Gmadr5 QTL Report (Rattus norvegicus) - Rat Genome Database

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Pathways

QTL: Gmadr5 (Adrenal mass QTL 5) Rattus norvegicus

Symbol: Gmadr5
Name: Adrenal mass QTL 5
RGD ID: 10058949
Previously known as: relative adrenal gland weight 9
Trait: adrenal gland mass   (VT:0010420)    
Measurement Type: both adrenal glands wet weight to body weight ratio   (CMO:0002411)    
LOD Score: 2.0
P Value: 0.014
Variance: 8.2
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2942,791,513 - 87,976,209RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0947,248,965 - 94,124,663RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.0946,933,155 - 96,842,633RGD_MAPPER_PIPELINERnor_5.0
RGSC_v3.4939,691,557 - 85,578,105RGD_MAPPER_PIPELINERGSC_v3.4
Cross Type: intercross
Strains Crossed: ISIAH WAG/Nov 



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Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
ISIAH  (IEA)
WAG/Nov  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic control of the corticosterone level at rest and under emotional stress in ISIAH rats with inherited stress-induced arterial hypertension. Redina OE, etal., Clin Exp Hypertens. 2010;32(6):364-71. doi: 10.3109/10641961003628502.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D9Rat15)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2965,383,789 - 65,383,934 (+)MAPPER
Rnor_6.0970,686,742 - 70,686,886NCBI
Rnor_5.0971,887,822 - 71,887,966UniSTS
RGSC_v3.4962,634,672 - 62,634,991RGD
RGSC_v3.4962,634,744 - 62,634,888UniSTS
Celera962,794,142 - 62,794,286UniSTS
RGSC_v3.1962,781,726 - 62,781,870RGD
RH 3.4 Map9551.9UniSTS
RH 3.4 Map9551.9RGD
RH 2.0 Map9613.3RGD
SHRSP x BN Map944.4198RGD
FHH x ACI Map942.29RGD
Flank 2: (D9Rat63)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2942,791,513 - 42,791,750 (+)MAPPER
Rnor_6.0947,248,965 - 47,249,201NCBI
Rnor_5.0946,933,155 - 46,933,391UniSTS
RGSC_v3.4939,691,558 - 39,691,794UniSTS
RGSC_v3.4939,691,557 - 39,691,794RGD
Celera940,535,370 - 40,535,606UniSTS
RGSC_v3.1939,692,972 - 39,693,208RGD
RH 3.4 Map9415.8UniSTS
RH 3.4 Map9415.8RGD
RH 2.0 Map9409.9RGD
SHRSP x BN Map937.6898RGD
Cytogenetic Map9q21UniSTS


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 6 months old 126 F2 males 10053640
qtl_general software package used: ANOVA, MAPMAKER/EXP 3.0, MAPMAKER/QTL 1.1 10053640
qtl_general measurement method: animals were restraint in a cylindrical wire cage for 30 minutes; after one week they were decapitated and adrenals were weighed relative adrenal mass was calculated as mg/100g of body weight 10053640
qtl_general confidence interval: 30-74 Mb 10053640