Stresp22 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Stresp22 (Stress response QTL 22) Rattus norvegicus

Symbol: Stresp22
Name: Stress response QTL 22
RGD ID: 1578768
Previously known as: Sr14
Trait: thymus mass   (VT:0004954)    
Measurement Type: thymus wet weight   (CMO:0000855)    
LOD Score: 2.8
P Value: Not Available
Variance: Not Available
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21635,288,870 - 80,288,870RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01639,000,021 - 84,000,021RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01638,671,706 - 83,671,706RGDRnor5.0
RGSC_v3.41639,026,337 - 84,026,337RGDRGSC3.4
RGSC_v3.11639,026,413 - 84,026,413RGD
Cross Type: Not Available
Strains Crossed: BN/OrlIcoCrlf WKHA/Bord 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
thymus wet weight  IDA 1549862 RGD 

Experimental Condition
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
physical restraint  IDA 1549862 RGD 

Measurement Method
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
post excision weight measurement  IDA 1549862 RGD 

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
BN/OrlIcoCrlf  IEA 1549862 RGD 
WKHA/Bord  IEA 1549862 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
thymus mass  IDA 1549862 RGD 

Disease Annotations     Click to see Annotation Detail View

Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
thymus mass  (IDA)

Rat Strain
BN/OrlIcoCrlf  (IEA)
WKHA/Bord  (IEA)

References

References - curated
# Reference Title Reference Citation
1. QTL mapping for traits associated with stress neuroendocrine reactivity in rats. Llamas B, etal., Mamm Genome 2005 Jul;16(7):505-15.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2318769LOC100362114hypothetical LOC100362114163537080335372808Rat
41353567LOC120097537endogenous retrovirus group K member 6 Gag polyprotein-like163547976535506350Rat
41203672Pcbp4-ps3poly(rC) binding protein 4, pseudogene 3163559446935595438Rat
1590617Rcn1-ps17reticulocalbin 1, pseudogene 17163559978435607577Rat
41364685Pym1-ps11PYM homolog 1, exon junction complex associated factor, pseudogene 11163564611935646695Rat
41185187LOC120097465uncharacterized LOC120097465163565276835697522Rat
1565331Rcn1-ps15reticulocalbin 1, pseudogene 15163566327435664803Rat
6491257Hprt1-ps1hypoxanthine phosphoribosyltransferase 1, pseudogene 1163584100635841628Rat
41247947LOC120097466uncharacterized LOC120097466163584879635855983Rat
11489697LOC108351592uncharacterized LOC108351592163586018735901217Rat
6494993Ptp4a1-ps3protein tyrosine phosphatase 4A1, pseudogene 3163587531935877346Rat
40971542LOC120097464uncharacterized LOC120097464163593461835946112Rat
1596928LOC678756similar to GTPase activating protein testicular GAP1163595351535983016Rat
41336361Txnl4a-ps6thioredoxin-like 4A, pseudogene 6163598413035984351Rat
41362298Naa11-ps20N(alpha)-acetyltransferase 11, NatA catalytic subunit, pseudogene 20163598438335985085Rat
41396311Rcn1-ps9reticulocalbin 1, pseudogene 9163623890436239854Rat
6486900Pym1-ps3PYM homolog 1, exon junction complex associated factor, pseudogene 3163625509336255686Rat
40961205Pym1-ps12PYM homolog 1, exon junction complex associated factor, pseudogene 12163629928136299876Rat
41285393LOC120097541uncharacterized LOC120097541163630240236307708Rat
41231906Trnav-aac21transfer RNA valine (anticodon AAC) 21163649714136497213Rat
40973435LOC1200976395S ribosomal RNA163657817336578291Rat
6499367LOC100910324uncharacterized LOC100910324163658356636601503Rat
6499950Adam21ADAM metallopeptidase domain 21163662532436627657Rat
41118380LOC120097473uncharacterized LOC120097473163663464836659417Rat
631368Gpm6aglycoprotein m6a163664128236973477Rat
41205149LOC120097655U6 spliceosomal RNA163665309536653200Rat
1589657Pnn-ps1pinin, desmosome associated protein, pseudogene 1163686334336867784Rat
1590843Wdr17WD repeat domain 17163705992337191125Rat
1303065Spata4spermatogenesis associated 4163721380937223169Rat
1565973Asb5ankyrin repeat and SOCS box-containing 5163723786937305207Rat
1588184Spcs3signal peptidase complex subunit 3163730535837310792Rat
40933446LOC120097648U6 spliceosomal RNA163743231037432413Rat
41264711LOC120097553pancreatic progenitor cell differentiation and proliferation factor-like163769834737698581Rat
619800Vegfcvascular endothelial growth factor C163771240837827657Rat
41140865Trnaa-agc85transfer RNA alanine (anticodon AGC) 85163790152437901605Rat
7507107LOC102549910uncharacterized LOC102549910163791900937957322Rat
11416551LOC108348395glutathione S-transferase P pseudogene163793094637932807Rat
2324291Kansl2-ps3KAT8 regulatory NSL complex subunit 2, pseudogene 3163801742638018649Rat
41196543LOC120097600small nucleolar RNA SNORA17163829999438300125Rat
1310562Neil3nei-like DNA glycosylase 3163835930538418528Rat
41399315Uqcrh-ps1ubiquinol-cytochrome c reductase hinge protein, pseudogene 1163848625438491593Rat
1309646Agaaspartylglucosaminidase163850466138516607Rat
41327122LOC120097669U7 small nuclear RNA163854055538540616Rat
1586989Pabpc1-ps1poly(A) binding protein, cytoplasmic 1, pseudogene 1163888665038889188Rat
1585878Kics2-ps1KICSTOR subunit 2, pseudogene 1163888932438893550Rat
41063175LOC120097622small nucleolar RNA SNORA17163914552939145633Rat
41325054LOC120097659U6 spliceosomal RNA163916815439168255Rat
1587354Zmynd8-ps2zinc finger, MYND-type containing 8, pseudogene 2163935163639353314Rat
1560648Park7-ps2Parkinsonism associated deglycase, pseudogene 2163972891039729268Rat
41279863LOC120097491uncharacterized LOC120097491163990142039904916Rat
1585819Hdac1-ps7Histone deacetylase 1, pseudogene 7164025972540299510Rat
9350183LOC103693955mitochondrial import receptor subunit TOM20 homolog pseudogene164062441040624826Rat
11444080LOC108353100peptidyl-prolyl cis-trans isomerase A pseudogene164114352941144012Rat
1306641Tenm3teneurin transmembrane protein 3164125190943978594Rat
41330846LOC120097405uncharacterized LOC120097405164188914641899831Rat
41336930LOC120097590U11 spliceosomal RNA164213117342131306Rat
40960275Mrpl48-ps1mitochondrial ribosomal protein L48, pseudogene 1164252802442536603Rat
40956051LOC120097606small nucleolar RNA SNORA17164323777243237902Rat
7688695LOC102552563uncharacterized LOC102552563164398378543991280Rat
41009377Mif-ps4macrophage migration inhibitory factor, pseudogene 4164405798844058997Rat
1359671DctddCMP deaminase164406695244098654Rat
41383168LOC120097446uncharacterized LOC120097446164416121244164003Rat
1596760Rps15a-ps8ribosomal protein S15a, pseudogene 8164417052644170972Rat
7540575LOC102551022uncharacterized LOC102551022164419602144205176Rat
1559427Wwc2WW and C2 domain containing 2164425837244421815Rat
1305271Cldn22claudin 22164442234544423354Rat
1562043Cldn24claudin 24164442481044425472Rat
1596691Psma5-ps1proteasome 20S subunit alpha 5, pseudogene 1164445830944459536Rat
7594186LOC102551260uncharacterized LOC102551260164449135344497591Rat
1305302Cdkn2aipCDKN2A interacting protein164453614744546216Rat
1307347Ing2inhibitor of growth family, member 2164457359244584180Rat
1587353Ndufaf7-ps1NADH:ubiquinone oxidoreductase complex assembly factor 7, pseudogene 1164461422644615701Rat
1560302Erh-ps2ERH, mRNA splicing and mitosis factor, pseudogene 2164463136644632601Rat
1564132Rwdd4RWD domain containing 4164471469844733090Rat
1309765Trappc11trafficking protein particle complex subunit 11164473316944779324Rat
7580994LOC102551690uncharacterized LOC102551690164480445644810885Rat
41108070LOC120097672small nucleolar RNA SNORA70164481066844810803Rat
708477Stox2storkhead box 2164484817945087238Rat
41167470LOC120097575uncharacterized LOC120097575164487462344880702Rat
9368194LOC103693959uncharacterized LOC103693959164512509845180386Rat
41254278LOC120097577uncharacterized LOC120097577164516053845164100Rat
1311645Enpp6ectonucleotide pyrophosphatase/phosphodiesterase 6164516588345294126Rat
1597769LOC685113similar to prothymosin, alpha (gene sequence 28)164529538245307996Rat
7633194LOC102551895uncharacterized LOC102551895164533044745337282Rat
40949490LOC120097410uncharacterized LOC120097410164533760745339067Rat
1597747Ndufa3-ps1NADH:ubiquinone oxidoreductase subunit A3, pseudogene 1164536942845369682Rat
1304922Irf2interferon regulatory factor 2164543921545550054Rat
7619887LOC102552290uncharacterized LOC102552290164544824545462686Rat
40947202Ube2v1-ps3ubiquitin conjugating enzyme E2 V1, pseudogene 3164551413945514882Rat
40975017LOC120097385uncharacterized LOC120097385164555781545634329Rat
1592034Rpl4-ps3ribosomal protein L4, pseudogene 3164565621045657689Rat
2275Casp3caspase 3164566291045681171Rat
1562119Primpolprimase and DNA directed polymerase164568125245715758Rat
1562566Cenpucentromere protein U164571582145739038Rat
2015Acsl1acyl-CoA synthetase long-chain family member 1164575524645821541Rat
11492380LOC108348397uncharacterized LOC108348397164582156945837350Rat
41085564LOC120097625small nucleolar RNA SNORA26164588255245882683Rat
40948478LOC120097416uncharacterized LOC120097416164588353645886632Rat
41398591LOC120097417uncharacterized LOC120097417164588546545891183Rat
7538198LOC102553008uncharacterized LOC102553008164590194245914770Rat
11366572LOC108353101glyceraldehyde-3-phosphate dehydrogenase pseudogene164593892345943631Rat
41292406LOC120097420uncharacterized LOC120097420164596851945974350Rat
1564073Helthelt bHLH transcription factor164599122745993045Rat
41047665Trnat-agu36transfer RNA threonine (anticodon AGU) 36164600166546001745Rat
620352Slc25a4solute carrier family 25 member 4164607293546076730Rat
1307325Cfap97cilia and flagella associated protein 97164608610446135194Rat
1310150Snx25sorting nexin 25164613455246238471Rat
40946287LOC120097653U6 spliceosomal RNA164616119046161295Rat
1305896Lrp2bpLrp2 binding protein164624155446269221Rat
1565715Ankrd37ankyrin repeat domain 37164626902546271971Rat
1311161Ufsp2UFM1-specific peptidase 2164627201646291080Rat
1564308C16h4orf47similar to human chromosome 4 open reading frame 47164629107546315616Rat
1564538Ccdc110coiled-coil domain containing 110164631574546337050Rat
620427Pdlim3PDZ and LIM domain 3164635246046383680Rat
41168026LOC120097631U6atac minor spliceosomal RNA164640181646401933Rat
1583491Gapdh-ps100Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 100164641375346414771Rat
41260400LOC120097373uncharacterized LOC120097373164642924046438631Rat
620061Sorbs2sorbin and SH3 domain containing 2164643522046748743Rat
41125224LOC120097374uncharacterized LOC120097374164660853746610271Rat
41305805LOC120097598small nucleolar RNA SNORA17164667983146679962Rat
41180056LOC120097435uncharacterized LOC120097435164680461246813785Rat
735171Tlr3toll-like receptor 3164682198046837900Rat
1586153Fam149afamily with sequence similarity 149, member A164685537746914553Rat
708530Cyp4v3cytochrome P450, family 4, subfamily v, polypeptide 3164691792946958735Rat
1589656Tuba1b-ps9tubulin, alpha 1B, pseudogene 9164695173246954254Rat
67382Klkb1kallikrein B1164695863446982054Rat
1309364F11coagulation factor XI164698610747009015Rat
620797Mtnr1amelatonin receptor 1A164714446147163919Rat
621254Fat1FAT atypical cadherin 1164717725347296261Rat
1588596Aldoa-ps1aldolase, fructose-bisphosphate A, pseudogene 1164749076147492204Rat
11411172LOC108348398uncharacterized LOC108348398164763321647650775Rat
1563604Ptrh2-ps1peptidyl-tRNA hydrolase 2, pseudogene 1164787217247872720Rat
7530546LOC102554462uncharacterized LOC102554462164795427547989673Rat
41329707LOC120097644U6 spliceosomal RNA164804191948042025Rat
1589009Edf1-ps4endothelial differentiation-related factor 1, pseudogene 4164848871248489307Rat
1307052Adam34la disintegrin and metalloprotease domain 34-like164853645648542246Rat
1589040Adam34a disintegrin and metallopeptidase domain 34164855738548561744Rat
1589057Calcoco2-ps1calcium binding and coiled-coil domain 2, pseudogene 1164859537948600523Rat
1559501Adam26aa disintegrin and metallopeptidase domain 26A164860099848608314Rat
1559626Atp5hl1ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d-like 1164862836348628892Rat
41257946Ncor1-ps1nuclear receptor co-repressor 1, pseudogene 1164867287348673861Rat
41113289Hmgb1-ps28high-mobility group box 1, pseudogene 28164874559648746342Rat
2319133Zfp42zinc finger protein 42164883646348845443Rat
11444868Rpl23-ps1ribosomal protein L23,pseudogene 1164888529148885721Rat
1587863Snrpc-ps1small nuclear ribonucleoprotein polypeptide C, pseudogene 1164891588248918885Rat
1565382Triml2tripartite motif family-like 2164894483848955453Rat
1593988Baz2a-ps1bromodomain adjacent to zinc finger domain, 2A, pseudogene 1164898277748989498Rat
1305337Triml1tripartite motif family-like 1164899496849005343Rat
41141043LOC120097661U6 spliceosomal RNA164948311249483211Rat
9999338Rps27a-ps15ribosomal protein S27a, pseudogene 15164959036749590926Rat
9999339Rps27a-ps16ribosomal protein S27a, pseudogene 16165003563450036049Rat
41225748LOC120097413uncharacterized LOC120097413165048751250503637Rat
9126708LOC10369396560S ribosomal protein L7 pseudogene165056549150566233Rat
1586634Gemin8-ps7gem (nuclear organelle) associated protein 8, pseudogene 7165058814950588849Rat
7540925LOC102547380uncharacterized LOC102547380165088885450901635Rat
9424972LOC103693967male-enhanced antigen 1 pseudogene165089094750892634Rat
41154096LOC120097486uncharacterized LOC120097486165091103650924771Rat
1585495Frg1FSHD region gene 1165092578350946661Rat
7561344LOC102547443uncharacterized LOC102547443165093531350966211Rat
621568Asah1N-acylsphingosine amidohydrolase 1165096640450997827Rat
620901Pcm1pericentriolar material 1165100831551105261Rat
620169Fgl1fibrinogen-like 1165112065251150907Rat
631381Mtus1microtubule associated scaffold protein 1165120249751347791Rat
9201979LOC103693968uncharacterized LOC103693968165124481851256450Rat
41362756LOC120097427uncharacterized LOC120097427165128400351290733Rat
41002418LOC120097428uncharacterized LOC120097428165129541951301207Rat
1308028Pdgfrlplatelet-derived growth factor receptor-like165134792951407850Rat
41365690Elob-ps1elongin B, pseduogene 1165137549251380114Rat
68387Slc7a2solute carrier family 7 member 2165141747851470784Rat
6495615Adam25a disintegrin and metallopeptidase domain 25165148885251492824Rat
1309066Adam24ADAM metallopeptidase domain 24165157827851584342Rat
1306608Mtmr7myotubularin related protein 7165164122551732212Rat
1560016Vps37aVPS37A subunit of ESCRT-I165173617051775384Rat
1305313Cnot7CCR4-NOT transcription complex, subunit 7165177541651794581Rat
628681Zdhhc2zinc finger DHHC-type palmitoyltransferase 2165180846551878060Rat
1563411Micu3mitochondrial calcium uptake family, member 3165191985952010705Rat
71068Fgf20fibroblast growth factor 20165203085352037612Rat
41067752LOC120097642U6 spliceosomal RNA165208750252087608Rat
1590854Rps3-ps5ribosomal protein S3, pseudogene 5165264188552642629Rat
1564316Msr1macrophage scavenger receptor 1165271777552802890Rat
6489169Gnb1-ps2G protein subunit beta 1, pseudogene 2165278833152790166Rat
41055381LOC120097637U4 spliceosomal RNA165298005752980188Rat
1588595Zfp148-ps1zinc finger protein 148, pseudogene 1165305519853057088Rat
41369722Rpl10a-ps10ribosomal protein L10A, pseudogene 10165313477053135584Rat
2322723Smad2-ps1SMAD family member 2, pseudogene 1165313646653137333Rat
1303318Tusc3tumor suppressor candidate 3165319619553345241Rat
41032360LOC120097620small nucleolar RNA SNORA17165335586353355986Rat
11480995Gapdh-ps27Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 27165339106453392063Rat
1307788Sgczsarcoglycan zeta165366028354740811Rat
11372709LOC108353112uncharacterized LOC108353112165374435553809921Rat
41029514LOC120097547uncharacterized LOC120097547165379065553822441Rat
41022210LOC120097546uncharacterized LOC120097546165383921353840224Rat
41355369LOC120097544uncharacterized LOC120097544165397301253982699Rat
2325533Mir383microRNA 383165404034054040413Rat
2322528Ddx18-ps1DEAD-box helicase 18, pseudogene 1165422270054227080Rat
1590853Eif2s1-ps3eukaryotic translation initiation factor 2 subunit alpha, pseudogene 3165440093254401861Rat
40943334LOC120097630U2 spliceosomal RNA165460551654605717Rat
1585256Vdac1-ps4voltage-dependent anion channel 1, pseudogene 4165511540855116384Rat
11407239LOC108348401uncharacterized LOC108348401165522066155238490Rat
1585243LOC688765hypothetical protein LOC688765165524474455246642Rat
68416Dlc1DLC1 Rho GTPase activating protein165524671655671441Rat
11373421LOC108348402uncharacterized LOC108348402165549336255508311Rat
41131752LOC120097447uncharacterized LOC120097447165555765255566471Rat
41224531LOC120097448uncharacterized LOC120097448165569594055709767Rat
1304810Trmt9btRNA methyltransferase 9B (putative)165574055155792198Rat
7630189Ube2e3-ps2ubiquitin-conjugating enzyme E2E 3, pseudogene 2165579978155800464Rat
2321133Sri-ps1sorcin, pseudogene 1165590642855907035Rat
1565245Hist1h2bc-ps1histone cluster 1, H2bc, pseudogene 1165594090755950046Rat
1562583Lonrf1LON peptidase N-terminal domain and ring finger 1165598457256015156Rat
41335540LOC120097451uncharacterized LOC120097451165608045856083734Rat
1311793Prag1PEAK1 related kinase activating pseudokinase 1165608788556141153Rat
7589768LOC102552468uncharacterized LOC102552468165634883456370705Rat
41253835LOC120097468uncharacterized LOC120097468165637070956374687Rat
41064674LOC120097487uncharacterized LOC120097487165639585856401150Rat
1309001Cldn23claudin 23165641367756415401Rat
6499975LOC100910088prolow-density lipoprotein receptor-related protein 1-like165642214556471368Rat
6500448Tufm-ps1Tu translation elongation factor, mitochondrial, pseudogene 1165643746656439103Rat
41266011LOC120097469uncharacterized LOC120097469165650165556508261Rat
1308812Mfhas1multifunctional ROCO family signaling regulator 1165654546256633649Rat
41219742LOC120097472uncharacterized LOC120097472165666140856710374Rat
1308378Eri1exoribonuclease 1165672410156744228Rat
7553804LOC102553369uncharacterized LOC102553369165677155156787029Rat
7519070LOC102553540uncharacterized LOC102553540165680148556810576Rat
41097846LOC120097474uncharacterized LOC120097474165681295956816099Rat
621600Ppp1r3bprotein phosphatase 1, regulatory subunit 3B165683001156842395Rat
40973434Rpl21-ps23ribosomal protein L21, pseudogene 23165691489556918873Rat
7584717LOC102553697uncharacterized LOC102553697165706374857091262Rat
9216280LOC103693975uncharacterized LOC103693975165710271057115093Rat
1308784Tnkstankyrase165722317457370740Rat
620625Dusp4dual specificity phosphatase 4165737665957398161Rat
41342762LOC120097666U7 small nuclear RNA165740486757404926Rat
41246384LOC120097484uncharacterized LOC120097484165741833657422404Rat
9159214LOC10369397860S ribosomal protein L9-like165742942857430476Rat
6490582Rabif-ps1RAB interacting factor, pseudogene 1165798334257983697Rat
40987971LOC120097587small nucleolar RNA SNORA2/SNORA34 family165800164758001782Rat
1303011Sarafstore-operated calcium entry-associated regulatory factor165801723158035481Rat
1307168Leprotl1leptin receptor overlapping transcript-like 1165804093458053600Rat
1566335Mboat4membrane bound O-acyltransferase domain containing 4165806466458077523Rat
1307549Dctn6dynactin subunit 6165807759558096604Rat
1590852Rps17-ps6ribosomal protein S17, pseudogene 6165813384558134324Rat
40926223LOC120097589small nucleolar RNA SNORA29165815097558151119Rat
2320851LOC100364509ribosomal protein S9-like165815663758157376Rat
41011644LOC120097492uncharacterized LOC120097492165815983258164364Rat
41097190LOC120097647U6 spliceosomal RNA165817347258173578Rat
41008204LOC120097660U6 spliceosomal RNA165820278258202883Rat
1561067RbpmsRNA binding protein, mRNA processing factor165823937058395424Rat
41001752LOC120097493uncharacterized LOC120097493165838435558393888Rat
1310134Gtf2e2general transcription factor IIE subunit 2165839930758449467Rat
6501537Smim18small integral membrane protein 18165843099958439372Rat
41290435LOC120097494uncharacterized LOC120097494165847590258488564Rat
621747Gsrglutathione-disulfide reductase165848220958525256Rat
1306023Ubxn8UBX domain protein 8165853608658557684Rat
3381Ppp2cbprotein phosphatase 2 catalytic subunit beta165855811958579325Rat
1560512Rps25-ps6ribosomal protein S25, pseudogene 6165859778758598207Rat
1311266Tex15testis expressed 15, meiosis and synapsis associated165859899158659005Rat
11430756LOC10834844840S ribosomal protein S15a pseudogene165869288958695507Rat
7659612LOC102554887uncharacterized LOC102554887165872767458732172Rat
1305088Purgpurine-rich element binding protein G165873232758763356Rat
41394062LOC120097495uncharacterized LOC120097495165873819558753345Rat
1564788WrnWRN RecQ like helicase165876351758898604Rat
41245709LOC120097496uncharacterized LOC120097496165876431558781404Rat
1563097RGD1563097similar to ribosomal protein S15a165890777058908201Rat
1596879Atpaf2-ps1ATP synthase mitochondrial F1 complex assembly factor 2, pseudogene 1165912763159128475Rat
41355498LOC120097371uncharacterized LOC120097371165924263459251923Rat
621341Nrg1neuregulin 1165925065860303024Rat
41207158LOC120097372uncharacterized LOC120097372165953674259548468Rat
7578262LOC102555473uncharacterized LOC102555473166032322860348169Rat
41119948LOC120097607U2 spliceosomal RNA166048425560484448Rat
1590851Hsp90ab1-ps4heat shock protein 90 alpha family class B member 1, pseudogene 4166075064860763034Rat
1359164Fut10fucosyltransferase 10166086876160958762Rat
1311297Mak16MAK16 homolog166097269960981250Rat
1310414Tti2TELO2 interacting protein 2166098066560988587Rat
41010522Snord13small nucleolar RNA, C/D box 13166098890960989013Rat
1561238Rnf122ring finger protein 122166100987961027520Rat
1310090Dusp26dual specificity phosphatase 26166104178461049319Rat
41360729LOC120097498uncharacterized LOC120097498166112209861137078Rat
7543674LOC102556287uncharacterized LOC102556287166129291761367615Rat
11415534LOC108348408uncharacterized LOC108348408166200731762021618Rat
41377703LOC120097501uncharacterized LOC120097501166212140562134088Rat
41122791LOC120097502uncharacterized LOC120097502166233163462375374Rat
1592970Rps20-ps8ribosomal protein S20, pseudogene 8166254039662540802Rat
1309245Unc5dunc-5 netrin receptor D166286011963406932Rat
41011289Trnal-aag8transfer RNA leucine (anticodon AAG) 8166292303062923110Rat
40993334LOC120097619U2 spliceosomal RNA166310940863109581Rat
41237509Trnas-aga51transfer RNA serine (anticodon AGA) 51166341721763417297Rat
2322262Nme1-ps2NME/NM23 nucleoside diphosphate kinase 1, pseudogene 2166346481463465284Rat
1590850Rps7-ps14ribosomal protein S7, pseudogene 14166389205763892632Rat
1589654Pcbp2-ps11poly(rC) binding protein 2, pseudogene 11166417346464175276Rat
41172685LOC120093063sperm motility kinase-like166425871764385668Rat
41338602LOC120097503uncharacterized LOC120097503166430384164315218Rat
6494469LOC100911229sperm motility kinase-like166441253364424489Rat
1562638Smoksperm motility kinase166445734464469296Rat
11432444LOC108353106uncharacterized LOC108353106166446944364474565Rat
6493806LOC100911264uncharacterized LOC100911264166448862564530093Rat
1359470PotegPOTE ankyrin domain family, member G166448862564530093Rat
1359470PotegPOTE ankyrin domain family, member G166457224664670418Rat
69281Chrna6cholinergic receptor nicotinic alpha 6 subunit166469774164704441Rat
621544Chrnb3cholinergic receptor nicotinic beta 3 subunit166471343864751360Rat
1562020Rpl13a-ps8ribosomal protein L13A, pseudogene 8166476454664765239Rat
6493344LOC100911312uncharacterized LOC100911312166477288064775087Rat
620259Eif4ebp1eukaryotic translation initiation factor 4E binding protein 1166479259564805984Rat
2061Adrb3adrenoceptor beta 3166483982064844552Rat
1307172Got1l1glutamic-oxaloacetic transaminase 1-like 1166486030864873656Rat
1562965Rab11fip1RAB11 family interacting protein 1166488690264917491Rat
1308817Brf2BRF2, RNA polymerase III transcription initiation factor subunit166492833464933057Rat
2323365Adgra2adhesion G protein-coupled receptor A2166493296464971433Rat
41183719LOC120097504uncharacterized LOC120097504166499955265002608Rat
1308962Plpbppyridoxal phosphate binding protein166500329265014886Rat
1309010Erlin2ER lipid raft associated 2166501765465034184Rat
1588249Zfp703zinc finger protein 703166507650765080677Rat
40967231LOC12009739760S ribosomal protein L36-like166510076565101073Rat
11510605LOC108348410uncharacterized LOC108348410166510199465133088Rat
11416552LOC10834840960S ribosomal protein L21 pseudogene166511827865118796Rat
11407470LOC108348411uncharacterized LOC108348411166515616165167893Rat
11474030LOC108348412uncharacterized LOC108348412166520128365225445Rat
41086999LOC120097505uncharacterized LOC120097505166523346465329563Rat
11428828LOC108348413uncharacterized LOC108348413166528696665302218Rat
41085096LOC120097638U4 spliceosomal RNA166550314365503295Rat
7631653LOC102548721uncharacterized LOC102548721166574062765745651Rat
41184862LOC120097512uncharacterized LOC120097512166586097665872807Rat
2323691Rps28-ps3ribosomal protein S28, pseudogene 3166588839165888702Rat
1307589Thap1THAP domain containing 1166590534865909942Rat
1590842Rnf170ring finger protein 170166592888665954092Rat
1560960Hook3hook microtubule-tethering protein 3166595429366058812Rat
2625Fntafarnesyltransferase, CAAX box, alpha166606513166083460Rat
1310810Pomkprotein-O-mannose kinase166608556966101360Rat
1560755Hgsnatheparan-alpha-glucosaminide N-acetyltransferase166610523366137444Rat
7563810Timm23-ps5translocase of inner mitochondrial membrane 23, pseudogene 5166613000366132358Rat
1585877Kcnu1potassium calcium-activated channel subfamily U member 1166614169666229493Rat
1305632Ash2lASH2 like histone lysine methyltransferase complex subunit166624220566264064Rat
41019151LOC120097390uncharacterized LOC120097390166624868766260813Rat
3770Starsteroidogenic acute regulatory protein166626709466274368Rat
1304967Lsm1LSM1 homolog, mRNA degradation associated166627734566288852Rat
1560875Bag4BAG cochaperone 4166628867866305893Rat
40975762LOC120097398translation initiation factor IF-2-like166630218666320513Rat
1585818Ddhd2DDHD domain containing 2166631946966349025Rat
41392674LOC120097664U6 spliceosomal RNA166632724866327355Rat
1591734Plpp5phospholipid phosphatase 5166634948366353887Rat
1308980Nsd3nuclear receptor binding SET domain protein 3166635403066466202Rat
40986082LOC120097673small nucleolar RNA SNORA70166643716066437288Rat
1311220Letm2leucine zipper and EF-hand containing transmembrane protein 2166646495866489640Rat
620713Fgfr1Fibroblast growth factor receptor 1166649244566546731Rat
41035044LOC120097583small nucleolar RNA SNORA15166650282466502950Rat
41069881LOC120097430uncharacterized LOC120097430166655817666561902Rat
41207977LOC120097442uncharacterized LOC120097442166661466766616009Rat
2322704H2az1-ps1H2A.Z variant histone 1, pseudogene 1166665427266655163Rat
2302583Rps28-ps1ribosomal protein S28, pseudogene 1166680835766808682Rat
1303120Tacc1transforming, acidic coiled-coil containing protein 1166681223266895736Rat
1586710Plekha2pleckstrin homology domain containing A2166693868467000661Rat
1306242Htra4HtrA serine peptidase 4166700160567015074Rat
1306769Tm2d2TM2 domain containing 2166701668367022206Rat
621473Adam9ADAM metallopeptidase domain 9166702253867101647Rat
735114Adam32ADAM metallopeptidase domain 32166710238467212163Rat
41287367LOC120097663U6 spliceosomal RNA166711428967114391Rat
621471Adam5ADAM metallopeptidase domain 5166722309567298733Rat
621469Adam3aADAM metallopeptidase domain 3A166729994967349970Rat
41067128LOC120097614small nucleolar RNA SNORA17166734631367346437Rat
620405Adam18ADAM metallopeptidase domain 18166735236067425820Rat
619989Ido1indoleamine 2,3-dioxygenase 1166743068467442459Rat
11465003LOC108348416uncharacterized LOC108348416166744016967444187Rat
1596771Ido2indoleamine 2,3-dioxygenase 2166745915867498052Rat
9108348LOC103693990uncharacterized LOC103693990166755545167556575Rat
6499724Tcimtranscriptional and immune response regulator166759576267597055Rat
40962456LOC120097515uncharacterized LOC120097515166763149467653824Rat
11472134LOC108348419uncharacterized LOC108348419166768602867699808Rat
41168057LOC120097597small nucleolar RNA SNORA48166788064467880796Rat
7706072LOC102553995uncharacterized LOC102553995166789160867895198Rat
41330854LOC120097517uncharacterized LOC120097517166790394667907039Rat
1584398Zmat4zinc finger, matrin type 4166796941068361377Rat
9389461LOC10369399140S ribosomal protein S8 pseudogene166808729068099660Rat
41081055Rps8-ps12ribosomal protein S8, pseudogene 12166809979168100813Rat
41367288LOC120097519uncharacterized LOC120097519166840631668432644Rat
41116796LOC120097520uncharacterized LOC120097520166846704868477524Rat
621074Sfrp1secreted frizzled-related protein 1166857576368613905Rat
41360519LOC120097635U4 spliceosomal RNA166866421968664351Rat
1583286Hnrnpa1-ps35heterogeneous nuclear ribonucleoprotein A1, pseudogene 35166867405568675087Rat
41120881LOC120097609small nucleolar RNA SNORA17166873431868734454Rat
1359725Golga7golgin A7166876725968782536Rat
1307397Gins4GINS complex subunit 4166878757268799938Rat
1310520Gpat4glycerol-3-phosphate acyltransferase 4166881903168852903Rat
1597780Nkx6-3NK6 homeobox 3166886840468873617Rat
1309620Ank1ankyrin 1166887629469054812Rat
41128358LOC120097525uncharacterized LOC120097525166894646768948885Rat
1304892Kat6alysine acetyltransferase 6A166908491469165923Rat
41312810LOC120097527uncharacterized LOC120097527166913914269162178Rat
41149989LOC120097399dynein assembly factor 3, axonemal homolog166916336069217498Rat
41288370LOC120097528uncharacterized LOC120097528166916615169202680Rat
41325543LOC120097529uncharacterized LOC120097529166918849069205200Rat
70969Ap3m2adaptor related protein complex 3 subunit mu 2166921752669237372Rat
3342Platplasminogen activator, tissue type166924058269265177Rat
11448278LOC108348292glyceraldehyde-3-phosphate dehydrogenase pseudogene166928587169287728Rat
621375Ikbkbinhibitor of nuclear factor kappa B kinase subunit beta166931948769373251Rat
3363PolbDNA polymerase beta166937943869402710Rat
1563172Dkk4dickkopf WNT signaling pathway inhibitor 4166940298969406580Rat
7690544LOC102550986serine/arginine repetitive matrix protein 1-like166943284969435732Rat
621577Vdac3voltage-dependent anion channel 3166943498269451473Rat
3699Slc20a2solute carrier family 20 member 2166946085069551418Rat
41402600LOC120097400uncharacterized LOC120097400166953261469536391Rat
2318364Smim19small integral membrane protein 19166955147069565450Rat
1307668Mrps31mitochondrial ribosomal protein S31166960134969621609Rat
41312663LOC120097532uncharacterized LOC120097532166962174669627990Rat
1311488Slc25a15solute carrier family 25 member 15166963158169654869Rat
13207460Lnc-hclncRNA derived from hepatocytes166965345869654867Rat
1305825Tpte2transmembrane phosphoinositide 3-phosphatase and tensin homolog 2166965887469756571Rat
7711557Sub1-ps2SUB1 regulator of transcription, pseudogene 2166974132869742039Rat
41324475Trnaa-agc82transfer RNA alanine (anticodon AGC) 82166975226369752335Rat
1306998Thsd1thrombospondin type 1 domain containing 1166977140869804844Rat
1309754Vps36vacuolar protein sorting 36 homolog166981040469834789Rat
1311631Ckap2cytoskeleton associated protein 2166983966869864852Rat
1307419Nek3NIMA-related kinase 3166986702069892477Rat
1593817Nek5NIMA-related kinase 5166989541469938668Rat
1564725Alg11ALG11, alpha-1,2-mannosyltransferase166994054069951617Rat
2180Atp7bATPase copper transporting beta166995228670024404Rat
1559811Ccdc70coiled-coil domain containing 70167003730970042401Rat
41096911LOC120097401putative protein FAM90A8P167004560670056398Rat
41071646LOC120097402putative protein FAM90A7P167006043570069633Rat
40975440LOC120097509putative protein FAM90A8P167007398670081411Rat
41377630LOC120097500putative protein FAM90A8P167008610570093757Rat
2318111Fam90a1family with sequence similarity 90, member A1167009843970106147Rat
41142380LOC120097578putative protein FAM90A8P167011089370118229Rat
1559883Defb13defensin beta 13167012962570131473Rat
41355023LOC120097377beta-defensin 12167013621870138645Rat
1563061Defb15defensin beta 15167014119370143834Rat
41368796LOC120093117sperm-associated antigen 11-like167015206170154406Rat
1564032Defb11defensin beta 11167015614770163029Rat
1563138Defb9defensin beta 9167018077170183554Rat
1562518Defb10defensin beta 10167020265570212707Rat
1566125Defb2defensin beta 2167023194570245784Rat
1563282Defb50defensin beta 50167025418570266484Rat
619943Defb1defensin beta 1167029886270313604Rat
727951Defa5defensin alpha 5167034253070344836Rat
1304852Defa24defensin alpha 24167034955070350582Rat
1561398Defal1defensin alpha-like 1167037151870372353Rat
41289242Defa5-ps2defensin alpha 5, pseudogene 2167039178170392695Rat
11378360Defal1-ps1defensin alpha-like 1, pseudogene 1167039877870398984Rat
1562293Defa6defensin alpha 6167040526870406142Rat
1560529Defa7defensin alpha 7167041927770420046Rat
1566065Defa8defensin alpha 8167043316670434059Rat
41379300Defa5-ps1defensin alpha 5, pseudogene 1167045492270455803Rat
1564555Defa9defensin alpha 9167048181370482803Rat
727857Np4defensin NP-4 precursor167049460770497261Rat
1587187Defa10defensin alpha 10167051424870515024Rat
1587186Defa11defensin alpha 11167053343670535646Rat
1589653RatNP-3bdefensin RatNP-3 precursor167054436470546533Rat
1564782Defb51defensin beta 51167057092970575052Rat
1565394Defb52defensin beta 52167058815070590626Rat
1562959Defb33defensin beta 33167059476270601625Rat
1563630Defb5defensin beta 5167061320070615360Rat
619944Defb4defensin beta 4167065047270653665Rat
1561378Defb14defensin beta 14167066344370668473Rat
628905Spag11asperm associated antigen 11A167068232670684067Rat
2324475Spag11blsperm associated antigen 11b-like167069781070700336Rat
41124527Defb34defensin beta 34167072020070723134Rat
1564879Defb12defensin beta 12167072572270728143Rat
1563816Defb39defensin beta 39167074034770744157Rat
1590228Btf3-ps2basic transcription factor 3, pseudogene 2167075135670751842Rat
1561801Defb38defensin beta 38167075640970759641Rat
1560790Defb37defensin beta 37167078361570796698Rat
1563712Defb40defensin beta 40167082452270827449Rat
2324120LOC100362738M2 pyruvate kinase-like167083857270840735Rat
1359335Xkr5XK related 5167087498370892972Rat
1306405Agpat51-acylglycerol-3-phosphate O-acyltransferase 5167093948070985761Rat
2323116Map1lc3b2microtubule-associated protein 1 light chain 3 beta 2167099389370994586Rat
1560642Mcph1microcephalin 1167102185571224067Rat
621861Angpt2angiopoietin 2167108836471138805Rat
40984573LOC120097621small nucleolar RNA SNORA17167121221771212319Rat
41070910LOC120097611small nucleolar RNA SNORA17167129810471298230Rat
41154183LOC120097543uncharacterized LOC120097543167142305271462255Rat
41291833LOC120097623small nucleolar RNA SNORA17167152906871529192Rat
11367158LOC108348424uncharacterized LOC108348424167182176171886903Rat
11368550LOC108348426uncharacterized LOC108348426167219418872203386Rat
1305103Csmd1CUB and Sushi multiple domains 1167221818973818380Rat
41080127LOC120097408uncharacterized LOC120097408167274265772769166Rat
41145025LOC120097608small nucleolar RNA SNORA17167287036472870488Rat
11403925LOC108353087cyclin-dependent kinase 4 pseudogene167316304673164202Rat
7505881LOC102550761uncharacterized LOC102550761167382990973858522Rat
41320303LOC120097550uncharacterized LOC120097550167400308674012880Rat
40999196LOC120097551uncharacterized LOC120097551167407246474076678Rat
41343898LOC120097552uncharacterized LOC120097552167413797874140817Rat
41323020LOC120097554uncharacterized LOC120097554167423054774233919Rat
7700141LOC102550919uncharacterized LOC102550919167437920774473037Rat
41277817LOC120097613small nucleolar RNA SNORA17167442447974424603Rat
40944475LOC120097555uncharacterized LOC120097555167447306574477583Rat
1590848Riox2-ps2ribosomal oxygenase 2, pseudogene 2167449032074492124Rat
631437Myom2myomesin 2167452014874592658Rat
7709651LOC102551089uncharacterized LOC102551089167452259474524791Rat
1563576Kbtbd11kelch repeat and BTB domain containing 11167461829174638010Rat
7561455LOC102551149uncharacterized LOC102551149167463231574633836Rat
1565043Arhgef10Rho guanine nucleotide exchange factor 10167464714774738784Rat
7550023LOC102557538uncharacterized LOC102557538167465350174661465Rat
1359518Cln8CLN8, transmembrane ER and ERGIC protein167474966274759553Rat
620224Dlgap2DLG associated protein 2167478677175496402Rat
7506633LOC102547542uncharacterized LOC102547542167538077875381069Rat
1559872Erich1glutamate-rich 1167550132275569129Rat
41322537LOC120097556uncharacterized LOC120097556167550567575511076Rat
1559733Tdrptestis development related protein167562404775652635Rat
1359105Fbxo25F-box protein 25167566606275701770Rat
1565675Coprscoordinator of PRMT5 and differentiation stimulator167572126475726375Rat
1311283Champ1chromosome alignment maintaining phosphoprotein 1167573395875744977Rat
1308778Upf3aUPF3A, regulator of nonsense mediated mRNA decay167575744275768478Rat
40943900LOC120097557uncharacterized LOC120097557167576866275775463Rat
1305076Cdc16cell division cycle 16167577302675796586Rat
1584165Cfap97d2CFAP97 domain containing 2167580243475827040Rat
41335051LOC1200975795S ribosomal RNA167581899875819115Rat
41293475LOC120097558uncharacterized LOC120097558167583772775843361Rat
69365Rasa3RAS p21 protein activator 3167585536075969349Rat
1565445LOC290876similar to RIKEN cDNA 1700029H14167597450175987629Rat
11410499LOC108349416small ubiquitin-related modifier 2 pseudogene167604151476042321Rat
61913Gas6growth arrest specific 6167604543076075904Rat
1566042Tmem255btransmembrane protein 255B167607984076108179Rat
619712Grk1G protein-coupled receptor kinase 1167612250176135792Rat
2178Atp4bATPase H+/K+ transporting subunit beta167614415076153063Rat
1560344Tfdp1transcription factor Dp-1167616204076200871Rat
7690836LOC102548465uncharacterized LOC102548465167620126376209340Rat
1306586Tmco3transmembrane and coiled-coil domains 3167621714676254309Rat
1582994Dcun1d2defective in cullin neddylation 1 domain containing 2167625443376281139Rat
1305641Adprhl1ADP-ribosylhydrolase like 1167628319976298614Rat
1305641Adprhl1ADP-ribosylhydrolase like 1167629877776315075Rat
7637486LOC102548530uncharacterized LOC102548530167630377376307949Rat
41391748Map1lc3b-ps1microtubule-associated protein 1 light chain 3 beta, pseudogene 1167631728376319220Rat
7683974LOC102548586uncharacterized LOC102548586167632526976332633Rat
1309210Grtp1growth hormone regulated TBC protein 1167633277776356414Rat
2989Lamp1lysosomal-associated membrane protein 1167635598276380700Rat
1563853Cul4acullin 4A167638529876422316Rat
1307041Pcid2PCI domain containing 2167642324576448712Rat
1308666Prozprotein Z, vitamin K-dependent plasma glycoprotein167645001376463558Rat
61850F10coagulation factor X167646883476488141Rat
11475569LOC10834843140S ribosomal protein S19 pseudogene167646997376471697Rat
628678F7coagulation factor VII167648977976500636Rat
619782Mcf2lMCF.2 cell line derived transforming sequence-like167650713376652893Rat
1308688Atp11aATPase phospholipid transporting 11A167665775276767640Rat
7539061LOC102548949uncharacterized LOC102548949167676768876772070Rat
1305726Tubgcp3tubulin, gamma complex associated protein 3167685185976912499Rat
1597409Spaca7sperm acrosome associated 7167692861176955555Rat
41386858LOC120097560uncharacterized LOC120097560167697231476994674Rat
40999901LOC120097561uncharacterized LOC120097561167699893977000697Rat
9470088LOC103694002uncharacterized LOC103694002167699976277027871Rat
41279904LOC120097564uncharacterized LOC120097564167706999177079198Rat
41356486LOC120097565uncharacterized LOC120097565167709266577098467Rat
7704535LOC102553495uncharacterized LOC102553495167710001077214392Rat
6487636Sox1SRY-box transcription factor 1167713479577139628Rat
41234042LOC120097566uncharacterized LOC120097566167714789477148983Rat
41154078LOC120097567uncharacterized LOC120097567167747734077523136Rat
1565377Tex29testis expressed 29167765047177670896Rat
620624Arhgef7Rho guanine nucleotide exchange factor 7167767102177782593Rat
40985376LOC120097568uncharacterized LOC120097568167784579077866434Rat
1310501Ankrd10ankyrin repeat domain 10167786648977889745Rat
1306330Ing1inhibitor of growth family, member 1167793727677945320Rat
1311612Cars2cysteinyl-tRNA synthetase 2, mitochondrial167794546877987163Rat
1562691NaxdNAD(P)HX dehydratase167798614878004200Rat
7709112LOC102553902uncharacterized LOC102553902167801784378020944Rat
1593487Rab20RAB20, member RAS oncogene family167801933778043529Rat
1308085Col4a2collagen type IV alpha 2 chain167804759178183360Rat
1307148Col4a1collagen type IV alpha 1 chain167818353378294412Rat
41127978LOC120097569uncharacterized LOC120097569167828855978292112Rat
11386046Gapdh-ps18Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 18167832944778330562Rat
41306675LOC120097570uncharacterized LOC120097570167838119778387983Rat
7671145LOC102554055uncharacterized LOC102554055167842906478478247Rat
69316Irs2insulin receptor substrate 2167848824978512482Rat
7635207LOC102554173uncharacterized LOC102554173167851426278538268Rat
7669836LOC102554419uncharacterized LOC102554419167866153878664549Rat
1588775LOC689713LRRGT00175167877140378802027Rat
41276233LOC120097571uncharacterized LOC120097571167880441378833770Rat
7626946LOC102554684uncharacterized LOC102554684167881062078819595Rat
41044966LOC120097458uncharacterized LOC120097458167883387578836006Rat
9316353LOC103694008uncharacterized LOC103694008167885233878855209Rat
40950904LOC120097572uncharacterized LOC120097572167885597778859239Rat
621561Myo16myosin XVI167888440579364445Rat
1561519Tnfsf13bTNF superfamily member 13b167946240679492888Rat
1308317Abhd13abhydrolase domain containing 13167950187979516712Rat
1304639Lig4DNA ligase 4167951839379526956Rat
41180448LOC120097573uncharacterized LOC120097573167957640379588728Rat
1565902Rps23-ps10ribosomal protein S23, pseudogene 10167965110079651518Rat
1559498Nalf1NALCN channel auxiliary factor 1167971357780236424Rat
41140945LOC120097419uncharacterized LOC120097419167978437579786516Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10841D16Wox13118164697584246975959Ratregion
10842D16Mgh5148164697580146975965Ratregion
34007D16Mit3144164423590444236047Ratregion
34066D16Mgh1236164302484243025077Ratregion
34298D9Mgh1112166842058968420707Ratregion
34553D16Mgh6100164586839745868497Ratregion
35553D16Rat16172167122567271225844Ratregion
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5503782UniSTS:471071512166484306764843579Ratregion
5503823MARC_35058-35059:1074713892:4238166626823866268885Ratregion
5507705UniSTS:252200167019762270198235Ratregion
5505044Myst3249166916304369163292Ratregion
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5505101Ptrh2111164787220347872314Ratregion
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5500358GDB:315025270164973914549739415Ratregion
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5502092MARC_31601-31602:1045759847:1371166665458466654955Ratregion
5501968MARC_21337-21338:1023126946:11093165566776655668859Ratregion
5502928Sfrp1781166857809468578875Ratregion
5502817VDAC3177166944462169446245Ratregion
5502437RH124841151167572635075726501Ratregion
Position Markers

Peak: (D16Rat66)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21657,788,803 - 57,788,938 (+)MAPPER
Rnor_6.01661,504,149 - 61,504,283NCBI
Rnor_6.01661,495,760 - 61,495,894NCBI
Rnor_5.01661,167,432 - 61,167,566UniSTS
Rnor_5.01661,175,846 - 61,175,980UniSTS
RGSC_v3.41661,526,270 - 61,526,405RGD
RGSC_v3.41661,526,271 - 61,526,405UniSTS
RGSC_v3.11661,526,346 - 61,526,480RGD
Celera1655,834,692 - 55,834,826UniSTS
RH 3.4 Map16541.6RGD
RH 3.4 Map16541.6UniSTS
RH 2.0 Map16656.1RGD
SHRSP x BN Map1622.66RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)162432551369325513Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)162515279370152793Rat
1298529Arunc1Aerobic running capacity QTL 14exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)163195152060148445Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)163528887080288870Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
631833Sach2Saccharin preference QTL 240.01consumption behavior trait (VT:0002069)calculated saccharin drink intake rate (CMO:0001613)164302484250166018Rat
8694429Bw164Body weight QTL 16450.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)165272646484729064Rat
8694364Abfw7Abdominal fat weight QTL 712.220.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)165272646484729064Rat
7411648Foco22Food consumption QTL 22150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)165272646484729064Rat
631525Pia14Pristane induced arthritis QTL 144.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)165571108783402471Rat
1298527Arunc2Aerobic running capacity QTL 22.9exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)166853271675029966Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general only male progeny used for linkage analysis 1549862
qtl_general BN/OrlIcoCrlf allele is associated with higher thymus weight 1549862