Rf23 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Rf23 (Renal function QTL 23) Rattus norvegicus

Symbol: Rf23
Name: Renal function QTL 23
RGD ID: 1300144
Previously known as: Specialized Center of Research QTL 64; SCOR64
Trait: renal blood flow trait   (VT:2000006)    
Measurement Type: absolute change in renal vascular resistance   (CMO:0001900)    
LOD Score: 3.61
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81544,806,773 - 104,695,021RGD_MAPPER_PIPELINE
mRatBN7.21540,631,268 - 98,288,169RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01543,097,470 - 106,550,657RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01548,493,430 - 109,944,957RGDRnor5.0
RGSC_v3.41545,870,097 - 106,177,917RGDRGSC3.4
RGSC_v3.11545,885,878 - 106,193,697RGD
Cross Type: Not Available
Strains Crossed: BN/SsNHsd SS/JrHsdMcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/SsNHsd  (IEA)
SS/JrHsdMcwi  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genomic map of cardiovascular phenotypes of hypertension in female Dahl S rats. Moreno C, etal., Physiol Genomics 2003 Nov 11;15(3):243-57. Epub 2003 Oct 07.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2055Adra1aadrenoceptor alpha 1A154083012540935902Rat
2517Dpysl2dihydropyrimidinase-like 2154100555141111724Rat
1307266Pnma2PNMA family member 2154111194241119649Rat
621354Bnip3lBCL2 interacting protein 3 like154117459441197730Rat
620919Ppp2r2aprotein phosphatase 2, regulatory subunit B, alpha154120465941263924Rat
7527777LOC102555410uncharacterized LOC102555410154127338141280579Rat
1310805Ebf2EBF transcription factor 2154143550941634403Rat
41152583LOC120097021uncharacterized LOC120097021154169126041695519Rat
41008930LOC120097231small nucleolar RNA SNORA17154178514241785272Rat
1566135Rpl36-ps13ribosomal protein L36, pseudogene154186037541860709Rat
1311003Cdca2cell division cycle associated 2154189594641942226Rat
1312010Kctd9potassium channel tetramerization domain containing 9154194216541969862Rat
2720Gnrh1gonadotropin releasing hormone 1154197248241976690Rat
9098115LOC103693653uncharacterized LOC103693653154197291341976552Rat
1306872Dock5dedicator of cytokinesis 5154197972842158733Rat
41400303Rps16-ps5ribosomal protein S16, pseudogene 5154228190142282434Rat
621458Neflneurofilament light chain154230192042305793Rat
2323627Slc25a3-ps1solute carrier family 25 member 3, pseudogene 1154234483742346266Rat
3160Nefmneurofilament medium chain154236044942365753Rat
2325104Brcc3-ps4BRCA1/BRCA2-containing complex, subunit 3, pseudogene 4154257266442573505Rat
40973991LOC120097024uncharacterized LOC120097024154266206242704954Rat
62032Adam7ADAM metallopeptidase domain 7154283379642882201Rat
1309861Adamdec1ADAM-like, decysin 1154290062942921684Rat
7726377LOC102550654disintegrin and metalloproteinase domain-containing protein 28-like154294109842996816Rat
7555795Ssxbl1SSX family member B like 1154300099143049036Rat
2323508Ube2v1l2ubiquitin conjugating enzyme E2 V1 like 2154313405843134595Rat
6493460Wdr82-ps4WD repeat domain 82, pseudogene 4154336423643365095Rat
1586394Wdr82-ps3WD repeat domain 82, pseudogene 3154341167343412761Rat
1593232Rrs1-ps13ribosome biogenesis regulator 1 homolog, pseudogene 13154372661343728908Rat
1593231Septin2-ps1septin 2, pseudogene 1154376092743762362Rat
727820Adam28ADAM metallopeptidase domain 28154377446343840726Rat
7707332Rpl7a-ps3ribosomal protein L7a, pseudogene 3154407194944072745Rat
621776Stc1stanniocalcin 1154429959144311695Rat
1593230Rps17-ps4ribosomal protein S17, pseudogene 4154431935144319786Rat
1306149Nkx2-6NK2 homeobox 6154444315144447248Rat
1305369Nkx3-1NK3 homeobox 1154447385144476443Rat
41166600LOC120097025uncharacterized LOC120097025154450623444512838Rat
1359361Slc25a37solute carrier family 25 member 37154453428044576697Rat
1590801Set-ps13Set nuclear proto-oncogene, pseudogene 13154457595444604828Rat
1566115Synbsyncytin b154458081844588417Rat
1309511Entpd4ectonucleoside triphosphate diphosphohydrolase 4154463087844658654Rat
1308435Loxl2lysyl oxidase-like 2154468344944773067Rat
1311790R3hcc1R3H domain and coiled-coil containing 1154477455244781864Rat
1308779Chmp7charged multivesicular body protein 7154479098344806216Rat
1308041Tnfrsf10bTNF receptor superfamily member 10b154484038644868318Rat
1309924Rhobtb2Rho-related BTB domain containing 2154486825144888436Rat
9259039LOC103693695uncharacterized LOC103693695154489190444896522Rat
7630497LOC102550955uncharacterized LOC102550955154490440444907623Rat
1593295Pebp4phosphatidylethanolamine binding protein 4154492094645134188Rat
2545Egr3early growth response 3154515033545156052Rat
1308253Bin3bridging integrator 3154517372545212607Rat
1309922Ccar2cell cycle and apoptosis regulator 2154521279745228001Rat
1308117C15h8orf58similar to human chromosome 8 open reading frame 58154522861545235274Rat
1359203Pdlim2PDZ and LIM domain 2154523542145250187Rat
628900Sorbs3sorbin and SH3 domain containing 3154525292145284758Rat
621616Ppp3ccprotein phosphatase 3 catalytic subunit gamma154528991745362012Rat
1307026Slc39a14solute carrier family 39 member 14154537680645423549Rat
1306964Piwil2piwi-like RNA-mediated gene silencing 2154543140245498034Rat
40950856LOC120097212small nucleolar RNA SNORA70154549140645491496Rat
41262530Trnap-agg23transfer RNA proline (anticodon AGG) 23154550234045502412Rat
1311816Polr3dRNA polymerase III subunit D154551158745516256Rat
2325539Mir320amicroRNA 320a154551639245516473Rat
41291261LOC120097030uncharacterized LOC120097030154553294545534370Rat
1305790Phyhipphytanoyl-CoA 2-hydroxylase interacting protein154553397445545223Rat
620739Bmp1bone morphogenetic protein 1154555160345595862Rat
3666Sftpcsurfactant protein C154559656545599615Rat
1311079Lgi3leucine-rich repeat LGI family, member 3154560561145612739Rat
1306561Reep4receptor accessory protein 4154562031745623524Rat
620634HrHR, lysine demethylase and nuclear receptor corepressor154562683545646313Rat
1311802Nudt18nudix hydrolase 18154565059745653985Rat
1308870Fhip2bFHF complex subunit HOOK interacting protein 2B154565664145674603Rat
1311419Dmtndematin actin binding protein154567797445702261Rat
2607Fgf17fibroblast growth factor 17154571149845717622Rat
727816Npm2nucleophosmin/nucleoplasmin 2154572228245729336Rat
1310928Xpo7exportin 7154574205345828050Rat
1310966Dok2docking protein 2154582698445841409Rat
61809Gfra2GDNF family receptor alpha 2154594184146033715Rat
41365565LOC12009699160S ribosomal protein L31-like154609440746097323Rat
1592172Dpm3-ps1dolichyl-phosphate mannosyltransferase polypeptide 3, pseudogene 1154620271946203082Rat
41099915LOC120097031uncharacterized LOC120097031154632591046346326Rat
9310814LOC103693704NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial pseudogene154653606246536379Rat
7571001LOC102552533uncharacterized LOC102552533154658393146598119Rat
41005955LOC120097229small nucleolar RNA SNORA48154722891747229062Rat
7556177LOC102554416uncharacterized LOC102554416154729087447293379Rat
7689627LOC102554611uncharacterized LOC102554611154756270447588473Rat
1304736Fndc3afibronectin type III domain containing 3a154768990947867354Rat
9466191Chchd2l2-ps5coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 2, pseudogene 5154787600447896992Rat
41091694LOC120097033uncharacterized LOC120097033154794046147943746Rat
41214497LOC120097034uncharacterized LOC120097034154798377547986574Rat
1592074Slc25a5-ps4solute carrier family 25 member 5, pseudogene 4154809047548091756Rat
619797Cysltr2cysteinyl leukotriene receptor 2154818947648228750Rat
41176152LOC120097279U2 spliceosomal RNA154821779648217998Rat
41014666Mrpl40-ps2mitochondrial ribosomal protein L40, pseudogene 2154824974248251960Rat
735048Rcbtb2RCC1 and BTB domain containing protein 2154831980948364441Rat
41274953LOC120097036uncharacterized LOC120097036154832664748330592Rat
3540Rb1RB transcriptional corepressor 1154837129548502473Rat
1595950Lpar6lysophosphatidic acid receptor 6154841654848418357Rat
620727Itm2bintegral membrane protein 2B154854599848568904Rat
2322692Tyw5-ps1tRNA-yW synthesizing protein 5, pseudogene 1154864156848675592Rat
1306671Med4mediator complex subunit 4154869654248706818Rat
1308292Nudt15nudix hydrolase 15154870777648713847Rat
11396216Trnae-uuc6transfer RNA glutamic acid (anticodon UUC) 6154875155848751629Rat
1309397Sucla2succinate-CoA ligase ADP-forming subunit beta154875235648805495Rat
41332447LOC120097289U4 spliceosomal RNA154880877648808965Rat
7688592LOC102547539uncharacterized LOC102547539154900298549005197Rat
41019314LOC120097037uncharacterized LOC120097037154955623949571826Rat
41336942LOC120097038uncharacterized LOC120097038154963351949645203Rat
41188357Rpl13a-ps7ribosomal protein L13A, pseudogene 7154975736749758024Rat
7599070LOC102546539uncharacterized LOC102546539154983625449851944Rat
61800Htr2a5-hydroxytryptamine receptor 2A154995003550022188Rat
1592114Esdesterase D155004363450063134Rat
1595678Lrch1leucine rich repeats and calponin homology domain containing 1155007060550249724Rat
11356954LOC108352942uncharacterized LOC108352942155033048850348165Rat
1304929Rubcnlrubicon like autophagy enhancer155033245850377494Rat
1559507Lrrc63leucine rich repeat containing 63155040019950437321Rat
1308288Lcp1lymphocyte cytosolic protein 1155044330050544682Rat
41247556LOC120097039uncharacterized LOC120097039155044361550464475Rat
1310303Esco2-ps2establishment of cohesion 1 homolog 2 (S. cerevisiae), pseudogene 2155045229150455762Rat
71035Cpb2carboxypeptidase B2155055772250606569Rat
41365366Trmt10a-ps1tRNA methyltransferase 10A, pseudogene 1155055783250569751Rat
41046054LOC120097303U6 spliceosomal RNA155058497450585080Rat
1307729Zc3h13zinc finger CCCH type containing 13155060733550671802Rat
1592168Siah3siah E3 ubiquitin protein ligase family member 3155077083950838213Rat
41398796LOC120097040uncharacterized LOC120097040155082147550844771Rat
1561044Cby2chibby family member 2155090943551004449Rat
6491099Erich6bglutamate-rich 6B155097906651014394Rat
1592167Gabarapl2-ps2GABA type A receptor associated protein like 2, pseudogene 2155098554950986428Rat
1304555Cog3component of oligomeric golgi complex 3155102080851071288Rat
1359702Slc25a30solute carrier family 25, member 30155107699851099613Rat
7699265LOC102552389uncharacterized LOC102552389155114431451149510Rat
621623Tpt1tumor protein, translationally-controlled 1155115672851159629Rat
41070333Snora31small nucleolar RNA, H/ACA box 31155115922051159349Rat
7695025LOC102549099uncharacterized LOC102549099155117522651192638Rat
40992298LOC12009704340S ribosomal protein S29-like155119379451199210Rat
620772Gtf2f2general transcription factor IIF subunit 2155120602751327166Rat
1594637Kctd4potassium channel tetramerization domain containing 4155126366451278030Rat
40942556LOC120097218small nucleolar RNA SNORA5155128408451284223Rat
40964313LOC120097044uncharacterized LOC120097044155135805951361504Rat
9082307LOC103690313uncharacterized LOC103690313155135980051362026Rat
1307254Gpalpp1GPALPP motifs containing 1155141188351429435Rat
41169285Ran-ps6RAN, member RAS oncogene family, pseudogene 6155141578451416614Rat
1359440Nufip1nuclear FMR1 interacting protein 1155142951851460308Rat
9173655Hmga1-ps3high mobility group AT-hook 1, pseudogene 3155146046051463125Rat
11450795Trnae-uuc7transfer RNA glutamic acid (anticodon UUC) 7155148538351485454Rat
41109740LOC120097047uncharacterized LOC120097047155149876151512101Rat
11484738LOC108352943uncharacterized LOC108352943155153676051563422Rat
41059337LOC120097108uncharacterized LOC120097108155154586951566802Rat
41148120LOC120097109uncharacterized LOC120097109155156630551571272Rat
41309137Rps29-ps6ribosomal protein S29, pseudogene 6155167644851680099Rat
3850Tsc22d1TSC22 domain family, member 1155175048951850958Rat
41059573LOC120097112uncharacterized LOC120097112155180841851822530Rat
1566076Serp2stress-associated endoplasmic reticulum protein family member 2155187988251903958Rat
41348002LOC120097114uncharacterized LOC120097114155190418951909465Rat
7631267LOC102556319uncharacterized LOC102556319155191597951929359Rat
9094045LOC103693719uncharacterized LOC103693719155201892052027569Rat
11507603LOC108352946uncharacterized LOC108352946155210784852112526Rat
7700048LOC102546462uncharacterized LOC102546462155217781152273499Rat
1310185Lacc1laccase domain containing 1155239026752407630Rat
2321506Ccdc122coiled-coil domain containing 122155240771752470163Rat
41029888LOC120097048uncharacterized LOC120097048155249305052501340Rat
1306118Enox1ecto-NOX disulfide-thiol exchanger 1155251783353079752Rat
41087576Rps15-ps5ribosomal protein S15, pseudogene 5155262460752625235Rat
40986166Trnap-ugg7transfer RNA proline (anticodon UGG) 7155272918152729261Rat
41101550LOC120097117uncharacterized LOC120097117155295910952960850Rat
1307154Dnajc15DnaJ heat shock protein family (Hsp40) member C15155318206053249675Rat
1563207Epsti1epithelial stromal interaction 1155328396453382192Rat
1560137Fam216bfamily with sequence similarity 216, member B155346949553482385Rat
620784Tnfsf11TNF superfamily member 11155367385053705325Rat
7661800LOC102549816uncharacterized LOC102549816155386129753864972Rat
2079Akap11A-kinase anchoring protein 11155391163553956138Rat
41164845LOC120097049uncharacterized LOC120097049155395618653960792Rat
1561955Dgkhdiacylglycerol kinase, eta155398107954150470Rat
11447237LOC108353040uncharacterized LOC108353040155423194754235599Rat
1308772Vwa8von Willebrand factor A domain containing 8155425270354576871Rat
41277989LOC120097120uncharacterized LOC120097120155426877054269387Rat
41000723LOC120097121uncharacterized LOC120097121155428709854296675Rat
41003131Hars1-ps1histidyl-tRNA synthetase 1, pseudogene 1155440661954416048Rat
619721Rgccregulator of cell cycle155466248354675320Rat
6501536Glul-ps1glutamate-ammonia ligase, pseudogene 1155470241154704851Rat
1584324Naa16N(alpha)-acetyltransferase 16, NatA auxiliary subunit155471162054770915Rat
41033512LOC120097256U2 spliceosomal RNA155477002654770188Rat
1584329Mtrf1mitochondrial translation release factor 1155477688554804699Rat
6501695Kbtbd7kelch repeat and BTB domain containing 7155480687854811457Rat
1584320Rps24-ps14ribosomal protein S24, pseudogene 14155481614854816642Rat
6501416Rpl15-ps1ribosomal protein L15, pseudogene 1155482252954823866Rat
1305086Kbtbd6kelch repeat and BTB domain containing 6155484828554850042Rat
620033Wbp4WW domain binding protein 4155486270054890668Rat
620697Elf1E74 like ETS transcription factor 1155489064454986721Rat
11379973Trnae-uuc8transfer RNA glutamic acid (anticodon UUC) 8155489080954890880Rat
1307550Sugt1SGT1 homolog, MIS12 kinetochore complex assembly cochaperone155499141955032244Rat
620176Cnmdchondromodulin155504154855066297Rat
2325470Mir759microRNA 759155514202255142118Rat
69350Pcdh8protocadherin 8155519847055203039Rat
11434381LOC108352947uncharacterized LOC108352947155520341055274301Rat
1311708Olfm4olfactomedin 4155538510055429687Rat
1564564Rpl14l1ribosomal protein L14 like 1155552033255531879Rat
9685073Mir1297microRNA 1297155684843056848503Rat
1592156Sord-ps6sorbitol dehydrogenase, pseudogene 6155712815857129211Rat
2320681LOC10036118040S ribosomal protein S17-like155717842557179006Rat
11436659LOC108353006ATP synthase subunit d, mitochondrial pseudogene155721053057211782Rat
7672387LOC102554138uncharacterized LOC102554138155806456458084413Rat
1597679Calm2-ps2calmodulin 2, pseudogene 2155811060058111718Rat
9466192Uqcrbl2ubiquinol-cytochrome c reductase binding protein like 2155875934358759666Rat
41086981LOC120097308U6 spliceosomal RNA155884001758840119Rat
40958512LOC120097052uncharacterized LOC120097052155889457659015688Rat
41262856LOC120097242small nucleolar RNA SNORA17155906759759067728Rat
40975150LOC120097286small nucleolar RNA U3155954783759548029Rat
1304753Pcdh17protocadherin 17156022208860316172Rat
11379167LOC108352949uncharacterized LOC108352949156023615860255653Rat
41315464LOC120097053uncharacterized LOC120097053156138063461394655Rat
40989554LOC120097194U6 spliceosomal RNA156219208462192173Rat
1593287Diaph3diaphanous-related formin 3156254337563013060Rat
41002785Trnav-aac40transfer RNA valine (anticodon AAC) 40156270754162707622Rat
41189376LOC120097230small nucleolar RNA SNORA48156305046163050601Rat
41127910Atp5mj-ps2ATP synthase membrane subunit j, pseudogene 2156320208063202497Rat
2320163Mfap1a-ps2microfibrillar-associated protein 1A, pseudogene 2156327575063276346Rat
1310126Tdrd3tudor domain containing 3156334053163497208Rat
41326155LOC120097228small nucleolar RNA SNORA48156366873363668876Rat
41026458LOC120097310U6 spliceosomal RNA156374503163745137Rat
41096054LOC120093128uncharacterized LOC120093128156393710263941299Rat
6496491Rpsa-ps1ribosomal protein SA, pseudogene 1156394891363949900Rat
41381972Tubal-ps1tubulin, alpha like, pseudogene 1156407140364072451Rat
1592113Pkm-ps18pyruvate kinase M1/2, pseudogene 18156431995864321551Rat
1306297Pcdh20protocadherin 20156442553464431790Rat
2320118Mtfr2-ps1mitochondrial fission regulator 2, pseudogene 1156542691565427910Rat
41365783LOC120097247small nucleolar RNA SNORA17156575091865751049Rat
1592151Phgdh-ps4phosphoglycerate dehydrogenase, pseudogene 4156580583465807366Rat
40959529LOC120097187uncharacterized LOC120097187156649888566520540Rat
41226654LOC120097232small nucleolar RNA SNORA17156651097266511103Rat
7552264LOC102547864uncharacterized LOC102547864156655133366593853Rat
41325790LOC120097252small nucleolar RNA SNORA17156655180666551936Rat
40983884LOC120097054uncharacterized LOC120097054156665172066661831Rat
7554821Envl-ps1MLV-related proviral Env polyprotein-like, pseudogene 1156673717466757250Rat
7651565LOC102546653uncharacterized LOC102546653156686439666876742Rat
41079966LOC120097254small nucleolar RNA SNORA17156728878167288910Rat
2319690Cdk4-ps1cyclin-dependent kinase 4, pseudogene 1156737104667371603Rat
1595677Nono-ps9non-POU domain containing, octamer-binding, pseudogene 9156738764167435806Rat
41018907LOC120097188uncharacterized LOC120097188156747758567491791Rat
1590791Rplp2l2ribosomal protein lateral stalk subunit P2 like 2156763836567638804Rat
40995928LOC120097056uncharacterized LOC120097056156786285767953489Rat
41023740LOC120097057uncharacterized LOC120097057156848083468606048Rat
41287184LOC120097257small nucleolar RNA SNORA17156867010768670234Rat
41204718LOC120097281U2 spliceosomal RNA156877186068772017Rat
1306348Pcdh9protocadherin 9156934010870237531Rat
41027949LOC120097302U1 spliceosomal RNA156946362569463786Rat
41051620LOC120097140uncharacterized LOC120097140156950797869538198Rat
1595676Vdac1-ps13voltage-dependent anion channel 1, pseudogene 13157047334670479101Rat
41023963Snrk-ps1SNF related kinase, pseudogene 1157078688370789325Rat
41251075LOC120097271small nucleolar RNA SNORA17157083639770836536Rat
11410099LOC108353042uncharacterized LOC108353042157086763970872983Rat
1592146Ngrn-ps3neugrin, neurite outgrowth associated, pseudogene 3157145020371453611Rat
41054013LOC120097265small nucleolar RNA SNORA17157166663371666721Rat
41121265LOC120097225small nucleolar RNA SNORA2/SNORA34 family157176224671762373Rat
1592145Sinhcaf-ps1SIN3-HDAC complex associated factor, pseudogene 1157231631972318425Rat
9417610LOC103693758uncharacterized LOC103693758157231848772385670Rat
1306441Golga6l9golgin A6 family like 9157246415772468708Rat
7607858Afg3l1-ps1AFG3 (ATPase family gene 3)-like 1, pseudogene 1157251057272511658Rat
2321672Akip1-ps1A-kinase interacting protein 1, pseudogene 1157257613772579688Rat
1307452Klhl1kelch-like family member 1157269819173142726Rat
41261712LOC120097292U6 spliceosomal RNA157300867373008779Rat
2321527LOC100360731SNRPN upstream reading frame protein-like157319322273193407Rat
1592111Snrpnl2small nuclear ribonucleoprotein polypeptide N like 2157319364773194285Rat
9409882Matr3-ps2matrin 3, pseudogene 2157388290973886465Rat
1559682Ppial4gpeptidylprolyl isomerase A like 4G157401562874016215Rat
41121747LOC120097259small nucleolar RNA SNORA17157404462274044753Rat
1559579Ski-ps1Ski proto-oncogene, pseudogene 1157416494974169032Rat
727855Setl1SET-like protein 1157451290974513767Rat
1592073Dach1dachshund family transcription factor 1157452812274909811Rat
41336497Hmgn4-ps4high mobility group nucleosomal binding domain 4, pseudogene 4157462079774621379Rat
41377666Eif1-ps4eukaryotic translation initiation factor 1, pseudogene 4157486420674864707Rat
9459085LOC103693764uncharacterized LOC103693764157490991974915756Rat
40948418LOC120097190uncharacterized LOC120097190157495382274967542Rat
1560069Rpl27l4ribosomal protein L27 like 4157501018575011443Rat
1593229Eef1g-ps9eukaryotic translation elongation factor 1 gamma, pseudogene 9157509038375091676Rat
1592142Pes1-ps6pescadillo ribosomal biogenesis factor 1, pseudogene 6157532363475325610Rat
41030389LOC120097059uncharacterized LOC120097059157557001275574783Rat
1592140Mzt1mitotic spindle organizing protein 1157578728175797589Rat
1309522Borabora, aurora kinase A activator157579762475835599Rat
1304646Dis3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease157582004075850450Rat
2320932Spic-ps2Spi-C transcription factor, pseudogene 2157582978175831885Rat
1305077Pibf1progesterone immunomodulatory binding factor 1157585038976019711Rat
621446Klf5KLF transcription factor 5157606032076079445Rat
41254968LOC120097293U6 spliceosomal RNA157617301176173117Rat
2321007Serpinb6l-ps1serpin family B member 6 like, pseudogene 1157620740576208337Rat
7653320LOC102553927uncharacterized LOC102553927157627260276347580Rat
41354306LOC120097060uncharacterized LOC120097060157633918676341011Rat
41131207LOC120097267U2 spliceosomal RNA157653365876533849Rat
1309204Klf12KLF transcription factor 12157662877877062000Rat
9194298LOC103693766uncharacterized LOC103693766157664178776658502Rat
41085385LOC120097237small nucleolar RNA SNORA17157719048977190617Rat
1592139Rpl10a-ps3ribosomal protein L10A, pseudogene 3157731037477317398Rat
11498208Gapdhl3glyceraldehyde-3-phosphate dehydrogenase like 3157732467577471131Rat
11376868LOC108352955uncharacterized LOC108352955157749736177507913Rat
41363119LOC120097317U6 spliceosomal RNA157755266577552761Rat
2324281Selenok-ps4selenoprotein K, pseudogene 4157760905977609793Rat
41103500LOC120097287U4 spliceosomal RNA157766526677665430Rat
7679581LOC102555382uncharacterized LOC102555382157783604977841407Rat
1561609Tbc1d4TBC1 domain family, member 4157825603078434168Rat
2320734Uqcr10-ps1ubiquinol-cytochrome c reductase, complex III subunit X, pseudogene 1157845200178452433Rat
1560745Commd6COMM domain containing 6157846733378474382Rat
1561196Uchl3ubiquitin C-terminal hydrolase L3157848530478527355Rat
2323955Hax1-ps3HCLS1 associated protein X-1, pseudogene 3157853373578534635Rat
1302984Lmo7LIM domain 7157856699978769833Rat
1592138Got2-ps4glutamic-oxaloacetic transaminase 2, pseudogene 4157880882278810075Rat
1592110Eif3k-ps3eukaryotic translation initiation factor 3, subunit K, pseudogene 3157897398078974607Rat
41334176LOC120096897nucleoside diphosphate kinase B-like157898122778983942Rat
41361993LOC120097243small nucleolar RNA SNORA17157919355479193685Rat
11427239LOC108352956uncharacterized LOC108352956157932711779349197Rat
7577763LOC102556284uncharacterized LOC102556284157938945979463606Rat
41323194LOC120097062uncharacterized LOC120097062157943056379436640Rat
7632669LOC102546300uncharacterized LOC102546300157962671979635335Rat
7502353LOC102546379uncharacterized LOC102546379157967613879677687Rat
1309421Kctd12potassium channel tetramerization domain containing 12157980007879806017Rat
41227491LOC120097063uncharacterized LOC120097063157986770779873636Rat
1563454Acod1aconitate decarboxylase 1157987181979881101Rat
41255204LOC120097311U6 spliceosomal RNA157988191979882023Rat
11512925LOC108352966uncharacterized LOC108352966157988308779886189Rat
1306965Cln5CLN5, intracellular trafficking protein157989357379903438Rat
1305660Fbxl3F-box and leucine-rich repeat protein 3157990679579926678Rat
1312048Mycbp2MYC binding protein 2157993735480175432Rat
11487989LOC108352958cytochrome c, somatic pseudogene158009335680096114Rat
11410085LOC108352959uncharacterized LOC108352959158017539580194897Rat
7615992LOC102550034uncharacterized LOC102550034158025787180259789Rat
6500878LOC100909907uncharacterized LOC100909907158029136880301194Rat
40932818LOC120097171uncharacterized LOC120097171158030998280321557Rat
1305102Scelsciellin158033966180456546Rat
11361310LOC10835304560S ribosomal protein L29 pseudogene158047350280473993Rat
1308626Slain1SLAIN motif family, member 1158048281880542461Rat
2536Ednrbendothelin receptor type B158064083980672115Rat
7751243LOC102550182uncharacterized LOC102550182158067233480695485Rat
41022028LOC120097213small nucleolar RNA SNORD113/SNORD114 family158092711780927199Rat
7742907LOC102550315uncharacterized LOC102550315158097601180978272Rat
620074Pou4f1POU class 4 homeobox 1158125371481260057Rat
1564706Obi1ORC ubiquitin ligase 1158126941381308734Rat
41131751Rps18-ps8ribosomal protein S18, pseudogene 8158133040181331061Rat
41397731LOC120097316U6 spliceosomal RNA158137324981373355Rat
41029165LOC120097236small nucleolar RNA SNORA17158141609781416227Rat
7625858LOC102550655uncharacterized LOC102550655158168480081693102Rat
7666955LOC102550758uncharacterized LOC102550758158169622481700611Rat
1592109Asnsd1-ps1asparagine synthetase domain containing 1, pseudogene 1158173608781737952Rat
41148836LOC120097260small nucleolar RNA SNORA17158175643981756561Rat
11452914LOC108352963uncharacterized LOC108352963158179293381816324Rat
1308297Rbm26RNA binding motif protein 26158188478381964245Rat
41054335Rps11-ps8ribosomal protein S11, pseudogene 8158196856981971604Rat
41265548LOC120097069ATP synthase subunit g, mitochondrial-like158197168381973581Rat
41304945LOC120097070uncharacterized LOC120097070158201298382033164Rat
1309716Ndfip2Nedd4 family interacting protein 2158203236682087043Rat
41252070Trnap-agg90transfer RNA proline (anticodon AGG) 90158207672882076800Rat
2319992Rpl9-ps14ribosomal protein L9, pseudogene 14158220537682205981Rat
1592131Tceal8-ps1transcription elongation factor A like 8, pseudogene 1158232682782327275Rat
2323417Tra2b-ps6transformer 2 beta, pseudogene 6158249735882498715Rat
41035228LOC120096902uncharacterized LOC120096902158254978282551605Rat
1311472Spry2sprouty RTK signaling antagonist 2158269229182697408Rat
1565615Trim52tripartite motif-containing 52158288623782924611Rat
11402272LOC108353046protein transport protein Sec61 subunit gamma pseudogene158300188783002135Rat
1593227Ldha-ps2lactate dehydrogenase A, pseudogene 2158316576883173084Rat
11362115LOC108352964uncharacterized LOC108352964158319152783263790Rat
41159086LOC120097072uncharacterized LOC120097072158331386583364030Rat
41071279LOC120097270small nucleolar RNA SNORA17158355395883554033Rat
41029775LOC120097309U6 spliceosomal RNA158379931683799420Rat
11393005LOC108353047uncharacterized LOC108353047158433751184349331Rat
2323174Psmd8-ps2proteasome 26S subunit, non-ATPase 8, pseudogene 2158440878284410255Rat
41315848LOC120097074uncharacterized LOC120097074158454660484561746Rat
11489075Ervk-21l3endogenous retrovirus group K member 21 Env polyprotein-like 3158457319084581734Rat
2323017LOC100363428PCNA-associated factor-like158461031484612236Rat
9187193Ftl1l3ferritin light chain 1 like 3158483465984835093Rat
7590644Gapdh-ps105Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 105158509422085095216Rat
7536491Envl-ps8MLV-related proviral Env polyprotein-like, pseudogene 8158533635685338410Rat
41266332LOC120097278U2 spliceosomal RNA158537843785378563Rat
1308858Slitrk1SLIT and NTRK-like family, member 1158572325285727290Rat
2319521Apool-ps2apolipoprotein O-like, pseudogene 2158661594886617012Rat
41341524LOC120097269small nucleolar RNA SNORA17158675373586753851Rat
2323641Hnrnpa1-ps27heterogeneous nuclear ribonucleoprotein A1, pseudogene 27158737599687415696Rat
1306550Slitrk6SLIT and NTRK-like family, member 6158756350687570125Rat
2319369Wdr12-ps2WD repeat domain 12, pseudogene 2158769675987698451Rat
41022417Eif4a2-ps1eukaryotic translation initiation factor 4A2, pseudogene 1158795316987957830Rat
41380823St13-ps4ST13, Hsp70 interacting protein, pseudogene 4158820212788210457Rat
11455629LOC108352970uncharacterized LOC108352970158821293388334191Rat
41352702LOC120097077uncharacterized LOC120097077158858861588620218Rat
1559833Rpl5-ps10ribosomal protein L5, pseudogene 10158869968988700973Rat
41155398LOC120097076uncharacterized LOC120097076158880934788819173Rat
1310957Slitrk5SLIT and NTRK-like family, member 5158884812388858809Rat
41238556LOC120097315U6 spliceosomal RNA158919629889196401Rat
11513546LOC108352971uncharacterized LOC108352971158930528289472145Rat
41401429Trnaa-agc65transfer RNA alanine (anticodon AGC) 65158973361389733687Rat
1592125C16h19orf44-ps1similar to human chromosome 19 open reading frame 44, pseudogene 1158976300589764127Rat
41301829LOC120097284U2 spliceosomal RNA159003149590031677Rat
11467873Sec61gl3SEC61 translocon subunit gamma like 3159016860990169004Rat
2316379Vom1r-ps104vomeronasal 1 receptor pseudogene 104159064415390645034Rat
1592124Nsa2-ps8NSA2 ribosome biogenesis factor, pseudogene 8159091718590918020Rat
7613297LOC102547440uncharacterized LOC102547440159096273691056107Rat
41039265LOC120097078uncharacterized LOC120097078159105624391080155Rat
11501014LOC108352972uncharacterized LOC108352972159117279191220830Rat
41010480LOC120097305U6 spliceosomal RNA159119039091190496Rat
7551051LOC102547827uncharacterized LOC102547827159124609691274378Rat
1592123Rps11-ps11ribosomal protein S11, pseudogene 11159145907091459609Rat
11510082LOC10835301240S ribosomal protein S17 pseudogene159175115591760651Rat
41046097LOC120097080uncharacterized LOC120097080159200549392016267Rat
2325600Mir17microRNA 17159218062992180712Rat
2325396Mir18amicroRNA 18a159218076592180860Rat
2325462Mir19amicroRNA 19a159218091292180993Rat
2325401Mir20amicroRNA 20a159218108492181168Rat
2325433Mir19b1microRNA 19b-1159218121492181300Rat
2325390Mir92a1microRNA 92a-1159218133692181413Rat
1308835Gpc5glypican 5159220727593644054Rat
7644006LOC102548462uncharacterized LOC102548462159221026192241147Rat
7517571LOC10254836940S ribosomal protein S16-like159225976392260218Rat
41229299LOC120097209small nucleolar RNA SNORA70159341777793417911Rat
6488688LOC10091213260S ribosomal protein L10-like159341778893418406Rat
41338783LOC120097306U6 spliceosomal RNA159350534093505446Rat
1593308Gpc6glypican 6159403021895027883Rat
41007823LOC120097177uncharacterized LOC120097177159410394094117928Rat
9231101Tmem11-ps1transmembrane protein 11, pseudogene 1159444922194450151Rat
11394812LOC10835302940S ribosomal protein S6 pseudogene159448741794488169Rat
9449268LOC103693782uncharacterized LOC103693782159453665594540278Rat
1564975Dctdopachrome tautomerase159506200695100863Rat
7620398LOC102548872uncharacterized LOC102548872159511475295122461Rat
7735776LOC102548945uncharacterized LOC102548945159515310795163012Rat
11492158Trnaf-gaa5transfer RNA phenylalanine (anticodon GAA) 5159515332395153395Rat
1306544TgdsTDP-glucose 4,6-dehydratase159517506495195555Rat
1359193Gpr180G protein-coupled receptor 180159519578295224955Rat
1304724Sox21SRY-box transcription factor 21159529242995296024Rat
7654866LOC102549101uncharacterized LOC102549101159535610895360987Rat
40937839LOC120097261small nucleolar RNA SNORA17159536277595362881Rat
9095740LOC103693790uncharacterized LOC103693790159539505695417585Rat
620266Abcc4ATP binding cassette subfamily C member 4159554118695774898Rat
41363845LOC120097318U6 spliceosomal RNA159564706895647171Rat
41192109LOC120097081uncharacterized LOC120097081159566944695671421Rat
41059821LOC120097082uncharacterized LOC120097082159584002795844074Rat
41163671LOC120097255small nucleolar RNA SNORA17159584439295844525Rat
1308027Cldn10claudin 10159586278595954526Rat
1307701Dzip1DAZ interacting zinc finger protein 1159595632996009994Rat
708518Dnajc3DnaJ heat shock protein family (Hsp40) member C3159602560596068585Rat
41023110S100a10-ps1S100 calcium binding protein A10, pseudogene 1159602997896030291Rat
1563520Uggt2UDP-glucose glycoprotein glucosyltransferase 2159607455796239365Rat
41032975LOC120097083uncharacterized LOC120097083159623935996242484Rat
1305888Hs6st3heparan sulfate 6-O-sulfotransferase 3159628150297000804Rat
41303432LOC120097180uncharacterized LOC120097180159635699596381188Rat
41340417LOC120097294U6 spliceosomal RNA159668169196681797Rat
7499911LOC102546571uncharacterized LOC102546571159674755696802385Rat
41031812LOC120097179uncharacterized LOC120097179159694132296951978Rat
11416357LOC108352977uncharacterized LOC108352977159704529097048825Rat
1592106Gapdhl5glyceraldehyde-3-phosphate dehydrogenase like 5159712898497129907Rat
1594175Zcchc9-ps1zinc finger CCHC-type containing 9, pseudogene 1159714046097141352Rat
1303155Oxgr1oxoglutarate receptor 1159714594797146960Rat
11433702LOC108352979uncharacterized LOC108352979159714828597155674Rat
41241680LOC120097084uncharacterized LOC120097084159722963997238607Rat
7563047LOC102547244uncharacterized LOC102547244159726669697271473Rat
7609495LOC102551086uncharacterized LOC102551086159729515697300575Rat
41353381LOC120097085uncharacterized LOC120097085159730884897313364Rat
1591755Mbnl2muscleblind-like splicing regulator 2159738527897542924Rat
40955435LOC120097086uncharacterized LOC120097086159747272197483347Rat
41062514LOC120097087uncharacterized LOC120097087159751874297528413Rat
41347773LOC120097088uncharacterized LOC120097088159759071997594836Rat
620590Rap2aRAP2A, member of RAS oncogene family159759684897597338Rat
41052703LOC120097090uncharacterized LOC120097090159768577697687881Rat
11423500LOC108352981uncharacterized LOC108352981159780958397827270Rat
1308715Ipo5importin 5159799075598041074Rat
2323549Rps7-ps12ribosomal protein S7, pseudogene 12159806191398062536Rat
6501347LOC100909886uncharacterized LOC100909886159809105498094498Rat
1305346Farp1FERM, ARH/RhoGEF and pleckstrin domain protein 1159812430498363299Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10504D15Mco2226158064042880640727Ratregion
10504D15Mco2226158064050180640727Ratregion
10672D15Mgh1298154197160441971702Ratregion
11235D15Wox6221154603246746032688Ratregion
33820D15Mit6210159136585891366070Ratregion
34094D15Mit8150155339471153394861Ratregion
34160D15Mgh5108159501812095018228Ratregion
34162D15Mgh6218159584030895840528Ratregion
34222D15Mgh8139157369051873690657Ratregion
34353D15Mgh2137155053179750531936Ratregion
34357D15Mgh4106157630609976306205Ratregion
34409D15Mgh9158158226252082262678Ratregion
34471D15Mgh3149155559495855596089Ratregion
34471D15Mgh3149155559593955596089Ratregion
34619D15Mgh11142154475939144759533Ratregion
36013D15Rat34162154585258545852747Ratregion
36149D15Rat26147159234692692347073Ratregion
36293D15Rat35146154222207442222220Ratregion
37206D15Rat56101154418755044187649Ratregion
37276D15Rat68140155648442056484560Ratregion
37534D15Rat49114159731991197320025Ratregion
37584D15Rat71197157832994278330139Ratregion
35230D15Rat22146157369906973699215Ratregion
35362D15Rat19156155079449450794652Ratregion
35455D15Rat20151155281302852813179Ratregion
35497D15Rat25154159300474493004898Ratregion
36880D15Rat15175154164721641647391Ratregion
37014D15Rat24130159444176894441898Ratregion
37086D15Rat23138157600356976003707Ratregion
37192D15Rat133216154980576549805981Ratregion
37620D15Rat74181155260878152608962Ratregion
37696D15Rat59224155796459157964817Ratregion
37794D15Rat48206155530190755302115Ratregion
37918D15Rat39242155531575355315995Ratregion
37954D15Rat61136154411472844114864Ratregion
36663D15Rat21193156832716568327360Ratregion
34805D15Rat32102154930847949308583Ratregion
34910D15Rat14144154063126840631412Ratregion
35611D15Rat11151154618729146187442Ratregion
35661D15Rat33125154579421645794341Ratregion
35757D15Rat16141154775071447750839Ratregion
40490D15Rat127248159513767995137927Ratregion
40516D15Rat106214159828795598288169Ratregion
40554D15Rat93171155655405456554225Ratregion
40606D15Rat122171155078213050782301Ratregion
40106D15Rat102153159008859190088744Ratregion
40312D15Rat100127158237185882371986Ratregion
38846D15Rat46207155020925750209472Ratregion
39192D15Rat47208156644312766443335Ratregion
39324D15Rat51236159438973094389966Ratregion
39458D15Rat95209156318067563180884Ratregion
39490D15Rat112142154461786244618004Ratregion
39524D15Rat98136157369906973699205Ratregion
39570D15Rat104237159416388094164117Ratregion
41926D15Rat37160155365631153656471Ratregion
42006D15Arb2230156099046860990698Ratregion
42012D15Arb6241154197156041971801Ratregion
41302D15Rat99145157530007875300223Ratregion
41332D15Rat94171156962579369625966Ratregion
43051D15Rat146202155081975550819957Ratregion
43052D15Rat14899155122942151229521Ratregion
43058D15Rat154233158257684382577076Ratregion
43059D15Rat155240159303357493033814Ratregion
43060D15Rat156229159303357493033803Ratregion
43061D15Rat158124159734106197341189Ratregion
43062D15Rat128246159749187197492117Ratregion
42405D15Rat164199154240210642402305Ratregion
42406D15Rat165125155317701353177138Ratregion
42408D15Rat166143157780480477804947Ratregion
40882D15Rat97224157147706771477291Ratregion
41010D15Rat96173156520576265205939Ratregion
41114D15Rat89230154692122346921453Ratregion
41636D15Rat123137155284790852848045Ratregion
41708D15Rat125135156272548662725621Ratregion
41748D15Rat126244157544863775448881Ratregion
44552D9Wox21136154929577549295829Ratregion
44552D9Wox21136156641797866418033Ratregion
44552D9Wox21136158873042688730477Ratregion
44552D9Wox21136158887494088874993Ratregion
43400D15Got96132158924782489247958Ratregion
45595D18Got3281157126847471270091Ratregion
60117D15Got70156155545954655459704Ratregion
60118D15Got73139155492565854925797Ratregion
60119D15Got78207157750183977502046Ratregion
60120D15Got80140157718524377185383Ratregion
60087D15Got110205154785466947854874Ratregion
45267D15Got46262154128623041286492Ratregion
45268D15Got51225154063348740633712Ratregion
45270D15Got50252154088782040888072Ratregion
45271D15Got49159154108101141081170Ratregion
45273D15Got111135155702911457029249Ratregion
45274D15Got72209155959517159595382Ratregion
45275D15Got60194155080401550804211Ratregion
45276D15Got76216157433206474332282Ratregion
45277D15Got74167157446214974462316Ratregion
45278D15Got77288157568115575681443Ratregion
45281D15Got75171157490768274907853Ratregion
45283D15Got79171158405677584056946Ratregion
45284D15Got81277158465544784655722Ratregion
45285D15Got82165158414198884142153Ratregion
45286D15Got83247158620456686204813Ratregion
45287D15Got8679158992367789923756Ratregion
45288D15Got93144158849997588500119Ratregion
45289D15Got84148158882144788821595Ratregion
45290D15Got85274159283353592833809Ratregion
45291D15Got90244159431851394318757Ratregion
45292D15Got89160158859656688596726Ratregion
45294D15Got91209159593313795933345Ratregion
45295D15Got92292159661393196614225Ratregion
45296D15Got95163159593318795933350Ratregion
45297D15Got94137159805086098050997Ratregion
45298D15Got113154159814430598144459Ratregion
625772D2Got189217158230919982309416Ratregion
625835D15Got115200155280070052800900Ratregion
60101D15Got53143154429930744299450Ratregion
60102D15Got54281154417997244180253Ratregion
60103D15Got55208154445381444454022Ratregion
60104D15Got56254154479651144796765Ratregion
60106D15Got58152154660284846603000Ratregion
60107D15Got59203154916778849167991Ratregion
60108D15Got61246155257993952580185Ratregion
60109D15Got62210155185289351853103Ratregion
60111D15Got64164155316034553160509Ratregion
60112D15Got65107155442203854422145Ratregion
60113D15Got66176155401940354019579Ratregion
60114D15Got67122155388807053888192Ratregion
60115D15Got68280155516674955167027Ratregion
60116D15Got69210155572901155729221Ratregion
62449D15Uia3168158057737880577545Ratregion
62451D15Uia4178155554945555549633Ratregion
66545D15Mco15166155656425156564417Ratregion
66633D15Mco3190158064555480645729Ratregion
66640D15Mco5223154437024644370459Ratregion
67268D15Arb7219154475931244759531Ratregion
1578852D10Chm22221159446336194463582Ratregion
1630632D15Got219138155361083053610968Ratregion
1631578D15Got231171156646680366466974Ratregion
1631609D15Uwm1156154101087941011035Ratregion
1631763D15Got206123155495323354953351Ratregion
1631895D15Got229141154533378745333928Ratregion
1631898D15Got228139157237680472376943Ratregion
1627753D15Got212172156794251067942682Ratregion
1628345D15Got233178156373476563734943Ratregion
1628726D15Got209163156669903966699202Ratregion
1629296D15Got210117156644314366443260Ratregion
1629313D15Wox13248158064814780648395Ratregion
1629889D15Got22291156409889464098985Ratregion
1640782D15Got243139156251061362510752Ratregion
1641365D15Got214112157806114278061254Ratregion
1641695D15Got247188156205529562055483Ratregion
1639818D15Got216163158064042880640789Ratregion
1639818D15Got216163158064062680640789Ratregion
1640262D15Got24191159688924496889335Ratregion
1640394D15Ulb3286158064656680646850Ratregion
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5502607RH125510154159602991996030073Ratregion
5502527RH125194171157998400579984176Ratregion
152025251rs81501320155391184753911847Ratregion
152025252rs645279520158625708586257085Ratregion
Position Markers

Flank 1: (D15Rat14)
Rat AssemblyChrPosition (strand)Source
GRCr81544,806,773 - 44,806,917 (+)Marker Load Pipeline
mRatBN7.21540,631,268 - 40,631,412 (+)MAPPER
Rnor_6.01543,097,470 - 43,097,613NCBI
Rnor_5.01548,493,430 - 48,493,573UniSTS
RGSC_v3.41545,870,097 - 45,870,241RGD
RGSC_v3.41545,870,098 - 45,870,241UniSTS
RGSC_v3.11545,885,878 - 45,886,021RGD
Celera1540,303,246 - 40,303,389UniSTS
RH 3.4 Map15310.4RGD
RH 3.4 Map15310.4UniSTS
RH 2.0 Map15290.6RGD
SHRSP x BN Map1533.4699RGD
Peak: (D15Mgh9)
Rat AssemblyChrPosition (strand)Source
GRCr81588,677,086 - 88,677,244 (+)Marker Load Pipeline
mRatBN7.21582,262,520 - 82,262,678 (+)MAPPER
Rnor_6.01589,640,684 - 89,640,841NCBI
Rnor_5.01593,131,834 - 93,131,991UniSTS
RGSC_v3.41589,569,707 - 89,569,864UniSTS
RGSC_v3.41589,569,706 - 89,569,864RGD
RGSC_v3.11589,585,486 - 89,585,644RGD
Celera1581,377,978 - 81,378,135UniSTS
SHRSP x BN Map1552.8498RGD
SHRSP x BN Map1552.8498UniSTS
Cytogenetic Map15q22UniSTS
Flank 2: (D15Rat106)
Rat AssemblyChrPosition (strand)Source
GRCr815104,694,807 - 104,695,021 (+)Marker Load Pipeline
mRatBN7.21598,287,955 - 98,288,169 (+)MAPPER
Rnor_6.015106,550,444 - 106,550,657NCBI
Rnor_5.015109,944,744 - 109,944,957UniSTS
RGSC_v3.415106,177,703 - 106,177,917RGD
RGSC_v3.415106,177,704 - 106,177,917UniSTS
RGSC_v3.115106,193,484 - 106,193,697RGD
Celera1597,072,390 - 97,072,603UniSTS
RH 3.4 Map15688.5RGD
RH 3.4 Map15688.5UniSTS
SHRSP x BN Map1565.3898RGD
SHRSP x BN Map1565.3898UniSTS
FHH x ACI Map1574.04RGD
Cytogenetic Map15q24-q25UniSTS


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549844Bss7Bone structure and strength QTL 76.4femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1575788062101769107Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
2300326Plaw1Placental weight QTL 1150.005placenta mass (VT:0004257)placenta wet weight (CMO:0002088)1568327165100062518Rat
1300118Bp190Blood pressure QTL 1902.94arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)158226252098288169Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
1358354Srcrt5Stress Responsive Cort QTL 53.38blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)159815000199043291Rat
70155Gcs1Gastric cancer susceptibility QTL13.8stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)1576306099101769107Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1300120Kidm7Kidney mass QTL 73.55kidney mass (VT:0002707)left kidney wet weight to body weight ratio (CMO:0001954)158226252098288169Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
2293686Bmd36Bone mineral density QTL 367.40.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)153361105871477291Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
1331724Bp223Blood pressure QTL 2233.53715arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)157369051895018228Rat
2293691Bmd37Bone mineral density QTL 376.60.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)153361105871477291Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
731177Uae26Urinary albumin excretion QTL 262.40.025urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1567588667101769107Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)154063126898288169Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
61477Aia4Adjuvant induced arthritis QTL 43joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)155559608991365858Rat
70182BpQTLcluster12Blood pressure QTL cluster 123.53arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)157369065795018120Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)152788577486257085Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)151985656646187442Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
1641889Colcr6Colorectal carcinoma resistance QTL 62.90.0126intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)157369051899794247Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
2306968Anxrr23Anxiety related response QTL 234.83reflex trait (VT:0001961)amplitude of the acoustic startle response (CMO:0001520)154063126846187442Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
724545Niddm54Non-insulin dependent diabetes mellitus QTL 540.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)155079449473699215Rat
724548Niddm55Non-insulin dependent diabetes mellitus QTL 550.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)156832736073699069Rat
631516Gluco31Glucose level QTL 317blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)155559608995018120Rat
1581519Cm59Cardiac mass QTL 592.80.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)158885347095840528Rat
2317050Aia24Adjuvant induced arthritis QTL 242.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)155284790873690657Rat
2313080Bss65Bone structure and strength QTL 653.90.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)156099046873690657Rat
2317055Aia10Adjuvant induced arthritis QTL 103.41joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1575788062101769107Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
1576315Schws6Schwannoma susceptibility QTL 60.0069nervous system integrity trait (VT:0010566)post-insult time of death (CMO:0002005)155380615298806152Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
1581555Eae19Experimental allergic encephalomyelitis QTL 194.7nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)157630609990088744Rat
631655Bp126Blood pressure QTL 1264arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1558156477101769107Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)153405413979054139Rat
7411725Strs7Sensitivity to stroke QTL 73.8cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)154028990149308583Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Rf23

RGD Curation Notes
Note Type Note Reference
qtl_general additional information, including phenotype and mapping information, can be found at Genomic Map of Cardiovascular Phenotypes 727992
qtl_general change in renal vascular resistance following acetylcholine dose 4 (0.19 ug/kg/min,SCOR64) 727992