Bp402 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp402 (Blood pressure QTL 402) Rattus norvegicus

Symbol: Bp402
Name: Blood pressure QTL 402
RGD ID: 12879863
Previously known as: BpC2QTL4
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: mean arterial blood pressure   (CMO:0000009)    
LOD Score: Not Available
P Value: 0.003
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2241,125,789 - 56,532,139RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0241,063,439 - 56,736,627RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0260,126,669 - 76,472,773RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4240,912,197 - 56,722,286RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: SS.LEW-(D2Rat18-D2Chm277)/Ayd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Distinct quantitative trait loci for kidney, cardiac, and aortic mass dissociated from and associated with blood pressure in Dahl congenic rats. Duong C, etal., Mamm Genome. 2006 Dec;17(12):1147-61. Epub 2006 Dec 1.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
68401Gzmkgranzyme K24484081144848829Rat
3281Pde4dphosphodiesterase 4D24001493341529190Rat
2238C6complement C625384602753921279Rat
61957Isl1ISL LIM homeobox 124807941248090704Rat
70970Hmgcs13-hydroxy-3-methylglutaryl-CoA synthase 125164936851667100Rat
2633Fstfollistatin24612326046130584Rat
619937Ccl28C-C motif chemokine ligand 2825160135451625999Rat
3387Prkaa1protein kinase AMP-activated catalytic subunit alpha 125424029854275978Rat
2687Ghrgrowth hormone receptor25254145252804960Rat
2923Itga1integrin subunit alpha 124664612546812237Rat
621007Dab2DAB adaptor protein 225551469255567476Rat
620688Hcn1hyperpolarization-activated cyclic nucleotide-gated potassium channel 124949577149899702Rat
621431LifrLIF receptor subunit alpha25622439356292988Rat
68345Hspb3heat shock protein family B (small) member 324529528545295999Rat
620760Plk2polo-like kinase 224196917641974945Rat
621832Plpp1phospholipid phosphatase 124443900244500430Rat
628640Gzmagranzyme A24474063844752471Rat
621632Itga2integrin subunit alpha 224652034546621487Rat
2606Fgf10fibroblast growth factor 1025080189750875428Rat
620923Rab3cRAB3C, member RAS oncogene family24162772041843541Rat
621067Embembigin24907050949125042Rat
620966Map3k1mitogen-activated protein kinase kinase kinase 124334857243414706Rat
2903Il6stinterleukin 6 cytokine family signal transducer24406597944106255Rat
1305805Card6caspase recruitment domain family, member 625419434354206902Rat
628641Ptger4prostaglandin E receptor 425433056354347451Rat
620319C9complement C925557309455621345Rat
620318C7complement C725408811654165102Rat
1307506Gpx8glutathione peroxidase 824467644844680042Rat
71013Esm1endothelial cell-specific molecule 124487606744884805Rat
1306592EgflamEGF-like, fibronectin type III and laminin G domains25630194556476665Rat
3660Selenopselenoprotein P25249812352508409Rat
1302983Osmroncostatin M receptor25590711955961373Rat
1307580Fbxo4F-box protein 425317479853187792Rat
1307735Ankrd55ankyrin repeat domain 5524388387743983820Rat
1305984MtrexMtr4 exosome RNA helicase24450032644560624Rat
1305413Mroh2bmaestro heat-like repeat family member 2B25400387054063992Rat
1307224RictorRPTOR independent companion of MTOR, complex 225581187755903893Rat
1310367Snx18sorting nexin 1824523232545258345Rat
1309697Mrps30mitochondrial ribosomal protein S3025045625350463128Rat
1311881Slc38a9solute carrier family 38, member 924429163744374897Rat
1560402RGD1560402similar to Phosphoglycerate kinase 124275460542755929Rat
1305668Paip1poly(A) binding protein interacting protein 125152314251550241Rat
1305938Rimoc1RAB7A interacting MON1-CCZ1 complex subunit 125318978753203981Rat
1308793Ddx4DEAD-box helicase 424422794644282867Rat
1305492Gpbp1GC-rich promoter binding protein 124302350443091146Rat
1306227C2h5orf34similar to human chromosome 5 open reading frame 3425155322351577090Rat
1307638Zfp131zinc finger protein 13125172277451753662Rat
1308448Plcxd3phosphatidylinositol-specific phospholipase C, X domain containing 325356702253746384Rat
1309504Actbl2actin, beta-like 224285802042860767Rat
1311241Mier3MIER family member 324328754643316422Rat
1560484Rpl4-ps6ribosomal protein L4, pseudogene 625498492954986241Rat
1562550Tmem267transmembrane protein 26725158021051588937Rat
1561503Ccdc152coiled-coil domain containing 15225250798752532880Rat
1561520RGD1561520similar to Ab2-16225139226551393293Rat
1565217Ccnocyclin O24463064044633914Rat
1359591Pelopelota mRNA surveillance and ribosome rescue factor24679785346799621Rat
1564042Ttc33tetratricopeptide repeat domain 3325427990654326851Rat
1563421Fyb1FYN binding protein 125562158555781206Rat
1561161Cspg4bchondroitin sulfate proteoglycan 4B24493980745008284Rat
1308116Nim1kNIM1 serine/threonine protein kinase25167076451714782Rat
1359477Mocs2molybdenum cofactor synthesis 224650457446516327Rat
1584008Oxct13-oxoacid CoA transferase 125323637053384715Rat
1586478Il31rainterleukin 31 receptor A24411874844189943Rat
1587383Etv5-ps2ETS variant transcription factor 5, pseudogene 225487215354875943Rat
1587384Parp8poly (ADP-ribose) polymerase family, member 824867940548848700Rat
1566344Eef1a1-ps13eukaryotic translation elongation factor 1 alpha 1, pseudogene 1325353051053547324Rat
1584143Cdc20bcell division cycle 20B24468834944738056Rat
1584164Mcidasmulticiliate differentiation and DNA synthesis associated cell cycle protein24463658144643730Rat
1587346Nntnicotinamide nucleotide transhydrogenase25141141351505125Rat
1592273Dnaja1-ps4DnaJ heat shock protein family (Hsp40) member A1, pseudogene 424996595249971527Rat
1592324Rnps1-ps4RNA binding protein with serine rich domain 1, pseudogene 424918239849183276Rat
1585493Slc25a5-ps7solute carrier family 25 member 5, pseudogene 724210259442103565Rat
1586621GaptGrb2-binding adaptor protein, transmembrane24192753341932120Rat
1594504Mfap1a-ps1microfibrillar-associated protein 1A, pseudogene 124689250046893901Rat
1594505Nop16-ps4NOP16 nucleolar protein, pseudogene 424540489145406036Rat
1594380Ndufs4NADH:ubiquinone oxidoreductase subunit S424595132746061829Rat
1597407Arl15ADP-ribosylation factor like GTPase 1524543822145822562Rat
2318781Setd9-ps1SET domain containing, pseudogene 124331935943322764Rat
2319559Rps15al4ribosomal protein S15A-like 425443754454438039Rat
2318361Dhx29DExH-box helicase 2924456065344611450Rat
2322829Med27-ps1mediator complex subunit 27, pseudogene 125290706352909893Rat
2323229LOC100363314hypothetical protein LOC10036331425175256851765798Rat
2323540LOC100359700eukaryotic translation initiation factor 1-like24539105545392369Rat
2324334Blvra-ps1biliverdin reductase A, pseudogene 124553851845540448Rat
4888547Mir449cmicroRNA 449c24466917944669277Rat
2325536Mir449amicroRNA 449a24467071444670804Rat
7497849LOC102548571uncharacterized LOC10254857125245354252486117Rat
7534134LOC102550255uncharacterized LOC10255025525516220155180537Rat
7512922LOC102556362uncharacterized LOC10255636225159536651601133Rat
7503935Rpl21-ps11ribosomal protein L21, pseudogene 1125602493656025455Rat
7637192Hnrnpr-ps1heterogeneous nuclear ribonucleoprotein R, pseudogene 124433760744340578Rat
7637193Rpl29-ps16ribosomal protein L29, pseudogene 1624747080547471791Rat
7643568LOC102547847uncharacterized LOC10254784725206884452075436Rat
7570025LOC102548637uncharacterized LOC10254863725280511752812142Rat
7557368LOC102556643uncharacterized LOC10255664325192915351940031Rat
7606174LOC102554307uncharacterized LOC10255430724364744143693619Rat
7567660LOC102547360uncharacterized LOC10254736025163178951640783Rat
7691404LOC102557105MLV-related proviral Env polyprotein-like24903190549036174Rat
7736543LOC102554057uncharacterized LOC10255405724349634343504404Rat
7683682LOC102553935uncharacterized LOC10255393524342026843436706Rat
7724377Septin7-ps2septin 7, pseudogene 225393384753941923Rat
7700687LOC102548142uncharacterized LOC10254814225217956352183483Rat
9137783LOC103691475uncharacterized LOC10369147525438126754427711Rat
9193186LOC103691468uncharacterized LOC10369146825196693351972303Rat
9201190LOC103691453activated RNA polymerase II transcriptional coactivator p15 pseudogene24329894943300263Rat
9208714LOC103691456uncharacterized LOC10369145624389251943954354Rat
9353912Anxa2rl-ps1annexin A2 receptor like, pseudogene 125186121051861735Rat
9243561LOC103691473V-type proton ATPase subunit e 1 pseudogene25285185152852085Rat
9428698LOC103691472uncharacterized LOC10369147225251723252536035Rat
9469491LOC103691462serine/arginine-rich splicing factor 3 pseudogene24412959044130630Rat
9436047LOC103691451uncharacterized LOC10369145124272675242733899Rat
9476424LOC103691460putative 60S ribosomal protein L39-like 524747242447472576Rat
9411836LOC103691459uncharacterized LOC10369145924630205646347633Rat
9453411LOC103691452uncharacterized LOC10369145224283068542950401Rat
11474944LOC108349945uncharacterized LOC10834994524526939345274138Rat
11474953LOC10835016760S ribosomal protein L17 pseudogene24753795647538570Rat
11451820LOC108349943uncharacterized LOC10834994324158493541590024Rat
11371833LOC10834994960S ribosomal protein L15 pseudogene25151420551515270Rat
11387679LOC108349948uncharacterized LOC10834994824793105447941984Rat
11378089Gapdh-ps22Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 2225309889553100054Rat
11382661LOC108349957uncharacterized LOC10834995725631680056349595Rat
41235092LOC120100733uncharacterized LOC12010073325562890155632966Rat
41381356LOC120093165uncharacterized LOC12009316525202302952027944Rat
41168070LOC120101349small nucleolar RNA SNORA1724997342749973549Rat
41168552Trnat-agu8transfer RNA threonine (anticodon AGU) 824599777145997843Rat
41141093LOC120100722uncharacterized LOC12010072225187453551883271Rat
41279240LOC120100703uncharacterized LOC12010070324305524743055771Rat
41358011Hnrnpa1-ps25heterogeneous nuclear ribonucleoprotein A1, pseudogene 2525016131450162965Rat
41172051LOC120100725uncharacterized LOC12010072525197693651989635Rat
41253562LOC120100713uncharacterized LOC12010071324538796445393370Rat
41117892LOC120101248small nucleolar RNA SNORA4424661684846616952Rat
41328657Snord72small nucleolar RNA, C/D box 7225421716054217239Rat
41213139LOC120100718uncharacterized LOC12010071824648879546493298Rat
41213451Rnu6-446RNA, U6 small nuclear 44625175073951750849Rat
41394010Rpl37ribosomal protein L3725421535254217429Rat
41265375LOC120101296small nucleolar RNA SNORA1725407619354076322Rat
41266421LOC120100704uncharacterized LOC12010070424338422243413501Rat
41343784LOC120101265small nucleolar RNA SNORA4825127413651274279Rat
41124508Anxa2rl-ps7annexin A2 receptor like, pseudogene 725205838852059000Rat
41156848LOC120101369U6atac minor spliceosomal RNA25282301252823132Rat
41345329Snrpg-ps5small nuclear ribonucleoprotein polypeptide G, pseudogene 525429780354301899Rat
41182925LOC120100730uncharacterized LOC12010073025433683354341457Rat
41269108Anxa2rl-ps3annexin A2 receptor like, pseudogene 325191837451918968Rat
41103209Anxa2rl-ps2annexin A2 receptor like, pseudogene 225200046852001148Rat
41160333LOC120100727uncharacterized LOC12010072725215394452162355Rat
41185079LOC120101129U4 spliceosomal RNA24814008348140209Rat
41292358LOC120100719uncharacterized LOC12010071925159452351596329Rat
41399437LOC120100710uncharacterized LOC12010071024506283845068931Rat
41072327Rnu6-985RNA, U6 small nuclear 98524682793846828043Rat
41374960LOC120100726uncharacterized LOC12010072625210296052107722Rat
41401973LOC120100716uncharacterized LOC12010071624574321645773022Rat
41402336LOC120100724uncharacterized LOC12010072425194594851952730Rat
41081966Trnap-agg68transfer RNA proline (anticodon AGG) 6824319849743198577Rat
41164131LOC120100705uncharacterized LOC12010070524343872443442856Rat
41232818LOC120100714uncharacterized LOC12010071424532182745369348Rat
41274238LOC120093149uncharacterized LOC12009314925203387852045558Rat
41404161Anxa2rl-ps6annexin A2 receptor like, pseudogene 625216521252165896Rat
41083925LOC120101290small nucleolar RNA SNORA1725377859953778725Rat
41109932LOC120100706uncharacterized LOC12010070624404788844057753Rat
41132845LOC120101181U6 spliceosomal RNA24403425044034357Rat
41010767LOC120100712uncharacterized LOC12010071224516406845188903Rat
40973599Rpl32-ps16ribosomal protein L32, pseudogene 1624509889445099915Rat
40980049Hmgb1-ps16high-mobility group box 1, pseudogene 1625535979355406351Rat
40930512LOC120100715uncharacterized LOC12010071524533384945344756Rat
40930809LOC120100708uncharacterized LOC12010070824500810145013288Rat
40932300LOC120101123small nucleolar RNA U324981712849817210Rat
40991465LOC120100717uncharacterized LOC12010071724612810946130571Rat
40942807Rnu6-572RNA, U6 small nuclear 57224799928247999387Rat
41047976Anxa2rl-ps5annexin A2 receptor like, pseudogene 525205628752056881Rat
41074866Coq10b-ps1coenzyme Q10B, pseudogene 125241448352418437Rat
41242421Anxa2rl-ps4annexin A2 receptor like, pseudogene 425200256852003181Rat
41024273LOC120101084uncharacterized LOC12010108424131450641320081Rat
41048152LOC120100731uncharacterized LOC12010073125453591354549230Rat
41077530LOC120101211small nucleolar RNA SNORD3625147495151475023Rat
41319327LOC120100732uncharacterized LOC12010073225557598655580855Rat
41332544LOC120100558uncharacterized LOC12010055825292745152929546Rat
41144197LOC120101125U4 spliceosomal RNA25642213356422274Rat
41152499LOC120100720uncharacterized LOC12010072025171595651722569Rat
41056682Fkbp3-ps1FKBP prolyl isomerase 3, pseudogene 125642709656427708Rat
41337111Ndufaf4-ps3NADH:ubiquinone oxidoreductase complex assembly factor 4, pseudogene 325176779751768492Rat
41235450Rnu2-66RNA, U2 small nuclear 6625079720950797380Rat
41305934LOC120100709uncharacterized LOC12010070924502713745050955Rat
41068271LOC120100707uncharacterized LOC12010070724441967844426375Rat
41308381Pfdn2-ps1prefoldin subunit 2, pseudogene 124512485645125320Rat
41240399LOC120101337small nucleolar RNA SNORA1725528960555289731Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10602D2Wox1318224613067246130826Ratregion
10924D2Mit318424328333143283515Ratregion
10925D2Wox1213224328330043283432Ratregion
34278D2Mgh1412024315456643154682Ratregion
34334D2Mgh2115025604303156043181Ratregion
36071D2Rat1517024713789847138066Ratregion
36356D2Mit3318125314797553148156Ratregion
35292D2Rat1817624112578941125954Ratregion
36902D2Rat27017325382274753822920Ratregion
37018D2Rat1414224280460742804738Ratregion
36470D2Rat1617024366500843665178Ratregion
36659D2Rat1713324826852848268661Ratregion
39668D2Rat25424024390765543907909Ratregion
39874D2Rat19814824316236643162530Ratregion
38064D2Rat15322024278647942786683Ratregion
40446D2Rat29815524440524444405397Ratregion
40672D2Rat20220025172913951729300Ratregion
38476D2Rat14211124259119142591300Ratregion
38950D2Rat17323724900313349003364Ratregion
39460D2Rat20012624877318548773307Ratregion
41334D2Rat20117324965706949657252Ratregion
42560D2Rat26615324445797644458140Ratregion
42566D2Rat26714124388870143888824Ratregion
42567D2Rat26924724468070444680951Ratregion
42569D2Rat31624024997620649976429Ratregion
42570D2Rat31412524904333549043454Ratregion
42571D2Rat31524124876408448764308Ratregion
42572D2Rat31821025146482951465022Ratregion
42575D2Rat31924225646919956469449Ratregion
41538D2Rat19913324124396341244106Ratregion
44552D9Wox2113625038964950389703Ratregion
43467D2Got2414224157675441576896Ratregion
43488D2Got18217824312539943125962Ratregion
43488D2Got18217824312578443125962Ratregion
43489D2Got18118924294670342946889Ratregion
43490D2Got2715824445844044458595Ratregion
43491D2Got2819124550883445509022Ratregion
43492D2Wox516024600308546003241Ratregion
43493D2Got3112324600313046003253Ratregion
43495D2Got3027024534852745348797Ratregion
43497D18Got8228825280399952804287Ratregion
43499D18Got8327725629810056298377Ratregion
60793D2Wox39224317101743171121Ratregion
60795D2Wox49124317094843171041Ratregion
60750D2Rat31711224115006841150174Ratregion
60319D2Got2511824143647241436590Ratregion
62472D2Uia228525376493453765210Ratregion
66383D2Mco4227524505084645051115Ratregion
66652D2Mco1323124562330245623550Ratregion
67253D2Arb225124328332343283574Ratregion
67254D2Arb314824613067446130822Ratregion
67256D2Arb533025393205553932385Ratregion
67322D2Arb3121524879506048795275Ratregion
67801D2Uwm1837824876392248764414Ratregion
1578818D2Chm22921325172320051723413Ratregion
1578821D2Chm14924325269296752693212Ratregion
1630785D2Got36615124791932247919475Ratregion
1631518D2Wox507224488403444884106Ratregion
1632235D2Got30926025127402751274287Ratregion
1578984D3Chm23824725482583354826080Ratregion
1579018D2Chm27822325651925256519473Ratregion
1579033D2Chm19124325630906856309311Ratregion
1579094D2Chm27722725653191256532139Ratregion
1579096D2Chm19214925600608156006230Ratregion
1579141D2Chm23315825442309754423255Ratregion
1579189D2Chm14521724942610749426326Ratregion
1627922D2Got36528525464204154642326Ratregion
1627969D2Got30710825057717150577279Ratregion
1628467D2Got39428125580970855809987Ratregion
1629111D2Got30513324918819649188326Ratregion
1629874D2Got38527625580971255809986Ratregion
1638587D5Wox661924650911346509732Ratregion
1639711D2Got41918925524981755250003Ratregion
1633292D2Got40630025409503254095332Ratregion
1633572D2Got30428024754160747541887Ratregion
1639820D2Got42912424794441247944537Ratregion
1639964D2Got31117925249934652499525Ratregion
1635998D2Got30619924900261349002812Ratregion
1636716D2Got37619725580971255809907Ratregion
1633960D2Got30216324536012445360287Ratregion
7206386fb98c02.x1109224114448941145581Ratregion
7206440Dab297725556589655566873Ratregion
5035753D5S242212425590373055903854Ratregion
5035795PMC186328P118724808613348086320Ratregion
5038952RH12742718924467662944676818Ratregion
5036889AU04952519624144973041449926Ratregion
5035721WI-2146725324302403543024288Ratregion
5025966RH13038520324523187845232081Ratregion
5026322RH13176718024664623946646419Ratregion
5026438RH13221220325630275156302954Ratregion
5031980AU04648423625465825554658489Ratregion
5026612RH13287322025432652954326749Ratregion
5032072AU02910816925370274853702919Ratregion
5032303AU01706313724467672144676858Ratregion
5032307AI85126111525317510353175218Ratregion
5026954RH13416921624593840645938622Ratregion
5027089IB167116224197466241974824Ratregion
5029663BF38677320825166785351668061Ratregion
5032619RH13467421825167086851671086Ratregion
5027571SHGC-6475717425434552654345700Ratregion
5033011RH13727221225629267556292887Ratregion
5027685SGC3418012525555543455555559Ratregion
5033609RH13944913725146283951462976Ratregion
5030937BF3995509224544004145440133Ratregion
5028565AA98641717225254173352541905Ratregion
5031065BE11560315424456123844561392Ratregion
5031139BE11613215125140460351404754Ratregion
5054157RH14306325025384722353847473Ratregion
5054299RH14314415025319050853190658Ratregion
5056843RH14461315124990211949902270Ratregion
5057231D2Uwm4024712581647126054Ratregion
5059508BE09713815024437569344375843Ratregion
5057920BF38630715424573812945738283Ratregion
5056031RH14414313824192808041928218Ratregion
5056369RH14433910324597915745979260Ratregion
5058766BF38706315524990055249900707Ratregion
5052667RH14219616325254257452542736Ratregion
5058904BF38720915125172935151729502Ratregion
5059170BI27851916824343917143439339Ratregion
5053827RH14287312125281186552811986Ratregion
5050042RH13382918325556713555567318Ratregion
5050260RH13395318024582089445821074Ratregion
505166913.MMHAP86FRE7.seq18524114118641141371Ratregion
5043502RH13006219425590358655903780Ratregion
5044846RH13083720624553907845539284Ratregion
5045162RH13101921624406199744062211Ratregion
5043874RH13027718024679785446798034Ratregion
5045988RH13149419025590744355907633Ratregion
5046232RH13163421624484078144840997Ratregion
5041880RH12911215024461127244611422Ratregion
5046326RH13168819824450121044501408Ratregion
5046250RH13164522024398346843983688Ratregion
5047882RH13258318324463365144633834Ratregion
5039456RH12771618224450004444500226Ratregion
5049572RH13355820524651565546515860Ratregion
5040228RH12816320325141167051411873Ratregion
5039750RH12788521724989961949899836Ratregion
5041232RH12873918125599531055995491Ratregion
5072786RH13705221024500686645007076Ratregion
5072126RH13666620325487422154874421Ratregion
5073968RH13774313724162146041621597Ratregion
5075936RH13888315224123016741230319Ratregion
5072594RH13694021425338435453384568Ratregion
5074516RH13806222724912967449129901Ratregion
5077134RH13958019625375182753752023Ratregion
5075676RH13873212325140979451409917Ratregion
5077548RH13981919324651608446516277Ratregion
5079768RH14119120124594831245948513Ratregion
5079800RH14121018524582208745822272Ratregion
5079832RH14122918024162055541620720Ratregion
5077920RH14003621024664966946649880Ratregion
5078566RH14041812125375172353751844Ratregion
5079938RH14128920025254234852542548Ratregion
5078248RH14022918025634931456349494Ratregion
5079052RH14070720125369089153691094Ratregion
5073342RH13738115525562117155621325Ratregion
5080436RH14157819924808231348082512Ratregion
5072954RH13715018925045637250456561Ratregion
5071174RH13493020624631604446316250Ratregion
5071174RH13493020624631604446316250Ratregion
5073184RH13728818025152309451523274Ratregion
5071866RH13533019524523859545238790Ratregion
5071360RH13503721625647969856479914Ratregion
5071580RH13516420424308865443088858Ratregion
5063412BE10764521824980127649801495Ratregion
5065086BF40574915024579230745792457Ratregion
5066968AU04804315825140803751408190Ratregion
5067166AU04792014224489719344897337Ratregion
5067330AU04781926424635392246354181Ratregion
5068280AU04724114424498737244987516Ratregion
5068384AU04717918724771111747711304Ratregion
5069616AU04638022424360230843602535Ratregion
5070476AV2064789924422801744228116Ratregion
5062268BE10645020324381152943811732Ratregion
5065516BE10919617325087646650876639Ratregion
5065582BE11592515725143833251438490Ratregion
5064404BI30210521324710772147107934Ratregion
5063760AW53510415224650819546508347Ratregion
5065404AA95756019524302352243023717Ratregion
5062548BI28898517224412396044124131Ratregion
5064242BE12084718025629097456291154Ratregion
5066038BF41318317824584264645842824Ratregion
5061326BE09962517424991038749910561Ratregion
5063034BF39827315824453845444538612Ratregion
5063212BI30143920224355485143555053Ratregion
5063262BF40404319424650812446508318Ratregion
5063264BE10749615024500645145006601Ratregion
5087080BQ19287518824135685041357038Ratregion
5087522PMC26870P224525080196650802211Ratregion
5082355BE11922415424805431348054467Ratregion
5086498BF40159421724133146541331682Ratregion
5089785AU04936221024693101846931228Ratregion
5082663BE11995321224723108347231306Ratregion
5083197BF39096617924162397741624156Ratregion
5087995Map3k118524334880943348994Ratregion
5088263AU04846426125472418054724441Ratregion
5088263AU04846426125472421254724441Ratregion
5089503AU04919429625417444354174479Ratregion
5090691AU04990319624379939343799589Ratregion
5083677BF41805913224469432944694461Ratregion
5084962AI17180722324410337444103597Ratregion
5090809AU04997619225328865253288845Ratregion
5080994RH14190219825072747750727675Ratregion
5090323AU04968320325639939156399448Ratregion
5085659BF4165949725323769953237796Ratregion
5089979AU04947718124333968943339874Ratregion
5088947AU04886315624848086948481025Ratregion
5084592AI17040418424652067946520863Ratregion
5081643BE11782420025150608551506285Ratregion
5085258AW53275016724152864441528811Ratregion
5507507ECD0947662024331578443316404Ratregion
5507641Ddx4165924424700444248663Ratregion
5507666Ghr10025255176852552167Ratregion
5504304D10S1272E19724433872444338921Ratregion
5505500D1S284289825242276052423658Ratregion
5504444PMC208779P159024424700444247594Ratregion
5505654UniSTS:488481155824192783441929393Ratregion
5506467G1600124225080192750802169Ratregion
5506674REN2846526124331604643316307Ratregion
5506676REN2847124124331486143315102Ratregion
5506670REN2800522824341375043413978Ratregion
5506672REN2835725424334939943349653Ratregion
5507223UniSTS:22534416525075831750758482Ratregion
5500139UniSTS:23711320824884081848841026Ratregion
5500787stSG625181136024331485943316219Ratregion
5500789stSG625182108124331379843314879Ratregion
5500791stSG625183113824331268043313818Ratregion
5500903RP_L37_191225421647554217387Ratregion
5500957MARC_9941-9942:996688685:2024332104643321420Ratregion
5503534HCN1__670186124989887449899735Ratregion
5504922Isl16824807971648079784Ratregion
5506678REN2860924024328803243288272Ratregion
5502799MIER322524331238443312609Ratregion
5502293RH12430311224308942843089540Ratregion
Position Markers

Flank 1: (D2Rat18)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2241,125,789 - 41,125,954 (+)MAPPER
Rnor_6.0241,063,439 - 41,063,603NCBI
Rnor_5.0260,126,669 - 60,126,833UniSTS
RGSC_v3.4240,912,197 - 40,912,362RGD
RGSC_v3.4240,912,198 - 40,912,362UniSTS
RGSC_v3.1240,832,566 - 40,832,731RGD
Celera236,959,987 - 36,960,151UniSTS
RH 3.4 Map2178.9RGD
RH 3.4 Map2178.9UniSTS
RH 2.0 Map251.8RGD
SHRSP x BN Map218.4498RGD
Cytogenetic Map2q16UniSTS
Flank 2: (D2Chm277)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2256,531,912 - 56,532,139 (+)MAPPER
Rnor_6.0256,736,401 - 56,736,627NCBI
Rnor_5.0276,472,547 - 76,472,773UniSTS
RGSC_v3.4256,722,060 - 56,722,286UniSTS
Celera252,150,912 - 52,151,140UniSTS
Cytogenetic Map2 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777242804738Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2902351954023519Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)21185206249003364Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21907682564076825Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22066244865662448Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22490385374786777Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22691781781754745Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
1331764Bp205Blood pressure QTL 2053.476arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22699957143154682Rat
1643006Pain1Pain QTL 13.630.005mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)22699957148268661Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22715716072157160Rat
1300160Hrtrt3Heart rate QTL 33.62heart pumping trait (VT:2000009)absolute change in heart rate (CMO:0000534)22997159351729300Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
731179Mamtr3Mammary tumor resistance QTL 30.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)23237377043665178Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23502311780023117Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23513484188029593Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240067944102785628Rat
12879863Bp402Blood pressure QTL 4020.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24112578956532139Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)24280460760653831Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243154682202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)243162366111362592Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)24317101783575226Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
1354592Rf50Renal function QTL 503.5urine output (VT:0003620)timed urine volume (CMO:0000260)25382274774786777Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
1579916Bp270Blood pressure QTL 2700.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)25653191259324719Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 6 gender: male 1599557
qtl_general has no effect on heart left or right ventricle mass, kidney mass, heart mass, aortic mass or body mass 1599557
qtl_statistics_details software package used: ANOVA followed by Dunnett test in the SYSTAT 9 program 1599557
qtl_trait_method measurement method: selected males were weaned at 21 days of age then fed 2% NaCl diet starting from 35 days of age; telemetric probes were implanted at 56 days of age and blood pressure recorded after 10 days 1599557