Hrtrt5 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Hrtrt5 (Heart rate QTL 5) Rattus norvegicus

Symbol: Hrtrt5
Name: Heart rate QTL 5
RGD ID: 1300116
Previously known as: Specialized Center of Research QTL 30; SCOR30; Hr5
Trait: heart pumping trait   (VT:2000009)    
Measurement Type: heart rate   (CMO:0000002)    
LOD Score: 3.76
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24116,179,486 - 151,161,268RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.04115,372,758 - 150,038,284RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04179,959,725 - 215,966,084RGDRnor5.0
RGSC_v3.44117,887,605 - 154,283,969RGDRGSC3.4
RGSC_v3.14118,132,148 - 154,528,810RGD
Cross Type: Not Available
Strains Crossed: BN/SsNHsd SS/JrHsdMcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
heart disease  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement
heart rate  (IDA)

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/SsNHsd  (IEA)
SS/JrHsdMcwi  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genomic map of cardiovascular phenotypes of hypertension in female Dahl S rats. Moreno C, etal., Physiol Genomics 2003 Nov 11;15(3):243-57. Epub 2003 Oct 07.
Related QTLs

Related QTL Description Reference
Hrtrt6 interacts with RGD:727992


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
9389444Vax2lventral anterior homeobox 2 like4116178416116195253Rat
621133Vax2ventral anterior homeobox 24116195528116219597Rat
11488278LOC108350721uncharacterized LOC1083507214116211039116218830Rat
1310619Atp6v1b1ATPase H+ transporting V1 subunit B14116223799116242475Rat
1561200Ankrd53ankyrin repeat domain 534116245561116253018Rat
1305851Tex261testis expressed 2614116253547116260730Rat
11437638LOC10835072260S ribosomal protein L27 pseudogene4116278373116281125Rat
1305057NagkN-acetylglucosamine kinase4116281179116293870Rat
1307930Paip2bpoly(A) binding protein interacting protein 2B4116292001116323387Rat
1309746Zfp638zinc finger protein 6384116355934116475051Rat
1586000Rps15-ps12ribosomal protein S15, pseudogene 124116373761116374229Rat
41152310LOC120102555U4 spliceosomal RNA4116423166116423314Rat
41233693LOC120102633small nucleolar RNA SNORA54116471399116471527Rat
1311023Dysfdysferlin4116490877116690709Rat
11421296LOC10835086960S ribosomal protein L31 pseudogene4116921291116921723Rat
631379Cyp26b1cytochrome P450, family 26, subfamily b, polypeptide 14117041808117058628Rat
1560638Exoc6bexocyst complex component 6B4117094741117550221Rat
41340927LOC120102746small nucleolar RNA U134117499018117499122Rat
1585860Smokxl-ps3sperm motility kinase X like, pseudogene 34117569008117569987Rat
41129602LOC120102669small nucleolar RNA SNORA174117587214117587345Rat
41282493LOC120102708small nucleolar RNA SNORA174117652870117652993Rat
3753Sprsepiapterin reductase4117671948117676292Rat
41009709LOC120102711small nucleolar RNA SNORA174117685079117685209Rat
1560795Spr-ps1sepiapterin reductase, pseudogene 14117689458117693286Rat
41359859LOC120102324uncharacterized LOC1201023244117723370117725707Rat
1564002Emx1empty spiracles homeobox 14117725148117741616Rat
628706Sfxn5sideroflexin 54117750213117869826Rat
1592069Rab11fip5RAB11 family interacting protein 54117871301117908819Rat
1584703Ass1-ps2argininosuccinate synthase 1, pseudogene 24117912849117927565Rat
1562910Notonotochord homeobox4117961163117965402Rat
1309153Smyd5SMYD family member 54117969615117984082Rat
1583112Pradc1protease-associated domain containing 14117984732117989710Rat
1306422Cct7chaperonin containing TCP1 subunit 74117989232118006478Rat
1566130Fbxo41F-box protein 414118007517118039547Rat
2546Egr4early growth response 44118047869118050328Rat
1311590Alms1ALMS1, centrosome and basal body associated protein4118125581118226005Rat
9142253Ybx1-ps2Y box binding protein 1, pseudogene 24118133614118134832Rat
41200685LOC120102325uncharacterized LOC1201023254118176974118190926Rat
621607Nat8f3N-acetyltransferase 8 (GCN5-related) family member 34118241792118246010Rat
621610Nat8f5N-acetyltransferase 8 (GCN5-related) family member 54118260323118285038Rat
1586026Emilin1-ps1elastin microfibril interfacer 1, pseudogene 14118262387118266491Rat
621609Nat8N-acetyltransferase 84118279521118284671Rat
2324329Nat8-ps1N-acetyltransferase 8, pseudogene 14118303631118305781Rat
1561619Nat8f2N-acetyltransferase 8 (GCN5-related) family member 24118319984118323159Rat
7636572Nat8f4N-acetyltransferase 8 (GCN5-related) family member 44118326092118332591Rat
621606Nat8f1N-acetyltransferase 8 (GCN5-related) family member 14118336208118342923Rat
1309786TprkbTp53rk binding protein4118342910118357908Rat
621605Nat8bN-acetyltransferase 8B4118359445118364351Rat
1307038Dusp11dual specificity phosphatase 114118367673118385183Rat
7547913LOC102549328uncharacterized LOC1025493284118400779118416614Rat
41388537LOC120102326uncharacterized LOC1201023264118416642118424029Rat
1564754Figlafolliculogenesis specific bHLH transcription factor4118432517118436846Rat
2042Add2adducin 24118444594118538505Rat
3849Tgfatransforming growth factor alpha4118618043118700897Rat
11502286LOC108350725uncharacterized LOC1083507254118778620118792730Rat
1304825Fam136afamily with sequence similarity 136, member A4118805129118811046Rat
1584713Snrpgsmall nuclear ribonucleoprotein polypeptide G4118812278118819827Rat
41150073LOC120102639small nucleolar RNA SNORA2/SNORA34 family4118815877118816012Rat
628652Pcyox1prenylcysteine oxidase 14118832114118842951Rat
11508600Trnag-ccc4transfer RNA glycine (anticodon CCC) 44118852419118852489Rat
1305742Tia1TIA1 cytotoxic granule-associated RNA binding protein4118852765118883252Rat
1306746C4h2orf42similar to human chromosome 2 open reading frame 424118887688118916808Rat
1561319Pcbp1poly(rC) binding protein 14118972698118974705Rat
1584384Tma7l1translation machinery associated 7 homolog like 14118986414118988248Rat
7667063LOC102554372uncharacterized LOC1025543724119012925119030617Rat
1560859Asprv1aspartic peptidase, retroviral-like 14119077415119078887Rat
1564525Mxd1max dimerization protein 14119097353119118080Rat
1310925Snrnp27small nuclear ribonucleoprotein U4/U6.U5 subunit 274119123676119133234Rat
1359265Gmcl1germ cell-less 1, spermatogenesis associated4119140598119179891Rat
621171Anxa4annexin A44119184378119241183Rat
41374913LOC120102638small nucleolar RNA SNORA2/SNORA34 family4119234751119234887Rat
1305520Aak1AP2 associated kinase 14119300128119451834Rat
2322888Rpl22-ps2ribosomal protein L22, pseudogene 24119350419119350883Rat
41257949LOC120102328uncharacterized LOC1201023284119415816119417839Rat
1307823Nfu1NFU1 iron-sulfur cluster scaffold4119458981119480162Rat
1549703Gfpt1glutamine fructose-6-phosphate transaminase 14119496691119546472Rat
1307144Antxr1ANTXR cell adhesion molecule 14119590770119778232Rat
40955934LOC120102329uncharacterized LOC1201023294119717819119729211Rat
1311934Gkn2gastrokine 24119778326119824366Rat
735014Gkn1gastrokine 14119790101119795389Rat
1597754Gkn3gastrokine 34119828859119833924Rat
1562986Bmp10bone morphogenetic protein 104119872066119877694Rat
1562105Arhgap25Rho GTPase activating protein 254119896844119974982Rat
708443Prokr1prokineticin receptor 14120022301120033367Rat
1565557Aplfaprataxin and PNKP like factor4120070471120122656Rat
41291607LOC120102330uncharacterized LOC1201023304120086931120112957Rat
2323785Cfap92cilia and flagella associated protein 924120126565120181575Rat
6497663LOC100910604uncharacterized LOC1009106044120187658120188705Rat
1596494Efcc1EF-hand and coiled-coil domain containing 14120188202120223464Rat
1561601Gp9glycoprotein IX (platelet)4120235500120237110Rat
1565300Rab43RAB43, member RAS oncogene family4120249650120269174Rat
1307688Isy1ISY1 splicing factor homolog4120276535120297227Rat
621807CnbpCCHC-type zinc finger, nucleic acid binding protein4120302768120311694Rat
2323735Gsta4-ps4glutathione S-transferase alpha 4, pseudogene 44120318859120320679Rat
41150042LOC120102331uncharacterized LOC1201023314120353804120366389Rat
9124640LOC10369217960S ribosomal protein L34 pseudogene4120362254120362604Rat
1565292Copg1COPI coat complex subunit gamma 14120366540120392502Rat
1559800Hmces5-hydroxymethylcytosine binding, ES cell specific4120392812120415616Rat
1565596H1f10H1.10 linker histone4120440515120441578Rat
61908Rab7aRAB7A, member RAS oncogene family4120461966120510756Rat
3594Rpn1ribophorin I4120543667120565069Rat
41402798LOC120102332uncharacterized LOC1201023324120567736120572576Rat
9252280LOC103692180uncharacterized LOC1036921804120584341120590943Rat
7562079LOC102554068uncharacterized LOC1025540684120590582120622585Rat
41376499LOC120102333uncharacterized LOC1201023334120648227120658210Rat
2664Gata2GATA binding protein 24120654205120667763Rat
1561981Dnajb8DnaJ heat shock protein family (Hsp40) member B84120681918120685108Rat
1562716Tcp1-ps1t-complex protein 1, pseudogene 14120705645120707221Rat
41153665LOC120102642small nucleolar RNA SNORA294120707367120707503Rat
1560552Eefseceukaryotic elongation factor, selenocysteine-tRNA-specific4120719616120915779Rat
41383162LOC120102335uncharacterized LOC1201023354120733062120737659Rat
68373Ruvbl1RuvB-like AAA ATPase 14120932486120967400Rat
1583218Rps25l3ribosomal protein S25 like 34120933765120934259Rat
68321Sec61a1SEC61 translocon subunit alpha 14120973519120987871Rat
1585999Kbtbd12kelch repeat and BTB domain containing 124121014636121088701Rat
71039Mgllmonoglyceride lipase4121192186121294187Rat
41199103Trnav-aac19transfer RNA valine (anticodon AAC) 194121218174121218246Rat
1359363Abtb1ankyrin repeat and BTB domain containing 14121299302121305667Rat
1305815Podxl2podocalyxin-like 24121306224121338070Rat
1305577Mcm2minichromosome maintenance complex component 24121346434121360962Rat
620858Tpra1transmembrane protein adipocyte associated 14121364093121375275Rat
7696532LOC102554942uncharacterized LOC1025549424121401011121454903Rat
7591615LOC102555035uncharacterized LOC1025550354121464929121479571Rat
7550029LOC102555094uncharacterized LOC1025550944121511450121516890Rat
1591392Prr20eproline rich 20E4121566632121574734Rat
41120855LOC120102337uncharacterized LOC1201023374121604758121615075Rat
41025378LOC120102338uncharacterized LOC1201023384121690045121700753Rat
41127828LOC120102339uncharacterized LOC1201023394121701048121712111Rat
41234562LOC120102340uncharacterized LOC1201023404121723881121732860Rat
1560871Plxna1plexin A14121737934121782901Rat
1304561Chchd6coiled-coil-helix-coiled-coil-helix domain containing 64121803501122024209Rat
41227538LOC120102655small nucleolar RNA SNORA484121944388121944517Rat
1308363Txnrd3thioredoxin reductase 34122072548122112493Rat
708509Vom1r90vomeronasal 1 receptor 904122139053122148056Rat
2323419Polr2m-ps3RNA polymerase II subunit M, pseudogene 34122141718122144244Rat
7512196Vom1r97l1vomeronasal 1 receptor 97 like 14122166102122172598Rat
1564573Vom1r92vomeronasal 1 receptor 924122212290122225494Rat
1549740Vom1r93vomeronasal 1 receptor 934122234616122242958Rat
1359098Vom1r94vomeronasal 1 receptor 944122274165122275145Rat
1359401Vom1r95vomeronasal 1 receptor 954122285444122286388Rat
2316391Vom1r-ps77vomeronasal 1 receptor pseudogene 774122311684122312578Rat
1549781Vom1r96vomeronasal 1 receptor 964122334287122335270Rat
708391Vom1r97vomeronasal 1 receptor 974122361863122364034Rat
2316390Vom1r-ps78vomeronasal 1 receptor pseudogene 784122370207122371034Rat
1549694Vom1r98vomeronasal 1 receptor 984122375967122376911Rat
2316389Vom1r-ps79vomeronasal 1 receptor pseudogene 794122394932122395749Rat
2316388Vom1r-ps80vomeronasal 1 receptor pseudogene 804122396580122396744Rat
1589006Vom1r99vomeronasal 1 receptor 994122430887122431711Rat
1549727Vom1r100vomeronasal 1 receptor 1004122468150122471495Rat
708395Vom1r101vomeronasal 1 receptor 1014122499102122500235Rat
708384Vom1r102vomeronasal 1 receptor 1024122537934122545602Rat
2316387Vom1r-ps81vomeronasal 1 receptor pseudogene 814122586021122586924Rat
2316386Vom1r-ps82vomeronasal 1 receptor pseudogene 824122595522122596518Rat
2316385Vom1r-ps83vomeronasal 1 receptor pseudogene 834122608252122609154Rat
2316384Vom1r-ps84vomeronasal 1 receptor pseudogene 844122613355122614266Rat
2316383Vom1r-ps85vomeronasal 1 receptor pseudogene 854122625876122626474Rat
41167200Vom1r114vomeronasal 1 receptor 11344122679045122680064Rat
2316382Vom1r-ps86vomeronasal 1 receptor pseudogene 864122686949122687878Rat
2316408Vom1r103vomeronasal 1 receptor 1034122723226122730713Rat
1587829Vom1r104vomeronasal 1 receptor 1044122768885122769850Rat
1587811C4h3orf22similar to human chromosome 3 open reading frame 224122817681122822175Rat
1562825Chst13carbohydrate sulfotransferase 134122824022122837940Rat
1587777Uroc1urocanate hydratase 14122844933122876584Rat
1561296ZxdcZXD family zinc finger C4122882389122914486Rat
1305768Cfap100cilia and flagella associated protein 1004122914693122938994Rat
70918Klf15KLF transcription factor 154122965718122978403Rat
621294Aldh1l1aldehyde dehydrogenase 1 family, member L14123059989123106471Rat
1589573Slc41a3solute carrier family 41, member 34123109555123154766Rat
1596313Iqsec1IQ motif and Sec7 domain ArfGEF 14123168719123488300Rat
41355210LOC120102710small nucleolar RNA SNORA174123361345123361441Rat
69339Nup210nucleoporin 2104123511558123609874Rat
1311706Hdac11histone deacetylase 114123645873123667407Rat
628685Fbln2fibulin 24123704289123763857Rat
69079Wnt7aWnt family member 7A4123863108123908981Rat
2316381Vom1r-ps87vomeronasal 1 receptor pseudogene 874123930673123931299Rat
1310746Chchd4coiled-coil-helix-coiled-coil-helix domain containing 44123968264123977398Rat
1549711Tmem43transmembrane protein 434123977680123992823Rat
1305760XpcXPC complex subunit, DNA damage recognition and repair factor4123993670124020922Rat
1305971Lsm3LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated4124021023124027269Rat
7539827LOC102548902uncharacterized LOC1025489024124160535124201206Rat
61912Slc6a6solute carrier family 6 member 64124195186124268880Rat
621668Grip2glutamate receptor interacting protein 24124271456124356538Rat
1305225Ccdc174coiled-coil domain containing 1744124392183124419035Rat
11410861Rps11-ps14ribosomal protein S11, pseudogene 144124395855124398410Rat
1560289C4h3orf20similar to human chromosome 3 open reading frame 204124422033124470657Rat
7553480LOC102554857uncharacterized LOC1025548574124441221124498179Rat
1305589Fgd5FYVE, RhoGEF and PH domain containing 54124497061124594564Rat
3201Nr2c2nuclear receptor subfamily 2, group C, member 24124610216124666813Rat
1308770Mrps25mitochondrial ribosomal protein S254124668320124680086Rat
1305397Rbsnrabenosyn, RAB effector4124682228124712578Rat
9301889LOC103692187uncharacterized LOC1036921874124712546124722083Rat
3903Trhthyrotropin releasing hormone4124742111124777094Rat
1306723Prickle2prickle planar cell polarity protein 24124869655125214862Rat
1306889Adamts9ADAM metallopeptidase with thrombospondin type 1 motif, 94125290633125462988Rat
7661237LOC102554570uncharacterized LOC1025545704125334112125359366Rat
40953411LOC120102343uncharacterized LOC1201023434125386934125418673Rat
7590189LOC102555978uncharacterized LOC1025559784125459772125773012Rat
41288887LOC120102344uncharacterized LOC1201023444125657909125684813Rat
41091722LOC120102670small nucleolar RNA SNORA174125861717125861845Rat
40993191LOC120102703small nucleolar RNA SNORA174126026597126026707Rat
1586441Rplp0-ps15ribosomal protein lateral stalk subunit P0, pseudogene 154126179018126180835Rat
1586025Magi1membrane associated guanylate kinase, WW and PDZ domain containing 14126205663126811354Rat
41162866Trnat-agu30transfer RNA threonine (anticodon AGU) 304126353506126353587Rat
41070385Snora44small nucleolar RNA, H/ACA box 444126415989126416119Rat
41132129Gabarap-ps3GABA type A receptor-associated protein, pseudogene 34126518341126548868Rat
2319160Dynll1l1dynein light chain LC8-type 1 like 14126581958126582522Rat
40930702LOC120102497uncharacterized LOC1201024974126723866126732961Rat
1585997Elob-ps12elongin B, pseduogene 124126816689126817049Rat
2320195Ssbp1-ps1single stranded DNA binding protein 1, pseudogene 14126884577126890225Rat
41394821LOC120102171uncharacterized LOC1201021714126995970126999766Rat
2323903Psma3-ps3proteasome 20S subunit alpha 3, pseudogene 34127029644127030164Rat
1308811Slc25a26solute carrier family 25 member 264127036704127131026Rat
1306788Lrig1leucine-rich repeats and immunoglobulin-like domains 14127130899127230956Rat
1590113Apool2apolipoprotein O-like 24127274472127275699Rat
41121964Cox6c-ps3cytochrome c oxidase subunit 6C, pseudogene 34127416018127417910Rat
11398915Trnal-aag2transfer RNA leucine (anticodon AAG) 24127454175127454256Rat
41018384Psmb3-ps2proteasome 20S subunit beta 3, pseudogene 24127536885127537501Rat
1563166Kbtbd8kelch repeat and BTB domain containing 84127675967127688785Rat
1586024Hnrnpa1-ps45heterogeneous nuclear ribonucleoprotein A1, pseudogene 454127704697127705507Rat
1583000Eef1g-ps15eukaryotic translation elongation factor 1 gamma, pseudogene 154127841801127847162Rat
1305008Suclg2succinate-CoA ligase GDP-forming subunit beta4128067031128337146Rat
1564292Nop2-ps4NOP2 nucleolar protein, pseudogene 44128479630128481920Rat
7643253Rrs1-ps7ribosome biogenesis regulator 1 homolog, pseudogene 74128616299128619872Rat
7508836LOC102549269uncharacterized LOC1025492694128652499128742024Rat
1563030Tafa1TAFA chemokine like family member 14128738028129244223Rat
11081189Nup50-ps1nucleoporin 50, pseudogene 14128787567128789296Rat
40949626LOC120102500uncharacterized LOC1201025004129086996129146558Rat
41335347Rnu6-131RNA, U6 small nuclear 1314129166306129166407Rat
41004547LOC120102499uncharacterized LOC1201024994129197518129420528Rat
1597443Tafa4TAFA chemokine like family member 44129437466129671320Rat
1359357EogtEGF domain specific O-linked N-acetylglucosamine transferase4129718897129756558Rat
620551Tmf1TATA element modulatory factor 14129759952129785705Rat
41011708LOC120102630small nucleolar RNA SNORA36 family4129770615129770745Rat
621084Uba3ubiquitin-like modifier activating enzyme 34129789526129810707Rat
708572Arl6ip5ADP-ribosylation factor like GTPase 6 interacting protein 54129810650129838628Rat
41263255LOC120102348uncharacterized LOC1201023484129815657129821673Rat
1564924Lmod3leiomodin 34129843964129858684Rat
620172Frmd4bFERM domain containing 4B4129895401130222070Rat
41178684Prune2-ps1prune homolog 2 with BCH domain, pseudogene 14130327921130328679Rat
41317950LOC120102724small nucleolar RNA SNORA174130392379130392510Rat
3092Mitfmelanocyte inducing transcription factor4130409020130621145Rat
2323009Mdfic2MyoD family inhibitor domain containing 24130845260130948054Rat
41327928Rnu6-433RNA, U6 small nuclear 4334131099002131099108Rat
1308669Foxp1forkhead box P14131559599132155092Rat
41126171LOC120102771small nucleolar RNA U34132053395132053495Rat
7669867LOC102555037uncharacterized LOC1025550374132153125132201203Rat
1586185Eif4e3eukaryotic translation initiation factor 4E family member 34132258502132301808Rat
71067Gpr27G protein-coupled receptor 274132328364132329497Rat
1561565Ier3ip1-ps1immediate early response 3 interacting protein 1, pseudogene 14132342131132342625Rat
620280Prok2prokineticin 24132346681132361754Rat
41337025LOC120102349uncharacterized LOC1201023494132466966132473095Rat
41233243LOC120102174macrophage migration inhibitory factor-like4132485219132485730Rat
9229745LOC103692198uncharacterized LOC1036921984132521989132539049Rat
41262491LOC120102350uncharacterized LOC1201023504132559007132560324Rat
11380835LOC108350738uncharacterized LOC1083507384132797064132799375Rat
1307077RybpRING1 and YY1 binding protein4132876260132928328Rat
40980164LOC120102351RING1 and YY1 binding protein4132876260132929075Rat
41024974LOC120102352uncharacterized LOC1201023524133042414133050061Rat
41314095LOC120102353uncharacterized LOC1201023534133100432133108825Rat
41140809LOC120102666small nucleolar RNA SNORA174133135428133135559Rat
41093674LOC120102354uncharacterized LOC1201023544133142571133164384Rat
1310610Shq1SHQ1, H/ACA ribonucleoprotein assembly factor4133213357133305586Rat
41162659Actg1-ps9actin, gamma 1, pseudogene 94133306869133313492Rat
1586482Gxylt2glucoside xylosyltransferase 24133347230133449708Rat
1307312Ppp4r2protein phosphatase 4, regulatory subunit 24133454555133495486Rat
7731047LOC102555697uncharacterized LOC1025556974133577659133647925Rat
11480110LOC108350739uncharacterized LOC1083507394133581761133598613Rat
41053760LOC120102356uncharacterized LOC1201023564133648139133660193Rat
41070524C18h18orf32-ps1similar to human chromosome 18 open reading frame 32, pseudogene 14133734357133734611Rat
1592353Smtn-ps1smoothelin, pseudogene 14133742253133744275Rat
1305250Pdzrn3PDZ domain containing RING finger 34133770736133996959Rat
41163084LOC120102358uncharacterized LOC1201023584133818078133839199Rat
41240645LOC120102176uncharacterized LOC1201021764134072462134077268Rat
11469179LOC108350740uncharacterized LOC1083507404134210738134238146Rat
41246601LOC120102177uncharacterized LOC1201021774134335166134338245Rat
1586021Tuba1b-ps2tubulin, alpha 1B, pseudogene 24134342304134343235Rat
1592322Rpl13-ps14ribosomal protein L13, pseudogene 144134558719134564121Rat
3253Cntn3contactin 34134841268135214460Rat
41352693LOC120102755U2 spliceosomal RNA4134969601134969762Rat
41127226LOC120102641small Cajal body-specific RNA 164135361243135361421Rat
41361992LOC120102607U6 spliceosomal RNA4135562032135562145Rat
40943387LOC120102178uncharacterized LOC1201021784135763696135765816Rat
11484912Rpl30-ps10ribosomal protein L30, pseudogene 104135972768135975698Rat
41072523LOC120102179uncharacterized LOC1201021794136171929136192655Rat
620122Chl1cell adhesion molecule L1-like4136291504136505830Rat
6492017Rpl4-ps2ribosomal protein L4, pseudogene 24136330114136331466Rat
41102695LOC120102611U7 small nuclear RNA4136623724136623786Rat
41351198LOC120102180uncharacterized LOC1201021804136636923136641514Rat
7565639LOC102549329uncharacterized LOC1025493294136745668136762242Rat
1585995Kpna1-ps6karyopherin subunit alpha 1, pseudogene 64136818724136820326Rat
1560353Rpl13-ps10ribosomal protein L13, pseudogene 104136905705136907969Rat
1586020G3bp1-ps8G3BP stress granule assembly factor 1, pseudogene 84136952803136954495Rat
41344928LOC120102718small nucleolar RNA SNORA174137032326137032442Rat
1563492Abcf2-ps2ATP binding cassette subfamily F member 2, pseudogene 24137093916137096351Rat
62008Cntn6contactin 64137354886137751712Rat
40983794LOC120102360uncharacterized LOC1201023604138620225138624508Rat
621361Cntn4contactin 44138624584139622499Rat
41223619LOC120102503uncharacterized LOC1201025034138789618138794102Rat
1586019Pgk1-ps9phosphoglycerate kinase 1, pseudogene 94139263587139265702Rat
41158046LOC120102501uncharacterized LOC1201025014139283893139296350Rat
41247159LOC120102502uncharacterized LOC1201025024139299748139305639Rat
70938Il5rainterleukin 5 receptor subunit alpha4139630652139664593Rat
1308857Trnt1tRNA nucleotidyl transferase 14139681115139703611Rat
41372663LOC120102573U6 spliceosomal RNA4139689094139689204Rat
1310533Crbncereblon4139701154139719949Rat
11479425Alg11-ps1ALG11, alpha-1,2-mannosyltransferase, pseudogene 14139862203139863619Rat
1589884Rps7-ps6ribosomal protein S7, pseudogene 64140380731140381276Rat
1564145Lrrn1leucine rich repeat neuronal 14140476752140520210Rat
40934392LOC120102689small nucleolar RNA SNORA174140680625140680738Rat
41284758Trnas-aga13transfer RNA serine (anticodon AGA) 134140797732140797813Rat
6487745Actg1-ps3actin, gamma 1, pseudogene 34140834718140835768Rat
1565882SetmarSET domain and mariner transposase fusion gene4141046058141058183Rat
1309939Sumf1sulfatase modifying factor 14141078735141160711Rat
2933Itpr1inositol 1,4,5-trisphosphate receptor, type 14141187377141554240Rat
7723051LOC102547466uncharacterized LOC1025474664141491266141542083Rat
11461811LOC108350742uncharacterized LOC1083507424141571301141599424Rat
68439Bhlhe40basic helix-loop-helix family, member e404141618453141624154Rat
41246146LOC120102361uncharacterized LOC1201023614141728281141747563Rat
1562830Arl8bADP-ribosylation factor like GTPase 8B4141748634141792605Rat
1563633Edem1ER degradation enhancing alpha-mannosidase like protein 14141797631141829717Rat
11400916LOC108350874uncharacterized LOC1083508744141940905141942281Rat
1586018Psmc4-ps3proteasome 26S subunit, ATPase 4, pseudogene 34142081325142082608Rat
41017193LOC120102762U2 spliceosomal RNA4142280446142280654Rat
40996046LOC120102553U4 spliceosomal RNA4142973965142974049Rat
11358358LOC108350743uncharacterized LOC1083507434143321781143331269Rat
619857Grm7glutamate metabotropic receptor 74143730862144613230Rat
41180729LOC120102601U6 spliceosomal RNA4144143261144143356Rat
41219320LOC120102505cyclin-dependent kinases regulatory subunit 2-like4144220612144220990Rat
41166573Snu13-ps2small nuclear ribonucleoprotein 13, pseudogene 24144510658144511761Rat
41317445LOC120102593U6 spliceosomal RNA4144668340144668444Rat
41066235Eef1a1-ps16eukaryotic translation elongation factor 1 alpha 1, pseudogene 164145130360145132187Rat
1308963Lmcd1LIM and cysteine-rich domains 14145393153145452049Rat
1562010Ssuh2ssu-2 homolog4145502942145521881Rat
2281Cav3caveolin 34145582168145598142Rat
3239Oxtroxytocin receptor4145598549145614674Rat
1306993Rad18RAD18 E3 ubiquitin protein ligase4145735654145821102Rat
7609120LOC102548080uncharacterized LOC1025480804145820794145887127Rat
1563152Srgap3SLIT-ROBO Rho GTPase activating protein 34145839369146070556Rat
41196182LOC120102769small nucleolar RNA U34146088309146088519Rat
7623898LOC102548337uncharacterized LOC1025483374146168757146185408Rat
1560852Thumpd3THUMP domain containing 34146185422146209802Rat
41216201LOC120102586U6 spliceosomal RNA4146200474146200580Rat
6491660Thumpd3-as1THUMPD3 antisense RNA 14146210520146217026Rat
1310433Setd5SET domain containing 54146217172146294896Rat
41393297Trnap-agg26transfer RNA proline (anticodon AGG) 264146300941146301014Rat
727967Lhfpl4LHFPL tetraspan subfamily member 44146317110146340073Rat
1304842Mtmr14myotubularin related protein 144146386949146429990Rat
1309212Cpne9copine family member 94146429961146454335Rat
1584828Brpf1bromodomain and PHD finger containing, 14146456325146472781Rat
621168Ogg18-oxoguanine DNA glycosylase4146474701146481959Rat
629473Camk1calcium/calmodulin-dependent protein kinase I4146481196146492039Rat
2319531Cct3-ps6chaperonin containing TCP1 subunit 3, pseudogene 64146490625146500878Rat
2319475Ggact-ps2gamma-glutamylamine cyclotransferase, pseudogene 24146504023146505562Rat
1564009Tada3transcriptional adaptor 34146510213146521975Rat
41403052LOC120102750U2 spliceosomal RNA4146511607146511797Rat
1310096Arpc4actin related protein 2/3 complex, subunit 44146522255146532784Rat
1311255Ttll3tubulin tyrosine ligase like 34146532958146558425Rat
1307582Rpusd3RNA pseudouridine synthase D34146553743146562789Rat
7499834LOC102548450uncharacterized LOC1025484504146564239146568426Rat
1562113Cideccell death-inducing DFFA-like effector c4146569288146582173Rat
2319333Apoo-ps2apolipoprotein O, pseudogene 24146587525146589978Rat
1565488Jagn1jagunal homolog 14146591577146596287Rat
41402055LOC120102752U2 spliceosomal RNA4146594912146595102Rat
735148Il17reinterleukin 17 receptor E4146604547146618206Rat
1306392Il17rcinterleukin 17 receptor C4146618321146631444Rat
1309412Creld1cysteine-rich with EGF-like domains 14146631883146641493Rat
1562419Prrt3proline-rich transmembrane protein 34146641173146650487Rat
1311566Emc3ER membrane protein complex subunit 34146663065146678976Rat
1303172Fancd2FA complementation group D24146679014146743422Rat
1565997Fancd2osFANCD2 opposite strand4146740863146747547Rat
1598136Brk1BRICK1 subunit of SCAR/WAVE actin nucleating complex4146750821146766050Rat
3960Vhlvon Hippel-Lindau tumor suppressor4146772483146779376Rat
1309584Irak2interleukin-1 receptor-associated kinase 24146786004146842615Rat
41146337LOC120102364uncharacterized LOC1201023644146787484146795910Rat
1586017Tatdn2TatD DNase domain containing 24146845156146865708Rat
632283Ghrlghrelin and obestatin prepropeptide4146865712146869621Rat
1359555Sec13SEC13 homolog, nuclear pore and COPII coat complex component4146877739146891130Rat
2176Atp2b2ATPase plasma membrane Ca2+ transporting 24146894602147208060Rat
41203173LOC120102365uncharacterized LOC1201023654147065997147066964Rat
11380647LOC108350745uncharacterized LOC1083507454147262869147277704Rat
628737Slc6a11solute carrier family 6 member 114147297972147413319Rat
620533Slc6a1solute carrier family 6 member 14147448961147482295Rat
7575330LOC102548867uncharacterized LOC1025488674147482960147497153Rat
2830Hrh1histamine receptor H 14147564963147649353Rat
41382729LOC120102366uncharacterized LOC1201023664147575390147578136Rat
40972096LOC120102367endogenous retrovirus group K member 21 Env polyprotein-like4147699712147708407Rat
1304817Atg7autophagy related 74147718663147925656Rat
41039995LOC120102368uncharacterized LOC1201023684147735944147739532Rat
1311653Vgll4vestigial-like family member 44147925630148038519Rat
41261845LOC120102369uncharacterized LOC1201023694147944627147947997Rat
1586150Tamm41TAM41 mitochondrial translocator assembly and maintenance homolog4148070388148103728Rat
3798Syn2synapsin II4148178846148347010Rat
2319464Edf1-ps2endothelial differentiation-related factor 1, pseudogene 24148247091148258212Rat
6491335Tuba1b-ps4tubulin, alpha 1B, pseudogene 44148253286148254718Rat
69077Timp4TIMP metallopeptidase inhibitor 44148306021148312558Rat
41143089LOC120102740small nucleolar RNA SNORA764148319434148319561Rat
3371Ppargperoxisome proliferator-activated receptor gamma4148423102148548471Rat
1309946Tsen2tRNA splicing endonuclease subunit 24148602805148638219Rat
2320714Mkrn2osMKRN2 opposite strand4148644489148653396Rat
1310618Mkrn2makorin, ring finger protein, 24148661529148679580Rat
3531Raf1Raf-1 proto-oncogene, serine/threonine kinase4148679534148740265Rat
41002253LOC120102730small nucleolar RNA SNORA174148787387148787491Rat
1587025Tmem40transmembrane protein 404148791509148819287Rat
620480Cand2cullin-associated and neddylation-dissociated 2 (putative)4148835050148864039Rat
41332887Trnaa-agc42transfer RNA alanine (anticodon AGC) 424148841925148842005Rat
621203Rpl32ribosomal protein L324148864048148867612Rat
41348576LOC120102637small nucleolar RNA SNORA74148866843148866982Rat
1586985Efcab12EF-hand calcium binding domain 124148869381148892922Rat
1585874Mbd4methyl-CpG binding domain 4 DNA glycosylase4148893049148904833Rat
1311302Ift122intraflagellar transport 1224148905031148975458Rat
3573Rhorhodopsin4148975597148988693Rat
1566236H1f8H1.8 linker histone4148993133148998254Rat
1310796Plxnd1plexin D14149002786149043097Rat
1311909Tmcc1transmembrane and coiled-coil domain family 14149069252149239585Rat
1592944Ssbl1small RNA binding exonuclease protection factor La like 14149078162149079669Rat
735230Washc2cWASH complex subunit 2C4149267851149325850Rat
11384346Rpl9-ps19ribosomal protein L9, pseudogene 194149309307149310333Rat
628707Zfand4zinc finger AN1-type containing 44149327339149399495Rat
1309339Marchf8membrane associated ring-CH-type finger 84149415642149530771Rat
1591759Rpl23al6ribosomal protein L23A like 64149492385149492849Rat
2096Alox5arachidonate 5-lipoxygenase4149531329149578696Rat
41121481Trnap-ggg3transfer RNA proline (anticodon GGG) 34149560503149560583Rat
1333902Or13a1olfactory receptor family 13 subfamily A member 14149602129149610213Rat
1333048Or6d12olfactory receptor family 6 subfamily D member 124149648444149649427Rat
1333814Or6d13bolfactory receptor family 6 subfamily D member 13B4149673586149674569Rat
1332818Or6d13olfactory receptor family 6 subfamily D member 134149696014149696997Rat
1332631Or6d12bolfactory receptor family 6 subfamily D member 12B4149717772149718755Rat
1586016Hsp90aa1-ps14heat shock protein 90 alpha family class A member 1, pseudogene 144149745787149748099Rat
1333047Or6d13colfactory receptor family 6 subfamily D member 13C4149752294149753277Rat
1585993Ppp1r15b-ps1protein phosphatase 1, regulatory subunit 15B, pseudogene 14149756752149759826Rat
1332875Or6d12colfactory receptor family 6 subfamily D member 12C4149777747149778730Rat
1334034Or6d14olfactory receptor family 6 subfamily D member 144149793474149794436Rat
1333628Or6d15olfactory receptor family 6 subfamily D member 154149818596149819528Rat
1333171Or6d15bolfactory receptor family 6 subfamily D member 15B4149839430149840362Rat
11489696Trnac-gca29transfer RNA cysteine (anticodon GCA) 294149848557149848628Rat
620229Zfp422zinc finger protein 4224149885805149893287Rat
1307785Rassf4Ras association domain family member 44149897525149932658Rat
1565700Depp1DEPP autophagy regulator 14149910794149913013Rat
1308850Tmem72transmembrane protein 724149946296149973550Rat
41351797LOC120102672small nucleolar RNA SNORA174150004608150004742Rat
41188358LOC120102768U2 spliceosomal RNA4150054525150054694Rat
1560120Akr1b1-ps2aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 24150078484150079434Rat
41392789C4h9orf85similar to human chromosome 9 open reading frame 854150205867150206875Rat
11463298LOC108350876uncharacterized LOC1083508764150306396150319990Rat
3651Cxcl12C-X-C motif chemokine ligand 124150388326150401173Rat
41354715LOC120102371uncharacterized LOC1201023714150423574150431401Rat
7749382LOC102548743uncharacterized LOC1025487434150498770150548561Rat
40976786LOC120102649small nucleolar RNA SNORA484150527373150527515Rat
1596703Ube2m-ps1ubiquitin-conjugating enzyme E2M, pseudogene 14150686815150745259Rat
41109424LOC120102372uncharacterized LOC1201023724150812902150819415Rat
1563294Eno1-ps20enolase 1, pseudogene 204150927402150929143Rat
41340890LOC120102373uncharacterized LOC1201023734150943127150952907Rat
1559850Zfp637zinc finger protein 6374150984940151010079Rat
41401598LOC120102374uncharacterized LOC1201023744150988154150999023Rat
6502210Zfp239zinc finger protein 2394151029431151039283Rat
41036133LOC120102375uncharacterized LOC1201023754151066816151075877Rat
620366Hnrnpfheterogeneous nuclear ribonucleoprotein F4151083262151104464Rat
70998Fxyd4FXYD domain-containing ion transport regulator 44151109779151113659Rat
1583233H2az2l1H2A.Z histone variant 2 like 14151152904151153567Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10156D4Mit181854131730729131730924Ratregion
10157D4Wox171574131730755131730914Ratregion
10158D4Arb162514131730738131730991Ratregion
10513D4Arb63064118050728118051034Ratregion
33933D4Mit161144128289450128289560Ratregion
33995D4Mit191454146565735146565864Ratregion
34001D4Mit171474132642577132642728Ratregion
34023D4Mit291364117809401117809515Ratregion
34106D4Mgh61654133370903133371042Ratregion
34174D4Mgh71434138503169138503340Ratregion
34256D4Mgh181244126395976126396065Ratregion
34308D4Mgh91194149491524149491645Ratregion
34367D4Mgh81064146446565146446691Ratregion
34435D4Mgh191504148883823148883965Ratregion
11409D4Wox181134118699850118699963Ratregion
11410D4Arb52474118699819118700066Ratregion
36029D4Rat511704120093877120094047Ratregion
36043D4Rat491524117764993117765145Ratregion
36143D4Rat601194146803311146803430Ratregion
36175D4Rat531924124380585124380778Ratregion
36271D4Rat811424139028970139029107Ratregion
36368D4Mit324116200971116201124Ratregion
37214D4Rat1052284126278101126278340Ratregion
37592D4Rat1411934148090542148090731Ratregion
35262D4Rat791584129854502129854654Ratregion
35276D4Rat831414149368097149368240Ratregion
35278D4Rat462994120926564120926865Ratregion
35310D4Rat451644119925288119925452Ratregion
35315D4Rat821364142041324142041467Ratregion
36898D4Rat801244130142051130142186Ratregion
37100D4Rat522344125920192125920418Ratregion
37850D4Rat1041514137755016137755168Ratregion
36508D4Rat482134123143783123143996Ratregion
36725D4Rat781604116553490116553633Ratregion
34902D4Rat551754126192368126192555Ratregion
35003D4Rat501364118313054118313190Ratregion
35046D4Rat583624133821995133822342Ratregion
35070D4Rat571884132326984132327165Ratregion
35088D4Rat591804147278504147278687Ratregion
35635D4Rat541714120102454120102625Ratregion
35777D4Rat611664150265910150266063Ratregion
39634D4Rat1852364125064558125064778Ratregion
39768D4Rat1831384123717924123718054Ratregion
39930D4Rat1881334127252528127252665Ratregion
38074D4Rat1212324131435943131436173Ratregion
38344D4Rat1061544116179486116179656Ratregion
38360D4Rat1201864116786396116786582Ratregion
40642D4Rat1952154141356262141356469Ratregion
40642D4Rat1952154141356262141356570Ratregion
40748D4Rat1983164148470094148470394Ratregion
38412D4Rat882394130018906130019145Ratregion
38458D4Rat951204129149351129149473Ratregion
38590D17Rat772174138998642138998682Ratregion
40286D4Rat197974149614933149615026Ratregion
38866D4Rat872094127056296127056497Ratregion
38998D4Rat922224129998172129998394Ratregion
39158D4Rat11414120699429120699558Ratregion
39162D4Rat1162344130492986130493224Ratregion
42152D4Arb223184124264787124265103Ratregion
42308D4Rat2901344117123710117123846Ratregion
42712D4Rat2342414123802452123802675Ratregion
42716D4Rat2732384131508575131508837Ratregion
42719D4Rat2371434133675946133676093Ratregion
42720D4Rat2742184139648159139648368Ratregion
42721D4Rat2382004139725403139725596Ratregion
42722D4Rat2393264140371931140372255Ratregion
42723D4Rat2752434143083544143083794Ratregion
42724D4Rat2402144145325821145326050Ratregion
41154D4Rat1992034149425650149425853Ratregion
41232D4Rat1821414120260281120260420Ratregion
41362D10Rat1691554132570401132570548Ratregion
41456D4Rat1791554116601436116601590Ratregion
41500D4Rat1961514141235569141235720Ratregion
41502D4Rat1871464123826662123826812Ratregion
42711D4Rat2692294121132485121132697Ratregion
40878D4Rat1841034118928273118928386Ratregion
40974D4Rat1862014125121436125121651Ratregion
41568D4Rat2001264151161140151161268Ratregion
41594D4Rat1902564129812526129812798Ratregion
41616D4Rat1931574135850004135850165Ratregion
41796D4Rat2361364127263958127264101Ratregion
43823D4Got881344116899150116899282Ratregion
43825D4Got1491444116809187116809331Ratregion
43826D4Got851294119615498119615629Ratregion
43827D4Got841504120000469120000619Ratregion
43829D4Got832314121139726121139954Ratregion
43830D4Got1481564120926546120926704Ratregion
43831D4Got821174123154343123154460Ratregion
43832D4Got931604126848713126848873Ratregion
43833D4Wox21474127437973127438130Ratregion
43833D4Wox21474143010164143010230Ratregion
43834D4Got982884131073658131073946Ratregion
43835D4Got941474129193486129193635Ratregion
43836D4Got95994129302326129302425Ratregion
43837D4Got150884129667204129667292Ratregion
43840D4Got1072934138945369138945662Ratregion
43841D4Got1601494145683146145683295Ratregion
43842D4Got1191514145399780145399931Ratregion
43845D4Got1171864144948937144949123Ratregion
43849D4Got116874144957334144957421Ratregion
43851D4Got1142154142610413142610628Ratregion
43853D4Wox11054136784053136784169Ratregion
43855D4Got1061534137673168137673321Ratregion
43856D4Got1242884148190092148190377Ratregion
43857D4Got1251134146073937146074052Ratregion
43858D4Got1232484148519843148520091Ratregion
60463D4Got861884119620464119620654Ratregion
60464D4Got872424117107756117107998Ratregion
60466D4Got902904118664949118665239Ratregion
60467D4Got912404118509866118510108Ratregion
60468D4Got921524117056959117057111Ratregion
60469D4Got961944129960443129960637Ratregion
60405D4Got1002024133675945133676147Ratregion
60406D4Got1011414136063094136063235Ratregion
60407D4Got1031524137934748137934900Ratregion
60408D4Got1051384139745505139745643Ratregion
60411D4Got1212474147246387147246636Ratregion
625808D4Got1041024139080774139080874Ratregion
625812D4Got1611854117010196117010381Ratregion
62477D4Uia11784119777225119777404Ratregion
62517D4Uia91704124915758124915928Ratregion
67765D4Uwm21644131873209131873379Ratregion
1630882D4Got2741904119277682119277872Ratregion
1630987D4Got2561844117022038117022224Ratregion
1631230D4Got2292554124746726124746984Ratregion
1628639D4Got2671624121063505121063667Ratregion
1628786D4Got2531494120656434120656583Ratregion
1639172D4Wox431594145618389145618548Ratregion
1641048D4Got3112394144996142144996430Ratregion
1641048D4Got3112394144996191144996430Ratregion
1641089D4Wox562944124194958124195252Ratregion
1641271D4Got2281914119910995119911182Ratregion
1641661D4Uia132234120633208120633431Ratregion
1633142D4Got2661874132308431132308618Ratregion
1633220D4Got2581674132700379132700546Ratregion
1633603D4Got2981304123069574123069704Ratregion
1640297D4Got2301494131890768131890919Ratregion
1634885D4Wox521704150397157150397328Ratregion
1635138D4Got2321214136289819136289940Ratregion
1635906D4Cebr42114118686099118686310Ratregion
1636680D4Wox441394141623426141623565Ratregion
1636685D4Got2341914144208084144208275Ratregion
1636836D4Got2611434117134643117134786Ratregion
1636959D4Got2511414146873645146873771Ratregion
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5082459BE1194731514149885137149885288Ratregion
5085579BQ2111052034116684937116685140Ratregion
5090681AU0498971884122865191122865379Ratregion
5090855AU0500061124151065250151065362Ratregion
5080806RH1417932124151007590151007802Ratregion
5080874RH1418332064123107234123107440Ratregion
5090425AU0497431764121153246121153424Ratregion
5090613AU0498571314147265968147266101Ratregion
5088723AU0487391164124045167124045283Ratregion
5088731AU0487461714131460368131460539Ratregion
5088899AU0488362484120827695120827941Ratregion
5081100RH1419652134124628136124628349Ratregion
5081128RH1419812114146861336146861547Ratregion
5090135AU0495702914126909599126909890Ratregion
5089075AU0489401464119228457119228605Ratregion
5082673BE1199791604123653032123653192Ratregion
5081020RH1419182094119097380119097589Ratregion
5084476AA8504811514128067126128067277Ratregion
5082753BF3900211234117405991117406114Ratregion
5081222RH1420352204122901435122901655Ratregion
5081308RH1420851904146263612146263802Ratregion
5081346UniSTS:2261511824117731352117731534Ratregion
5085010AI2297721224148619650148619772Ratregion
5083083BI2751072004124665111124665311Ratregion
5083233BG3803312314126728933126729164Ratregion
5081689BF4080771004146865461146865561Ratregion
5086781AA9648031874149002814149003001Ratregion
5083755AI2299832044148431745148431949Ratregion
5083819AA8008782304145735817145736047Ratregion
5083958AI0120881464148868008148868313Ratregion
5083980AI2323511174119141273119141390Ratregion
5502859Cxcl1211194150393531150394650Ratregion
5503107CCT71064118003931118004576Ratregion
5503146RAB7A784120467340120468086Ratregion
5503328UniSTS:238061884146518727146518918Ratregion
5503585UniSTS:4646631164117054705117054821Ratregion
5504510PMC262394P11274146865824146866894Ratregion
5504512PMC262394P304146868795146869548Ratregion
5504662PMC33279P14604133310167133310617Ratregion
5504268G436641284146894612146894740Ratregion
5504274D2S1554E2504118973700118973950Ratregion
5504288D3S2930E1934146898106146898299Ratregion
5504652PMC327172P12814120651590120651871Ratregion
5504811ha210216974141704357141706054Ratregion
5504869ha271704145300255145300814Ratregion
5505414Oxtr6624145613875145614537Ratregion
5505460Prok2664132348155132348221Ratregion
5505486G197171654132876338132876503Ratregion
5505229Aldh1l1684123078906123078974Ratregion
5505261Hnrnpf3254151103480151103805Ratregion
5505186Mbd42004148897195148897395Ratregion
5505622UniSTS:48678214994133083451133084950Ratregion
5505626UniSTS:48763811344132328363132329497Ratregion
5505544D12S20449644121304226121305190Ratregion
5505786UniSTS:49324111344132328363132329497Ratregion
5505822UniSTS:49555010484122168346122169394Ratregion
5505935UniSTS:49661912814130586060130587341Ratregion
5506242TXP2087544121529818121530572Ratregion
5506473AFM342xc104131050442131051010Ratregion
5506533GRM7_13887684144612440144613208Ratregion
5506437UniSTS:4793056004116467421116468021Ratregion
5506441UniSTS:4792816604149078400149079060Ratregion
5507047UniSTS:2242371814142168020142168201Ratregion
5507107UniSTS:2245851954120303411120303607Ratregion
5507057UniSTS:2242782054123543954123544159Ratregion
5499593G66214784146254556146254634Ratregion
5500563RH1359991454146663423146663568Ratregion
5500581RH1360641464118872930118873076Ratregion
5499909UniSTS:2354952114123171312123171523Ratregion
5499911UniSTS:2354961374123724546123724683Ratregion
5500021UniSTS:2362041104120319710120319820Ratregion
5501005PMC117179P16974146514035146514732Ratregion
5501640UNH10423114123870702123871013Ratregion
5500178D6Mit1417304147171223147171953Ratregion
5499839UniSTS:2349592354116294332116294567Ratregion
5499915UniSTS:2354822074118005695118006215Ratregion
5499917UniSTS:2355232094146778951146779160Ratregion
5503752UniSTS:4698195374148679655148680192Ratregion
5501035PMC124275P24704120462854120463324Ratregion
5501253PMC170950P13904145613871145614261Ratregion
5501414Ogg104146478876146480164Ratregion
5501594RH369058854124015064124015949Ratregion
5504171Raf12614148694134148694684Ratregion
5504490PMC23053P21104146772705146772815Ratregion
5504704PMC58532P12444120665358120666068Ratregion
5501534RH468973694129422482129422851Ratregion
5501622REN62H019764132832789132833761Ratregion
5501798MARC_12813-12814:999878148:11664116283157116283961Ratregion
5502134MARC_5405-5406:996690354:1634126179895126179958Ratregion
5502936Srgap311204145839739145840859Ratregion
5502243AI3156818124118226192118227004Ratregion
5502409RH1247491514120303077120303228Ratregion
11565149D4Nirs22244120254905120255132Ratregion
11565154D4Nirs82084120612774120612983Ratregion
Position Markers

Flank 1: (D4Rat106)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24116,179,486 - 116,179,656 (+)MAPPER
Rnor_6.04115,372,758 - 115,372,927NCBI
Rnor_5.04179,959,725 - 179,959,894UniSTS
RGSC_v3.44117,887,605 - 117,887,968RGD
RGSC_v3.44117,887,667 - 117,887,836UniSTS
RGSC_v3.14118,132,148 - 118,132,317RGD
Celera4105,172,088 - 105,172,257UniSTS
RH 3.4 Map4666.0UniSTS
RH 3.4 Map4666.0RGD
RH 2.0 Map4690.4RGD
SHRSP x BN Map450.99RGD
FHH x ACI Map463.56RGD
Peak: (D4Mgh7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24138,503,169 - 138,503,340 (+)MAPPER
Rnor_6.04136,351,734 - 136,351,904NCBI
Rnor_6.04137,666,258 - 137,666,428NCBI
Rnor_5.04200,825,021 - 200,825,191UniSTS
Rnor_5.04202,136,403 - 202,136,573UniSTS
Celera4127,232,095 - 127,232,265UniSTS
RH 3.4 Map4856.5RGD
RH 3.4 Map4856.5UniSTS
RH 2.0 Map4920.4RGD
SHRSP x BN Map463.48RGD
Cytogenetic Map4 RGD
Flank 2: (D4Rat200)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24151,161,140 - 151,161,268 (+)MAPPER
Rnor_6.04150,038,157 - 150,038,284NCBI
Rnor_5.04215,965,957 - 215,966,084UniSTS
RGSC_v3.44154,283,841 - 154,283,969RGD
RGSC_v3.44154,283,842 - 154,283,969UniSTS
RGSC_v3.14154,528,682 - 154,528,810RGD
Celera4140,035,775 - 140,035,902UniSTS
SHRSP x BN Map473.6199RGD
SHRSP x BN Map473.6199UniSTS
Cytogenetic Map4q42UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
61446Coreg2Compensatory renal growth QTL 23.5kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)4148423102157580971Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
631556Bp135Blood pressure QTL 1350.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)478881294117676292Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
1549827Scl46Serum cholesterol level QTL 463.5blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)4132396220177396220Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4125590636170590636Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4145568712182687754Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
724522Bp146Blood pressure QTL 1462.20.0021arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)473630210118630210Rat
61476Aia3Adjuvant induced arthritis QTL 33.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)486730991131730991Rat
2303623Vencon2Ventilatory control QTL 23.8respiration trait (VT:0001943)minute ventilation (CMO:0000132)4135204660180204660Rat
1641919Alc22Alcohol consumption QTL 220.0005drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)481192555126192555Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4135699135180699135Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
1578670Bss14Bone structure and strength QTL 1416.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)487327165132327165Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
70201Gcr1Gastric cancer resistance QTL 12.7stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)4120260281147278687Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4137755016181392681Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
724535Cm18Cardiac mass QTL 182.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)4118856416163856416Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
1578662Bss15Bone structure and strength QTL 1519.6femur width (VT:1000666)femoral neck width (CMO:0001695)487327165132327165Rat
2302051Pia28Pristane induced arthritis QTL 285.30.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)473630210118630210Rat
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
738015Pia9Pristane induced arthritis QTL 94.50.048joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)480694870125694870Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
631646Stl4Serum triglyceride level QTL 46.50.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)473169846132642728Rat
634334Xhs3X-ray hypersensitivity QTL 310intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)484728680129854654Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4124778595169778595Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4123143783168143783Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
631662Hcar2Hepatocarcinoma resistance QTL 23.10.0003liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)478878504123878504Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
61418Pia5Pristane induced arthritis QTL 54.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)462277855128289560Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
61422Cia13Collagen induced arthritis QTL 134.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4132642577167139601Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4146565735175236377Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)456698790126192555Rat
2306899Bp338Blood pressure QTL 3380.071arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)481006124120102625Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
2293840Kiddil9Kidney dilation QTL 92.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)4120926564148090731Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat
12798523Anxrr56Anxiety related response QTL 562.830.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)485253748150276390Rat
61434Cia3Collagen induced arthritis QTL 34.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4103194656148194656Rat
12798527Anxrr58Anxiety related response QTL 584.110.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4119463257147278687Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
12798525Anxrr57Anxiety related response QTL 573.210.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4147278504167139601Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Hrtrt5


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Hrtrt5  Heart rate QTL 5  Hr5    Symbol updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_general additional information, including phenotype and mapping information, can be found at Genomic Map of Cardiovascular Phenotypes 727992
qtl_general mean heart rate averaged over 3 hours from rats on high salt diet (scor30) 727992