Stresp9 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Stresp9 (Stress response QTL 9) Rattus norvegicus

Symbol: Stresp9
Name: Stress response QTL 9
RGD ID: 1549911
Previously known as: Approach-3; Sr9
Trait: stress-related behavior trait   (VT:0010451)    
Measurement Type: number of approaches toward negative stimulus before onset of defensive burying response   (CMO:0001960)    
LOD Score: 6.13
P Value: 0.0035
Variance: 1.7
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01247,303,551 - 290,094,216RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41225,366,432 - 267,910,886RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.11225,480,980 - 268,121,971RGD
Cross Type: Not Available
Strains Crossed: WKY/NHsd F344/NHsd 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain
F344/NHsd  (IEA)
WKY/NHsd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Lineage is an epigenetic modifier of QTL influencing behavioral coping with stress. Ahmadiyeh N, etal., Behav Genet 2005 Mar;35(2):189-98.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D1Rat145)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01269,901,560 - 269,901,692NCBI
Rnor_5.01269,705,321 - 269,705,453NCBI
Rnor_5.01269,705,321 - 269,705,541NCBI
Rnor_5.01269,901,560 - 269,901,780NCBI
Rnor_5.01269,705,321 - 269,705,542NCBI
Rnor_5.01269,901,560 - 269,901,781NCBI
RGSC_v3.41247,866,323 - 247,866,542UniSTS
RGSC_v3.41247,866,411 - 247,866,542UniSTS
RGSC_v3.41247,866,322 - 247,866,542RGD
RGSC_v3.11247,980,743 - 247,981,217RGD
Celera1237,646,394 - 237,646,509UniSTS
SHRSP x BN Map1135.6499UniSTS
SHRSP x BN Map1135.6499RGD
FHH x ACI Map1128.0699RGD
Cytogenetic Map1q54UniSTS


Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Stresp9  Stress response QTL 9  Sr9    Symbol updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_statistics_details R/qtl and pseudomarker software were used for linkage analysis 1358767