Rf11 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Rf11 (Renal function QTL 11) Rattus norvegicus

Symbol: Rf11
Name: Renal function QTL 11
RGD ID: 1300173
Previously known as: Specialized Center of Research QTL 40, 54, 78; SCOR40; SCOR54; SCOR78
Trait: renal blood flow trait   (VT:2000006)    
Measurement Type: absolute change in renal blood flow rate   (CMO:0001168)    
LOD Score: 3.38
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23121,056,165 - 145,956,249RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.03126,575,595 - 153,412,619RGD_MAPPER_PIPELINERnor6.0
Rnor_5.03133,062,559 - 158,307,423RGDRnor5.0
RGSC_v3.43121,618,954 - 147,990,731RGDRGSC3.4
RGSC_v3.13121,524,528 - 147,896,729RGD
Cross Type: Not Available
Strains Crossed: BN/SsNHsd SS/JrHsdMcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/SsNHsd  (IEA)
SS/JrHsdMcwi  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genomic map of cardiovascular phenotypes of hypertension in female Dahl S rats. Moreno C, etal., Physiol Genomics 2003 Nov 11;15(3):243-57. Epub 2003 Oct 07.
Related QTLs

Related QTL Description Reference
Rf10 interacts with RGD:727992
Rf12 maps to same region RGD:727992


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3725Bpifa2fBPI fold containing family A, member 2F3142521255142533462Rat
2200Bcl2l1Bcl2-like 13141253508141304582Rat
2205Bfsp1beaded filament structural protein 13131195087131252668Rat
71087Epb41l1erythrocyte membrane protein band 4.1-like 13144929195145052723Rat
2752Gssglutathione synthetase3144047849144078197Rat
3542Rbbp9RB binding protein 9, serine hydrolase3131925095131939042Rat
2808Foxa2forkhead box A23135470123135474326Rat
3273Pcsk2proprotein convertase subtilisin/kexin type 23130880422131183127Rat
619910Dynlrb1dynein light chain roadblock-type 13143742427143764227Rat
2858Id1inhibitor of DNA binding 13141210666141212420Rat
3345Plcb4phospholipase C, beta 43122952965123322522Rat
619725Entpd6ectonucleoside triphosphate diphosphohydrolase 63139575659139598163Rat
3460Pygbglycogen phosphorylase B3139611724139658521Rat
2937Jag1jagged canonical Notch ligand 13124406794124442220Rat
3764Sstr4somatostatin receptor 43135854826135856689Rat
2432Cst3cystatin C3136336923136340796Rat
620279Sert1Sertoli cell protein 13136114902136118882Rat
727825Piguphosphatidylinositol glycan anchor biosynthesis, class U3143784831143881268Rat
619952Nsfl1cNSFL1 cofactor3139978306140002876Rat
621299Thbdthrombomodulin3135863366135867018Rat
620912Nfs1NFS1 cysteine desulfurase3144637309144659660Rat
708514Cst12cystatin 123136235052136238912Rat
620202Mmp24matrix metallopeptidase 243144279096144323572Rat
621251Cd93CD93 molecule3135891859135898378Rat
620934Mylk2myosin light chain kinase 23141376450141388357Rat
620151Spag4sperm associated antigen 43144581006144587879Rat
620111Ncoa6nuclear receptor coactivator 63143890896143961916Rat
621663Csnk2a1casein kinase 2 alpha 13140709984140756757Rat
620589Cst11cystatin 113136211414136214138Rat
628782Pxmp4peroxisomal membrane protein 43143093371143110620Rat
3431Bpifa2BPI fold containing family A, member 23142493379142501343Rat
619870Ggt7gamma-glutamyltransferase 73143978073144004597Rat
620507Crnkl1crooked neck pre-mRNA splicing factor 13133338593133354329Rat
708555LOC257643cystatin SC3136224721136231441Rat
619818Bpifa1BPI fold containing family A, member 13142627810142633553Rat
708350Dlgap4DLG associated protein 43145124189145271791Rat
1303274Dnmt3bDNA methyltransferase 3 beta3142130592142169124Rat
1304809Ankef1ankyrin repeat and EF-hand domain containing 13123847817123883060Rat
708432Trib3tribbles pseudokinase 33140809634140815230Rat
727814P22k15cystatin related protein 23136960300136967358Rat
735160Cysscystatin S3137432272137436610Rat
69260Ahcyadenosylhomocysteinase3143569134143584359Rat
62075Rpn2ribophorin II3145941787145989271Rat
708404Rbck1RANBP2-type and C3HC4-type zinc finger containing 13140789079140806017Rat
69256Slc24a3solute carrier family 24 member 33132552119133051192Rat
708387Cdk5rap1CDK5 regulatory subunit associated protein 13142838081142872669Rat
735085Tp53inp2tumor protein p53 inducible nuclear protein 23143881427143890104Rat
735192Eif2s2eukaryotic translation initiation factor 2 subunit beta3143374652143395460Rat
1303001Pofut1protein O-fucosyltransferase 13141708618141735558Rat
621781Mapre1microtubule-associated protein, RP/EB family, member 13142218846142246990Rat
69422Cox4i2cytochrome c oxidase subunit 4i23141228443141239337Rat
2785HckHCK proto-oncogene, Src family tyrosine kinase3141571587141614696Rat
1306815Kif3bkinesin family member 3B3141758466141798012Rat
2115Andproandrogen regulated protein3136718601136725131Rat
2003Asipagouti signaling protein3143473584143561170Rat
728892E2f1E2F transcription factor 13143064535143075362Rat
3728Snap25synaptosome associated protein 253124041898124123761Rat
1304644Slc52a3solute carrier family 52 member 33140498924140515845Rat
1307465Mgme1mitochondrial genome maintenance exonuclease 13131640770131649933Rat
1307417Cstl1cystatin-like 13136199914136204912Rat
1305202Ccm2lCCM2 like scaffold protein3141533470141549136Rat
620102Gdf5growth differentiation factor 53144454306144458757Rat
1305146Tmx4thioredoxin-related transmembrane protein 43121856237121899680Rat
1306009NanpN-acetylneuraminic acid phosphatase3139826549139841655Rat
1306130Ovol2ovo-like zinc finger 23131677388131707844Rat
1305096Pdrg1p53 and DNA damage regulated 13141477561141483730Rat
1306357Sun5Sad1 and UNC84 domain containing 53142334902142355330Rat
1306991Lamp5lysosomal-associated membrane protein family, member 53123372462123384970Rat
1307332Srxn1sulfiredoxin 13140604490140610050Rat
1306428Polr3fRNA polymerase III subunit F3131908466131924838Rat
1307068Snta1syntrophin, alpha 13142876285142906737Rat
1305991Procrprotein C receptor3144254596144258863Rat
708352Defb22defensin beta 223140957093140961373Rat
1306560Rem1RRAD and GEM like GTPase 13141103722141112206Rat
1305020Phf20PHD finger protein 203144710253144816696Rat
1307071Kizkizuna centrosomal protein3134277631134385260Rat
1307768Tm9sf4transmembrane 9 superfamily member 43141627128141675386Rat
1310030Sptlc3serine palmitoyltransferase, long chain base subunit 33126847878126978010Rat
1305873Rin2Ras and Rab interactor 23133086858133303604Rat
1305373Eif6eukaryotic translation initiation factor 63144325038144331396Rat
1305990Dusp15dual specificity phosphatase 153141408495141419137Rat
1307786Commd7COMM domain containing 73142099566142114348Rat
1305253Otorotoraplin3130415339130418601Rat
1305867Snphsyntaphilin3140098540140139342Rat
735183Map1lc3amicrotubule-associated protein 1 light chain 3 alpha3143783024143784670Rat
1307752Rab5ifRAB5 interacting factor3145357990145368012Rat
1307228RalyRALY heterogeneous nuclear ribonucleoprotein3143306039143370542Rat
1309914Trpc4aptransient receptor potential cation channel, subfamily C, member 4 associated protein3144122003144192986Rat
1310527Agfg1-ps1ArfGAP with FG repeats 1, pseudogene 13138777896138779912Rat
1308946Hm13histocompatibility minor 133141145769141184703Rat
1308443Nkx2-2NK2 homeobox 23134619701134630282Rat
1310978Cst5cystatin D3137573194137577754Rat
1308023Ralgapa2Ral GTPase activating protein catalytic subunit alpha 23133661955133938821Rat
1308904Fam110afamily with sequence similarity 110, member A3140474484140485074Rat
1309154Cst7cystatin F3139396830139405557Rat
1308385Scp2d1SCP2 sterol-binding domain containing 13132201979132202729Rat
1310753Syndig1synapse differentiation inducing 13138030995138234646Rat
1311278Sel1l2SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase3127586031127713857Rat
1310866Bpifb2BPI fold containing family B, member 23142356990142377053Rat
1309088Cbfa2t2CBFA2/RUNX1 partner transcriptional co-repressor 23142936945143043205Rat
1308369Samhd1SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 13145761549145794420Rat
1311344Dzank1double zinc ribbon and ankyrin repeat domains 13131855890131908217Rat
1311602Bpifb6BPI fold containing family B, member 63142383701142395308Rat
1307909Banf2BANF family member 23131387107131442837Rat
1310190Snx5sorting nexin 53131621709131641205Rat
1310192Tspy26testis specific protein, Y-linked 263141690653141692729Rat
1310194Snrpb2small nuclear ribonucleoprotein polypeptide B23130399239130408821Rat
1305667Vsx1visual system homeobox 13139514270139521869Rat
1308464Tcf15transcription factor 153140638984140644766Rat
1310699Sec23bSec23 homolog B, COPII coat complex component3131939011131981489Rat
1308591Tasp1taspase 13127176416127408039Rat
1310071Rbm39RNA binding motif protein 393144662998144696222Rat
1311519Cfap61cilia and flagella associated protein 613133354400133633310Rat
1307539Angpt4angiopoietin 43140420389140454213Rat
1304985Nkx2-4NK2 homeobox 43134514368134517243Rat
1306536Rrbp1ribosome binding protein 13131314996131376930Rat
1305489Acss2acyl-CoA synthetase short-chain family member 23144003808144047452Rat
1310218Xrn25'-3' exoribonuclease 23134436916134509308Rat
1306246Acss1acyl-CoA synthetase short-chain family member 13139450383139500325Rat
1307999Plagl2PLAG1 like zinc finger 23141695322141708567Rat
1307994Myh7bmyosin heavy chain 7B3144076911144122714Rat
1308144Ergic3ERGIC and golgi 33144525059144534813Rat
1308530Scand1SCAN domain-containing 13144818615144819479Rat
1308250Fer1l4fer-1-like family member 43144536099144571634Rat
1309538Kat14lysine acetyltransferase 143131736430131781732Rat
1309829Ndufaf5NADH:ubiquinone oxidoreductase complex assembly factor 53127507931127537477Rat
1309327Nxt1nuclear transport factor 2-like export factor 13136108975136111897Rat
1311623Btbd3BTB domain containing 33125591427125621660Rat
1310146Kif16bkinesin family member 16B3129974692130254194Rat
1306067Esf1ESF1 nucleolar pre-rRNA processing protein homolog3127454744127507941Rat
1307709Sdcbp2syndecan binding protein 23140060746140098063Rat
1307713Naa20N(alpha)-acetyltransferase 20, NatB catalytic subunit3133322036133336843Rat
1309846Chmp4bcharged multivesicular body protein 4B3143170822143211376Rat
1310124Necab3N-terminal EF-hand calcium binding protein 33143049477143064372Rat
1308874Apmapadipocyte plasma membrane associated protein3139409020139437296Rat
1310679Foxs1forkhead box S13141397012141398281Rat
1308814MkksMKKS centrosomal shuttling protein3124201877124221142Rat
1306152Ninlninein-like3139748353139814683Rat
1303074Edem2ER degradation enhancing alpha-mannosidase like protein 23144201604144227423Rat
1563047Bpifb1BPI fold containing family B, member 13142672995142706258Rat
1559924RGD1559924similar to Eukaryotic translation initiation factor 1 (eIF1)3137070999137073720Rat
1562551Ism1isthmin 13127023322127102228Rat
1564796Scrt2scratch family transcriptional repressor 23140581593140593299Rat
1311235Myl9myosin light chain 93145281943145288333Rat
1563415Rspo4R-spondin 43140357256140391780Rat
1564048Tmem74btransmembrane protein 74B3140218965140233810Rat
1564277Timm17al1-ps1translocase of inner mitochondrial membrane 17a-like 1, pseudogene 13142523181142523902Rat
1562321Gzf1GDNF-inducible zinc finger protein 13136119004136131223Rat
1561174Bpifb4BPI fold containing family B, member 43142423571142448044Rat
1359622Ttll9tubulin tyrosine ligase like 93141429351141475965Rat
1560097Defb23defensin beta 233140923474140927686Rat
1564726Zfp341zinc finger protein 3413143122699143156250Rat
1559448LOC502684hypothetical protein LOC5026843140876987140907711Rat
1562262Cep250centrosomal protein 2503144470946144516125Rat
1311032Cst9lcystatin 9-like3136288093136290906Rat
1311821Dtd1D-aminoacyl-tRNA deacylase 13131995831132158646Rat
1311148Cpne1copine 13144587548144629603Rat
1311678Cnbd2cyclic nucleotide binding domain containing 23144819166144884825Rat
2617Fkbp1aFKBP prolyl isomerase 1A3140040359140060107Rat
1311066Aar2AAR2 splicing factor3145057368145079838Rat
1564765Defb25defensin beta 253141098856141099696Rat
1559541Defb24defensin beta 243141046571141052706Rat
1312009Pak5p21 (RAC1) activated kinase 53123395678123703967Rat
1359224Xkr7XK related 73141500908141525062Rat
1562393Defb21defensin beta 213141042844141044159Rat
1564030Defb29defensin beta 293141004098141009379Rat
1359424Ndrg3NDRG family member 33145587505145650896Rat
1564902Defb36defensin beta 363141078001141086832Rat
1359556Itchitchy E3 ubiquitin protein ligase3143642348143733745Rat
1303293Tbc1d20TBC1 domain family, member 203140768537140787010Rat
1561517C3h20orf144similar to human chromosome 20 open reading frame 1443143053971143055327Rat
1563136RGD1563136similar to Cystatin-related protein 2 precursor (Prostatic 22 kDa glycoprotein P22K15)3137116122137122502Rat
1311894Tpx2TPX2, microtubule nucleation factor3141318428141360684Rat
1560115Tgif2TGFB-induced factor homeobox 23145333152145348599Rat
1561878Asxl1ASXL transcriptional regulator 13141814012141881526Rat
3344Plcb1phospholipase C beta 13122059968122772896Rat
1566383RGD1566383similar to Cystatin S precursor (LM protein)3137470409137473857Rat
1585681Uqcc1ubiquinol-cytochrome c reductase complex assembly factor 13144353276144445810Rat
1585687Fam83cfamily with sequence similarity 83, member C3144333736144339758Rat
1586408Rpl18-ps9ribosomal protein L18, pseudogene 93134407050134408065Rat
1564873Cst13cystatin 133136267070136276860Rat
1587297Rpl12-ps7ribosomal protein L12, pseudogene 73143611486143612104Rat
1587300Galk1-ps2galactokinase 1, pseudogene 23139054358139055580Rat
1587301Cdca7l-ps2cell division cycle associated 7 like, pseudogene 23139094276139095488Rat
1587302Eno1-ps30enolase 1, pseudogene 303135055218135056527Rat
1587304Pcbp2-ps6poly(rC) binding protein 2, pseudogene 63126118114126177008Rat
1586461Bcl2l12-ps1Bcl2 like 12, pseudogene 13134152509134153252Rat
1587528Psmf1proteasome inhibitor subunit 13140235371140260546Rat
1583213Rtkn-ps1rhotekin, pseudogene 13122050907122052916Rat
1587557Rad21l1RAD21 cohesin complex component like 13140160128140188324Rat
1563120Slx4ipSLX4 interacting protein3124220215124396797Rat
1582864LOC690246similar to 60S ribosomal protein L27a3141747835141748599Rat
1566320Smim26small integral membrane protein 263131990147131991779Rat
1565792Defb28defensin beta 283140988032140993767Rat
1562570Abhd12abhydrolase domain containing 12, lysophospholipase3139659315139719529Rat
1561343Tldc2TBC/LysM-associated domain containing 23145742381145758847Rat
1562246Gins1GINS complex subunit 13139724513139745930Rat
1564413Defb26defensin beta 263140977489140980893Rat
1559748Bpifa5BPI fold containing family A, member 53142646103142652884Rat
1565177Defb20defensin beta 203140948154140950777Rat
1566283Zfp133zinc finger protein 1333131829404131847552Rat
1566005Flrt3fibronectin leucine rich transmembrane protein 33127994491128008137Rat
1562071Sla2Src-like-adaptor 23145367070145383586Rat
1565179Dsn1DSN1 component of MIS12 kinetochore complex3145652741145668025Rat
1565143RGD1565143similar to serine/threonine kinase3139345180139365440Rat
1565613Bpifb3BPI fold containing family B, member 33142401068142415684Rat
1565109Cyssl1cystatin S like 13137484098137489304Rat
1565648RGD1565648similar to Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)3138989652138992491Rat
1563627Soga1suppressor of glucose, autophagy associated 13145669102145741578Rat
1563510Nol4lnucleolar protein 4-like3141884840142007668Rat
1586322Nrsn2neurensin 23140838813140847291Rat
1589750Hao1hydroxyacid oxidase 13121757400121828721Rat
1586313Sox12SRY-box transcription factor 123140859499140860518Rat
1589645Dnmt3b-ps1DNA methyltransferase 3B, pseudogene 13142152555142210602Rat
1589649NapbNSF attachment protein beta3136132248136179225Rat
1588548Pax1paired box 13134789291134801636Rat
1585203Zcchc3zinc finger CCHC-type containing 33140872460140875851Rat
1587111Romo1reactive oxygen species modulator 13144659709144661310Rat
1585184Sms-ps2spermine synthase, pseudogene 23142943678142945260Rat
1589892Rpsa-ps6ribosomal protein SA, pseudogene 63139368299139380092Rat
1585000Galk1-ps4galactokinase 1, pseudogene 43139360447139361681Rat
1585001Tead2-ps1TEA domain transcription factor 2, pseudogene 13138583467138585546Rat
1585002Amd1-ps3adenosylmethionine decarboxylase 1, pseudogene 33134533682134535868Rat
2434Cst8cystatin 83136244586136255412Rat
1589647Nfkb2-ps1nuclear factor kappa B subunit 2, pseudogene 13139964528139967770Rat
1588491Mrto4-ps5mRNA turnover 4, ribosome maturation factor, pseudogene 53122831191122833956Rat
1594668LOC690597similar to 60S ribosomal protein L383143285738143286894Rat
1596174Fth1-ps5ferritin heavy chain 1, pseudogene 53136914893136915744Rat
1597364Efcab8EF-hand calcium binding domain 83142257195142323743Rat
1596102Bpifa3BPI fold containing family A, member 33142609748142619703Rat
1596924LOC678760similar to Dipeptidyl-peptidase 3 (Dipeptidyl-peptidase III) (DPP III) (Dipeptidyl aminopeptidase III) (Dipeptidyl arylamidase III)3136920237136922858Rat
1593544Nipa1-ps1NIPA magnesium transporter 1, pseudogene 13138222280138223445Rat
1596015Morf4l2-ps1mortality factor 4 like 2, pseudogene 13142752096142752789Rat
1594832LOC689220similar to Cystatin S precursor (LM protein)3137328443137333183Rat
1594733LOC690521similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30)3142792113142792852Rat
1591076Mcl1-ps1MCL1 apoptosis regulator, BCL2 family member, pseudogene 13138869221138871032Rat
1589571Defb27defensin beta 273141065135141068767Rat
1588365Pycr3-ps1pyrroline-5-carboxylate reductase 3, pseudogene 13131654565131656473Rat
1588366Dstndestrin, actin depolymerizing factor3131284647131311361Rat
1595511Rbl1RB transcriptional corepressor like 13145806160145869434Rat
1591318Macrod2mono-ADP ribosylhydrolase 23127720066129737511Rat
1596031Bpifb5BPI fold containing family B, member 53142706316142728330Rat
1597027Ldha-ps10lactate dehydrogenase A, pseudogene 103127091593127092669Rat
1594333Rbm12RNA binding motif protein 123144587548144629950Rat
1594746LOC690507similar to Vomeromodulin3142758865142770106Rat
1591127Mcts2malignant T cell amplified sequence 23141162268141164108Rat
1597405Cstdc2cystatin domain containing 23136302588136336782Rat
2320129Wbp4-ps1WW domain binding protein 4, pseudogene 13130893186130894522Rat
2320137Slc25a5-ps2solute carrier family 25 member 5, pseudogene 23126797239126798867Rat
2320277LOC100361388high-mobility group nucleosomal binding domain 2-like3126570438126573173Rat
2320314Gapdh-ps49Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 493126310113126311401Rat
2318489LOC100362296protein S100-A11-like3138537579138539300Rat
2320328Mrpl47-ps2mitochondrial ribosomal protein L47, pseudogene 23126190337126191320Rat
2320350Rplp1-ps2ribosomal protein lateral stalk subunit P1, pseudogene 23124192239124192965Rat
2321481Mroh8maestro heat-like repeat family member 83145873995145942439Rat
2323164Hnrnph1-ps2heterogeneous nuclear ribonucleoprotein H1, pseudogene 23140311910140336606Rat
2323360Tmem74bostransmembrane 74B, opposite strand3140198623140209259Rat
2323465Bpifa6BPI fold containing family A, member 63142465236142483857Rat
2324275Ppp3r1-ps2protein phosphatase 3, regulatory subunit B, alpha, pseudogene 23138924775138926246Rat
2325514Mir499amicroRNA 499a3144110469144110533Rat
6489613LOC100911984sperm motility kinase-like3138374367138387147Rat
6493462Rpl6-ps12ribosomal protein L6, pseudogene 123121885601121891992Rat
6493921Rps10-ps1ribosomal protein S10, pseudogene 13140996660140997392Rat
6491130Actl10actin-like 103143055425143058577Rat
6486258Insm1INSM transcriptional repressor 13133639790133642963Rat
6502443Cdca7l-ps1cell division cycle associated 7 like, pseudogene 13138440448138444509Rat
7489021Mir6334microRNA 63343143883158143883256Rat
7514905LOC102550306uncharacterized LOC1025503063144514060144524979Rat
7523536Rps2-ps10ribosomal protein S2, pseudogene 103145652737145653710Rat
7524436LOC102549291zinc finger protein 120-like3138835647138983464Rat
7504683LOC102555661uncharacterized LOC1025556613139302498139325804Rat
7541619LOC102554820uncharacterized LOC1025548203138812737138837689Rat
7521950LOC102554288uncharacterized LOC1025542883145431036145466045Rat
7529371LOC102549983uncharacterized LOC1025499833136053090136108756Rat
7509526LOC102554505uncharacterized LOC1025545053129787752129844601Rat
7533201LOC102554874sperm motility kinase X-like3138846516138851436Rat
7520429LOC102549662uncharacterized LOC1025496623135584899135588967Rat
7631496LOC102551848uncharacterized LOC1025518483137910697137956233Rat
7664087LOC102547911uncharacterized LOC1025479113124901646124968413Rat
7634195LOC102554664uncharacterized LOC1025546643141615499141621688Rat
7634892Rpl7-ps29ribosomal protein L7, pseudogene 293142730445142731907Rat
7651008LOC102553281uncharacterized LOC1025532813141107781141145711Rat
7574865LOC102548897zinc finger protein 844-like3136218562136219077Rat
7656316LOC102547396uncharacterized LOC1025473963139500272139521248Rat
7587343LOC102547081uncharacterized LOC1025470813134516091134524752Rat
7616921LOC102551821uncharacterized LOC1025518213145300178145310983Rat
7617590LOC102548210uncharacterized LOC1025482103126677895126702104Rat
7571782LOC102555365uncharacterized LOC1025553653133311274133322017Rat
7597217Abt1-ps2activator of basal transcription 1, pseudogene 23139733866139736658Rat
7598717LOC102549926uncharacterized LOC1025499263143633881143642358Rat
7547607LOC102555578zinc finger protein 120-like3138545521138560500Rat
7551590LOC102555033zinc finger protein 709-like3138655982138675874Rat
7605010LOC102550304uncharacterized LOC1025503043131522575131526274Rat
7691208LOC102548278uncharacterized LOC1025482783139876642139907159Rat
7694064LOC102548446uncharacterized LOC1025484463139968512139978326Rat
7751921Rack1-ps3receptor for activated C kinase 1, pseudogene 33132057645132058996Rat
7678473Rps10-ps7ribosomal protein S10, pseudogene 73142962044142962626Rat
7684453LOC102553350uncharacterized LOC1025533503141362126141376351Rat
7689509LOC102548575uncharacterized LOC1025485753140037968140040907Rat
7717583LOC102555217zinc finger protein 120-like3138595665138627247Rat
7742870LOC102549488uncharacterized LOC1025494883138980916139033402Rat
7675326LOC102548513uncharacterized LOC1025485133127972897127993551Rat
7747897Zfp120zinc finger protein 1203138763244138791042Rat
7679867Ing5-ps1inhibitor of growth family, member 5, pseudogene 13123043263123046224Rat
7709640LOC102547655uncharacterized LOC1025476553124631974124666366Rat
9145171LOC103691916uncharacterized LOC1036919163135994960136042640Rat
9186323LOC103691957ferritin light chain 1 pseudogene3144914641144915944Rat
9163856P22k15-ps1cystatin related protein 2, pseudogene 13136534719136631118Rat
9202998LOC103691939elongation factor 1-alpha 1 pseudogene3143138360143139773Rat
9238136LOC103691945uncharacterized LOC1036919453145223628145230600Rat
9282085LOC103691897uncharacterized LOC1036918973121755209121758182Rat
9338501LOC103691943uncharacterized LOC1036919433143962149143967317Rat
9463287LOC103691911uncharacterized LOC1036919113131577961131591149Rat
9476012LOC103690174sperm motility kinase X-like3139125202139171387Rat
9406645LOC103691935uncharacterized LOC1036919353142062129142076395Rat
9414358LOC103691953putative small nuclear ribonucleoprotein polypeptide E-like protein 13143118822143119593Rat
9854662Rps27a-ps8ribosomal protein S27a, pseudogene 83142241989142242426Rat
11366792Eif4a1-ps3eukaryotic translation initiation factor 4A1, pseudogene 33133493365133494262Rat
11433440Rps29-ps15ribosomal protein S29, pseudogene 153140488241140488613Rat
11434931LOC108350503uncharacterized LOC1083505033141518484141522235Rat
11469368LOC10835054560S ribosomal protein L34 pseudogene3145838414145840322Rat
11427923Trnaa-agc3transfer RNA alanine (anticodon AGC) 33143128296143128368Rat
11440623LOC108350484uncharacterized LOC1083504843133074431133086736Rat
11440632LOC108350490uncharacterized LOC1083504903134823759134827977Rat
11441130LOC108350618uncharacterized LOC1083506183142036623142040244Rat
11453203LOC108350483probable rRNA-processing protein EBP2 pseudogene3133160018133161377Rat
11414648LOC108350499uncharacterized LOC1083504993139537657139575790Rat
11426867LOC108350486uncharacterized LOC1083504863133710823133715862Rat
11373702LOC108350619glyceraldehyde-3-phosphate dehydrogenase pseudogene3144635975144637182Rat
11400029Rnaset2-ps1ribonuclease T2, pseudogene 13138600084138600943Rat
11390742LOC108350474uncharacterized LOC1083504743124346668124352305Rat
11391622Smokl-ps2sperm motility kinase like, pseudogene 23139235422139238434Rat
11403788LOC10835050240S ribosomal protein S2 pseudogene3141273638141274748Rat
11382618LOC108350494UPF0472 protein C16orf72 homolog pseudogene3138736034138749614Rat
11501358LOC108350480glyceraldehyde-3-phosphate dehydrogenase pseudogene3131933978131936843Rat
11495800Smokxl-ps4sperm motility kinase X like, pseudogene 43139056925139057765Rat
11507744LOC108350472uncharacterized LOC1083504723123833102124042494Rat
11483653LOC108350487uncharacterized LOC1083504873133969341133998166Rat
11487974LOC108350489uncharacterized LOC1083504893134664020134683310Rat
28912741Mmp24osMMP24 opposite strand3144322936144324449Rat
41355136LOC120102024small nucleolar RNA SNORA483144829292144829430Rat
41085601LOC120102001U1 spliceosomal RNA3143962670143962834Rat
41111792LOC120101728uncharacterized LOC1201017283135540927135690802Rat
41112066LOC120101704uncharacterized LOC1201017043125747891125756388Rat
41136366LOC120101757uncharacterized LOC1201017573140781285140784381Rat
41203361Trnat-agu15transfer RNA threonine (anticodon AGU) 153133229015133229095Rat
41276891Snord17small nucleolar RNA, C/D box 173131636460131636698Rat
41322528LOC120101734uncharacterized LOC1201017343138328158138381985Rat
41088778Zfyve21-ps1zinc finger FYVE-type containing 21, pseudogene 13143013286143014456Rat
41204979Ankrd40-ps1ankyrin repeat domain 40, pseudogene 13138303376138307118Rat
41284146LOC120101747uncharacterized LOC1201017473139704462139719166Rat
41284298Eif1-ps6eukaryotic translation initiation factor 1, pseudogene 63136905975136915055Rat
41357829LOC120101941U6 spliceosomal RNA3127769125127769231Rat
41088816LOC120101727uncharacterized LOC1201017273135551775135567986Rat
41141231LOC120101751uncharacterized LOC1201017513140249147140250030Rat
41170365LOC120101678uncharacterized LOC1201016783122855153122862617Rat
41205609LOC120101765uncharacterized LOC1201017653145082290145082766Rat
41280229LOC120101467cystatin-S-like3137300845137312492Rat
41328501LOC120102019small nucleolar RNA SNORA183144015157144015287Rat
41119407LOC120101733uncharacterized LOC1201017333138389404138405290Rat
41119604Dnajb6-ps7DnaJ heat shock protein family (Hsp40) member B6, pseudogene 73139095867139098394Rat
41146739Ptges3-ps3prostaglandin E synthase 3, pseudogene 33138421319138423547Rat
41329311Pomp-ps2proteasome maturation protein, pseudogene 23144266741144267794Rat
41330244LOC120101722uncharacterized LOC1201017223131481568131487131Rat
41095606LOC12010192240S ribosomal protein S12-like3143816918143818611Rat
41096059LOC120101721uncharacterized LOC1201017213131396632131400429Rat
41119918LOC120101464cystatin-S-like3137205417137228473Rat
41211223S100a11-ps3S100 calcium binding protein A11, pseudogene 33139245086139246190Rat
41262294Smokxl-ps6sperm motility kinase X like, pseudogene 63138463218138465215Rat
41150898Smokxl-ps7sperm motility kinase X like, pseudogene 73139079155139079993Rat
41153664LOC120102011small nucleolar RNA SNORA443143401085143401193Rat
41098665LOC120101949U6 spliceosomal RNA3139543541139543645Rat
41098980LOC120102060small nucleolar RNA SNORA173130325643130325780Rat
41155485LOC120102098small nucleolar RNA U133142572873142572974Rat
41265125LOC120101769protein NDRG3-like3145508996145544082Rat
41288053LOC120101714glyceraldehyde-3-phosphate dehydrogenase-like3126349641126350664Rat
41343396LOC120101698uncharacterized LOC1201016983125347840125378621Rat
41181263LOC120101995U7 small nuclear RNA3145873716145873780Rat
41289263LOC120102018small Cajal body-specific RNA 43123674265123674392Rat
41345769LOC120101759uncharacterized LOC1201017593142252406142257077Rat
41396104Trnaa-agc54transfer RNA alanine (anticodon AGC) 543134357728134357802Rat
41158921LOC120101950U6 spliceosomal RNA3133775907133776009Rat
41183431LOC120102029small nucleolar RNA SNORA483136282679136282826Rat
41398160LOC120101767uncharacterized LOC1201017673145322745145333091Rat
41070159LOC120101921uncharacterized LOC1201019213128555108128587916Rat
41127869LOC120102104small nucleolar RNA U853135571162135571451Rat
41159423Rnu6-524RNA, U6 small nuclear 5243143809843143809946Rat
41184973LOC120101466cystatin-S-like3137268963137273711Rat
41292401LOC120101763uncharacterized LOC1201017633143397601143401566Rat
41292422Anp32e-ps1acidic nuclear phosphoprotein 32 family member E, pseudogene 13140155661140159968Rat
41348658LOC120101686uncharacterized LOC1201016863124333829124338856Rat
41400309Ndrg3-ps1NDRG family member 3, pseudogene 13145470533145506438Rat
41128917Ppp3r1-ps3protein phosphatase 3, regulatory subunit B, alpha, pseudogene 33139211426139221015Rat
41197209LOC120101748uncharacterized LOC1201017483139954705139964363Rat
41294038LOC120101749uncharacterized LOC1201017493139891547139936867Rat
41400483LOC120101760uncharacterized LOC1201017603142444035142447913Rat
41081935Galk1-ps3galactokinase 1, pseudogene 33139074227139079172Rat
41163706LOC120101716uncharacterized LOC1201017163127209267127212053Rat
41199054Nsa2-ps5NSA2 ribosome biogenesis factor, pseudogene 53122162700122163365Rat
41231371LOC120102071small nucleolar RNA SNORA173130137075130137194Rat
41132131LOC120101462uncharacterized LOC1201014623135737056135740540Rat
41164779Rpl21-ps5ribosomal protein L21, pseudogene 53130921346130921842Rat
41320428Gapdh-ps87Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 873127431140127432363Rat
41352990Rpl13-ps17ribosomal protein L13, pseudogene 173138062150138092132Rat
41201670Chp1-ps1calcineurin-like EF-hand protein 1, pseudogene 13125069990125070498Rat
41232979Galk1-ps1galactokinase 1, pseudogene 13138465217138468099Rat
41233677LOC120101936U6 spliceosomal RNA3135194918135195023Rat
40971044Cct8-ps4chaperonin containing Tcp1, subunit 8 (theta), pseudogene 43121667549121680078Rat
40996556LOC120101755uncharacterized LOC1201017553140454710140466096Rat
41011546LOC120101720uncharacterized LOC1201017203131084274131088280Rat
41341385LOC120101685uncharacterized LOC1201016853124143576124157473Rat
40953006LOC120102047small nucleolar RNA SNORA173136056090136056221Rat
41012882LOC120101723uncharacterized LOC1201017233132778720132796217Rat
40954948LOC120101725uncharacterized LOC1201017253135364107135467677Rat
41014374LOC120102102small nucleolar RNA U1093141335435141335551Rat
40955793LOC120101970U6 spliceosomal RNA3123329939123330048Rat
40999887LOC120101919uncharacterized LOC1201019193122153798122157189Rat
41000018LOC120101750uncharacterized LOC1201017503140136868140139247Rat
40929690LOC120101465cystatin-S-like3137241240137245990Rat
40981890LOC120101680uncharacterized LOC1201016803123216504123223340Rat
40931098LOC120101459uncharacterized LOC1201014593126395727126396666Rat
40982723LOC120101754uncharacterized LOC1201017543140478638140482705Rat
41003609LOC120102008small nucleolar RNA SNORA36 family3131699975131700105Rat
40933111LOC120102122U4 spliceosomal RNA3133102492133102574Rat
40984840Dnajb6-ps9DnaJ heat shock protein family (Hsp40) member B6, pseudogene 93138437900138439108Rat
40985114Ppp3r1-ps1protein phosphatase 3, regulatory subunit B, alpha, pseudogene 13138272487138276528Rat
40938039LOC120101740uncharacterized LOC1201017403138841590138844057Rat
40962928LOC120101724uncharacterized LOC1201017243134254342134258047Rat
41009016Set-ps5Set nuclear proto-oncogene, pseudogene 53138285497138295912Rat
40939444LOC120101744uncharacterized LOC1201017443139175955139241065Rat
40965090LOC120101715uncharacterized LOC1201017153126818605126936623Rat
40966702LOC120101719uncharacterized LOC1201017193130524370130574657Rat
40944166Rnu6-722RNA, U6 small nuclear 7223139747792139747893Rat
41244214LOC120093153sperm motility kinase-like3138845484138846483Rat
41314027LOC120101766uncharacterized LOC1201017663145084166145084774Rat
41026694LOC120101703vomeromodulin-like3142804633142814240Rat
41027581LOC120101738uncharacterized LOC1201017383138491426138549109Rat
41052775LOC120101752uncharacterized LOC1201017523140374761140379288Rat
41054535Sec61g-ps7Sec61 translocon subunit gamma, pseudogene 73143357260143357815Rat
41256490LOC120101764uncharacterized LOC1201017643144894899144918133Rat
41055206Andpro-ps1androgen regulated protein, pseudogene 13136862196136879373Rat
41317548LOC120101705uncharacterized LOC1201017053125935521125965953Rat
41058592LOC120102054small nucleolar RNA SNORA173139854323139854450Rat
41223283LOC120101718uncharacterized LOC1201017183129991230130019643Rat
41033438LOC120101758uncharacterized LOC1201017583142076408142080824Rat
41060366LOC120101756uncharacterized LOC1201017563140515978140541284Rat
41300192LOC120101746uncharacterized LOC1201017463139381427139398817Rat
41337677LOC120101753uncharacterized LOC1201017533140405557140414036Rat
41035097Ankrd40-ps3ankyrin repeat domain 40, pseudogene 33138893278138895202Rat
41225295LOC120101692uncharacterized LOC1201016923124971230124981753Rat
41225358LOC120101726uncharacterized LOC1201017263135472358135477469Rat
41037735LOC120101770protein NDRG3-like3145548032145584913Rat
41227463LOC120102073small nucleolar RNA SNORA173132960051132960169Rat
41236200LOC120101717uncharacterized LOC1201017173129895901129961517Rat
41018009Rnu1-39RNA, U1 small nuclear 393136257921136258086Rat
41018323Ptges3-ps2prostaglandin E synthase 3, pseudogene 23139113097139116695Rat
41237402LOC120101761uncharacterized LOC1201017613142872649142878051Rat
41042908LOC120101963U6 spliceosomal RNA3141620611141620710Rat
41043178Gapdh-ps88Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 883129269998129271031Rat
41309114LOC120102109U2 spliceosomal RNA3143781974143782150Rat
41020731LOC120101677igE-binding protein-like3122794643122796663Rat
41044769Trnaa-agc28transfer RNA alanine (anticodon AGC) 283143536893143536974Rat
41046177Rnu6-897RNA, U6 small nuclear 8973121508617121508711Rat
41073926LOC120101729uncharacterized LOC1201017293138178349138187949Rat
41023085LOC120101687uncharacterized LOC1201016873124671242124688918Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10161D3Wox171563136723002136723158Ratregion
10416D1Mgh181133137433117137433250Ratregion
11117D3Wox223122771586122771798Ratregion
11117D3Wox223122771586122771840Ratregion
11119D3Wox211673123321035123321202Ratregion
33808D3Mit41713130193298130193489Ratregion
33810D3Mit22453141339013141339236Ratregion
33927D3Mit31553135181358135181505Ratregion
34407D3Mgh41493136078306136078454Ratregion
11327D3M2Mit281203124122549124122669Ratregion
36223D3Rat1471593141616923141617091Ratregion
36380D3Mgh291253143087759143087884Ratregion
37204D3Rat782493144938577144938823Ratregion
35210D3Rat161743121848692121848863Ratregion
35333D3Rat141583126854753126854898Ratregion
35378D3Rat611333145925360145925493Ratregion
35378D3Rat611333145925360145925493Ratregion
35493D3Rat131533133466517133466663Ratregion
36826D3Rat121303127162703127162893Ratregion
36882D3Rat72623143636175143636438Ratregion
37716D3Rat1121833123217730123217913Ratregion
37836D3Rat852203133042352133042572Ratregion
36584D3Rat61663145956084145956249Ratregion
36717D3Rat171603121056165121056321Ratregion
36797D3Rat111193131243544131243657Ratregion
35621D3Rat91763131440813131441003Ratregion
35689D3Rat81863131212042131212228Ratregion
35743D3Rat151233125150072125150194Ratregion
35779D3Rat101323134194043134194177Ratregion
39590D3Rat1552443124224041124224285Ratregion
39612D3Rat1461453142046174142046321Ratregion
38096D3Rat1491193134178483134178607Ratregion
38100D3Rat1062333128078584128078816Ratregion
40492D3Rat2171743133293002133293184Ratregion
40556D3Rat1571753123067607123067760Ratregion
40268D3Rat1541483124286544124286690Ratregion
38946D3Rat1291393127829560127829719Ratregion
39382D3Rat1561103123513284123513386Ratregion
39486D3Rat2002323121537120121537358Ratregion
42130D3Arb222093135287266135287475Ratregion
42132D3Arb232693135287261135287530Ratregion
42302D3Rat2452483137470587137470833Ratregion
41228D3Rat1521753133483147133483320Ratregion
41364D3Rat1531743130487653130487842Ratregion
42666D3Rat2552413122980747122980996Ratregion
42667D3Rat2542323123471156123471394Ratregion
42668D3Rat2182013125293539125293758Ratregion
42669D3Rat2532293128959229128959477Ratregion
42670D3Rat2522273126141099126141331Ratregion
42671D3Rat2512313127062295127062520Ratregion
42672D3Rat2502003126179802126179969Ratregion
42673D3Rat2492263134230587134230817Ratregion
42676D3Rat2482013128835257128835451Ratregion
42677D3Rat2462463134279173134279418Ratregion
42678D3Rat2142433141029271141029496Ratregion
40772D3Rat1581483122457858122458012Ratregion
41020D3Rat1501173133961786133961903Ratregion
41032D3Rat1512223129926804129927044Ratregion
41872D3Rat2371073144655696144655803Ratregion
44343D7Got1321493139923892139924930Ratregion
43690D3Got791243122867050122867174Ratregion
43691D3Wox20903124122556124122668Ratregion
43692D3Got872073125076800125077007Ratregion
43694D3Got862003125076900125077100Ratregion
43695D3Got821903124476148124476340Ratregion
43696D3Got831983124476139124476339Ratregion
43697D3Got931903124918556124918746Ratregion
43699D3Got901723127091006127091175Ratregion
43702D3Got962013128078672128078873Ratregion
43704D3Got881333126989604126989737Ratregion
43706D3Got951593128344077128344236Ratregion
43707D3Got922223126841239126841461Ratregion
43709D3Got1031723140658533140658705Ratregion
43710D3Got1001323140465482140465614Ratregion
43711D3Got1011573142019153142019310Ratregion
43712D3Got1052363140986979140987215Ratregion
43714D3Got1021343140069424140069560Ratregion
43715D3Got1061333141282112141282245Ratregion
43716D3Got1821983141053656141053856Ratregion
43718D3Got1111263144006941144007067Ratregion
43720D3Got1101583144294166144294324Ratregion
43721D3Got1171613144983277144983438Ratregion
60400D3Got802393123747302123747543Ratregion
60401D3Got851663124846922124847088Ratregion
60402D3Got973003133006585133006885Ratregion
60403D3Got982643135187696135188105Ratregion
60403D3Got982643135187841135188105Ratregion
60404D3Got991893133271252133271441Ratregion
60361D3Got1081413144133147144133285Ratregion
60362D3Got1091863143282142143282328Ratregion
60363D3Got1121753144050848144051023Ratregion
60364D3Got1141313143609237143609368Ratregion
59967D3Arb2191323124651036124651168Ratregion
66435D3Mco102913122411707122412032Ratregion
66453D3Mco191893145871677145871858Ratregion
66487D3Mco282653132537599132537850Ratregion
66600D3Mco82673131540955131541227Ratregion
66602D3Mco92423139762410139762648Ratregion
67312D3Kyo31123124122556124122668Ratregion
67758D3Uwm11893145864084145864245Ratregion
1631078D3Got2402173132954388132954605Ratregion
1632226D3Wox183136445224136445410Ratregion
1632226D3Wox183136462228136462415Ratregion
1632226D3Wox183136722906136723130Ratregion
1628444D3Got2651473124875965124876112Ratregion
1628775D3Got2362963126959541126959828Ratregion
1628800D3Wox191723136720274136720446Ratregion
1641489D3Wox291713136720277136720448Ratregion
1636877D3Wox372303142491933142492163Ratregion
1633670D3Got2581423144903148144903287Ratregion
1634567D3Got2791293138568803138568932Ratregion
1634567D3Got2791293138568803138568932Ratregion
7206392UniSTS:2343492693139961593139961863Ratregion
7205994Bcl2l15583141302496141302847Ratregion
7206008Insm1813133641656133641737Ratregion
7205850UniSTS:469811923145346299145346391Ratregion
7205852Tgif23593145346561145346920Ratregion
7192226D3Mgh41493136078305136078454Ratregion
7192156Mapre11483142245528142245676Ratregion
7206290Nkx2-216803134620399134622079Ratregion
7206070Sms5013142944211142944712Ratregion
5038616RH1268362003129975215129975415Ratregion
5035911PMC305683P16683141211352141212020Ratregion
5038814RH1273482163145431188145431404Ratregion
5038814RH1273482163145470156145470370Ratregion
5038814RH1273482163145509148145509364Ratregion
5038814RH1273482163145548184145548400Ratregion
5038814RH1273482163145587657145587873Ratregion
5038862RH1273752023136337031136337233Ratregion
5038972RH1274391243143370397143370521Ratregion
7206608Insm14563133641920133642376Ratregion
7206630Slc24a39503133049999133050949Ratregion
7206642Tgif210513145347369145348420Ratregion
7206682UniSTS:5475101373135471502135471639Ratregion
5039266RH1276072013144048021144048222Ratregion
5039046RH1274812143135891993135892207Ratregion
5039110RH1275181893139658253139658442Ratregion
5039130RH1275291933127454805127454998Ratregion
5036777AU0491702093141569016141569225Ratregion
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Position Markers

Flank 1: (D3Rat17)
Rat AssemblyChrPosition (strand)Source
mRatBN7.23121,056,165 - 121,056,321 (+)MAPPER
Rnor_6.03126,575,595 - 126,575,750NCBI
Rnor_6.03127,023,842 - 127,023,997NCBI
Rnor_5.03133,062,559 - 133,062,714UniSTS
Rnor_5.03133,513,670 - 133,513,825UniSTS
RGSC_v3.43121,618,954 - 121,619,110RGD
RGSC_v3.43121,618,955 - 121,619,110UniSTS
RGSC_v3.13121,524,528 - 121,524,683RGD
Celera3119,839,022 - 119,839,177UniSTS
RH 3.4 Map31046.3UniSTS
RH 3.4 Map31046.3RGD
RH 2.0 Map3713.5RGD
SHRSP x BN Map358.5198RGD
FHH x ACI Map373.54RGD
Peak: (D3Rat11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.23131,243,544 - 131,243,657 (+)MAPPER
Rnor_6.03137,983,860 - 137,983,972NCBI
Rnor_5.03144,422,860 - 144,422,972UniSTS
RGSC_v3.43132,316,640 - 132,316,753RGD
RGSC_v3.43132,316,641 - 132,316,753UniSTS
RGSC_v3.13132,222,214 - 132,222,326RGD
Celera3130,141,621 - 130,141,733UniSTS
RH 3.4 Map31176.8UniSTS
RH 3.4 Map31176.8RGD
RH 2.0 Map3791.8RGD
SHRSP x BN Map364.1499RGD
FHH x ACI Map379.1899RGD
Flank 2: (D3Rat6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.23145,956,084 - 145,956,249 (+)MAPPER
Rnor_6.03153,412,455 - 153,412,619NCBI
Rnor_5.03158,307,259 - 158,307,423UniSTS
RGSC_v3.43147,990,566 - 147,990,731RGD
RGSC_v3.43147,990,567 - 147,990,731UniSTS
RGSC_v3.13147,896,437 - 147,896,729RGD
Celera3144,661,462 - 144,661,626UniSTS
SHRSP x BN Map370.9999RGD
SHRSP x BN Map370.9999UniSTS
FHH x ACI Map386.36RGD
Cytogenetic Map3q42UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)314489145121056321Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)314489145121056321Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)338192233133483320Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)341874578155617519Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)341874578155617519Rat
1581503Cm58Cardiac mass QTL 582.70.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)343827364121056321Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)359242096157323038Rat
1300111Rf12Renal function QTL 123.78renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)361017749121056321Rat
12879848Bw181Body weght QTL 1810.015body mass (VT:0001259)body weight (CMO:0000012)370348525121056321Rat
2301414Kidm37Kidney mass QTL 370.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)370653097121056321Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)378196190146592722Rat
631649Bp123Blood pressure QTL 1233.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)389772419134772419Rat
8694437Bw167Body weight QTL 16722.460.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)391797474136797474Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)394856903159898684Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)395735366140735366Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)397084464142084464Rat
2293087Iddm27Insulin dependent diabetes mellitus QTL 272.68blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)397551417147415807Rat
2312659Slep7Serum leptin concentration QTL 70.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)398535255168026850Rat
2312670Bw94Body weight QTL 940.01inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)398535255168026850Rat
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
619618Rf3Renal disease susceptibility QTL 36.50.001urine albumin amount (VT:0002871)urine albumin excretion rate to body weight ratio (CMO:0001270)3107693393152693393Rat
1331758Bp207Blood pressure QTL 2072.848arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3112287552135181505Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3112681431157681431Rat
1358204Insglur1Insulin/glucose ratio QTL 13.8blood glucose amount (VT:0000188)serum insulin level (CMO:0000358)3115638168135181505Rat
1358204Insglur1Insulin/glucose ratio QTL 13.8blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)3115638168135181505Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3118839124163839124Rat
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3121056165145956249Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3121056165157309487Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3122438700167438700Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3124122556169034231Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3127162703168026850Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3130193298161695983Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3130656562169034231Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3131635904169034231Rat
2298477Eau4Experimental allergic uveoretinitis QTL 40.0011uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)3137398739169034231Rat
8552952Pigfal13Plasma insulin-like growth factor 1 level QTL 13blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)3138799500169034231Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3140069424146976080Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3141074471169034231Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141339013162184794Rat
61335Bp20Blood pressure QTL 203arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3141339236155617360Rat
2317883Alcrsp26Alcohol response QTL 261.80.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)3145526770169034231Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3145925360166177555Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3145925360166177555Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3145925360166177555Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3145925360166177555Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3145925360166177555Rat
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3145925360166177555Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3145925360166177555Rat
1300113Bp176Blood pressure QTL 1763.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3145956084157309487Rat
1598854Memor10Memory QTL 102exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)3145956084161299569Rat
8552791Vie2Viral induced encephalitis QTL 24.1brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)3145956084169034231Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Rf11

RGD Curation Notes
Note Type Note Reference
qtl_general significant linkage also found to mean arterial blood pressure time series calculation (SCOR40, LOD=3.16) 727992
qtl_general additional information, including phenotype and mapping information, can be found at Genomic Map of Cardiovascular Phenotypes 727992
qtl_general significant linkage also found to renal blood flow after norepinephrine dose 3 (SCOR54, LOD=3.12) 727992
qtl_general change in renal blood flow calculated after norepinephrine dose 2 administration (SCOR78) 727992