RH1326692091796224109622619Ratregion
5049408RH133464204171003107110031275Ratregion
5049488RH1335102131799247889925001Ratregion
5047084RH132124193171378131313781506Ratregion
5048178RH132753220171110173011101950Ratregion
5049782RH133678183171551288615513069Ratregion
5047180RH132179218171767685017677068Ratregion
5040474RH1283041841793053509305534Ratregion
5043180RH129878150171977650819776658Ratregion
5039748RH127884180171541664715416827Ratregion
5039846RH127940191172349775123497942Ratregion
5042410RH129418191171276126412761457Ratregion
5040864RH128527183171403115214031335Ratregion
5043480RH130049241171599051915990760Ratregion
5074892RH138279169172197278621972955Ratregion
5073906RH137707171171803103018031201Ratregion
5075462RH138608180171571516515715345Ratregion
5072534RH136905193171276126312761458Ratregion
5076572RH139253214171503243215032646Ratregion
5075276RH138501165171868108918681254Ratregion
5075428RH138588143172350209923502242Ratregion
5074874RH138268179171892296818923147Ratregion
5080608RH141678187172313259523132782Ratregion
5075768RH1387862091799582819958490Ratregion
5078020RH140095220171992607519926293Ratregion
5079848RH141238220171191500511915225Ratregion
5077930RH140042219171001956610019786Ratregion
5078588RH140430159171377968313779842Ratregion
5080032RH141344191171813422218134411Ratregion
5073096RH137235200171260468812604888Ratregion
5073934RH1377231951793323319332526Ratregion
5073970RH137744141171359735313597494Ratregion
5071848RH1353202051792883669288571Ratregion
5073514RH137480209172046132820461537Ratregion
5073788RH137639129171377470713774840Ratregion
5061738BF402796124171533785015337974Ratregion
5063338BF404113182171434661714346799Ratregion
5066654AU048229149171072730310727452Ratregion
5067920AU047457226172265196022652188Ratregion
5068616AU047037210171051659410516637Ratregion
5068840AU046893124171123335511233420Ratregion
5069662AU046352232171607152216071758Ratregion
5069146AU046695101171053089410530990Ratregion
5069238AU046629348172306265923063003Ratregion
5069268AU0466082481798499799850055Ratregion
5060182BF400649206171538662315386830Ratregion
5061940BE112196159171518095515181114Ratregion
5062382BE106621157171022332010223477Ratregion
5062458BF397915247171916593019166177Ratregion
5065632BE109502150171384645513846605Ratregion
5062812AW5346111521799483519948503Ratregion
5064108BE120617206171538285815383064Ratregion
5065880AA964229134171048719810487332Ratregion
5060146BE103912159171110264011102799Ratregion
5063690BE107980170171228092812281098Ratregion
5063836BE120016151171021855410218705Ratregion
5065232AA996831215171567745715677671Ratregion
5062386BE106629151171889628718896438Ratregion
5065618BF41262790171746606717466157Ratregion
5065796BE1098851821796148609615042Ratregion
5060766BE1044902071793112419311448Ratregion
5060810BF389188171171209381012093981Ratregion
5062682BF403835152172313800023138152Ratregion
5065942BE1162232201793146189314838Ratregion
5066074BE116739176171638990916390085Ratregion
5064794BE108513163171185147411851637Ratregion
5061458BE1052171511795064449506595Ratregion
5064798BE108539174171603036416030538Ratregion
5064906BF405276174171514420615144380Ratregion
5066558AU048286117172168746521687582Ratregion
5061546BE105422203171001727210017475Ratregion
5084228AA848828126172150424121504367Ratregion
5086260AI138122204171915192819152132Ratregion
5082553BF416265196171214776212147958Ratregion
5087826Drd1a103171054258010542683Ratregion
5088923AU048850276171928240719282677Ratregion
5088245AU048453165171579194615792111Ratregion
5083341BG374969186171101680811016994Ratregion
5088375AU048532298171774815817748456Ratregion
5090341AU049693148172003291220033060Ratregion
5081571BF414013234171777941417779648Ratregion
5084766AI411450182171930641319306595Ratregion
5088175AU048412215171207497212075187Ratregion
5085427BQ202174158172115823521158393Ratregion
5080726RH141746194171802377218023966Ratregion
5080740RH1417542161793120989312313Ratregion
5080842RH141814181171512108115122214Ratregion
5085605BM384003171171323901713239188Ratregion
5085623Slc34a11641792189919219155Ratregion
5085707BE102659158171003025710030415Ratregion
5089111AU048960205172187533721875538Ratregion
5081420AI502631187171885024018850427Ratregion
5082629BF416449153172144463221444785Ratregion
5082695BF4166601811796387079638888Ratregion
5082711BG373710227171788010117880328Ratregion
5080742RH141755184171748414517484329Ratregion
5084680AI171242111172154816321548274Ratregion
5081178RH142010198171574420215744400Ratregion
5081497BF420045212172033347520333701Ratregion
5083813AA891724230171525994915260179Ratregion
5083831AI230799201172153287921533080Ratregion
5503484CLTB_4592613171001880310019416Ratregion
5503466RGS14_30615881792494579250045Ratregion
5503925Idb41468171639049416391962Ratregion
5503724CPLX2_9184596171022316710223764Ratregion
5505333Barx1965171599077515991740Ratregion
5506238Satt227926172158128621582212Ratregion
5506374UniSTS:479010651171500614015006791Ratregion
5506817G46247231171315345613153687Ratregion
5506879G47094237171442961714429854Ratregion
5507017fj85b10.x1101171380339813803499Ratregion
5507303fc02h02.x1396171583556715835963Ratregion
5500121UniSTS:237015200171337692913377128Ratregion
5500123UniSTS:237019240171229538512295625Ratregion
5500603RH1361832001793176479317847Ratregion
5501087PMC133998P70171639114616391956Ratregion
5501367G06234261171525979415260055Ratregion
5502680F122321792150489215366Ratregion
5506765G45205133172284393722844072Ratregion
Position Markers

Flank 1: (D17Rat107)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2179,201,365 - 9,201,562 (+)MAPPER
Rnor_6.0179,730,263 - 9,730,459RGD
Rnor_5.01711,839,249 - 11,839,443NCBI
RGSC_v3.41715,245,341 - 15,245,534RGD
RGSC_v3.11715,245,341 - 15,245,534RGD
RH 3.4 Map17 UniSTS
RH 3.4 Map17 RGD
RH 2.0 Map17 RGD
SHRSP x BN Map17 RGD
Peak: (D17Rat84)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21723,653,184 - 23,653,323 (+)MAPPER
Rnor_6.01721,490,950 - 21,491,085NCBI
Rnor_5.01723,473,207 - 23,473,342UniSTS
RGSC_v3.41729,604,089 - 29,604,224UniSTS
RGSC_v3.41729,603,712 - 29,604,237RGD
RGSC_v3.11729,606,930 - 29,607,065RGD
Celera1723,324,112 - 23,324,238UniSTS
RH 3.4 Map17280.1RGD
RH 3.4 Map17280.1UniSTS
RH 2.0 Map17199.7RGD
SHRSP x BN Map1717.2899RGD
FHH x ACI Map1722.3299RGD
Cytogenetic Map17p12UniSTS
Flank 2: (D17Rat84)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21723,653,184 - 23,653,323 (+)MAPPER
Rnor_6.01721,490,950 - 21,491,085NCBI
Rnor_5.01723,473,207 - 23,473,342UniSTS
RGSC_v3.41729,604,089 - 29,604,224UniSTS
RGSC_v3.41729,603,712 - 29,604,237RGD
RGSC_v3.11729,606,930 - 29,607,065RGD
Celera1723,324,112 - 23,324,238UniSTS
RH 3.4 Map17280.1RGD
RH 3.4 Map17280.1UniSTS
RH 2.0 Map17199.7RGD
SHRSP x BN Map1717.2899RGD
FHH x ACI Map1722.3299RGD
Cytogenetic Map17p12UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122871563Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17211514921881669Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)17429913021293263Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17429913021293263Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat
1581553Pur14Proteinuria QTL 145.30.0001urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)17797996816317111Rat
2303561Bw91Body weight QTL 912body mass (VT:0001259)body weight (CMO:0000012)17886846253868462Rat
1582199Insul5Insulin level QTL 53.40.0119blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)17920136523653323Rat
1582208Kidm32Kidney mass QTL 323.90.0018kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17920136523653323Rat
1582224Epfw4Epididymal fat weight QTL 43.50.0058epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)17920136523653323Rat
1582225Bw67Body weight QTL 676.20.0001body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582226Bw64Body weight QTL 644.20.0017body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582241Bw70Body weight QTL 704.60.0003body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582245Bw73Body weight QTL 734.60.0004body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582258Bw76Body weight QTL 764.60.0005body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17999128640540197Rat
1549900Iddm20Insulin dependent diabetes mellitus QTL 203.7pancreas integrity trait (VT:0010560)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)171398677321975515Rat
1331720Rf43Renal function QTL 432.881kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)171533061323017269Rat
1331765Hrtrt15Heart rate QTL 154.094heart pumping trait (VT:2000009)heart rate (CMO:0000002)171533061355836425Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
1354659Scl68Serum cholesterol level QTL 683.9blood VLDL cholesterol amount (VT:0005144)blood very low density lipoprotein cholesterol level (CMO:0000648)171578159260781592Rat
7394837Memor18Memory QTL 18exploratory behavior trait (VT:0010471)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)171864018263640182Rat
1354628Stl13Serum triglyceride level QTL 133.8blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)172129303960781592Rat
70157Niddm32Non-insulin dependent diabetes mellitus QTL 324.34blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)172245492450909196Rat
61394Bp8Blood pressure QTL 82.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172308056759555013Rat
7488966Bp370Blood pressure QTL 3700.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318457246843Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172365318468653184Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172365318468653184Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172365318468653184Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172365318468653184Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318468653184Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172365318470974005Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general QTL cluster on chr 17p12-14 incorporates body weight linkages, kidney and epididymal fat pad weights and insulin level linkages after HSD feeding 1580752
qtl_general rats were on a high sucrose diet (HSD; 70% calories as sucrose) for 1 week; while still on sucrose diet, dexamethasone (DEX) was given in drinking water (0.026mg/ml) for 3 days then these animals were killed and the kidneys were weighed 1580752
qtl_statistics_details specific pairs of variables were compared by one or two way ANOVA with post hoc Tukey's honest significance difference test 1580752