Ept6 QTL Report (Rattus norvegicus) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
QTL Registration

QTL: Ept6 (Estrogen-induced pituitary tumorigenesis QTL 6) Rattus norvegicus

Symbol: Ept6
Name: Estrogen-induced pituitary tumorigenesis QTL 6
RGD ID: 1358185
Trait: pituitary gland mass   (VT:0010496)    
Measurement Type: pituitary gland wet weight   (CMO:0000853)    
LOD Score: 6.7
P Value: Not Available
Variance: 11.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr836,556,347 - 51,556,347RGD_MAPPER_PIPELINE
mRatBN7.236,537,645 - 10,778,823RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.03571,136 - 6,000,866RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0311,361,817 - 31,948,244RGDRnor5.0
RGSC_v3.436,373,454 - 22,341,164RGDRGSC3.4
RGSC_v3.136,373,754 - 22,237,536RGD
Cross Type: Not Available
Strains Crossed: ACI/SegHsd COP/CrCrl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
ACI/SegHsd  (IEA)
COP/CrCrl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Tissue-Specific Actions of the Ept1, Ept2, Ept6, and Ept9 Genetic Determinants of Responsiveness to Estrogens in the Female Rat. Kurz SG, etal., Endocrinology. 2008 Apr 17;.
2. Genetic Bases of Estrogen-Induced Pituitary Tumorigenesis: Identification of Genetic Loci Determining Estrogen-Induced Pituitary Growth in Reciprocal Crosses between the ACI and Copenhagen Rat Strains. Strecker TE, etal., Genetics 2005 Jan 31;.
Related QTLs

Related QTL Description Reference
Ept17 maps to same region RGD:2292503


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
71049Hnmthistamine N-methyltransferase365918046623821Rat
1596837Tbpl2TATA box binding protein-like 2367718256793281Rat
1597180Hnrnpk-ps4heterogeneous nuclear ribonucleoprotein K, pseudogene 4367945726795942Rat
40987535LOC120101503uncharacterized LOC120101503368412646853409Rat
41360375Tcea1-ps3transcription elongation factor A1, pseudogene 3368768446880248Rat
1590877Eef1a1-ps19eukaryotic translation elongation factor 1 alpha 1, pseudogene 19369229736924383Rat
1563019Il36ginterleukin 36, gamma369483236954485Rat
1306869Il36ainterleukin 36, alpha369968517001400Rat
41133548Rpl23a-ps10ribosomal protein L23a, pseudogene 10370015337005484Rat
1307847Il36binterleukin 36, beta370248817030388Rat
1311212Il36rninterleukin 36 receptor antagonist370444197051016Rat
1305635Il1f10interleukin 1 family member 10370725117075439Rat
621159Il1rninterleukin 1 receptor antagonist371115677127451Rat
1310289Psd4pleckstrin and Sec7 domain containing 4371370697173571Rat
620434Pax8paired box 8371857217242363Rat
7632280LOC102549381uncharacterized LOC102549381372740047281851Rat
41378324LOC120101504uncharacterized LOC120101504372813367292177Rat
628852Cacna1bcalcium voltage-gated channel subunit alpha1 B373808927546104Rat
1307588Ehmt1euchromatic histone lysine methyltransferase 1375806807729046Rat
1309961Arrdc1arrestin domain containing 1377350027742195Rat
735079Zmynd19zinc finger, MYND-type containing 19377581337769722Rat
1304868Dph7diphthamide biosynthesis 7377703687778994Rat
1310241Mrpl41mitochondrial ribosomal protein L41377806587781576Rat
708466Pnpla7patatin-like phospholipase domain containing 7377825727861504Rat
1598011Gstp1-ps3glutathione S-transferase pi 1, pseudogene 3378302787831165Rat
619819NsmfNMDA receptor synaptonuclear signaling and neuronal migration factor378618467870615Rat
1561793Entpd8ectonucleoside triphosphate diphosphohydrolase 8378852777895517Rat
1306687Noxa1NADPH oxidase activator 1378954887907011Rat
1591939NrarpNotch-regulated ankyrin repeat protein379925827995136Rat
11504759LOC10835058860S ribosomal protein L23-like380012098002446Rat
1308019Tor4atorsin family 4, member A380042928007979Rat
1307832Nelfbnegative elongation factor complex member B380108838027403Rat
41390852Rnu6-136RNA, U6 small nuclear 136380245528024656Rat
1561978Stpg3sperm-tail PG-rich repeat containing 3380281228030546Rat
1562762Cimip2aciliary microtubule inner protein 2A380305488038370Rat
735101Tubb4btubulin, beta 4B class IVb380378388040294Rat
40972215LOC120101506uncharacterized LOC120101506380414698046587Rat
708551Slc34a3solute carrier family 34 member 3380442948050034Rat
1564535Rnf224ring finger protein 224380500888052416Rat
1560880Cysrt1cysteine rich tail 1380541958057846Rat
1565957Rnf208ring finger protein 208380578088059721Rat
1308479Ndor1NADPH dependent diflavin oxidoreductase 1380626298070873Rat
1306304Tmem203transmembrane protein 203380709048071732Rat
1562935Tprntaperin380761648083642Rat
1310259Ssna1SS nuclear autoantigen 1380849498086417Rat
1305546Anapc2anaphase promoting complex subunit 2380864348098182Rat
2318321Tmem210transmembrane protein 210381005958101645Rat
1308398Lrrc26leucine rich repeat containing 26381023618103687Rat
2736Grin1glutamate ionotropic receptor NMDA type subunit 1381036808130603Rat
1563595Man1b1mannosidase, alpha, class 1B, member 1381438778165007Rat
71073Dpp7dipeptidylpeptidase 7381650918169343Rat
1310630Uap1l1UDP-N-acetylglucosamine pyrophosphorylase 1 like 1381723358180505Rat
1590629Sapcd2suppressor APC domain containing 2381860898195119Rat
69266Entpd2ectonucleoside triphosphate diphosphohydrolase 2382135758219094Rat
1303156Npdc1neural proliferation, differentiation and control, 1382204468226446Rat
1589700Rpl28-ps4ribosomal protein L28, pseudogene 4382286568229403Rat
735019Fut7fucosyltransferase 7382376878242273Rat
620238Abca2ATP binding cassette subfamily A member 2382445158264545Rat
1307249Clic3chloride intracellular channel 3382714168274023Rat
1306215PaxxPAXX, non-homologous end joining factor382747628276322Rat
3433Ptgdsprostaglandin D2 synthase382818998284833Rat
41360871LOC120102031small nucleolar RNA SNORA48383091518309287Rat
1589474Lcn12lipocalin 12383124128315392Rat
1309074C8gcomplement C8 gamma chain383205038322087Rat
1305661Fbxw5F-box and WD repeat domain containing 5383225438327092Rat
1310457Traf2Tnf receptor-associated factor 2383419508366609Rat
1308073Edf1endothelial differentiation-related factor 1383770588381363Rat
708583Mamdc4MAM domain containing 4383823878391003Rat
1311355Phpt1phosphohistidine phosphatase 1383929268394325Rat
1560470Ajm1apical junction component 1 homolog383949428401323Rat
1307615Rabl6RAB, member RAS oncogene family-like 6384026668428588Rat
1560370Ccdc183coiled-coil domain containing 183384287848438948Rat
1561492Tmem141transmembrane protein 141384395338441491Rat
621221Fcnaficolin A384459048449128Rat
1306747Lcn8lipocalin 8384679348473691Rat
69320Lcn5lipocalin 5384731968477208Rat
11450160LOC10835054860S ribosomal protein L34 pseudogene384816378482006Rat
1302986Lcn6lipocalin 6384840138489577Rat
1564362Lcn10lipocalin 10384907818494334Rat
1588212Obp2aodorant binding protein 2A385059638509269Rat
1584970Bmycbrain expressed myelocytomatosis oncogene385125698513328Rat
2322918Eif4e-ps5eukaryotic translation initiation factor 4E, pseudogene 5385289558529742Rat
2293817Paepprogestagen associated endometrial protein385311368534430Rat
1562745Lcn3lipocalin 3385392608542792Rat
11418889Obp2bl1odorant binding protein 2B like 1385627738564851Rat
1564133Prknl1parkin RBR E3 ubiquitin protein ligase like 1385710218574555Rat
708374Obp2bodorant binding protein 2B385820748585258Rat
11497057Paepl1progestagen associated endometrial protein like 1386090118612151Rat
2323143Eif4e-ps4eukaryotic translation initiation factor 4E, pseudogene 4386137908614865Rat
11355973Lcn15l1lipocalin-15 like 1386160628620717Rat
1311348Glt6d1glycosyltransferase 6 domain containing 1386277938638537Rat
1306341Lcn9lipocalin 9386444278646782Rat
1564440Sohlh1spermatogenesis and oogenesis specific basic helix-loop-helix 1386629958667521Rat
621106Kcnt1potassium sodium-activated channel subfamily T member 1386829648736615Rat
1565022Camsap1calmodulin regulated spectrin-associated protein 1387461768806067Rat
2322732Rpl8-ps7ribosomal protein L8, pseudogene 7387618038762691Rat
7620876Pih1d1-ps1PIH1 domain containing 1, pseudogene 1388140638816906Rat
1359542Ubac1UBA domain containing 1388254448848055Rat
41264379LOC120101509uncharacterized LOC120101509388579318865742Rat
1309292Nacc2NACC family member 2388799528946660Rat
9300418LOC103691752uncharacterized LOC103691752389466738960015Rat
1564379Tmem250transmembrane protein 250389626578966349Rat
71078Lhx3LIM homeobox 3390264329035122Rat
1584720Qsox2quiescin sulfhydryl oxidase 2390349949064649Rat
41357595LOC120101510uncharacterized LOC120101510390645709072157Rat
1565512Ccdc187coiled-coil domain containing 187390701929127001Rat
628682Gpsm1G-protein signaling modulator 1391408169167828Rat
1308635DnlzDNL-type zinc finger391699489171727Rat
708370Card9caspase recruitment domain family, member 9391718149180310Rat
1309048Snapc4small nuclear RNA activating complex, polypeptide 4391820619200819Rat
1305930Entr1endosome associated trafficking regulator 1392009679207688Rat
727897Pmpcapeptidase, mitochondrial processing subunit alpha392077319216846Rat
620478Inpp5einositol polyphosphate-5-phosphatase E392167769229539Rat
2322350Sec16aSEC16 homolog A, endoplasmic reticulum export factor392296879264837Rat
3187Notch1notch receptor 1392779559323531Rat
9343998LOC103691754uncharacterized LOC103691754393273439349005Rat
41350547LOC120101512uncharacterized LOC120101512393753009386809Rat
41248999Rnu6-198RNA, U6 small nuclear 198393950339395140Rat
708507Egfl7EGF-like-domain, multiple 7394046229416879Rat
4888595Mir126amicroRNA 126a394150639415180Rat
2325386Mir126bmicroRNA 126b394150879415159Rat
1309229Agpat21-acylglycerol-3-phosphate O-acyltransferase 2394168379428567Rat
1308600Dipk1bdivergent protein kinase domain 1B394559149464169Rat
6493893LOC100911266uncharacterized LOC100911266394646199467510Rat
41191940LOC120102017small nucleolar RNA SNORA43394654269465556Rat
41287506LOC120102039small nucleolar RNA SNORA17394667009466831Rat
1583505LcnlLipocalin like394724569477218Rat
7725305Lcn4l3lipocalin 4 like 3394802719483554Rat
7704837LOC102547612uncharacterized LOC102547612394865869489575Rat
2324065Rnf138-ps3ring finger protein 138, pseudogene 3395131119513771Rat
620384Vegp2von Ebners gland protein 2395164579542088Rat
9085992LOC103691755activated RNA polymerase II transcriptional coactivator p15 pseudogene395312509532179Rat
619872Lcn1lipocalin 1395328609537859Rat
2322107Rpl9-ps31ribosomal protein L9, pseudogene 31395838959584606Rat
1597179Got2-ps5glutamic-oxaloacetic transaminase 2, pseudogene 5396791959680482Rat
628609Abo3histo-blood group ABO system transferase 3397438619761049Rat
1596715Lcn4lipocalin 4397992459802114Rat
1596705Lcn4l2lipocalin 4 like 2399143469917729Rat
1311152Abo2histo-blood group ABO system transferase 231001147510028397Rat
1595411Slbp-ps2stem-loop binding protein, pseudogene 231005182710052637Rat
1584372Rps13-ps10ribosomal protein S13, pseudogene 1031012808410128616Rat
41264059Lcn4l1lipocalin 4-like 131013785110141190Rat
2307241AboABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase31016208710182835Rat
7679486Ensa-ps1endosulfine alpha, pseudogene 131021229710212906Rat
1307382Surf6surfeit 631022145010232306Rat
1564893Med22mediator complex subunit 2231023375410238836Rat
1307586Rpl7aribosomal protein L7A31023902610241703Rat
41058081Snord24small nucleolar RNA, C/D box 2431023955610239630Rat
40983741LOC120101983small nucleolar RNA SNORD3631024052810240609Rat
41069721Snord36al1small nucleolar RNA, C/D box 36A like 131024084710240917Rat
41339187LOC120101984small nucleolar RNA SNORD3631024118710241257Rat
620527Surf1SURF1, cytochrome c oxidase assembly factor31024179310244686Rat
1565817Surf2surfeit 231024465410248502Rat
1561980Surf4surfeit 431024836010261537Rat
1307355Stkld1serine/threonine kinase-like domain containing 131026158310280850Rat
1306220Rexo4REX4 homolog, 3'-5' exonuclease31028065410291003Rat
1311594Adamts13ADAM metallopeptidase with thrombospondin type 1 motif, 1331029926410338464Rat
7600298LOC102548484uncharacterized LOC10254848431033579410342922Rat
1311501Cacfd1calcium channel flower domain containing 131033588110352437Rat
1309317Slc2a6solute carrier family 2 member 631034839510355208Rat
1306074Mymkmyomaker, myoblast fusion factor31038836310397294Rat
1305459Adamtsl2ADAMTS-like 231039777410434557Rat
1597714Fam163bfamily with sequence similarity 163, member B31043738310466458Rat
2489Dbhdopamine beta-hydroxylase31048826010505245Rat
621125Sardhsarcosine dehydrogenase31051055310575342Rat
7682627LOC102548789uncharacterized LOC10254878931053983710541623Rat
1306285Vav2vav guanine nucleotide exchange factor 231058468810754128Rat
6492996Brd3osBRD3 opposite strand31077022910771860Rat
1308925Brd3bromodomain containing 331077316310829675Rat
7489046Mir7578microRNA 757831077809010778171Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34186D3Mgh9145386581628658307Ratregion
34347D3Mgh1611931077870410778823Ratregion
34457D3Mgh1714031054935110549499Ratregion
35981D3Rat56197382271948227391Ratregion
37698D3Rat87217378127147812933Ratregion
39630D3Rat195235392860029286237Ratregion
38448D3Rat72122394516069451728Ratregion
38864D3Rat69232388837008883936Ratregion
39220D3Rat208128386897878689913Ratregion
41924D3Rat57199387173498717520Ratregion
42634D3Rat282238388239898824227Ratregion
42635D3Rat281154393252639325417Ratregion
728017D3Chm325031011460910114859Ratregion
67348D3Arb28286382861338286419Ratregion
1630266D3Got282221384787378478958Ratregion
1627944D3Cebr696389476188947714Ratregion
1628400D3Got275230393309699331199Ratregion
1629670D3Got243299393514749351773Ratregion
1632683D3Got251155384976738497828Ratregion
1635280D3Got200161370774957077656Ratregion
1636316D10Wox55113373818567381967Ratregion
1636473D3Got270193393309899331182Ratregion
1634001D3Got201147389063208906467Ratregion
1634376D3Cebr4220379385067938726Ratregion
7206374Pax881372075417209050Ratregion
5036017PMC85812P1361392851899285550Ratregion
5036159D11Bir2138372074557207593Ratregion
7205880D5S19690390749919075594Ratregion
5026148RH131098188383419758342163Ratregion
5026452RH13226821231002810710028319Ratregion
5026452RH13226821231016217210162384Ratregion
5026606RH132853202378640637864265Ratregion
5032245AI84717510231058471810584820Ratregion
5027215AW06089283373824487382531Ratregion
5027217AW21265513431023403510234169Ratregion
5033127RH137697162383951108395272Ratregion
5025510RH128599187380542678054454Ratregion
5025538RH128711195388255168825711Ratregion
5028075U3701719431058648410586678Ratregion
5025672RH12921719231051059710510789Ratregion
5025736RH12946220931051061110510820Ratregion
5051320AW05027686374688017468887Ratregion
5056049RH144153180381017128101892Ratregion
5057089AI502150183393977619397944Ratregion
5055229RH143681101383043568304457Ratregion
5055661RH14392964031024753310248173Ratregion
5057890BE101658166377735157773681Ratregion
5055115RH143614251392375869237839Ratregion
5058852BF38716020231067332510673527Ratregion
5052408AI31447298382262858226382Ratregion
5058134BF386669160391861699186329Ratregion
5057233AI501921208383001478300355Ratregion
5055487RH143830102383965628396664Ratregion
5059824BE09799415531054140710541561Ratregion
5050462RH134070182383410338341215Ratregion
5051050RH134408285382748578275142Ratregion
5050176RH13390519631077542510775621Ratregion
5051324AW06070599385130348513133Ratregion
5054339RH143167186376244807624666Ratregion
5051012RH134387180392165169216696Ratregion
5040690RH128428184377808187781002Ratregion
5041106RH128666212380833728083584Ratregion
5043814RH130243217365915196591736Ratregion
5045588RH13126421431043426010434474Ratregion
5041404RH12883718431024845510248639Ratregion
5044132RH130428187371732207173407Ratregion
5046192RH131611219384460868446305Ratregion
5046260RH131650182387364078736589Ratregion
5044448RH130608184391676089167792Ratregion
5044888RH13086119931023507010235269Ratregion
5045410RH13116219931028091610281115Ratregion
5044978RH130913203381651048165307Ratregion
5045058RH13095918631043608910436275Ratregion
5046062RH131536191381646348164825Ratregion
5047742RH132502210378612427861452Ratregion
5048980RH133217217392779629278179Ratregion
5045834RH131405216389627418962957Ratregion
5046846RH131988202377800827780284Ratregion
5049402RH13346019931023260110232800Ratregion
5049456RH133491219388320728832291Ratregion
5047112RH132140187380725238072710Ratregion
5047320RH132259204377313647731568Ratregion
5048652RH133027194380045038004697Ratregion
5042010RH129186181385133128513493Ratregion
5040836RH128511191380851138085304Ratregion
5042852RH129683200392168589217058Ratregion
5041254RH128751185380443398044524Ratregion
5043734RH130196150394646529464802Ratregion
5074968RH138323132374253537425485Ratregion
5074426RH138010137387358108735947Ratregion
5076290RH139090185388803588880543Ratregion
5072574RH136928789383262248327013Ratregion
5076948RH13947118731034850010348687Ratregion
5077084RH139551209382702438270452Ratregion
5077582RH139839206383821998382405Ratregion
5079674RH141138216380714738071689Ratregion
5077904RH14002721931077349410773713Ratregion
5078310RH140267220377350947735314Ratregion
5079740RH14117643331024188710242320Ratregion
5078734RH140521246391677319167977Ratregion
5080130RH14140020931038853610388745Ratregion
5080150RH141414206394165399416745Ratregion
5080164RH141422199394168839417082Ratregion
5078518RH140389120382702398270359Ratregion
5080524RH141629220384026868402906Ratregion
5078650RH14046715431028321410283368Ratregion
5073656RH137563198377770397777237Ratregion
5070648RH134624180392795959279775Ratregion
5072050RH135436208391820719182279Ratregion
5072120RH136662185381921538192338Ratregion
5074348RH137965175377694977769672Ratregion
5071498RH13511719331050489410505087Ratregion
5072426RH13684280331077599810776801Ratregion
5067064AU047987222381883828188604Ratregion
8693333rs1345583731043430610434306Ratregion
5067890AU047475244398663139866557Ratregion
5062512BF403347204394768089477158Ratregion
5062512BF403347204394831449483494Ratregion
5061540BF39665922131022157310221794Ratregion
5082239BI28093016931024820310248372Ratregion
5087016BE10759020331042628510426488Ratregion
5089481AU049181265392374769237744Ratregion
5081657BF41446012031034335210343472Ratregion
5081068RH14194620531022158910221794Ratregion
5081186RH142014193392149999215192Ratregion
5503619UniSTS:465388646381103168110962Ratregion
5504702PMC57740P2503381084668108969Ratregion
5504977Notch1192392808729281064Ratregion
5507109UniSTS:224573156378704197870575Ratregion
5507151UniSTS:224846167383421748342341Ratregion
5507119UniSTS:224625243382418688242111Ratregion
5501686UniSTS:265729247392797329279979Ratregion
5505554RH705311640382571858258825Ratregion
5506189UniSTS:498750987379938777994864Ratregion
5502531RH125204162391700089170170Ratregion
5502531RH125204162391700089171636Ratregion
Position Markers

Flank 1: (D3Rat277)
Rat AssemblyChrPosition (strand)Source
Rnor_5.0331,948,244 - 31,948,502NCBI
RGSC_v3.4322,341,164 - 22,341,421RGD
RGSC_v3.1322,237,536 - 22,237,793RGD
RH 3.4 Map3293.41UniSTS
RH 3.4 Map3293.41RGD
SHRSP x BN Map38.4099RGD
SHRSP x BN Map38.4099UniSTS
Peak: (D3Mgh9)
Rat AssemblyChrPosition (strand)Source
GRCr8329,056,275 - 29,056,420 (+)Marker Load Pipeline
mRatBN7.238,658,162 - 8,658,307 (+)MAPPER
Rnor_6.033,285,929 - 3,286,073NCBI
Rnor_5.038,648,011 - 8,648,155UniSTS
RGSC_v3.434,010,230 - 4,010,375RGD
RGSC_v3.434,010,231 - 4,010,375UniSTS
RGSC_v3.134,010,230 - 4,010,375RGD
Celera33,481,286 - 3,481,430UniSTS
SHRSP x BN Map32.2599RGD
SHRSP x BN Map32.2599UniSTS
FHH x ACI Map32.53RGD
Flank 2: (D3Mgh16)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2310,778,704 - 10,778,823 (+)MAPPER
Rnor_6.036,000,748 - 6,000,866NCBI
Rnor_5.0311,361,699 - 11,361,817UniSTS
RGSC_v3.436,373,335 - 6,373,454RGD
RGSC_v3.436,373,336 - 6,373,454UniSTS
RGSC_v3.136,373,636 - 6,373,754RGD
Celera35,573,283 - 5,573,401UniSTS
RH 3.4 Map316.9UniSTS
RH 3.4 Map316.9RGD
Cytogenetic Map3p12UniSTS


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558647Cm46Cardiac mass QTL 465.40.0000055heart mass (VT:0007028)heart wet weight (CMO:0000069)31077882330356773Rat
1358357Srcrtb1Stress Responsive Cort Basal QTL 16.360.002blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)3865816227494778Rat
6893355Bw101Body weight QTL 1010.40.38body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
4889966Bss95Bone structure and strength QTL 954.4tibia area (VT:1000281)tibia-fibula cross-sectional area (CMO:0001718)3136847613Rat
2292615Ept17Estrogen-induced pituitary tumorigenesis QTL 176.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)3653764510778823Rat
1558654Bw56Body weight QTL 564.50.0000171body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
10401810Kidm53Kidney mass QTL 53kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3822719447233430Rat
1298526Arunc3Aerobic running capacity QTL 32.2exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)3822719433703538Rat
8693641Alc30Alcohol consumption QTL 3020.739drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)31043430624512004Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)31077882330356773Rat
70191BpQTLcluster4Blood pressure QTL cluster 43arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)31077870450302886Rat
631545Bp85Blood pressure QTL 853.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3133278763Rat
631679Cm10Cardiac mass QTL 107.340.0001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3131158234Rat
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)3191609953Rat
1558657Cm43Cardiac mass QTL 436.63e-08heart mass (VT:0007028)heart wet weight (CMO:0000069)31077882330356773Rat
631568Bp92Blood pressure QTL 922.20.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3139874793Rat
70203Gcr2Gastric cancer resistance QTL 22.6stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)3865816227494778Rat
6893363Bw105Body weight QTL 1052.60.0036body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
70202Alc19Alcohol consumption QTL 192.5drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)3127494778Rat
2312664Scl62Serum cholesterol level QTL 620.05blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)3138710544Rat
61468Bp15Blood pressure QTL 154.4blood pressure trait (VT:0000183)pulse pressure (CMO:0000292)3133278763Rat
1358185Ept6Estrogen-induced pituitary tumorigenesis QTL 66.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)3653764510778823Rat
631831Alc8Alcohol consumption QTL 82.7consumption behavior trait (VT:0002069)calculated ethanol drink intake rate (CMO:0001615)3133230976Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Ept6

RGD Curation Notes
Note Type Note Reference