Bss118 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bss118 (Bone structure and strength QTL 118) Rattus norvegicus

Symbol: Bss118
Name: Bone structure and strength QTL 118
RGD ID: 11528648
Trait: femur strength trait   (VT:0010010)    
Measurement Type: femur ultimate displacement   (CMO:0002719)    
LOD Score: 6.658
P Value: 2.2E-7
Variance: Not Available
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01142,784,725 - 45,474,665RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01145,975,219 - 48,667,416RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41141,400,037 - 44,300,147RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: NAft:HS 

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
NAft:HS  (IEA)


References - curated
# Reference Title Reference Citation
1. Fine mapping of bone structure and strength QTLs in heterogeneous stock rat. Alam I, etal., Bone. 2015 Dec;81:417-26. doi: 10.1016/j.bone.2015.08.013. Epub 2015 Aug 19.


Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Flank 1: (rs107420884)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01142,784,725 - 42,784,725RGD
Rnor_5.01145,975,219 - 45,975,219RGD
RGSC_v3.41141,400,037 - 41,400,037RGD
Peak: (rs105204296)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01145,611,977 - 45,611,977RGD
Rnor_5.01148,801,452 - 48,801,452RGD
RGSC_v3.41141,851,716 - 41,851,716RGD
Flank 2: (rs198448974)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01145,474,665 - 45,474,665RGD
Rnor_5.01148,667,416 - 48,667,416RGD
RGSC_v3.41144,300,147 - 44,300,147RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 1524 HS rats (728 male, 796 female) were used. 11528619
qtl_general measurement method: Rats on a standard diet were euthanized at 17 to 20 weeks of age, and right femurs were analyzed using a material testing machine (Alliance RT/5,MTS Systems Corp., Eden Prairie, USA). 11528619