Hrtrt20 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Hrtrt20 (Heart rate QTL 20) Rattus norvegicus

Symbol: Hrtrt20
Name: Heart rate QTL 20
RGD ID: 1359018
Previously known as: Hr20
Trait: heart pumping trait   (VT:2000009)    
Measurement Type: heart rate   (CMO:0000002)    
LOD Score: 3.08
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21185,356,336 - 202,902,618RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01201,358,068 - 221,983,732RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01208,389,496 - 228,799,992RGDRnor5.0
RGSC_v3.41190,114,247 - 208,110,419RGDRGSC3.4
RGSC_v3.11190,264,129 - 203,408,013RGD
Cross Type: recombinantinbred
Strains Crossed: BXH/Ipcv HXB/Ipcv 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
heart disease  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement
heart rate  (IDA)

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BXH/Ipcv  (IEA)
HXB/Ipcv  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Heart rate and blood pressure quantitative trait loci for the airpuff startle reaction. Jaworski RL, etal., Hypertension 2002 Feb;39(2 Pt 2):348-52.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3643Sctsecretin1196382941196383635Rat
2758Gstp1glutathione S-transferase pi 11201337762201340230Rat
2775H19H19 imprinted maternally expressed transcript1197730698197733374Rat
619771Cuzd1CUB and zona pellucida-like domains 11186089422186130536Rat
69332Ifitm2interferon induced transmembrane protein 21196051539196052719Rat
620006Rin1Ras and Rab interactor 11202355729202362731Rat
61954Galgalanin and GMAP prepropeptide1200650439200655302Rat
3262Pcpyruvate carboxylase1201799374201898412Rat
61984Dmbt1deleted in malignant brain tumors 11185617469185696476Rat
69414Glrx3glutaredoxin 31192241707192272012Rat
71015Ap2a2adaptor related protein complex 2 subunit alpha 21196652315196725609Rat
2870Igf2insulin-like growth factor 21197814409197831802Rat
69330Echs1enoyl-CoA hydratase, short chain 11194895036194903863Rat
2827HrasHRas proto-oncogene, GTPase1196290127196299823Rat
3087MgmtO-6-methylguanine-DNA methyltransferase1191710980191937760Rat
61876Prap1proline-rich acidic protein 11194883078194886874Rat
69285Cfl1cofilin 11202796012202801337Rat
69296Slc29a2solute carrier family 29 member 21202327641202335185Rat
2627Fosl1FOS like 1, AP-1 transcription factor subunit1202754549202763057Rat
3751Sptbn2spectrin, beta, non-erythrocytic 21202002970202045343Rat
2013Acadsbacyl-CoA dehydrogenase, short/branched chain1186188939186227796Rat
3123Muc2mucin 2, oligomeric mucus/gel-forming1196796257196831740Rat
3375Ppp1caprotein phosphatase 1 catalytic subunit alpha1201485117201488734Rat
2386Cox8bcytochrome c oxidase, subunit VIIIb1195977183195978643Rat
2396Cpt1acarnitine palmitoyltransferase 1A1200564634200627059Rat
2315Cd81Cd81 molecule1198235861198251660Rat
71051Bet1lBet1 golgi vesicular membrane trafficking protein-like1195930165195935072Rat
3853Thtyrosine hydroxylase1198071500198078832Rat
628826Muc6mucin 6, oligomeric mucus/gel-forming1196726678196764842Rat
628800Smim38small integral membrane protein 381200366561200371976Rat
727837Or6f2olfactory receptor family 6 subfamily F member 21194976929194977864Rat
621503Kcnq1potassium voltage-gated channel subfamily Q member 11198291711198624683Rat
621739Foxi2forkhead box I21190222151190225526Rat
68343Mrpl23mitochondrial ribosomal protein L231197687452197695222Rat
2522Drd4dopamine receptor D41196396366196400824Rat
620932Msx3msh homeobox 31194839041194842209Rat
620542Rbm14RNA binding motif protein 141202076940202105688Rat
621398Rnh1ribonuclease/angiogenin inhibitor 11196269293196281763Rat
628772Shank2SH3 and multiple ankyrin repeat domains 21199146210199590962Rat
620662Banf1BAF nuclear assembly factor 11202672170202674215Rat
628700FaddFas associated via death domain1199743200199745746Rat
62001Muc5acmucin 5AC, oligomeric mucus/gel-forming1196864375196896475Rat
68325Ighmbp2immunoglobulin mu DNA binding protein 21200506641200529293Rat
708478MrgprfMAS related GPR family member F1200464100200473588Rat
621511Ctsdcathepsin D1197527467197539343Rat
61930Sart1spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP1202690472202699136Rat
621719Calycalcyon neuron-specific vesicular protein1194862671194873861Rat
2916Ins2insulin 21197843277197992522Rat
68399Syt8synaptotagmin 81197588126197593598Rat
621724Oatornithine aminotransferase1187347862187367644Rat
628749Yif1aYip1 interacting factor homolog A, membrane trafficking protein1202394923202399125Rat
619839Cttncortactin1199599710199635254Rat
619843Gpr26G protein-coupled receptor 261186766001186805435Rat
628866Npas4neuronal PAS domain protein 41202281260202298681Rat
620771Ptpreprotein tyrosine phosphatase, receptor type, E1190344331190494815Rat
621061Kat5lysine acetyltransferase 51202895751202903178Rat
708549Nlrp6NLR family, pyrin domain containing 61196004854196011615Rat
620671Deaf1DEAF1 transcription factor1196401857196435541Rat
68372Ctbp2C-terminal binding protein 21187782064187918115Rat
68384Ccnd1cyclin D11200089002200098524Rat
621769Dhcr77-dehydrocholesterol reductase1199015081199031055Rat
727892Cdkn1ccyclin-dependent kinase inhibitor 1C1198655394198658097Rat
61944Chkacholine kinase alpha1201076804201125517Rat
69235Htra1HtrA serine peptidase 11185497815185547380Rat
1304930Cnih2cornichon family AMPA receptor auxiliary protein 21202399416202405110Rat
62050Tnni2troponin I2, fast skeletal type1197595012197597554Rat
621127Dpp3dipeptidylpeptidase 31202204683202228501Rat
2382Coro1bcoronin 1B1201442977201448416Rat
1306710Pitpnm1phosphatidylinositol transfer protein, membrane-associated 11201394099201407523Rat
1304836Gatd1glutamine amidotransferase class 1 domain containing 11196504533196512561Rat
1304686Eif1adeukaryotic translation initiation factor 1A domain containing1202674362202679662Rat
1303171Clcf1cardiotrophin-like cytokine factor 11201507763201517607Rat
620126Fgf3fibroblast growth factor 31200001261200005187Rat
621792Actn3actinin alpha 31202159081202175012Rat
735136Tcirg1T-cell immune regulator 1, ATPase H+ transporting V0 subunit A31201127034201138787Rat
3883Tnnt3troponin T3, fast skeletal type1197652535197669736Rat
628612Bles03basophilic leukemia expressed protein BLES031202734555202736809Rat
1302964Tsga10iptestis specific 10 interacting protein1202700576202714668Rat
1304956Ebf3EBF transcription factor 31191996726192114713Rat
621290Cd151CD151 molecule (Raph blood group)1196564744196568753Rat
2062Grk2G protein-coupled receptor kinase 21201581480201601580Rat
620403Ccscopper chaperone for superoxide dismutase1202113792202134931Rat
620800Bnip3BCL2 interacting protein 31193708164193725348Rat
621775Rplp2ribosomal protein lateral stalk subunit P21196546086196548636Rat
620674Taldo1transaldolase 11196493634196503965Rat
2475Cyp2e1cytochrome P450, family 2, subfamily e, polypeptide 11195840330195850728Rat
2193Bc1brain cytoplasmic RNA 11200073610200073763Rat
1306820Edrf1erythroid differentiation regulatory factor 11188441514188478743Rat
727801Nadsyn1NAD synthetase 11198981559199009806Rat
621876Syt12synaptotagmin 121201729307201760192Rat
620504Cdhr5cadherin-related family member 51196373110196381609Rat
1304637Lto1LTO1 maturation factor of ABCE11200074247200080951Rat
1305014C1h10orf88similar to human chromosome 10 open reading frame 881186132360186149932Rat
1306015Pgghgprotein-glucosylgalactosylhydroxylysine glucosidase1196038276196044561Rat
1306083Cabp4calcium binding protein 41201428671201442950Rat
1306133Lsp1lymphocyte-specific protein 11197614585197648414Rat
1304718Ifitm6interferon induced transmembrane protein 61196117033196118382Rat
1305864Stk32cserine/threonine kinase 32C1193900718193981723Rat
1307362BccipBRCA2 and CDKN1A interacting protein1188512544188524957Rat
1305824Tmem134transmembrane protein 1341201419225201424778Rat
1306343Fam18b-ps1family with sequence similarity 18, member B, pseudogene 11200971080200972723Rat
1305043Clrn3clarin 31190319025190334648Rat
1306744Nkx1-2NK1 homeobox 21187388711187391149Rat
1307581Bbs1Bardet-Biedl syndrome 11202184812202204118Rat
1306425Dusp8dual specificity phosphatase 81197167392197184285Rat
1305144Rps6kb2ribosomal protein S6 kinase B21201451265201458096Rat
1307601Ifitm1interferon induced transmembrane protein 11196067163196069169Rat
1307603Gstp3glutathione S-transferase pi 31201355682201358330Rat
1305810Tspan4tetraspanin 41196571307196593842Rat
1304755Phlda2pleckstrin homology-like domain, family A, member 21198696897198699292Rat
1304756Fank1fibronectin type III and ankyrin repeat domains 11188577512188685501Rat
1307159Sf3b2splicing factor 3b, subunit 21202570423202590774Rat
1306732Sigirrsingle Ig and TIR domain containing1196195363196208692Rat
2159Ascl2achaete-scute family bHLH transcription factor 21198148999198151406Rat
738040MrgprdMAS related GPR family member D1200485189200486148Rat
738044MrgprgMAS related GPR family member G1198947617198951517Rat
738045MrgpreMAS related GPR family member E1198963786198969862Rat
1307377Klc2kinesin light chain 21202414555202424787Rat
1307378Scart1scavenger receptor family member expressed on T-cells 11195020750195031807Rat
1308519Pold4DNA polymerase delta 4, accessory subunit1201526591201528406Rat
620127Fgf4fibroblast growth factor 41200023937200027793Rat
1310028Cimap1aciliary microtubule associated protein 1A1195926034195929250Rat
1305391Nap1l4nucleosome assembly protein 1-like 41198709697198746093Rat
1305394Acy3aminoacylase 31201279751201285803Rat
1305989Peli3pellino E3 ubiquitin protein ligase family member 31202230034202242900Rat
1307043Tssc4tumor suppressing subtransferable candidate 41198251986198254810Rat
1307439Lmntd2lamin tail domain containing 21196315112196320880Rat
1306654Bub3BUB3 mitotic checkpoint protein1186330358186340969Rat
620166Fgf19fibroblast growth factor 191200056656200059944Rat
708360Phrf1PHD and ring finger domains 11196333663196366901Rat
2409Dpysl4dihydropyrimidinase-like 41193883039193898916Rat
1304676Tolliptoll interacting protein1196961585196984252Rat
1306300Eef1akmt2EEF1A lysine methyltransferase 21187616156187640937Rat
1333372Or13a23olfactory receptor family 13 subfamily A member 231195517786195518718Rat
1333828Or13a19colfactory receptor family 13 subfamily A member 19C1195334233195335162Rat
1308679Ssh3slingshot protein phosphatase 31201557167201565577Rat
1310203Mrpl21mitochondrial ribosomal protein L211200529416200542568Rat
1311984Unc93b1unc-93 homolog B1, TLR signaling regulator1201167388201178343Rat
1309133Pkp3plakophilin 31196187835196198844Rat
1308399Tmem80transmembrane protein 801196435375196444368Rat
1307280Nkx6-2NK6 homeobox 21194380149194383533Rat
1560565Ano9anoctamin 91196208863196230381Rat
1310396Urosuroporphyrinogen III synthase1188490832188513659Rat
1310404Cd248CD248 molecule1202373676202376240Rat
1333923Or12j4olfactory receptor family 12 subfamily J member 41195362981195363904Rat
1333513Or13a27dolfactory receptor family 13 subfamily A member 27D1195652234195653166Rat
1310985Rhodras homolog family member D1201708699201724405Rat
1308402Osbpl5oxysterol binding protein-like 51198862071198916469Rat
1333199Or12j3olfactory receptor family 12 subfamily J member 31195264681195265604Rat
1333205Or13a25olfactory receptor family 13 subfamily A member 251195730853195731788Rat
1359187Lhppphospholysine phosphohistidine inorganic pyrophosphate phosphatase1187403390187494577Rat
1309156Ankrd13dankyrin repeat domain 13D1201565712201577987Rat
1333083Or13o2-ps1olfactory receptor family 13 subfamily O member 2, pseudogene 11195188443195188890Rat
620579Pacs1phosphofurin acidic cluster sorting protein 11202437503202569473Rat
1309788Tesmintestis expressed metallothionein like protein1200629688200648434Rat
1332644Or13a27bolfactory receptor family 13 subfamily A member 27B1195393485195394417Rat
1559891RGD1559891similar to synaptonemal complex protein 31186108544186111598Rat
1306891Rbm4RNA binding motif protein 41202078442202087506Rat
1333185Or12j2olfactory receptor family 12 subfamily J member 21195209804195210721Rat
1308234Carns1carnosine synthase 11201459061201470019Rat
1309693Tnfrsf26tumor necrosis factor receptor superfamily, member 261198802513198824049Rat
1334051Or12j2bolfactory receptor family 12 subfamily J member 2B1195315038195315949Rat
1310799Fam53bfamily with sequence similarity 53, member B1187500061187591186Rat
1333358Or6b13olfactory receptor family 6 subfamily B member 131195003659195004615Rat
1311779Tpcn2two pore segment channel 21200416538200446252Rat
1311957Mus81MUS81 structure-specific endonuclease subunit1202790295202796008Rat
1310786Ano1anoctamin 11199751439199900099Rat
1333221Or6ae1olfactory receptor family 6 subfamily A member E11194957151194958089Rat
1310747Cars1cysteinyl-tRNA synthetase 11198753689198796016Rat
1309044Pnpla2patatin-like phospholipase domain containing 21196552723196557805Rat
1311490Tbc1d10cTBC1 domain family, member 10C1201476258201484876Rat
1333614Olr301-psolfactory receptor pseudogene 3011195366554195367209Rat
1332754Or13a26colfactory receptor family 13 subfamily A member 26C1195702019195702951Rat
1310965Ikzf5IKAROS family zinc finger 51186169108186188847Rat
1308374Sirt3sirtuin 31195942066195964472Rat
1310912Eps8l2EPS8-like 21196446067196471542Rat
1309009Ppfia1PTPRF interacting protein alpha 11199641277199718371Rat
1311637Kmt5blysine methyltransferase 5B1201000444201049819Rat
1307914Ptdss2phosphatidylserine synthase 21196241439196267632Rat
1333353Or13a26olfactory receptor family 13 subfamily A member 261195779448195780380Rat
1311654Lrrc56leucine rich repeat containing 561196299843196315170Rat
1311454Btbd16BTB domain containing 161185334971185389518Rat
1309419Kdm2alysine demethylase 2A1201612427201682359Rat
1309436Ndufs8NADH:ubiquinone oxidoreductase core subunit S81201140585201144573Rat
1309261Rce1Ras converting CAAX endopeptidase 11201899358201902593Rat
1306168Inpp5ainositol polyphosphate-5-phosphatase A1194190086194380429Rat
1308477Drap1Dr1 associated protein 11202731775202734468Rat
1305236Psmd13proteasome 26S subunit, non-ATPase 131195964617195976895Rat
1310620Trpm5transient receptor potential cation channel, subfamily M, member 51198254956198277824Rat
1308721Tspan32tetraspanin 321198190128198204447Rat
1308181Ctsfcathepsin F1202152777202158525Rat
1309401Cend1cell cycle exit and neuronal differentiation 11196525153196528152Rat
1310955Cpxm2carboxypeptidase X (M14 family), member 21186836797186947222Rat
1306244Rassf7Ras association domain family member 71196319600196323787Rat
1306956Ovol1ovo like transcriptional repressor 11202855261202868858Rat
1307826Slc25a22solute carrier family 25 member 221196528471196536398Rat
1307828Irf7interferon regulatory factor 71196367380196370943Rat
1308241Adgra1adhesion G protein-coupled receptor A11194629744194673254Rat
708356Ppp2r2dprotein phosphatase 2, regulatory subunit B, delta1193665918193700277Rat
1309541B4gat1beta-1,4-glucuronyltransferase 11202343268202345490Rat
1307145Ppp6r3protein phosphatase 6, regulatory subunit 31200693125200807578Rat
1307177Jakmip3janus kinase and microtubule interacting protein 31193753134193881105Rat
1309329Lrp5LDL receptor related protein 51200814247200917581Rat
1309332Mmp21matrix metallopeptidase 211188480186188485855Rat
1309040Nudt8nudix hydrolase 81201293660201295233Rat
1307108Pwwp2bPWWP domain containing 2B1194040395194059979Rat
1309350RGD1309350similar to transthyretin (4L369)1195905763195909159Rat
1309354Ctswcathepsin W1202772395202777021Rat
1333124Or13a18olfactory receptor family 13 subfamily A member 181195492445195493377Rat
1305476Mki67marker of proliferation Ki-671190496319190522983Rat
1333429Olr294-psolfactory receptor pseudogene 2941195229270195230031Rat
1310680Tmem151atransmembrane protein 151A1202387397202392243Rat
1308955Chid1chitinase domain containing 11196594357196629700Rat
1308918Abraxas2abraxas 2, BRISC complex subunit1187647078187672660Rat
1307900Ifitm5interferon induced transmembrane protein 51196045836196052554Rat
1308585Zfp511zinc finger protein 5111194817697194822102Rat
1309597Tubgcp2tubulin, gamma complex associated protein 21194791113194817807Rat
1307473Doc2gdouble C2-like domains, gamma1201295377201299867Rat
1310052B4galnt4beta-1,4-N-acetyl-galactosaminyl transferase 41196171394196182294Rat
1333577Or13a27olfactory receptor family 13 subfamily A member 271195235583195236515Rat
1562283C1h10orf120similar to human chromosome 10 open reading frame 1201185910420185913486Rat
1561432Scgb1c1secretoglobin, family 1C, member 11195922660195925022Rat
628619Aiparyl-hydrocarbon receptor-interacting protein1201407287201419220Rat
628799Cst6cystatin E/M1202655322202657030Rat
1359665mrpl11mitochondrial ribosomal protein L111202264419202267288Rat
1563319Ifitm10interferon induced transmembrane protein 101197507501197524180Rat
1560958Fam24bfamily with sequence similarity 24 member B1186112544186115998Rat
1562011RGD1562011similar to MAS-related G-protein coupled receptor, member G1198937757198938662Rat
1561983Muc5bmucin 5B, oligomeric mucus/gel-forming1196916861196948830Rat
1560911Cracr2bcalcium release activated channel regulator 2B1196558407196563961Rat
1561125Paoxpolyamine oxidase1194903267194928504Rat
1559927Hmx3H6 family homeobox 31186313237186315201Rat
1561845Sprnshadow of prion protein1194944602194948448Rat
1562983Mob2MOB kinase activator 21197092991197149978Rat
1560948Fam24afamily with sequence similarity 24, member A1186119918186122932Rat
1564300Pstkphosphoseryl-tRNA kinase1186157730186168145Rat
1359496Efemp2EGF containing fibulin extracellular matrix protein 21202781692202789784Rat
1334251Or13a27eolfactory receptor family 13 subfamily A member 27E1195639216195640148Rat
1333730Or12j5olfactory receptor family 12 subfamily J member 51195417480195418403Rat
1333778Olr293-psolfactory receptor pseudogene 2931195220868195221101Rat
1359343Rbm4bRNA binding motif protein 4B1202047934202058025Rat
727957Ric8aRIC8 guanine nucleotide exchange factor A1195935162195941469Rat
1559853Syce1synaptonemal complex central element protein 11195852171195863174Rat
1334140Olr296-psolfactory receptor pseudogene 2961195260637195260964Rat
1559601Ptprcapprotein tyrosine phosphatase, receptor type, C-associated protein1201449133201451293Rat
1334099Or13a26bolfactory receptor family 13 subfamily A member 26B1195754003195754938Rat
628715FibpFGF1 intracellular binding protein1202768065202772405Rat
1311057Brms1BRMS1, transcriptional repressor and anoikis regulator1202345766202355028Rat
1311740Dhx32DEAH-box helicase 32 (putative)1188524512188577500Rat
1560591Snx32sorting nexin 321202801090202818731Rat
628881Chst15carbohydrate sulfotransferase 151187028860187107908Rat
1311946RGD1311946similar to RIKEN cDNA 1810055G021200945241200953950Rat
1559981Lrrc27leucine rich repeat containing 271194004967194035087Rat
1311186Fuomfucose mutarotase1194888535194893046Rat
1334329Olr314-psolfactory receptor pseudogene 3141195766783195767129Rat
1334216Or13a18bolfactory receptor family 13 subfamily A member 18B1195581371195582303Rat
1564153Plekha1pleckstrin homology domain containing A11185427982185479157Rat
1333032Or13a18colfactory receptor family 13 subfamily A member 18C1195610776195611708Rat
1359546Aldh3b1aldehyde dehydrogenase 3 family, member B11201145309201162675Rat
1332957Or13a27colfactory receptor family 13 subfamily A member 27C1195454589195455521Rat
1311792Pidd1p53-induced death domain protein 11196536815196542808Rat
1303323Slc22a18solute carrier family 22, member 181198670626198694977Rat
1333302Or13a19bolfactory receptor family 13 subfamily A member 19B1195160617195161546Rat
1559985Cfap46cilia and flagella associated protein 461194403212194482790Rat
1566256Brsk2BR serine/threonine kinase 21197035522197088624Rat
1565431Mapk1ip1mitogen-activated protein kinase 1 interacting protein 11193655319193665813Rat
1566394Adam8ADAM metallopeptidase domain 81194776559194789330Rat
1586688Tnfrsf22tumor necrosis factor receptor superfamily, member 221198840452198860713Rat
1562437Tcerg1ltranscription elongation regulator 1-like1193012937193201860Rat
1565272Rps23-ps4ribosomal protein S23, pseudogene 41187683563187684283Rat
1359247Ndufv1NADH:ubiquinone oxidoreductase core subunit V11201300365201305461Rat
1583652Adam12ADAM metallopeptidase domain 121188686984189014206Rat
1585230Aldh3b3aldehyde dehydrogenase 3 family, member B31201193832201201666Rat
1564991Gal3st3galactose-3-O-sulfotransferase 31202593692202603446Rat
1559948Sec61g-ps3Sec61 translocon subunit gamma, pseudogene 31195892846195913494Rat
1566209Polr2lRNA polymerase II, I and III subunit L1196570051196572060Rat
1584082Gpr152G protein-coupled receptor 1521201435854201438373Rat
1566410Tex36testis expressed 361188390062188404448Rat
1565630Zdhhc24zinc finger, DHHC-type containing 241202175832202181943Rat
1565261Kndc1kinase non-catalytic C-lobe domain containing 11194689962194738353Rat
1562657Ap5b1adaptor related protein complex 5 subunit beta 11202876272202880303Rat
1584144Tbx10T-box transcription factor 101201285729201292676Rat
1584166Aldh3b2aldehyde dehydrogenase 3 family, member B21201250260201264699Rat
1563323Top6blTOP6B like initiator of meiotic double strand breaks1201902564201989945Rat
1565319Ccdc85bcoiled-coil domain containing 85B1202763645202764631Rat
1565366Hmx2H6 family homeobox 21186319110186326771Rat
1563670Cabp2calcium binding protein 21201374649201380469Rat
1593515Catsper1cation channel, sperm associated 11202643009202652059Rat
1586192Cfl1-ps5cofilin 1, pseudogene 51187296660187297219Rat
1585286Lrfn4leucine rich repeat and fibronectin type III domain containing 41201888569201891861Rat
1588883Cdk2ap2cyclin-dependent kinase 2 associated protein 21201391056201393137Rat
1566072Dock1dedicator of cyto-kinesis 11189467143189983777Rat
1588225Nt5c3a-ps15'-nucleotidase, cytosolic IIIA, pseudogene 11194832479194833350Rat
1598059Vmp1-ps1vacuole membrane protein 1, pseudogene 11195863294195875733Rat
1596153Ccdc87coiled-coil domain containing 871202135021202137717Rat
1597421LOC689065hypothetical protein LOC6890651201784009201785916Rat
1592604Krtap5-8keratin associated protein 5-81197446125197446817Rat
1589375Utf1undifferentiated embryonic cell transcription factor 11194740339194741465Rat
1593322Dmbt1l1deleted in malignant brain tumors 1 like 11185949897186084340Rat
1592568Prr33proline rich 331197644903197650774Rat
1595844Ifitm3interferon induced transmembrane protein 31196111026196112135Rat
1597413Slc25a5-ps10solute carrier family 25 member 5, pseudogene 101201788617201799402Rat
1642882Rab1bRAB1B, member RAS oncogene family1202405759202413850Rat
2302685Insyn2ainhibitory synaptic factor 2A1189697856189753194Rat
2311471LOC100302465hypothetical LOC1003024651189059744189293353Rat
2314879Mir483microRNA 4831197818396197818468Rat
2314883Mir675microRNA 6751197732275197732358Rat
2314887Mir210microRNA 2101196326343196326452Rat
2319141Rnaseh2cribonuclease H2, subunit C1202894504202895675Rat
2319938Rad9aRAD9 checkpoint clamp component A1201488511201553582Rat
2318344C1h10orf143similar to human chromosome 10 open reading frame 1431192184440192222676Rat
2322921Nmur1-ps1neuromedin U receptor 1, pseudogene 11188988752188990053Rat
2320863Kctd18-ps1potassium channel tetramerization domain containing 18, pseudogene 11197301146197302301Rat
2321751Zranb1zinc finger RANBP2-type containing 11187725354187780129Rat
2321900Or13a19olfactory receptor family 13 subfamily A member 191195196027195196956Rat
2322689Ncl-ps6nucleolin, pseudogene 61192181207192182026Rat
4888587Mir3574microRNA 35741196326337196326454Rat
2325486Mir202microRNA 2021194754730194754801Rat
2324597Npsneuropeptide S1190077040190080821Rat
6493252LOC100911413deleted in malignant brain tumors 1 protein-like1185724946185900431Rat
6501977LOC100909737uncharacterized LOC1009097371197828893197830951Rat
6497155Mtg1mitochondrial ribosome-associated GTPase 11194931543194944278Rat
7506405LOC102552318actin-like1199035831199062916Rat
7510674Rpl37-ps2ribosomal protein L37, pseudogene 21202821232202849285Rat
7498653LOC102552864uncharacterized LOC1025528641192580494192600465Rat
7536919LOC102552565uncharacterized LOC1025525651191966309191986518Rat
7646072LOC102553731uncharacterized LOC1025537311194746246194748946Rat
7665911LOC102551752uncharacterized LOC1025517521186961903186967497Rat
7622122LOC102552773uncharacterized LOC1025527731188120174188148128Rat
7622947Utp3-ps1UTP3, small subunit processome component, pseudogene 11200799279200800009Rat
7658496LOC102555354uncharacterized LOC1025553541202402316202418240Rat
7589362LOC102552031uncharacterized LOC1025520311187595895187599379Rat
7571422LOC102551929melanoma-associated antigen G1-like1202810079202811086Rat
7597324LOC102554272uncharacterized LOC1025542721202377451202382164Rat
7556971LOC102552971uncharacterized LOC1025529711196232907196236176Rat
7547519F11r-ps1F11 receptor, pseudogene 11202534582202537112Rat
7553817LOC102553541uncharacterized LOC1025535411193731097193739373Rat
7694619LOC102552157uncharacterized LOC1025521571191017034191039381Rat
7684888LOC102551319uncharacterized LOC1025513191194845214194857999Rat
7725240LOC102551963uncharacterized LOC1025519631190441582190458258Rat
7689565LOC102553046uncharacterized LOC1025530461202003101202022459Rat
7669488LOC102548505uncharacterized LOC1025485051197705332197782594Rat
7670186LOC102553043uncharacterized LOC1025530431196325398196329434Rat
7744082LOC102551753uncharacterized LOC1025517531190139001190144141Rat
7749502LOC102552907uncharacterized LOC1025529071188413379188420695Rat
7711326LOC102548568vegetative cell wall protein gp1-like1197830951197834453Rat
9132574LOC103690347uncharacterized LOC1036903471188411066188424673Rat
9181734LOC103691250uncharacterized LOC1036912501188428298188441431Rat
9106200LOC103691274uncharacterized LOC1036912741201553660201556013Rat
9271178LOC103691261sperm flagellar protein 1-like1194769043194776455Rat
9278179Krtap5-1keratin associated protein 5-11197278886197279893Rat
9323695LOC103691272uncharacterized LOC1036912721200803803200807427Rat
9254028Krtap5-2-ps1keratin associated protein 5-2, pseudogene 11197288058197296467Rat
9257184Mrpl42-ps1mitochondrial ribosomal protein L42, pseudogene 11195068326195071518Rat
9425804LOC103691253uncharacterized LOC1036912531187881345187920159Rat
9473660LOC103691276uncharacterized LOC1036912761202350668202358569Rat
9439981LOC103691254ubiquitin-conjugating enzyme E2 L3 pseudogene1189951742189954254Rat
9453410LOC10369126360S ribosomal protein L9 pseudogene1195891303195891917Rat
11366915LOC10834972540S ribosomal protein S9 pseudogene1200908176200917389Rat
11446129LOC108349660uncharacterized LOC1083496601190980953191004779Rat
11454674LOC108349784ATP synthase subunit g, mitochondrial pseudogene1188001281188001656Rat
11455008LOC108349678uncharacterized LOC1083496781200007802200018418Rat
11470190Trnap-agg2transfer RNA proline (anticodon AGG) 21201060155201060231Rat
11364130LOC108349861high mobility group protein B1 pseudogene1188005315188006052Rat
11406967LOC108349665uncharacterized LOC1083496651193747619193751382Rat
11418059LOC108349679uncharacterized LOC1083496791200210221200234295Rat
11423318LOC108349659uncharacterized LOC1083496591191039559191041522Rat
11425556Trnas-gcu2transfer RNA serine (anticodon GCU) 21202342699202342780Rat
11378084LOC108349673uncharacterized LOC1083496731197950020197994765Rat
11401413Rpl35a-ps6ribosomal protein L35A, pseudogene 61201440417201440862Rat
11391312LOC108349862serine/arginine-rich splicing factor 3 pseudogene1195375344195375899Rat
11504246Trnan-guu1transfer RNA asparagine (anticodon GUU) 11200749189200749261Rat
11497536LOC10834967660S ribosomal protein L7a pseudogene1199684456199685258Rat
11497852LOC108348748small EDRK-rich factor 2 pseudogene1196162790196162970Rat
11499736LOC10834852260S ribosomal protein L27 pseudogene1187299584187299998Rat
11491806LOC108349671keratin-associated protein 5-2-like1197240382197241310Rat
41353902Trnaa-agc75transfer RNA alanine (anticodon AGC) 751187277128187277208Rat
41380058LOC120099946uncharacterized LOC1200999461188404479188404948Rat
41111755Rpl7a-ps7ribosomal protein L7a, pseudogene 71201957319201958455Rat
41206132LOC120099942uncharacterized LOC1200999421186614202186617524Rat
41285163LOC120099971aldehyde dehydrogenase family 3 member B31201228414201250204Rat
41115869LOC120100190U6 spliceosomal RNA1196288031196288126Rat
41286380LOC120099968uncharacterized LOC1200999681200250061200268329Rat
41387290LOC120099954uncharacterized LOC1200999541194005130194006623Rat
41260372Krtap5-2keratin associated protein 5-21197266811197267905Rat
41328408Rps27-ps7ribosomal protein S27, pseudogene 71186877655186877923Rat
41093509LOC120099970uncharacterized LOC1200999701200691273200706656Rat
41187783LOC120099963uncharacterized LOC1200999631198355931198361600Rat
41331186Ncl-ps4nucleolin, pseudogene 41192178482192179369Rat
41150368LOC120093064scavenger receptor cysteine-rich domain-containing protein SCART1-like1195080285195136263Rat
41343059LOC120100426small nucleolar RNA SNORA171189941598189941726Rat
41098602LOC120100119U4 spliceosomal RNA1189367680189367843Rat
41265789LOC120100403small nucleolar RNA SNORA481202311159202311295Rat
41100855Mospd3-ps1motile sperm domain containing 3, pseudogene 11186237011186249134Rat
41267992Aldh3b2-ps1aldehyde dehydrogenase 3 family, member B2, pseudogene 11201226907201244192Rat
41345774LOC120099974uncharacterized LOC1200999741201491606201500205Rat
41194153Rnu6-81RNA, U6 small nuclear 811197577435197577542Rat
41370837LOC120097360uncharacterized LOC1200973601196090054196095217Rat
41127609LOC120098072uncharacterized LOC1200980721193366019193373317Rat
41196423Trnav-aac16transfer RNA valine (anticodon AAC) 161198797943198798023Rat
41220009LOC120098066uncharacterized LOC1200980661192488566192490563Rat
41348681LOC120099955uncharacterized LOC1200999551194433583194434401Rat
41399150LOC120099977uncharacterized LOC1200999771202204999202206841Rat
41399316LOC120099949uncharacterized LOC1200999491191146405191161742Rat
41399942Rps10-ps18ribosomal protein S10, pseudogene 181200084281200084735Rat
41071816LOC120099969uncharacterized LOC1200999691200344504200353691Rat
41186776LOC120100418small nucleolar RNA SNORA171186086712186086840Rat
41349421LOC120097364keratin-associated protein 5-2-like1197306627197307614Rat
41081613Snora54small nucleolar RNA, H/ACA box 541198727462198727588Rat
41230723LOC120099950uncharacterized LOC1200999501192233692192242528Rat
41165200LOC120099962uncharacterized LOC1200999621198493894198507093Rat
41199887LOC120099980uncharacterized LOC1200999801202446708202448022Rat
41012033LOC120099944uncharacterized LOC1200999441187432306187435276Rat
41015854LOC120099951uncharacterized LOC1200999511192977453192980548Rat
40974632LOC120099966uncharacterized LOC1200999661200101019200131295Rat
40975851LOC120097361uncharacterized LOC1200973611196153056196157337Rat
41341459LOC120099959uncharacterized LOC1200999591198077644198123085Rat
40954764LOC120099978uncharacterized LOC1200999781202209395202211763Rat
40979906LOC120100145U6 spliceosomal RNA1189412198189412304Rat
40931209Psma3-ps1proteasome 20S subunit alpha 3, pseudogene 11202067660202078518Rat
40983107Rnu6-1205RNA, U6 small nuclear 12051196216573196216678Rat
40988177LOC12009995760S ribosomal protein L36-like1194805628194806244Rat
40939769LOC120099947uncharacterized LOC1200999471188500120188503814Rat
41074861LOC120099952uncharacterized LOC1200999521192968015192975350Rat
41242081LOC120099961uncharacterized LOC1200999611198441954198492524Rat
41049102LOC120099943uncharacterized LOC1200999431187013396187022780Rat
41077508LOC120099976uncharacterized LOC1200999761202045892202047676Rat
41246513LOC120097362uncharacterized LOC1200973621196635648196645020Rat
41029299LOC120099956uncharacterized LOC1200999561194753901194762856Rat
41079295LOC12009996460S ribosomal protein L21-like1199147655199158744Rat
41319684LOC120098076uncharacterized LOC1200980761194539061194544413Rat
41029618LOC120097363uncharacterized LOC1200973631196704589196707241Rat
41030580Aldh3b3l-ps1aldehyde dehydrogenase 3 family, member B3-like, pseudogene 11201200291201218456Rat
41053370LOC120099979uncharacterized LOC1200999791202424804202438149Rat
41134992LOC120099973uncharacterized LOC1200999731201136555201140708Rat
41136023LOC120099953uncharacterized LOC1200999531193711614193714736Rat
41338033LOC120097365uncharacterized LOC1200973651197546933197550986Rat
41257465LOC120098479scavenger receptor cysteine-rich domain-containing protein SCART1-like1195039124195041676Rat
41222214LOC120099948uncharacterized LOC1200999481189015073189020832Rat
41222380Rnu6-993RNA, U6 small nuclear 9931200728408200728511Rat
41223125LOC120099958uncharacterized LOC1200999581195841002195844138Rat
41303933Snora52small nucleolar RNA, H/ACA box 521196547488196547621Rat
41017423LOC120099945uncharacterized LOC1200999451187480900187493664Rat
41066460LOC120100392small nucleolar RNA SNORA511195788436195788564Rat
41238308LOC120099967uncharacterized LOC1200999671200189261200203943Rat
41069559Rnu6-317RNA, U6 small nuclear 3171196649599196649705Rat
41044945LOC120099960uncharacterized LOC1200999601198173459198179646Rat
41309215LOC120100386small nucleolar RNA SNORA321201660247201660328Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10450D1Smu42401195841852195842092Ratregion
10699D1Wox361451201337534201337679Ratregion
10768D1Wox221301197816378197816499Ratregion
10769D1Arb242591197816307197816572Ratregion
33878D1Mit271951198211513198211706Ratregion
34021D1Mit282121193422268193422481Ratregion
34244D1Mgh101381199050459199050587Ratregion
34326D1Mgh211501192485903192486075Ratregion
34703D1Mgh311341196302015196302141Ratregion
11413D1Smu31011198081083198081184Ratregion
11435D1Arb233001197655883197656196Ratregion
33753D1Mit51651197697768197697933Ratregion
36239D1Rat1111521197260913197261052Ratregion
37294D1Rat1331621192825098192825253Ratregion
35204D1Rat3671601197898742197898893Ratregion
35204D1Rat3671601197933504197933671Ratregion
35535D1Rat1101371185635395185635534Ratregion
37120D1Rat1281121193133375193133485Ratregion
37184D1Rat1882391201277990201278233Ratregion
37732D1Rat2082171191019702191019931Ratregion
36460D1Rat691621194129394194129561Ratregion
36580D1Rat1121411201284552201284693Ratregion
35615D1Rat701521199773958199774075Ratregion
35851D1Rat681561188377360188377506Ratregion
38086D1Rat1441161193630368193630488Ratregion
38222D1Rat2181711196051950196052123Ratregion
40534D1Rat2911671195109528195109710Ratregion
40700D1Rat2902061190292090190292292Ratregion
38570D1Rat2402411193113876193114096Ratregion
38638D1Rat1522271194979407194979626Ratregion
38650D1Rat1652131192731695192731896Ratregion
38738D5Rat1122001192144133192144333Ratregion
39982D1Rat3231411202166582202166723Ratregion
38854D1Rat1682091199368955199369166Ratregion
38940D1Rat1592001193810285193810478Ratregion
38954D1Rat1812161197670404197670618Ratregion
39152D1Rat1472111190409744190409955Ratregion
39462D1Rat2892051191277928191278129Ratregion
42069D1Arb221781193207204193207417Ratregion
42279D1Rat4711381201348517201348657Ratregion
42518D1Rat3642231185538160185538396Ratregion
42519D1Rat3652421188869238188869404Ratregion
42520D1Rat4402051191105768191105985Ratregion
42523D1Rat4422411192656653192656930Ratregion
42524D1Rat3662001197712219197712419Ratregion
41012D1Rat2872111185356336185356530Ratregion
43356D1Got1701801187264526187264706Ratregion
43357D1Got1741651186289342186289505Ratregion
43358D1Got1721451186868901186869046Ratregion
43359D1Got1791581190935481190935636Ratregion
43360D1Got1711461186617022186617166Ratregion
43361D1Got1801561191467440191467594Ratregion
43362D1Got1781211192076289192076410Ratregion
43363D1Got1772521186289266186289503Ratregion
43364D1Got1761381190563262190563399Ratregion
43366D1Got1812471193422198193422445Ratregion
43367D1Got1822671193422214193422481Ratregion
43368D1Got1831671196640856196641023Ratregion
43370D1Wox81071195804352195804487Ratregion
43377D1Wox91131198324342198324465Ratregion
43379D1Got1842151199463338199463553Ratregion
43381D1Got1851441199050488199050632Ratregion
43384D1Got1892641200611501200611765Ratregion
43385D1Got2761161200927006200927122Ratregion
43387D1Got1881151200927008200927123Ratregion
43388D1Got1901731200408630200408806Ratregion
43389D1Got1871671201818238201818406Ratregion
62487D1Uia61371192986983192987116Ratregion
629602D1Hmgc82811197816348197816613Ratregion
66620D1Mco433361194770975194771309Ratregion
67771D1Uwm71061186724110186724220Ratregion
1630682D1Cebr82361194790876194791112Ratregion
1630793D1Cebr11821194391070194391252Ratregion
1631189D1Wox722111200719109200719318Ratregion
1631493D1Wox681941196383444196383638Ratregion
1631665D1Got3361581186931966186932124Ratregion
1631819D1Wox591471200091550200091697Ratregion
1627045D1Mco271731197816331197816504Ratregion
1629179D1Wox741721190292132190292304Ratregion
1638653D1Got3391131192487015192487125Ratregion
1639225D1Got3371141188849265188849381Ratregion
1641445D1Wox581761197816375197816551Ratregion
1632933D1Cebr31211200396561200396680Ratregion
1640080D1Wox421891196301951196302140Ratregion
1634870D1Got3752011186975825186976026Ratregion
1635093D1Got3581841198692683198692867Ratregion
1635610D1Got3701501198874578198874723Ratregion
1635661D1Got3611701197287449197287619Ratregion
1635784D1Wox552041197655456197655660Ratregion
1635984D1Wox631901201075483201075673Ratregion
1637095D1Wox812071199587887199588094Ratregion
1637840D1Wox572141196397155196397369Ratregion
1634103D1Wox761101196111621196111731Ratregion
7205988Sirt31681195954054195955352Ratregion
7206000Ccnd11831200096780200098354Ratregion
7204417H195311197730795197731437Ratregion
7204418Igf25181197817046197817789Ratregion
7192145Cfl11741202800003202800736Ratregion
7192170Nap1l42051198731750198732119Ratregion
7192850H196831197732669197733352Ratregion
7192852H191481197730845197730993Ratregion
7192868Igf23301197817313197817868Ratregion
7192870Igf26071197817230197817837Ratregion
7192874Ins21241197843329197843453Ratregion
7192878Kcnq101198292160198292200Ratregion
7192880Kcnq101198367696198367736Ratregion
7192882Kcnq101198334404198334444Ratregion
7192884Kcnq11441198623523198623667Ratregion
7192155Drd41031196399334196399437Ratregion
7192536D1Mgh221501197816356197816506Ratregion
7192371Ppp1ca511201488292201488343Ratregion
7192481Ins13121197843338197844149Ratregion
7193070AW527407961185461023185461119Ratregion
7206282Ptpre1011190449790190449891Ratregion
7206444Ebf38991191998509191999408Ratregion
7206456Npas45941202283031202283625Ratregion
7206460Slc25a59231201788774201789819Ratregion
5035799PMC18740P14091198072757198073166Ratregion
5035833PMC21231P13011197843360197844160Ratregion
5035835PMC21334P12291197843378197844106Ratregion
5035915PMC307617P11981198655877198656075Ratregion
5038716BB3482871231201729331201729454Ratregion
5038734AW7430722221201526786201527008Ratregion
5036105Cd151901196566618196566827Ratregion
5036111UniSTS:1413112121198655835198656047Ratregion
7206676Tnnt32381197665586197666040Ratregion
5036243D7Wsu87e2511187779055187779306Ratregion
5036332H192001197730795197730995Ratregion
5036386Kcnq1921198376261198377441Ratregion
5036406UniSTS:1438302571198150752198151009Ratregion
5036424Nap1l401198709772198709941Ratregion
5036440Nttp14091197169453197169862Ratregion
5039024RH1274691971187348354187348551Ratregion
5039032RH1274741821196199523196199705Ratregion
5039078RH1275002101189983221189983431Ratregion
5036927AU0496501361200478033200478169Ratregion
5037035AU0499951371200619912200620046Ratregion
5035514EST-CFZ977461021187671389187671491Ratregion
5031268PMC123023P17071197843426197844133Ratregion
5028601AF0649841141200814315200814429Ratregion
5028603AI481912941202158393202158487Ratregion
7206114UniSTS:53213801197816737197817322Ratregion
7206116UniSTS:5321392251197817514197819181Ratregion
7206120UniSTS:5321568081198696960198697768Ratregion
7206130UniSTS:5321681341197731774197731908Ratregion
7206132Cdkn1c01198656232198656943Ratregion
7206178UniSTS:532426641196051833196052448Ratregion
5031404PMC16025P13931202134418202134811Ratregion
5034063RH1412192151202772738202773031Ratregion
5034111RH1414021951190508058190508253Ratregion
5028747RH1421632161202095076202095292Ratregion
5034255RH1419482111194862784194863265Ratregion
5026414RH1321172141194776629194776843Ratregion
5028929RH1428592661196593951196594217Ratregion
5026444RH1322362011190348670190348871Ratregion
5026576RH1327421921197644936197645128Ratregion
5029167RH1437681131187095324187095437Ratregion
5034508BI2801172201200090348200090568Ratregion
5034532BE1191742031201164936201165139Ratregion
5029269RH1441551231193700418193700541Ratregion
5029313RH1443231521194636838194636990Ratregion
5032187RH1263392281202672219202672447Ratregion
5029425Huc11931197744928197745121Ratregion
5029476D1Bda422661196896152196896418Ratregion
5035120BE0962902151202051192202051407Ratregion
5027050RH1345412011200089149200089350Ratregion
5029647BF3865941691194770246194770415Ratregion
5032381AI4295441011186133062186133163Ratregion
5032395AI7874641061195875222195875328Ratregion
5032505D7Ertd753e2461193699674193699920Ratregion
5032505D7Ertd753e2461193699674193699920Ratregion
5035400BM3867581651186166998186167163Ratregion
5032599RH1345991971197507615197507812Ratregion
5027347M84524991191937838191937937Ratregion
5030015AI0726022071187779887187780094Ratregion
5030017BI2797091901196051703196052444Ratregion
5035300AA9555382051202057717202057922Ratregion
5035312AI1447281871194738073194738260Ratregion
5027535AI8371811091202736639202736748Ratregion
5027537AI326383891201709271201709360Ratregion
5030131BE09886701197815641197815797Ratregion
5030143BI2865691521196111162196111314Ratregion
5030159BF3891631231198432655198432778Ratregion
5032959RH1371071821190453992190454174Ratregion
5032987RH1372082081186231206186231414Ratregion
5025040AI267063821189597179189597261Ratregion
5025042AW7424462491197814854197815103Ratregion
5027609AI4152142171196525233196525450Ratregion
5027699WI-152441051201580885201580992Ratregion
5030237BE0992731611202086401202087408Ratregion
5033059RH1374392121202045028202045240Ratregion
5027801RH947943601197815192197815553Ratregion
502789926.MMHAP26FLA5.seq1911193191833193192024Ratregion
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Position Markers

Flank 1: (D1Rat287)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21185,356,336 - 185,356,530 (+)MAPPER
Rnor_6.01201,358,068 - 201,358,261NCBI
Rnor_5.01208,389,496 - 208,389,689UniSTS
RGSC_v3.41190,114,247 - 190,114,441RGD
RGSC_v3.41190,114,248 - 190,114,441UniSTS
RGSC_v3.11190,264,129 - 190,264,322RGD
Celera1182,970,229 - 182,970,422UniSTS
RH 3.4 Map11421.0UniSTS
RH 3.4 Map11421.0RGD
SHRSP x BN Map194.8UniSTS
SHRSP x BN Map194.8RGD
Cytogenetic Map1q37UniSTS
Peak: (D1Rat69)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21194,129,394 - 194,129,561 (+)MAPPER
Rnor_6.01211,670,817 - 211,670,983NCBI
Rnor_5.01218,594,661 - 218,594,827UniSTS
RGSC_v3.41199,112,251 - 199,112,417UniSTS
RGSC_v3.41199,112,250 - 199,112,417RGD
RGSC_v3.11199,262,242 - 199,262,409RGD
Celera1191,811,918 - 191,812,084UniSTS
RH 3.4 Map11437.09RGD
RH 3.4 Map11437.09UniSTS
RH 2.0 Map11056.4RGD
SHRSP x BN Map1101.5099RGD
Flank 2: (D1Rat292)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.11203,407,617 - 203,408,013RGD
SHRSP x BN Map1104.9599UniSTS
SHRSP x BN Map1104.9599RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642722214537671Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1143506580212458660Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144017057197814409Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383635Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1144267353222987745Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1149448574221264292Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1150700142252085212Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1150700247252085048Rat
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354602Bw35Body weight QTL 3512.2body mass (VT:0001259)body weight (CMO:0000012)1151162512201278233Rat
1354620Kidm19Kidney mass QTL 194kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512201278233Rat
1354634Kidm12Kidney mass QTL 123.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)1151162512201278233Rat
1354636Lmblg1Limb length QTL 16.4tibia length (VT:0004357)tibia length (CMO:0000450)1151162512201278233Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1151162766225824951Rat
61343Bp28Blood pressure QTL 28arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1151646613196646613Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
2303622Vencon6Ventilatory control QTL 60.001respiration trait (VT:0001943)respiration rate (CMO:0000289)1154561505199561505Rat
4889428Stresp24Stress response QTL 240.05heart pumping trait (VT:2000009)absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)1155866514200866514Rat
1354618Kidm15Kidney mass QTL 155kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)1156677124201278233Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1156677124218753816Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
61347Bp197Blood pressure QTL 1974.2arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)1158633083203633083Rat
2292222Bp307Blood pressure QTL 3073.060.0014arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164310393213533942Rat
2292220Bp306Blood pressure QTL 3063.470.00087arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164310393243914901Rat
619613Bp77Blood pressure QTL 770.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164747424209747424Rat
619613Bp77Blood pressure QTL 770.01arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1164747424209747424Rat
2312558Glom17Glomerulus QTL 173.90.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1166532971191278129Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1167909849212909849Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1169112897197261052Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1169112897197261052Rat
61341Bp26Blood pressure QTL 26arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1169537671214537671Rat
724562Rends1Renal damage susceptibility QTL 10.05kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)1169537671214537671Rat
1358294Bw37Body weight QTL 3750.000011body mass (VT:0001259)body weight (CMO:0000012)1171310381216310381Rat
2293689Bss47Bone structure and strength QTL 477.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)1171629477216629477Rat
2293693Bss22Bone structure and strength QTL 2233.520.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1171629477216629477Rat
2300161Bmd43Bone mineral density QTL 438.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1171629477216629477Rat
2300174Bmd42Bone mineral density QTL 428.40.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)1171629477216629477Rat
2300187Bmd41Bone mineral density QTL 418.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1171629477216629477Rat
2293654Bss30Bone structure and strength QTL 3032.650.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1171629477216629477Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1171629477216629477Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1171629477216629477Rat
1549830Bss1Bone structure and strength QTL 14.8femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1172609619217609619Rat
631214Bw61Body weight QTL613.40.0001intramuscular adipose amount (VT:0010044)intramuscular fat area (CMO:0001162)1173108781218108781Rat
631670Iddm10Insulin dependent diabetes mellitus QTL 101.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1174133260196383635Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1174133260219133260Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1176426412257976495Rat
1600380Niddm70Non-insulin dependent diabetes mellitus QTL 703.10.0008blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1176550523221550523Rat
10059600Bp378Blood pressure QTL 3783.080.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1176869060221869060Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1177227632256448636Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
1558658Bw59Body weight QTL 593.50.0003body mass (VT:0001259)body weight (CMO:0000012)1178784622223784622Rat
2325725Eae31Experimental allergic encephalomyelitis QTL 31nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1178810256188377506Rat
634321Hc1Hypercalciuria QTL 12.91urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1178810256240830002Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
1302787Stl25Serum triglyceride level QTL 252.70.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1180359209210702199Rat
6903303Scl34Serum cholesterol QTL 342.50.0033blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)1180359209218108781Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1181133855226133855Rat
61378Bp43Blood pressure QTL 4322.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1181746937196383635Rat
724559Pancm1Pancreatic morphology QTL 17.1islet of Langerhans morphology trait (VT:0005215)pancreatic islet damage composite score (CMO:0001156)1181759564214537555Rat
2293083Iddm25Insulin dependent diabetes mellitus QTL 254.18blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1181829673224569684Rat
634312Bp143Blood pressure QTL 14330.0002arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1182623426219932796Rat
8655655Arrd2Age-related retinal degeneration QTL 27.79retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1183970203243914901Rat
8655855Arrd3Age-related retinal degeneration QTL 33.07lens clarity trait (VT:0001304)cataract incidence/prevalence measurement (CMO:0001585)1183970203243914901Rat
631838Niddm36Non-insulin dependent diabetes mellitus QTL 360.01insulin secretion trait (VT:0003564)calculated pancreatic islet insulin release measurement (CMO:0001217)1184550676229550676Rat
1300145Rf7Renal function QTL 72.96urine creatinine amount (VT:0010540)urine creatinine level (CMO:0000125)1185145134221264292Rat
1359018Hrtrt20Heart rate QTL 203.08heart pumping trait (VT:2000009)heart rate (CMO:0000002)1185356336202902618Rat
2312564Glom18Glomerulus QTL 182.40.003kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1185356336231689108Rat
1582206Kidm33Kidney mass QTL 336.9kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1188377360224054420Rat
6480780Insul18Insulin level QTL 184.11blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1189607473200611765Rat
1358898Bp255Blood pressure QTL 2553.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1191019702246062233Rat
10059590Kidm44Kidney mass QTL 443.420.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1191033875236033875Rat
631260Tcas2Tongue tumor susceptibility QTL 24.93tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)1192485903199050587Rat
1358191Ept10Estrogen-induced pituitary tumorigenesis QTL 103.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)1192825253243914732Rat
8552891Epfw5Epididymal fat weight QTL 54.4epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1193113876238113876Rat
634338Hcar4Hepatocarcinoma resistance QTL 44.6liver integrity trait (VT:0010547)liver tumorous lesion number to liver area ratio (CMO:0001210)1193422268214537671Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1195804352257091168Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
631658Cm7Cardiac mass QTL 75.320.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)1196248093241248093Rat
1358292Cm37Cardiac mass QTL 376.20.00000081heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)1196248093241248093Rat
6480777Insul17Insulin level QTL 173.86blood insulin amount (VT:0001560)blood insulin level area under curve (AUC) (CMO:0000351)1197260913198211706Rat
6480783Insul19Insulin level QTL 194.33blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1197489281200611765Rat
1600374Mcs17Mammary carcinoma susceptibility QTL 173mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1197670404242670404Rat
1641926Teswt2Testicular weight QTL 22.82testis mass (VT:1000644)both testes wet weight (CMO:0000175)1197697768238755659Rat
2302375Bw83Body weight QTL 834.870.0002body mass (VT:0001259)body weight (CMO:0000012)1197697768242697768Rat
61376Bp42Blood pressure QTL 4223.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1197814409242814409Rat
1298084Thym4Thymus enlargement QTL 410.68thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1197814409242814409Rat
1357335Bw39Body weight QTL 393.3body mass (VT:0001259)body weight (CMO:0000012)1197814409242814409Rat
1331790Bp201Blood pressure QTL 2013.127arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1198211513225126682Rat
6480773Gluco64Glucose level QTL 645.09blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459200611765Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459259647894Rat
2292218Kidm35Kidney mass QTL 35kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1199368955224569684Rat
2314011Gluco56Glucose level QTL 56blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1199773958202166723Rat
2293694Bss38Bone structure and strength QTL 387.050.0001femur strength trait (VT:0010010)femur stiffness (CMO:0001674)1201554356246554356Rat
7394701Uae46Urinary albumin excretion QTL 463.60.0056urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1201554356246554356Rat
2300175Bmd40Bone mineral density QTL 4015.40.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)1201554356246554356Rat
2293655Bss36Bone structure and strength QTL 3610.660.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1201554356246554356Rat
2293674Bss39Bone structure and strength QTL 397.10.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)1201554356246554356Rat
10059587Bw173Body weight QTL 1733.230.025body mass (VT:0001259)body weight (CMO:0000012)1202069611247069611Rat


Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Hrtrt20  Heart rate QTL 20  Hr20    Symbol updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type recombinantinbred  
qtl_general not related to any known blood pressure QTL 625381