RA20_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: RA20_H (Rheumatoid arthritis QTL 20 (human)) Homo sapiens

Symbol: RA20_H
Name: Rheumatoid arthritis QTL 20 (human)
RGD ID: 1298480
Trait: Joint/bone inflammation
Measurement Type: rheumatoid arthritis
LOD Score: Not Available
P Value: 0.0031
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37124,015,103 - 30,015,103RGDGRCh37
Build 36123,906,370 - 29,906,370RGDNCBI36
Build 34121,806,195 - 31,806,195RGD
Cross Type: Not Available
Population Stats: affected sib pairs from the United States gathered by the North American Rheumatoid Arthritis Consortium



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Arthritis  (QTM)
References

Related QTLs

Related QTL Description Reference
Oia2 maps to syntenic region RGD:629560
Oia8 maps to syntenic region RGD:629560


Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D12S373)
Human AssemblyChrPosition (strand)Source
GRCh371217,014,998 - 17,015,209UniSTS
Build 361216,906,265 - 16,906,476RGD
Celera1222,158,786 - 22,158,997RGD
HuRef1216,783,665 - 16,783,880UniSTS
Marshfield Genetic Map1236.06UniSTS
Marshfield Genetic Map1236.06RGD
TNG Radiation Hybrid Map127123.0UniSTS
deCODE Assembly Map1235.32UniSTS
Stanford-G3 RH Map12917.0UniSTS
Whitehead-RH Map12143.4UniSTS
Whitehead-YAC Contig Map12 UniSTS
NCBI RH Map12194.1UniSTS


Additional Information

Database Acc Id Source(s)
NCBI Gene RA20_H
OMIM 180300

RGD Curation Notes
Note Type Note Reference
qtl_general much higher level of significance among families who tested seropositive for rheumatoid factor 738125
qtl_population affected sib pairs from the United States gathered by the North American Rheumatoid Arthritis Consortium 738125
qtl_population_details genomewide scans were conducted from 257 families, containing 301 sibling pairs, from the United States; mean age of disease onset was 39.0 years; 90% of families were white 738125
qtl_statistics_details nonparametric linkage analysis performed using SIBPAL from SAGE version 3.1 738125