Rf20 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Rf20 (Renal function QTL 20) Rattus norvegicus

Symbol: Rf20
Name: Renal function QTL 20
RGD ID: 1300130
Previously known as: SCOR103; SCOR105; Specialized Center of Research QTL 103, 105
Trait: kidney glomerulus integrity trait   (VT:0010546)    
Measurement Type: kidney glomerulus diameter   (CMO:0001166)    
LOD Score: 4.44
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,528,418 - 60,324,829RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01130,435,339 - 63,186,373RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01134,054,821 - 66,314,226RGDRnor5.0
RGSC_v3.41129,744,366 - 62,045,696RGDRGSC3.4
RGSC_v3.11129,744,438 - 62,103,285RGD
Cross Type: Not Available
Strains Crossed: BN/SsNHsd SS/JrHsdMcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/SsNHsd  (IEA)
SS/JrHsdMcwi  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genomic map of cardiovascular phenotypes of hypertension in female Dahl S rats. Moreno C, etal., Physiol Genomics 2003 Nov 11;15(3):243-57. Epub 2003 Oct 07.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
11414184Cebpzos-ps1CEBPZ opposite strand, pseudogene 1112953031029530538Rat
41277807LOC120095607uncharacterized LOC120095607112957770329584399Rat
1565091Hunkhormonally upregulated Neu-associated kinase112964112229758392Rat
9389452LOC103693516uncharacterized LOC103693516112990905429912650Rat
41324871LOC120095608uncharacterized LOC120095608112992457529928452Rat
1310778Mis18aMIS18 kinetochore protein A112996803029981058Rat
6489189LOC100911990uncharacterized LOC100911990112998110829983672Rat
41305555LOC120095609uncharacterized LOC120095609112998976929992786Rat
1310648Mrapmelanocortin 2 receptor accessory protein112999197430003024Rat
1304621Urb1URB1 ribosome biogenesis homolog113000453930065315Rat
1307569Eva1ceva-1 homolog C113008951030163596Rat
41031335LOC120095736small nucleolar RNA SNORA2/SNORA34 family113018143130181563Rat
1306954Cfap298cilia and flagella associated protein 298113018191630191302Rat
69434Synj1synaptojanin 1113019262930269447Rat
1584739Paxbp1PAX3 and PAX7 binding protein 1113027203730301504Rat
41088186LOC120095611uncharacterized LOC120095611113030135730306926Rat
1562726C11h21orf62similar to human chromosome 21 open reading frame 62113030784230325829Rat
41240395LOC120095610uncharacterized LOC120095610113032048430324436Rat
7532083LOC102554018uncharacterized LOC102554018113035103530356802Rat
11363569LOC108352305uncharacterized LOC108352305113037072730377409Rat
40971770LOC120095612uncharacterized LOC120095612113041930130454486Rat
1307098Olig2oligodendrocyte transcription factor 2113047551030478886Rat
41318062LOC120095613uncharacterized LOC120095613113048009730484413Rat
621129Olig1oligodendrocyte transcription factor 1113051437930516521Rat
41116111LOC120095614uncharacterized LOC120095614113056240830568186Rat
41273260LOC120095616uncharacterized LOC120095616113057900230704218Rat
41380760LOC120095615uncharacterized LOC120095615113061014830614465Rat
1583177Ifnar2interferon alpha and beta receptor subunit 2113061357630645958Rat
1560373Il10rbinterleukin 10 receptor subunit beta113064649430668081Rat
41175677LOC120095618uncharacterized LOC120095618113067321530674248Rat
41210253LOC120095617uncharacterized LOC120095617113067435330678151Rat
7675061LOC102554317uncharacterized LOC102554317113068363130694959Rat
1305399Ifnar1interferon alpha and beta receptor subunit 1113072577430752227Rat
41120160LOC120095619uncharacterized LOC120095619113074973030756069Rat
1586133Rps7-ps7ribosomal protein S7, pseudogene 7113075703130762242Rat
40962191LOC120095773U1 spliceosomal RNA113077348430773644Rat
1307532Ifngr2interferon gamma receptor 2113077973330798005Rat
1307561Tmem50btransmembrane protein 50B113080483530837675Rat
1309013SonSON DNA and RNA binding protein113085089030923167Rat
1359589Dnajc28DnaJ heat shock protein family (Hsp40) member C28113085556630858386Rat
1308717Gartphosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase113086489630891125Rat
1306823DonsonDNA replication fork stabilization factor DONSON113091983430933150Rat
1310219Cryzl1crystallin zeta like 1113093314030977936Rat
2935Itsn1intersectin 1113097859031160645Rat
621379Atp5poATP synthase peripheral stalk subunit OSCP113116521831171530Rat
41283450LOC120095621uncharacterized LOC120095621113120686331208811Rat
41356493LOC120095620uncharacterized LOC120095620113121099531217665Rat
41036128LOC120095622uncharacterized LOC120095622113128956831292034Rat
2322928Mrps6mitochondrial ribosomal protein S6113129535831348483Rat
621530Slc5a3solute carrier family 5 member 3113131384731316293Rat
41340718LOC120095623uncharacterized LOC120095623113137331931378956Rat
9394128LOC103693540uncharacterized LOC103693540113138151331395751Rat
41107969LOC120095786U2 spliceosomal RNA113139137131391550Rat
7555402LOC102548079uncharacterized LOC102548079113145618731464103Rat
40928655LOC120095626uncharacterized LOC120095626113146867531486304Rat
41059744LOC120095624uncharacterized LOC120095624113147053731495292Rat
41306765LOC120095625uncharacterized LOC120095625113150114431528577Rat
621383Kcne2potassium voltage-gated channel subfamily E regulatory subunit 2113151717631530026Rat
2299853Smim11small integral membrane protein 11113153325731543002Rat
1560327C11h21orf140similar to human chromosome 21 open reading frame 140113154968931552257Rat
2956Kcne1potassium voltage-gated channel subfamily E regulatory subunit 1113158095131594116Rat
11442325LOC108352307uncharacterized LOC108352307113158259431584124Rat
631338Rcan1regulator of calcineurin 1113162220831702150Rat
727938Clic6chloride intracellular channel 6113173781331780360Rat
41063304LOC120095806U6 spliceosomal RNA113179754531797651Rat
2283Runx1RUNX family transcription factor 1113183988032074427Rat
41097567Runx1lrunt related transcription factor 1 like113193591331937764Rat
7605601LOC102548550uncharacterized LOC102548550113217418932178241Rat
7601414LOC102549086uncharacterized LOC102549086113261356632623374Rat
2325478Mir802microRNA 802113262652532626620Rat
1562683RGD1562683RGD1562683113280365432816291Rat
619899Setd4SET domain containing 4113282950932859162Rat
41227328LOC120095803U4 spliceosomal RNA113284606532846217Rat
2286Cbr1carbonyl reductase 1113286057132862981Rat
41247314Trub2-ps4TruB pseudouridine synthase family member 2, pseudogene 4113286312832876362Rat
1583715Trub2-ps1TruB pseudouridine synthase family member 2, pseudogene 1113287189332873147Rat
41210949Cbr1l1carbonyl reductase 1 like 1113287656332884234Rat
6502456Trub2-ps3TruB pseudouridine synthase family member 2, pseudogene 3113288797432889228Rat
7631561Cbr1l2carbonyl reductase 1 like 2113289264032895277Rat
40930851Trub2-ps5TruB pseudouridine synthase family member 2, pseudogene 5113289954132905100Rat
11442152Cbr1-ps1carbonyl reductase 1, pseudogene 1113290885732911275Rat
41166387LOC120095629uncharacterized LOC120095629113292445232926939Rat
41283649LOC120095632uncharacterized LOC120095632113292942832931888Rat
41237799LOC120095631uncharacterized LOC120095631113293440832937446Rat
41210068LOC120095635uncharacterized LOC120095635113293938432941516Rat
41079523LOC120095636uncharacterized LOC120095636113294436232946496Rat
41032539LOC120095633uncharacterized LOC120095633113294934032951796Rat
41321996LOC120095634uncharacterized LOC120095634113295432632956795Rat
41127113Trub2-ps6TruB pseudouridine synthase family member 2, pseudogene 6113296589532966834Rat
2321756Cbr1l3carbonyl reductase 1 like 3113298513632992000Rat
1309728Cbr3carbonyl reductase 3113300861533016877Rat
1306097Dop1bDOP1 leucine zipper like protein B113302437633125931Rat
1306466Ifitm7interferon induced transmembrane protein 7113313714633137562Rat
1307924Morc3MORC family CW-type zinc finger 3113315190633194650Rat
1307634Chaf1bchromatin assembly factor 1 subunit B113320089433221076Rat
1309165Cldn14claudin 14113323228133329440Rat
41114239LOC120095564uncharacterized LOC120095564113339300433397850Rat
7542458LOC102546699uncharacterized LOC102546699113340815833414119Rat
1308016Sim2SIM bHLH transcription factor 2113341421833453663Rat
41034738LOC120095637uncharacterized LOC120095637113342932833438429Rat
1565360Hlcsholocarboxylase synthetase113345580633635197Rat
11459335LOC108352309small nuclear ribonucleoprotein F-like113353361433533927Rat
1308788Ripply3ripply transcriptional repressor 3113364847133656587Rat
1307205Pigpphosphatidylinositol glycan anchor biosynthesis, class P113368294333689111Rat
1308654Ttc3tetratricopeptide repeat domain 3113368911933788976Rat
41081753LOC120095762U1 spliceosomal RNA113374920433749367Rat
7741717LOC102549457uncharacterized LOC102549457113379901733801479Rat
1306879Vps26cVPS26 endosomal protein sorting factor C113381346733841883Rat
7529766Rpl11-ps5ribosomal protein L11, pseudogene 5113382900033830192Rat
11413324LOC108352311uncharacterized LOC108352311113383658333840680Rat
2528Dyrk1adual specificity tyrosine phosphorylation regulated kinase 1A113389070634009420Rat
9236019LOC103693522uncharacterized LOC103693522113394009233946120Rat
11503388LOC108352312uncharacterized LOC108352312113401828734038703Rat
40933433LOC120095638uncharacterized LOC120095638113403870834054691Rat
2959Kcnj6potassium inwardly-rectifying channel, subfamily J, member 6113406170234308758Rat
7642969LOC102550239uncharacterized LOC102550239113410389234135702Rat
41381986LOC120095639uncharacterized LOC120095639113427641834285077Rat
1594265Hsp90ab1-ps22heat shock protein 90 alpha family class B member 1, pseudogene 22113434060334342740Rat
11450454LOC108352313uncharacterized LOC108352313113435559134410861Rat
41166587LOC120095565uncharacterized LOC120095565113448276334487531Rat
7712236LOC102550135uncharacterized LOC102550135113449810434579531Rat
621662Kcnj15potassium inwardly-rectifying channel, subfamily J, member 15113457739734621725Rat
621108ErgETS transcription factor ERG113467861434900951Rat
41068989LOC120095800U4 spliceosomal RNA113487271634872838Rat
41221339LOC120095640uncharacterized LOC120095640113500624235012335Rat
1584977Ets2ETS proto-oncogene 2, transcription factor113502153635038322Rat
9160900LOC103693523uncharacterized LOC103693523113506680235079447Rat
11377006LOC108352314uncharacterized LOC108352314113509272635118544Rat
1305454Psmg1proteasome assembly chaperone 1113527608035285541Rat
1309030Brwd1bromodomain and WD repeat domain containing 1113528636435378768Rat
7489015Mir6324microRNA 6324113533182035331940Rat
2322308Rpl37a-ps9ribosomal protein L37A, pseudogene 9113541400435414735Rat
1307761Hmgn1high mobility group nucleosome binding domain 1113542232835428247Rat
735104Get1guided entry of tail-anchored proteins factor 1113543855535460156Rat
1562512Lca5llebercilin LCA5 like113546064635495133Rat
1563599Sh3bgrSH3 domain binding glutamate-rich protein113550366335527853Rat
41352594LOC120095641uncharacterized LOC120095641113557954735583788Rat
1306727B3galt5Beta-1,3-galactosyltransferase 5113558427335630922Rat
7489018Mir6325microRNA 6325113567919635679336Rat
1359642Igsf5immunoglobulin superfamily, member 5113568651335729396Rat
1592358Itgb2l-ps1integrin beta-2-like, pseudogene 1113574170735758826Rat
3271Pcp4Purkinje cell protein 4113575971135861725Rat
619992DscamDS cell adhesion molecule113592192436507100Rat
7740143LOC102551331uncharacterized LOC102551331113622115136233362Rat
41016764LOC120095543uncharacterized LOC120095543113622755136229768Rat
41186609Tsnax-ps1translin-associated factor X, pseudogene 1113631775236318634Rat
41158912LOC120095542uncharacterized LOC120095542113635272336363724Rat
41366650LOC120095544uncharacterized LOC120095544113648075436482857Rat
11399837LOC108352389uncharacterized LOC108352389113662187736641416Rat
1303241Bace2beta-secretase 2113670744736789550Rat
3127Mx1MX dynamin like GTPase 1113679965936825209Rat
1311662Fam3bFAM3 metabolism regulating signaling molecule B113683153236863902Rat
628821Mx2MX dynamin like GTPase 2113690569836936308Rat
620766Tmprss2transmembrane serine protease 2113693430636973779Rat
41188497LOC120095741small nucleolar RNA SNORA48113705383037053976Rat
3220Oaz1-ps1ornithine decarboxylase antizyme 1, pseudogene 1113708458637085595Rat
11375877LOC108352390uncharacterized LOC108352390113710922437111370Rat
1311691Ripk4receptor-interacting serine-threonine kinase 4113712255537144799Rat
1310055Prdm15PR/SET domain 15113716460837225172Rat
11359460LOC108352316uncharacterized LOC108352316113722153937339703Rat
735112C2cd2C2 calcium-dependent domain containing 2113722532137289741Rat
41321293LOC120095643uncharacterized LOC120095643113724779237251435Rat
40936948Rps17-ps5ribosomal protein S17, pseudogene 5113729460537308944Rat
1310841Zbtb21zinc finger and BTB domain containing 21113731233737327040Rat
1586131Lrrc57-ps2leucine rich repeat containing 57, pseudogene 2113734419437344901Rat
6495041Fignl2-ps1fidgetin-like 2, pseudogene 1113738458337405340Rat
11415410Pdcd7-ps1programmed cell death 7, pseudogene 1113745712637474155Rat
41156722Nsun3-ps1NOP2/Sun RNA methyltransferase 3, pseudogene 1113746409237477551Rat
2322119Nsun3NOP2/Sun RNA methyltransferase 3113749083237575607Rat
41268022Psrc1-ps1proline and serine rich coiled-coil 1, pseudogene 1113756610637567122Rat
9341576LOC103693529uncharacterized LOC103693529113758007237592921Rat
1565472Tmem127l1transmembrane protein 127 like 1113767967537680635Rat
41076501LOC120095714U6 spliceosomal RNA113768280437682913Rat
2320506Eif1a-ps3eukaryotic translation initiation factor 1A, pseudogene 1113783704637894987Rat
1564179Pgk1-ps11phosphoglycerate kinase 1, pseudogene 11113803209138033326Rat
40958082LOC120095759small nucleolar RNA SNORA17113828573538285868Rat
9295737LOC103693547uncharacterized LOC103693547113835449438385411Rat
1583651Pkm-ps15pyruvate kinase M1/2, pseudogene 15113840386538405544Rat
1559516Rps2-ps38ribosomal protein S2, pseudogene 38113842172838422600Rat
7705653LOC102555459uncharacterized LOC102555459113845862338542106Rat
1583614Pes1-ps3pescadillo ribosomal biogenesis factor 1, pseudogene 3113877388338774944Rat
41191610LOC120095777small nucleolar RNA SNORD19B113930507539305145Rat
9071267LOC103693548uncharacterized LOC103693548113935295039365668Rat
41132892LOC120095808U6 spliceosomal RNA113948477239484878Rat
1562187Vta1-ps1vesicle trafficking 1, pseudogene 1113961314839614071Rat
1304614Epha6Eph receptor A6113975750140708901Rat
7509287LOC102556000uncharacterized LOC102556000113976420639775638Rat
41272276LOC120095545uncharacterized LOC120095545113977562839777087Rat
7604183Acat2-ps1acetyl-CoA acetyltransferase 2, pseudogene 1114038078840382809Rat
41385321LOC120095724U7 small nuclear RNA114054666740546725Rat
1305535Arl6ADP-ribosylation factor like GTPase 6114071187840738254Rat
1305628Crybg3crystallin beta-gamma domain containing 3114074919840861753Rat
708521Riox2ribosomal oxygenase 2114086136540884782Rat
1584981Nlrp4a-ps1NLR family, pyrin domain containing 4A, pseudogene 1114088428140905699Rat
621564Gabrr3gamma-aminobutyric acid type A receptor subunit rho3114090281240955263Rat
1333369Or5ac25olfactory receptor family 5 subfamily AC member 25114099973441000654Rat
1333619Or5ac24olfactory receptor family 5 subfamily AC member 24114100899041009910Rat
1333309Or5ac23olfactory receptor family 5 subfamily AC member 23114101703341017950Rat
1332924Or5ac23bolfactory receptor family 5 subfamily AC member 23B114103367041034587Rat
1333081Or5ac22olfactory receptor family 5 subfamily AC member 22114105917041060087Rat
1334206Or5ac21olfactory receptor family 5 subfamily AC member 21114107561241076532Rat
1333204Or5ac20-ps1olfactory receptor family 5 subfamily AC member 20, pseudogene 1114111185341112768Rat
1334340Or5h26olfactory receptor family 5 subfamily H member 26114113428641135215Rat
1333449Or5h27olfactory receptor family 5 subfamily H member 27114115137241157144Rat
41029306LOC120095566olfactory receptor 5AC1-like114116051841161438Rat
1334226Or5ac19olfactory receptor family 5 subfamily AC member 19114118427841185201Rat
1333463Olr1537olfactory receptor 1537114121143641212356Rat
1332608Or5h27bolfactory receptor family 5 subfamily H member 27B114123137741232306Rat
1333239Or5h26bolfactory receptor family 5 subfamily H member 26B114124218241243111Rat
1332965Or5k3olfactory receptor family 5 subfamily K member 3114125902641259952Rat
2321335Dppa2l-ps1developmental pluripotency-associated 2 like, pseudogene 1114128999041291084Rat
1334428Or5ac15olfactory receptor family 5 subfamily AC member 15114129629641297216Rat
1332699Or5h25c-ps1olfactory receptor family 5 subfamily H member 25C, pseudogene 1114131677641317700Rat
1333347Or5h25bolfactory receptor family 5 subfamily H member 25B114133311241334035Rat
1334123Or5h25olfactory receptor family 5 subfamily H member 25114135634641357269Rat
1333633Or5h25dolfactory receptor family 5 subfamily H member 25D114136705141367974Rat
1333775Or5h24olfactory receptor family 5 subfamily H member 24114137800041378923Rat
1333231Or5h24bolfactory receptor family 5 subfamily H member 24B114138858541389508Rat
41294593LOC120095646uncharacterized LOC120095646114139002741400070Rat
1333850Or5h19-ps1olfactory receptor family 5 subfamily H member 19, pseudogene 1114140506841405998Rat
1333073Or5h18olfactory receptor family 5 subfamily H member 18114140519441423800Rat
1333634Or5bv1-ps1olfactory receptor family 5 subfamily BV member 1, pseudogene 1114142793941428782Rat
1332847Or5h17olfactory receptor family 5 subfamily H member 17114146211641463045Rat
1332676Or5at2-ps1olfactory receptor family 5 subfamily AT member 2, pseudogene 1114148826041489090Rat
1332966Or5h17bolfactory receptor family 5 subfamily H member 17B114149485741503724Rat
1332787Or5at1-ps1olfactory receptor family 5 subfamily AT member 1, pseudogene 1114151110141512226Rat
1332995Or5h17colfactory receptor family 5 subfamily H member 17C114151786541518794Rat
1333626Or5k17olfactory receptor family 5 subfamily K member 17114158879541589748Rat
1333528Or5k16olfactory receptor family 5 subfamily K member 16114160071641601669Rat
1333735Or5k15olfactory receptor family 5 subfamily K member 15114161240141613354Rat
1333804Or5k8olfactory receptor family 5 subfamily K member 8114164417641645105Rat
1333929Or5k14olfactory receptor family 5 subfamily K member 14114166915541670084Rat
1332816Olr1563olfactory receptor 1563114172396541724894Rat
1333068Olr1564olfactory receptor 1564114175630441757230Rat
1588125Or5k1-ps1olfactory receptor family 5 subfamily K member 1, pseudogene 1114182633741827302Rat
41374848LOC120095756small nucleolar RNA SNORA17114184305941843187Rat
1359273Cldnd1claudin domain containing 1114188312041889471Rat
1306639Gpr15G protein-coupled receptor 15114189830041899646Rat
1311817Cpoxcoproporphyrinogen oxidase114193658541946568Rat
1590640Ftdc2ferritin domain containing 2114196794741973373Rat
11424835LOC108352322ferritin heavy chain-like114198171941990330Rat
1303279St3gal6ST3 beta-galactoside alpha-2,3-sialyltransferase 6114206128242121801Rat
11379447LOC108352323uncharacterized LOC108352323114210220042107136Rat
620543Dcbld2discoidin, CUB and LCCL domain containing 2114212552542179927Rat
41319680LOC120095647uncharacterized LOC120095647114212974442136208Rat
7700174LOC102553634uncharacterized LOC102553634114218309942193552Rat
1590575Rps28l1ribosomal protein S28 like 1114225453342260302Rat
1589464Mapk3-ps3mitogen activated protein kinase 3, pseudogene 3114235289542364220Rat
1597040Ptma-ps7prothymosin alpha, pseudogene 7114237405442374940Rat
40945973LOC120095648uncharacterized LOC120095648114249835442535259Rat
41238407LOC120095745small nucleolar RNA SNORA17114266317342663305Rat
1309361Col8a1collagen type VIII alpha 1 chain114277685142906432Rat
1309437Cmss1cms1 ribosomal small subunit homolog114293439043232624Rat
1565927Filip1lfilamin A interacting protein 1-like114293735343177085Rat
1306090Tmem30ctransmembrane protein 30C114323966143258506Rat
11393230Rps13-ps3ribosomal protein S13, pseudogene 3114325865143260045Rat
1586130Rpsa-ps2ribosomal protein SA, pseudogene 2114327873543279707Rat
1307925Tbc1d23TBC1 domain family, member 23114330335543361507Rat
41238602Trnaa-agc25transfer RNA alanine (anticodon AGC) 25114331457243314644Rat
11409922LOC108352326ribosome biogenesis protein NSA2 homolog pseudogene114336196643362910Rat
1310494Nit2nitrilase family, member 2114336383943378713Rat
1303049Tomm70translocase of outer mitochondrial membrane 70114337871943417166Rat
11483287LOC108352328uncharacterized LOC108352328114341746543429188Rat
1310935Tmem45a2transmembrane protein 45A2114348350943527025Rat
7674515Rpl5-ps5ribosomal protein L5, pseudogene 5114352181643522837Rat
2320136Ube2i-ps2ubiquitin-conjugating enzyme E2I, pseudogene 2114362998243656632Rat
2323126Lnp1leukemia NUP98 fusion partner 1114366087343678727Rat
2320082Pdcd6ip-ps1programmed cell death 6 interacting protein, pseudogene114369678943697489Rat
6495353Tmem45atransmembrane protein 45A114371330943799526Rat
41302083Tceal9-ps1transcription elongation factor A like 9, pseudogene 1114372690443727543Rat
9999453Rps27a-ps21ribosomal protein S27a, pseudogene 21114373744943738184Rat
1307217Adgrg7adhesion G protein-coupled receptor G7114380810143877539Rat
1309751Tfgtrafficking from ER to golgi regulator114388554243911976Rat
1562717Abi3bpABI family member 3 binding protein114391218744128888Rat
41012418LOC120095649uncharacterized LOC120095649114394287343948111Rat
1596981Caprin1-ps1cell cycle associated protein 1, pseudogene 1114427547744278213Rat
708358Impg2interphotoreceptor matrix proteoglycan 2114431883644418382Rat
1305510Senp7SUMO specific peptidase 7114442373344584129Rat
41249040Mrpl45-ps1mitochondrial ribosomal protein L45, pseudogene 1114453673944538285Rat
41063052LOC120095650uncharacterized LOC120095650114456363144582482Rat
1306333Trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit114458438844589466Rat
41314188LOC120095729small nucleolar RNA SNORA70114458628844586425Rat
1563775PcnpPEST proteolytic signal containing nuclear protein114459276644607372Rat
1308275Zbtb11zinc finger and BTB domain containing 11114459869444652559Rat
11463329Gng5-ps4G protein subunit gamma 5, pseudogene 4114462721344627733Rat
41278412LOC120095738small nucleolar RNA SNORA29114463205844632191Rat
10395320Zbtb11os1zinc finger and BTB domain containing 11, opposite strand 1114465034344652085Rat
621191Rpl24ribosomal protein L24114465393744659346Rat
1307400Cep97centrosomal protein 97114468350344711471Rat
1584648Nxpe3neurexophilin and PC-esterase domain family, member 3114472690544777694Rat
41055807Ap3s1-ps1adaptor related protein complex 3 subunit sigma 1, pseudogene 1114475353644754188Rat
1310834NfkbizNFKB inhibitor zeta114478267644810722Rat
41021352LOC120095713U6 spliceosomal RNA114485825244858353Rat
11512909LOC108352329uncharacterized LOC108352329114487172844878921Rat
41380577LOC120095651uncharacterized LOC120095651114489505144900728Rat
11459578Trnap-agg13transfer RNA proline (anticodon AGG) 13114541892345418997Rat
1308138Zpld1zona pellucida-like domain containing 1114548288345524555Rat
41034586LOC120095796U2 spliceosomal RNA114588069545880867Rat
2321510Eef1akmt4-ps1EEF1A lysine methyltransferase 4, pseudogene 1114632249946324498Rat
40982162LOC120095720small nucleolar RNA SNORA71114638078246380914Rat
40936001LOC120095816U6 spliceosomal RNA114659427246594378Rat
41045040LOC120095758small nucleolar RNA SNORA17114660723246607355Rat
41263068LOC120095767small nucleolar RNA SNORA17114660766746607801Rat
41081391LOC120095804U5 spliceosomal RNA114715126247151354Rat
1564519Hmgb2l1high mobility group box 2-like 1114725258347253646Rat
41102808LOC120095652uncharacterized LOC120095652114730688947314714Rat
1586129Nr5a2-ps2nuclear receptor subfamily 5, group A, member 2, pseudogene 2114750371947505369Rat
41240667LOC120095769small nucleolar RNA SNORA17114778177647781888Rat
1586128Cluap1-ps1clusterin associated protein 1, pseudogene 1114782705248009762Rat
41234104LOC120095771small nucleolar RNA SNORA17114798842447988511Rat
619972Alcamactivated leukocyte cell adhesion molecule114833612348536296Rat
620535CblbCbl proto-oncogene B114858987848756940Rat
6487995LOC100912248uncharacterized LOC100912248114880712248808230Rat
9148111LOC103693556uncharacterized LOC103693556114963670549651884Rat
40962625LOC120095787U2 spliceosomal RNA114971117149711350Rat
41002058LOC120095567glyceraldehyde-3-phosphate dehydrogenase-like114979014549790566Rat
6504246LOC100909405uncharacterized LOC100909405115007456050080929Rat
11501773LOC108352392uncharacterized LOC108352392115010493050112143Rat
40949177LOC120095653uncharacterized LOC120095653115011230950118393Rat
7583323LOC102548829uncharacterized LOC102548829115014160950243532Rat
1559779Ccdc54coiled-coil domain containing 54115022421650227313Rat
41214868LOC120095654uncharacterized LOC120095654115023706450243649Rat
41375836LOC120095655uncharacterized LOC120095655115029394850317209Rat
41178532LOC120095707U6 spliceosomal RNA115034518850345302Rat
1309769BbxBBX high mobility group box domain containing115038124950628934Rat
1585855Rpl26-ps9ribosomal protein L26, pseudogene 9115055197650552471Rat
41010029LOC120095656uncharacterized LOC120095656115084648050881941Rat
2308Cd47Cd47 molecule115090605250970000Rat
11492405LOC108352331uncharacterized LOC108352331115100272051011181Rat
1305947Ift57intraflagellar transport 57115105152051124909Rat
11472061Hhla2HHLA2 member of B7 family115125768151271408Rat
6501029Myh15l1myosin, heavy chain 15 like 1115133487051461768Rat
6500618LOC100909977leukocyte surface antigen CD47-like115155488051619586Rat
1565858Myh15myosin, heavy chain 15115162192451763037Rat
41306467LOC120095735small nucleolar RNA SNORA44115167372751673834Rat
1310335Cip2acellular inhibitor of PP2A115179214351823016Rat
1563278Dzip3DAZ interacting zinc finger protein 3115182323551893353Rat
727934Retnlgresistin-like gamma115193094851932680Rat
68349Retnlaresistin like alpha115196172651963527Rat
1624215Retnlbresistin like beta115198348251985368Rat
1563011Trat1T cell receptor associated transmembrane adaptor 1115203575052077805Rat
1565610Morc1MORC family CW-type zinc finger 1115217876952384255Rat
11414924LOC10835239360S ribosomal protein L9 pseudogene115238857852389155Rat
1588602Rplp0-ps8ribosomal protein lateral stalk subunit P0, pseudogene 8115246717852468125Rat
1595098Rps15-ps14ribosomal protein S15, pseudogene 14115252353152523970Rat
1589201Dppa2developmental pluripotency-associated 2115254902452556740Rat
1595070Dppa4developmental pluripotency associated 4115257027952578779Rat
2322285H3f3a-ps9H3.3 histone A, pseudogene 9115264725052648006Rat
40927137LOC120095721U7 small nuclear RNA115269231252692371Rat
1593835Eif4a1-ps4eukaryotic translation initiation factor 4A1, pseudogene 4115276342352764465Rat
9460259LOC103693561zinc finger CCHC domain-containing protein 10 pseudogene115288807452888596Rat
41135138LOC120095817U6 spliceosomal RNA115293808652938192Rat
1588023Cfl1-ps11cofilin 1, pseudogene 11115307688853077384Rat
1593796Rpl3-ps3ribosomal protein L3, pseudogene 3115323777453279583Rat
40998757LOC120095568uncharacterized LOC120095568115335828053373353Rat
41034013LOC120095820U6 spliceosomal RNA115339016753390269Rat
1588603Pgd-ps1phosphogluconate dehydrogenase, pseudogene 1115415448854155991Rat
1309516Nectin3nectin cell adhesion molecule 3115436271254469351Rat
41230093LOC120095743small nucleolar RNA SNORA48115452518154525320Rat
1592613Hnrnpa1-ps30heterogeneous nuclear ribonucleoprotein A1, pseudogene 30115463775754691446Rat
1565249Cd96CD96 molecule115470229054776618Rat
9378503Zbed2zinc finger, BED-type containing 2115473381454734698Rat
1563504Plcxd2phosphatidylinositol-specific phospholipase C, X domain containing 2115480097754853348Rat
1591402Phldb2pleckstrin homology-like domain, family B, member 2115485917355078212Rat
7504264LOC102552450uncharacterized LOC102552450115497595854980672Rat
41314974LOC120095778small nucleolar RNA U13115504225055042354Rat
1308084Abhd10abhydrolase domain containing 10, depalmitoylase115508127355095044Rat
69301Tagln3transgelin 3115509988755113457Rat
1304655Tmprss7transmembrane serine protease 7115512799255166597Rat
1591333C11h3orf52similar to human chromosome 3 open reading frame 52115516698655192273Rat
1591321Gcsamgerminal center-associated, signaling and motility115519575755207011Rat
1309075Slc9c1solute carrier family 9 member C1115521177455278285Rat
1590262Traf4-ps1Tnf receptor associated factor 4, pseudogene 1115527834755280231Rat
1590252Cd200l2CD200 molecule like 2115527985355326753Rat
1590201Cd200l1CD200 molecule like 1115535043355401528Rat
3104Cd200Cd200 molecule115541016655437527Rat
1590173Paics-ps6phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 6115554545255546806Rat
1303280BtlaB and T lymphocyte associated115556368355588187Rat
708464Atg3autophagy related 3115562491455653249Rat
1564361Slc35a5solute carrier family 35, member A5115565337655674476Rat
69421Ccdc80coiled-coil domain containing 80115568516555718827Rat
7716883LOC102551825uncharacterized LOC102551825115572602055738868Rat
7594145LOC102551884uncharacterized LOC102551884115574680755767560Rat
41359196LOC120095569thymosin beta-10-like115580651255807153Rat
1563387Cd200r1lCD200 receptor 1-like115584263255860914Rat
6486401Syncrip-ps1synaptotagmin binding, cytoplasmic RNA interacting protein, pseudogene 1115587732455878959Rat
61837Cd200r1CD200 receptor 1115588693755921217Rat
7654125Riox2-ps1ribosomal oxygenase 2, pseudogene 1115589665455898921Rat
1310025Gtpbp8GTP-binding protein 8 (putative)115594577855955743Rat
1311458Nepronucleolus and neural progenitor protein115595826555970432Rat
9282111LOC103693572uncharacterized LOC103693572115597763856002987Rat
7682768LOC102552306uncharacterized LOC102552306115605529456057920Rat
1304550BocBOC cell adhesion associated, oncogene regulated115612269756198060Rat
1559942Cfap44cilia and flagella associated protein 44115619977256283964Rat
41172124LOC120095657uncharacterized LOC120095657115624458756245865Rat
1310729Spice1spindle and centriole associated protein 1115628929156332382Rat
1559616Sidt1SID1 transmembrane family, member 1115636278856459939Rat
1560175Usf3upstream transcription factor family member 3115647073856529736Rat
41393344LOC120095793U2 spliceosomal RNA115648531256485489Rat
1310944Naa50N(alpha)-acetyltransferase 50, NatE catalytic subunit115653836656560842Rat
1596464Atp6v1aATPase H+ transporting V1 subunit A115656144456614694Rat
41343076LOC120095658uncharacterized LOC120095658115656294256573857Rat
1305433Gramd1cGRAM domain containing 1C115663322956718570Rat
1303254Zdhhc23zinc finger DHHC-type palmitoyltransferase 23115671870256735063Rat
1566314Ccdc191coiled-coil domain containing 191115673565556806372Rat
1310054Qtrt2queuine tRNA-ribosyltransferase accessory subunit 2115680641756837239Rat
41134137LOC120095780small nucleolar RNA SNORA84115680951556809648Rat
41170694LOC120095768small nucleolar RNA SNORA17115686809356868177Rat
2521Drd3dopamine receptor D3115687968956931901Rat
1563191TigitT cell immunoreceptor with Ig and ITIM domains115702902457046627Rat
1560387Zbtb20zinc finger and BTB domain containing 20115705212957791214Rat
2325438Mir568microRNA 568115705397857054073Rat
40973116LOC120095548uncharacterized LOC120095548115723499457248198Rat
41164990LOC120095546uncharacterized LOC120095546115746866457489060Rat
41133424LOC120095547uncharacterized LOC120095547115758193857588372Rat
1583712Tnk1-ps1tyrosine kinase, non-receptor, 1, pseudogene 1115789125957893134Rat
40944194LOC120095788U2 spliceosomal RNA115792982857929976Rat
11414925LOC10835239660S ribosomal protein L21 pseudogene115807052858071009Rat
7501598LOC102550874uncharacterized LOC102550874115811472458162502Rat
62071Gap43growth associated protein 43115837637158470047Rat
71102Lsamplimbic system-associated membrane protein115854753360717328Rat
41293959LOC120095737small nucleolar RNA SNORA32115884652858846649Rat
11486206LOC108352336uncharacterized LOC108352336115964128259651262Rat
9078377Rpl9-ps17ribosomal protein L9, pseudogene 17116012057460158032Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
35483D11Rat15169112952841829528587Ratregion
41544D11Rat75150112962882629629090Ratregion
44904D11Got20164112962889729629061Ratregion
41544D11Rat75150112962894229629090Ratregion
5060188BF400669201112963822229638423Ratregion
44901D11Got24139112969269829692837Ratregion
5035022Hunk250112975522629755476Ratregion
5068888AU04686389112979588629795975Ratregion
38250D11Rat44203112993471629934913Ratregion
5048768RH133094180112996769229967872Ratregion
5073676RH137574200113000269130002891Ratregion
5043266RH129927165113000469330004858Ratregion
5064252BE114314164113002301930023183Ratregion
35679D11Rat16166113008569630085847Ratregion
59991D11Got21184113011982530120013Ratregion
44902D11Got23199113015998530160184Ratregion
33792D11Mit2256113015999530160257Ratregion
5079412RH140981201113018198430182185Ratregion
5045258RH131075198113019074630190944Ratregion
5039318RH127638195113019290830193103Ratregion
5054751RH143404195113019317130193366Ratregion
42948D11Rat98128113022318730223321Ratregion
5500905REN82086225113024546530245690Ratregion
5085814BQ206323141113027221530272356Ratregion
5081645BE117849150113028680230286952Ratregion
5033043RH137379206113031140030311606Ratregion
5081629BF420820122113044057230440694Ratregion
1631197D11Got136192113047629330476492Ratregion
5085064Olig2251113047680630477057Ratregion
5501474D21S39280113047724930477329Ratregion
5055881RH144056120113048033730480457Ratregion
5501530ECD24242150113051479030514940Ratregion
5035052Olig1295113051482130515116Ratregion
5076940RH139467181113051627430516454Ratregion
5029699AW523365134113051632130516454Ratregion
5032313AI836478103113051632630516429Ratregion
5500907REN83919237113054877530549014Ratregion
5035438AW531131133113061023630610369Ratregion
5030541AW534327185113061549030615675Ratregion
42949D11Rat110210113062291830623084Ratregion
5077512RH139798191113065827230658463Ratregion
5080260RH141477184113066786130668044Ratregion
5065794BE109880189113067321830673407Ratregion
5082903BF390378151113067751130677662Ratregion
5043394RH130000218113068881130689029Ratregion
5086280AI144765184113075186430752048Ratregion
5042720RH129605165113079682330796988Ratregion
66629D11Mco5220113082446630824687Ratregion
66629D11Mco5220113082446630824850Ratregion
5084636AI179029119113085384530853964Ratregion
5078766RH140539177113087893130879108Ratregion
5500909REN85607383113088055430880937Ratregion
5500911REN85702253113089908330899336Ratregion
5506656ECD017300113089916530900021Ratregion
5506656ECD017300113089916530900052Ratregion
5500915REN85703250113089932930899579Ratregion
5500913REN85704250113089955730899807Ratregion
5501752MARC_11511-11512:1001088403:1461113090070330901164Ratregion
5500917REN85711228113090105530901283Ratregion
5500919REN85712236113090125030901486Ratregion
5500921REN85731257113090558030905837Ratregion
5500923REN85732261113090581330906074Ratregion
5500925REN85733255113090605030906305Ratregion
5070482AU067731108113090706730907175Ratregion
5030461BF403131185113090989830910083Ratregion
5025146RH127092222113092275030922972Ratregion
5025146RH127092222113092275030922972Ratregion
5502431RH12481496113092293930923035Ratregion
5035566SON98113092294230923040Ratregion
5500362GDB:335409169113092294230923111Ratregion
5077544RH139817211113092338230923593Ratregion
5504131Donson595113092600230926597Ratregion
35323D11Rat24138113093660530936743Ratregion
5035418BE107455171113094116030941331Ratregion
5071920RH135361217113100122531001456Ratregion
5033911RH140585185113107063031070819Ratregion
34811D11Rat13134113107111231071247Ratregion
5057814BI283741166113109678231096948Ratregion
5500927REN86881246113111482231115068Ratregion
5054943RH143515168113115414931154317Ratregion
5075510RH138635166113115415331154319Ratregion
5079150RH140764192113116037431160566Ratregion
5079252RH140852184113116523631165582Ratregion
35933D11Rat12145113123913431239277Ratregion
5089707AU049315266113125552731255793Ratregion
5035028UniSTS:259143129113131541731315546Ratregion
5060238BI279882150113131613231316282Ratregion
5043698RH130175195113132415331324348Ratregion
5050516RH134101183113134808231348265Ratregion
5064670BF399546160113138336231383522Ratregion
44898D11Got29207113149925331499460Ratregion
5035024Kcne2248113152852331528771Ratregion
5077624RH139863197113152974431529941Ratregion
5074524RH138066166113153597931536145Ratregion
5035308BM386263180113157749731577677Ratregion
5051915RH94732100113158095131581051Ratregion
5043618RH130128172113162221331622385Ratregion
5044326RH130538216113162287631623092Ratregion
5506781G45351289113175754031757829Ratregion
55041235730466J16Rik919113177113931772058Ratregion
5040774RH128476205113178113831781343Ratregion
5072188RH136703151113179162231791773Ratregion
5044124RH130423185113183990031840085Ratregion
5059828BE103343194113184075031840944Ratregion
5080166RH141423188113184075731840944Ratregion
5070069RH94454189113184389431844083Ratregion
5027985D26532180113184389831844078Ratregion
5085391AW532993179113189985431900033Ratregion
5070480AI46210298113193594131936039Ratregion
5082117BF409675110113204113432041243Ratregion
5047800RH132535184113236862132368805Ratregion
41450D11Rat72134113248934832489473Ratregion
37904D11Rat36136113250788932508021Ratregion
5506276RH47149684113257868632579370Ratregion
5090805AU049973282113262358232623864Ratregion
44897D11Got28142113273386832734009Ratregion
34793D11Rat11150113279608632796236Ratregion
5072178RH136697164113281354632813710Ratregion
5064698BE108341180113282706832827248Ratregion
36346D11Mit10229113283509832835327Ratregion
5085066ORF21201113284567332845874Ratregion
5500380GDB:371657918113287118232872100Ratregion
5500380GDB:371657918113288726432888181Ratregion
5073914RH137712148113301444833014596Ratregion
5038718RH127062246113301661133016857Ratregion
5072896RH137117183113301663433016817Ratregion
5037053WI-11592117113301795533018072Ratregion
5064480BF399299159113303552933035688Ratregion
50350122610510B01Rik256113308464333084899Ratregion
5058498BI290556121113311970233119823Ratregion
5056893RH144641169113312568233125851Ratregion
5063646BF404482247113317748433177731Ratregion
5076470RH139194139113319382233193961Ratregion
5061488BE111888109113319424233194351Ratregion
5028583AI452146295113319432533194620Ratregion
5506495AFM286zb11139113320747333208612Ratregion
5045626RH131285181113322014633220951Ratregion
44896D11Got27271113323184633232121Ratregion
5085056Cldn14245113323294533233190Ratregion
5034313G67817242113329332333293565Ratregion
42375D11Rat114243113332269233322937Ratregion
5074534RH138072130113345335733453487Ratregion
5078210RH140208186113345594133456127Ratregion
5081348G67818348113345861733458965Ratregion
5062476BF397968176113347794933478125Ratregion
5074864RH138262217113350219833502415Ratregion
44894D11Got25177113353706033537232Ratregion
44895D11Got19194113354659333546787Ratregion
5085124BQ196240172113356028433560456Ratregion
5062132BE106240215113362346133623676Ratregion
5079100RH140735218113365548933655707Ratregion
5062508BF403345154113370049133700645Ratregion
5071976RH135393203113371555233715755Ratregion
5084642AI102584209113376163533761844Ratregion
5035030Ttc3259113376177033762029Ratregion
5076850RH139415212113378861433788826Ratregion
5086226AW529609122113379208233792204Ratregion
5082513BI274964195113381372433813919Ratregion
5032617RH134666213113381421033814423Ratregion
5081507BE117087150113381932633819476Ratregion
5056401RH144357108113382553033827086Ratregion
5066048BE116622186113390129833901484Ratregion
5030693BE107619152113390621133906363Ratregion
1635274D11Wox11178113400628134006459Ratregion
5047234RH132210186113406176034061946Ratregion
5086967AI412840159113407507534075234Ratregion
5051717RH94617143113407609934076242Ratregion
34987D11Rat97134113410700034107128Ratregion
5036384UniSTS:143667264113414894934149213Ratregion
5504135UniSTS:259101254113414901334149267Ratregion
66632D11Mco6350113422774434228097Ratregion
67238D11Arb9217113436157934361798Ratregion
5089021AU048908248113461273634612984Ratregion
5085060Kcnj15245113461801234618257Ratregion
5052545AI182284119113462140334621522Ratregion
5044240RH130490181113462150934621690Ratregion
5079182RH140783150113468010134680251Ratregion
5501846MARC_15619-15620:1017174255:3121113469863334699472Ratregion
33642D11Mit1123113491804134918164Ratregion
33642D11Mit1123113491804134918164Ratregion
5066746AU048175173113493847034938643Ratregion
5033837RH140303205113501192535012130Ratregion
5029051RH143332257113502796835028225Ratregion
5501712ETV21085113503510735036192Ratregion
5077394RH139731180113503774535037925Ratregion
5038720AU022856249113503805935038308Ratregion
1636266D11Got1310113506183735062019Ratregion
5086054BQ203737173113520115335201326Ratregion
5034317G67832282113524736035247642Ratregion
5027511AW552102111113527855535278666Ratregion
5076186RH139029216113528388235285516Ratregion
5055715RH143961143113528923835289381Ratregion
5084376AA944760186113529411935294305Ratregion
5507487ECD05402974113531771035318684Ratregion
5500186REN19887234113533925735339491Ratregion
5500188REN19888207113533946735339674Ratregion
1639262D11Got102248113535262635352874Ratregion
5048126RH132723218113536136335361581Ratregion
5501331ECD17717276113537836535378641Ratregion
5501331ECD17717276113537836535378641Ratregion
5087010BM386986213113541671235416925Ratregion
5087010BM386986213113541671235416925Ratregion
5043242RH129914197113542246635422663Ratregion
5043242RH129914197113542246635422663Ratregion
5083041BI275060150113545941735459567Ratregion
5083667BI276795157113545946135459618Ratregion
5089551AU049222222113549255135492773Ratregion
5061430BE111713156113552163235521788Ratregion
5071164RH134924182113552839735528579Ratregion
5505897UniSTS:49601992113562611735626209Ratregion
5035014B3galt5244113562622635626470Ratregion
7206474B3galt5516113562622635626742Ratregion
5504177UniSTS:259585386113562652235626908Ratregion
44878D16Got11229113567361235673841Ratregion
5045076RH130970185113586145635861641Ratregion
5083141BF390848188113592197335922161Ratregion
5058586BE102121168113592547435925642Ratregion
5504179UniSTS:259605402113592745635927858Ratregion
5035020Dscam242113592762635927868Ratregion
5086588BE114490216113610763836107854Ratregion
39198D11Rat35230113610921436109441Ratregion
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5050650RH134179181113670845736708638Ratregion
1630182D11Got114223113675121036751433Ratregion
5069268AU046608248113676863836768714Ratregion
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5505828UniSTS:49584351113693707436937125Ratregion
44886D11Got36143113700823437008375Ratregion
5033675RH139697192113704898137049173Ratregion
11026D11Wox9153113708449637084649Ratregion
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5504817ha21530113711195437112178Ratregion
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37516D11Rat39202113714899437149196Ratregion
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35441D11Rat48235113718413537184372Ratregion
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5502269RH124204128113756595037566078Ratregion
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35224D11Rat23174113765532137655495Ratregion
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36820D11Rat9162113910762339107778Ratregion
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39808D11Rat85249114030416940304418Ratregion
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5029259RH144116223114069734740697570Ratregion
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40546D11Rat71162114094618840946344Ratregion
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5028633RH125651246114188315441883400Ratregion
5502349RH124562159114188330941883468Ratregion
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41634D11Rat96171114191806341918216Ratregion
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42950D11Rat109200114239671342396899Ratregion
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5507007fj02a09.x10114321284643213450Ratregion
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502782502.MMHAP26FLA2.seq213114348046143480674Ratregion
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39698D11Rat67143114480316144803318Ratregion
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5028183D16Mit184127114505877945058906Ratregion
36095D11Rat7156114545932345459484Ratregion
41428D11Rat68156114578037245780540Ratregion
5067656AU047614118114685931346859426Ratregion
1629061D11Got133180114792332247923502Ratregion
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1631275D11Got105110115028508750285197Ratregion
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5506585BBX90115062320650623296Ratregion
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1634179D11Got127145115214456952144716Ratregion
5026480RH132374187115221922252219382Ratregion
5044666RH130734186115224540052245586Ratregion
5044666RH130734186115224540052245586Ratregion
5066580AU048273138115232843052328568Ratregion
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1628752D11Got132147115264224452642391Ratregion
1628752D11Got132147115264224452643075Ratregion
1633415D11Got134151115276286052763011Ratregion
1635820D11Got108189115341800053418189Ratregion
5088871AU048819260115358583853586098Ratregion
1634797D11Got126208115358589653586104Ratregion
5503548PVRL3__5617580115440795954408539Ratregion
5032555RH12011125115440803754408162Ratregion
5073496RH137470207115440938854409595Ratregion
5049752RH133661158115441091254411070Ratregion
5061486BE111876172115441483854415010Ratregion
5029671BF386882151115442016754420318Ratregion
5060322BG37877897115446897454469071Ratregion
5084612AI178367120115477639954776519Ratregion
5083281BG374132117115484794454848061Ratregion
5076602RH139271160115485167354851833Ratregion
34995D11Rat5138115493098254931120Ratregion
5054713RH143382178115503361655033794Ratregion
5080872RH141831205115507668355076888Ratregion
5077720RH139919182115507775755077938Ratregion
5043650RH130147151115509326955093420Ratregion
5074720RH138179164115510763155107795Ratregion
40158D11Rat65167115513672955136892Ratregion
5046934RH132039211115519582655196037Ratregion
5080230RH141460182115519799755198179Ratregion
5086006BM385238194115528481255285005Ratregion
5027507AF004023131115543621455436345Ratregion
67236D11Arb6239115543699855437237Ratregion
10911D11Wox3186115543703355437217Ratregion
5048816RH133122183115543731455437497Ratregion
1637099D11Got121169115545177855451947Ratregion
1632184D11Got120159115551217055512329Ratregion
5032549WI-22015131115562502355625154Ratregion
5025470RH128444196115567416155674357Ratregion
5032427AI505817150115581721055817360Ratregion
5048480RH132928182115584267955842861Ratregion
5075708RH138751173115595042755950601Ratregion
5075912RH138868154115595545255955606Ratregion
5090687AU049901183115601822556018408Ratregion
5060596BE110539162115619781856197980Ratregion
5071236RH134966180115628929056289470Ratregion
5031978AU046493241115639910356399338Ratregion
5086213AI101806166115645925256459418Ratregion
5045320RH131110202115647573056475932Ratregion
5079346RH140939188115647586956476057Ratregion
5084114AI175556138115653937556539513Ratregion
5505354Atp6v1a147115659809456598324Ratregion
5080950RH141877206115661269156612897Ratregion
5080950RH141877206115661269156612897Ratregion
5025220RH127473211115661435456614565Ratregion
5025220RH127473211115661435456614565Ratregion
5048802RH133114191115673290156734056Ratregion
5089839AU049393242115678373356783973Ratregion
5079434RH140994211115683663356836844Ratregion
5033167RH137829134115686671856866852Ratregion
5028711RH71216178115687974856879926Ratregion
5087828Drd3107115687981556879922Ratregion
5501287DRD3-556F200115687985656881140Ratregion
5089265AU049053275115691830956918584Ratregion
5090617AU049859269115691922456919495Ratregion
1633479D11Got110148115691934756919497Ratregion
5089679AU049298210115698542556985631Ratregion
5065828BF406606239115705441957054658Ratregion
5078652RH140468128115707336357073491Ratregion
5077174RH139605192115707336357073555Ratregion
5075150RH138427175115707386557074040Ratregion
5503744ZBTB20_9462952115707542957076381Ratregion
5502949Zbtb20812115708453357085345Ratregion
5074766RH138206200115711901857119218Ratregion
5058344BF419565132115717865457178786Ratregion
5505534STS-Z40707455115729534557295800Ratregion
5030013BF400664175115734644757346623Ratregion
1641412D11Got109206115743386757434075Ratregion
59996D11Got49241115761544457615683Ratregion
44870D11Got47221115761545257615671Ratregion
5028189D16Mit40240115770290057703140Ratregion
5090405AU049731264115777687457777139Ratregion
59995D11Got48204115824260158242807Ratregion
5035785PMC17794P1165115842450558424670Ratregion
5066800AU048143154115844803058448184Ratregion
5087408UniSTS:2657090115846942858469776Ratregion
5087578PMC337033P3155115846953958469694Ratregion
5027743GAP430115846954358469694Ratregion
5064114BE114065168115854779658547964Ratregion
5055015RH143557106115855106458551170Ratregion
5045958RH131477213115855109658551309Ratregion
5061996BE112446185115855306458553249Ratregion
5074196RH137877135115855908458559219Ratregion
5058022BF386479162115873388058734042Ratregion
44875D11Got51202115882873158828933Ratregion
5033293RH138298143115885576658855909Ratregion
5030897BF399213192115896967858969870Ratregion
60010D11Got85164115912246159122625Ratregion
5075972RH138903139115915904459159183Ratregion
5040562RH128355220115918337059183590Ratregion
36342D11Mit9256115938586459386120Ratregion
1640941D11Got111269115938586859386137Ratregion
34112D11Mgh4194115980262259802794Ratregion
1638418D11Got139121115995643859956554Ratregion
5064568BE108126166116008266560082831Ratregion
5058160BF386702174116021954460219718Ratregion
35955D11Rat38171116032465660324829Ratregion
Position Markers

Flank 1: (D11Rat15)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21129,528,418 - 29,528,587 (+)MAPPER
Rnor_6.01130,435,339 - 30,435,507NCBI
Rnor_5.01134,054,821 - 34,054,989UniSTS
RGSC_v3.41129,744,438 - 29,744,606UniSTS
RGSC_v3.41129,744,366 - 29,744,736RGD
RGSC_v3.11129,744,438 - 29,744,606RGD
Celera1129,215,379 - 29,215,547UniSTS
RH 3.4 Map11167.8RGD
RH 3.4 Map11167.8UniSTS
RH 2.0 Map11469.5RGD
SHRSP x BN Map118.2299RGD
FHH x ACI Map1112.19RGD
Cytogenetic Map11q11UniSTS
Peak: (D11Rat71)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21140,946,188 - 40,946,344 (+)MAPPER
Rnor_6.01143,090,338 - 43,090,493NCBI
Rnor_5.01146,280,029 - 46,280,184UniSTS
RGSC_v3.41141,711,171 - 41,711,327RGD
RGSC_v3.41141,711,172 - 41,711,327UniSTS
RGSC_v3.11141,768,538 - 41,769,067RGD
Celera1140,788,124 - 40,788,287UniSTS
SHRSP x BN Map1113.7799RGD
SHRSP x BN Map1113.7799UniSTS
Cytogenetic Map11q12UniSTS
Flank 2: (D11Rat38)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21160,324,656 - 60,324,829 (+)MAPPER
Rnor_6.01163,186,203 - 63,186,373NCBI
Rnor_5.01166,314,056 - 66,314,226UniSTS
RGSC_v3.41162,045,525 - 62,045,696RGD
RGSC_v3.41162,045,526 - 62,045,696UniSTS
RGSC_v3.11162,103,115 - 62,103,285RGD
Celera1159,857,950 - 59,858,120UniSTS
RH 3.4 Map11518.5RGD
RH 3.4 Map11518.5UniSTS
RH 2.0 Map11213.3RGD
FHH x ACI Map1142.8799RGD
Cytogenetic Map11q21UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
1641927Alcrsp10Alcohol response QTL 10alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)11843667453436674Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)111647204744285911Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)112295940367959403Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)112328045668280456Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)112328045668280456Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112767241082846715Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)112952841860324829Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)112952841882566702Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)113123913478851519Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)114094618882566702Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)114428575982566702Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)114545932375190161Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)115445753486241447Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)115513672982993457Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)115635142486241447Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)115980279482566545Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)115980279482566553Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Rf20

RGD Curation Notes
Note Type Note Reference
qtl_general significant linkage also found to glomerular damage relative to level of hypertension (SCOR105, LOD=3.17) 727992
qtl_general additional information, including phenotype and mapping information, can be found at Genomic Map of Cardiovascular Phenotypes 727992
qtl_general glomerular injury index takes average glomeruli diameter into account (SCOR103) 727992