Gmadr5 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Gmadr5 (Adrenal mass QTL 5) Rattus norvegicus

Symbol: Gmadr5
Name: Adrenal mass QTL 5
RGD ID: 10058949
Previously known as: relative adrenal gland weight 9
Trait: adrenal gland mass   (VT:0010420)    
Measurement Type: both adrenal glands wet weight to body weight ratio   (CMO:0002411)    
LOD Score: 2.0
P Value: 0.014
Variance: 8.2
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2942,791,513 - 87,976,209RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0947,248,965 - 94,124,663RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0946,933,155 - 96,842,633RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4939,691,557 - 85,578,105RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: ISIAH WAG/Nov 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
ISIAH  (IEA)
WAG/Nov  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic control of the corticosterone level at rest and under emotional stress in ISIAH rats with inherited stress-induced arterial hypertension. Redina OE, etal., Clin Exp Hypertens. 2010;32(6):364-71. doi: 10.3109/10641961003628502.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
727867Il18rapinterleukin 18 receptor accessory protein94276811242800964Rat
3721Slc9a4solute carrier family 9 member A494282446842879767Rat
3719Slc9a2solute carrier family 9 member A294293200143014447Rat
9295055LOC103690525uncharacterized LOC10369052594293496542943357Rat
1562212Mfsd9major facilitator superfamily domain containing 994301961143039100Rat
1563696Tmem182transmembrane protein 18294305943243111318Rat
41288307LOC120094676uncharacterized LOC12009467694311709643119324Rat
6499281LOC100910304uncharacterized LOC10091030494345148443528710Rat
11495887LOC108352024uncharacterized LOC10835202494358788243617987Rat
2320919Rps8-ps5ribosomal protein S8, pseudogene 594372584043726444Rat
7613346LOC102549950uncharacterized LOC10254995094373934443744575Rat
11452400LOC108351921uncharacterized LOC10835192194395688644145114Rat
11382578LOC108352025uncharacterized LOC10835202594417329344246711Rat
41003253LOC120094677uncharacterized LOC12009467794452142544577442Rat
41006317LOC120094678uncharacterized LOC12009467894459919444629263Rat
1562818Rpl35-ps10ribosomal protein L35, pseudogene 1094487377244874628Rat
7688151Pantr1POU3F3 adjacent non-coding transcript 194489833844943631Rat
7517566LOC102547518uncharacterized LOC10254751894494386545040196Rat
619768Pou3f3POU class 3 homeobox 394494587244948986Rat
7667713LOC102547455uncharacterized LOC10254745594495584944963305Rat
9182814LOC103690528uncharacterized LOC10369052894497453944981088Rat
1306558Mrps9mitochondrial ribosomal protein S994511355445172375Rat
41053977LOC120094930small nucleolar RNA SNORA1794512781245127930Rat
1306253Gpr45G protein-coupled receptor 4594522136445309713Rat
40944792Hnrnpa1-ps34heterogeneous nuclear ribonucleoprotein A1, pseudogene 3494524630645247422Rat
1560362Arpc5l-ps1actin related protein 2/3 complex, subunit 5-like, pseudogene 194526335245264349Rat
1310772Tgfbrap1transforming growth factor, beta receptor associated protein 194532093045371329Rat
1310553RGD1310553similar to expressed sequence AI59747994537139645382123Rat
61963Fhl2four and a half LIM domains 294538897945462530Rat
11472363LOC108351922thymosin beta-10 pseudogene94554465545544831Rat
1592054Hsp90ab1-ps13heat shock protein 90 alpha family class B member 1, pseudogene 1394554506345547427Rat
41019548LOC120094961U2 spliceosomal RNA94558722445587387Rat
1305965Nck2NCK adaptor protein 294571397945840330Rat
1560806Golph3l-ps1golgi phosphoprotein 3-like, pseudogene 194589049245891363Rat
1305645Ecrg4ECRG4 augurin precursor94599295446012605Rat
41075746LOC120094680uncharacterized LOC12009468094602620946037049Rat
41147243Mrpl30-ps7mitochondrial ribosomal protein L30, pseudogene 794603925946045901Rat
621584Tpp2tripeptidyl peptidase 294604671246128157Rat
41332032LOC120094976U6 spliceosomal RNA94606065646060762Rat
1561425Mettl21cmethyltransferase 21C, AARS1 lysine94613045146145128Rat
1586177Dnajc14-ps2DnaJ heat shock protein family (Hsp40) member C14, pseudogene 294617746346179852Rat
7680407Ccdc168coiled-coil domain containing 16894619823446236325Rat
1309095Tex30testis expressed 3094624274846252273Rat
1304684Poglut2protein O-glucosyltransferase 294625638846268714Rat
1311888Bivmbasic, immunoglobulin-like variable motif containing94626875846305038Rat
40967698LOC120094681uncharacterized LOC12009468194630592746309179Rat
1586176Ercc5ERCC excision repair 5, endonuclease94630947746354478Rat
1596736Mettl21cl1methyltransferase like 21C-like 194638214146397299Rat
11447044Hmgb1-ps24high-mobility group box 1, pseudogene 2494639770746398530Rat
1562067RGD1562067similar to cell division cycle associated 394650653346507525Rat
1306380Gulp1GULP PTB domain containing engulfment adaptor 194662269946899005Rat
41128029LOC120094972U6 spliceosomal RNA94688023246880338Rat
1590772Hspd1-ps13heat shock protein family D (Hsp60) member 1, pseudogene 1394699145746996798Rat
1595408Ahcy-ps5adenosylhomocysteinase, pseudogene 594702399047025181Rat
1584383Rps3-ps8ribosomal protein S3, pseudogene 894711540647116385Rat
71029Col3a1collagen type III alpha 1 chain94737461147410547Rat
70921Col5a2collagen type V alpha 2 chain94744873647598396Rat
41220839LOC120094964U2 spliceosomal RNA94757283347572962Rat
1562143RGD1562143similar to Ctps protein94780212947802752Rat
1564869Wdr75WD repeat domain 7594790316647933399Rat
2323350Got2-ps3glutamic-oxaloacetic transaminase 2, pseudogene 394799538648000701Rat
620180Slc40a1solute carrier family 40 member 194803352648053876Rat
1597774LOC685108similar to proteolipid protein 294807677548077809Rat
41174017AsdurfASNSD1 upstream open reading frame94812677648139054Rat
1306332Asnsd1asparagine synthetase domain containing 194812680248139073Rat
1561071Ankarankyrin and armadillo repeat containing94814153448215400Rat
1305575Osgepl1O-sialoglycoprotein endopeptidase-like 194821499548229440Rat
1359511Pms1PMS1 homolog 1, mismatch repair system component94822940348340237Rat
2300146Ormdl1ORMDL sphingolipid biosynthesis regulator 194824336548253316Rat
11436408LOC10835192460S ribosomal protein L37 pseudogene94828521248287989Rat
41298570LOC120094923small nucleolar RNA SNORA1794839195548392087Rat
3115Mstnmyostatin94845398248458809Rat
1595308Smc6-ps1structural maintenance of chromosomes 6, pseudogene 194852114648522274Rat
1596493LOC685203hypothetical protein LOC68520394853914048584882Rat
6486560Srsf7-ps4serine and arginine rich splicing factor 7, pseudogene 494858786548589638Rat
1308392Hibch3-hydroxyisobutyryl-CoA hydrolase94859009748669896Rat
1306071Inpp1inositol polyphosphate-1-phosphatase94868803748717793Rat
1596442Pgap2-ps2post-GPI attachment to proteins 2, pseudogene 294874157148760802Rat
1565371Bnip3-ps1BCL2 interacting protein 3, pseudogene 194876280448764417Rat
1562317Mfsd6major facilitator superfamily domain containing 694877317148858471Rat
1560421Nemp2nuclear envelope integral membrane protein 294886125248880565Rat
6487672Dppa3-ps5developmental pluripotency-associated 3, pseudogene 594888215848883075Rat
70882Nab1Ngfi-A binding protein 194905357949093078Rat
11474459LOC108352026high mobility group protein B1 pseudogene94921481949215542Rat
11444870LOC108351925glyceraldehyde-3-phosphate dehydrogenase pseudogene94927239849273479Rat
2707Glsglutaminase94934461649416900Rat
3771Stat1signal transducer and activator of transcription 194941956149459969Rat
1305747Stat4signal transducer and activator of transcription 494947266049588540Rat
9346435LOC103690550uncharacterized LOC10369055094968777449689862Rat
70994Myo1bmyosin Ib94969004349852373Rat
11365277LOC108351926thymosin beta-10 pseudogene94997482349975501Rat
6501804Rpl12-ps4ribosomal protein L12, pseudogene 494999652149997143Rat
1306658Nabp1nucleic acid binding protein 195009855250133982Rat
41074009Trnaa-agc29transfer RNA alanine (anticodon AGC) 2995010982550109905Rat
1561618Rpl23-ps2ribosomal protein L23,pseudogene 295014337250154483Rat
41015968LOC120094683uncharacterized LOC12009468395017283950187261Rat
1359345Cavin2caveolae associated protein 295030207950314096Rat
41300716LOC120094969U4 spliceosomal RNA95031778850317913Rat
41107517LOC120094903small nucleolar RNA SNORA4895032157750321728Rat
41234631LOC120094970U6 spliceosomal RNA95042574950425855Rat
1308839Tmeff2transmembrane protein with EGF-like and two follistatin-like domains 295044555050733482Rat
11362092LOC108351929uncharacterized LOC10835192995048922750559755Rat
7543919Npm1-ps7nucleophosmin 1, pseudogene 795056244350587615Rat
7640284Aasdhppt-ps1aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase, pseudogene 195073524950746852Rat
41096178Rps7-ps13ribosomal protein S7, pseudogene 1395087190650872667Rat
2323836Ccdc126-ps1coiled-coil domain containing 126, pseudogene 195124491251245507Rat
1591348Mettl6-ps1methyltransferase like 6, pseudogene 195151474651515605Rat
11446793LOC10835202740S ribosomal protein S28-like95151597051516251Rat
41180480LOC120094929small nucleolar RNA SNORA1795209028852090429Rat
2323675Cyb5d1-ps1cytochrome b5 domain containing 1, pseudogene 195240881552409577Rat
40976196LOC120094959U2 spliceosomal RNA95257495452575147Rat
2323628Tmem19-ps1transmembrane protein 19, pseudogene 195275207852753081Rat
41327220LOC120094983U6 spliceosomal RNA95303196253032064Rat
1590771Nono-ps13non-POU domain containing, octamer-binding, pseudogene 1395304950253055409Rat
2323511Cct6a-ps16chaperonin containing TCP1 subunit 6A, pseudogene 1695325090653252183Rat
1590806Cct6a-ps1chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 195333839953339815Rat
41096110LOC120094846uncharacterized LOC12009484695393716753958318Rat
41123000LOC120094847uncharacterized LOC12009484795398840053993546Rat
1590805Clip1-ps1CAP-GLY domain containing linker protein 1, pseudogene 195409906354102686Rat
6498974Nelfe-ps1negative elongation factor complex member E, pseudogene 195422936854231747Rat
2318998Cacybp-ps1calcyclin binding protein, pseudogene 195431312554313795Rat
1587872Pals1-ps1protein associated with LIN7 1, MAGUK p55 family member, pseudogene 195450025654502541Rat
1590804Eno1-ps2enolase 1, pseudogene 295473030254750752Rat
1307321Slc39a10solute carrier family 39 member 1095483684154960325Rat
40971008LOC120094685uncharacterized LOC12009468595484227554876577Rat
621798Dnah7dynein, axonemal, heavy chain 795496023555266529Rat
620457Stk17bserine/threonine kinase 17b95530748555338085Rat
41049662LOC120094686uncharacterized LOC12009468695533793455363100Rat
1593244Hecw2HECT, C2 and WW domain containing E3 ubiquitin protein ligase 295535946255753106Rat
41385295LOC120094953U1 spliceosomal RNA95544593655446103Rat
1304775Ccdc150coiled-coil domain containing 15095579354455897218Rat
11383155LOC10835193160S ribosomal protein L31 pseudogene95583391155834622Rat
1309185Gtf3c3general transcription factor IIIC subunit 395588225255943037Rat
40930299LOC120094687uncharacterized LOC12009468795589813955908168Rat
1586666LOC686030hypothetical protein LOC68603095594580655949855Rat
1303213Pgap1post-GPI attachment to proteins inositol deacylase 195597557456044325Rat
1561893Ankrd44ankyrin repeat domain 4495612674656427661Rat
11391487LOC108351932uncharacterized LOC10835193295632554556333506Rat
1586604Tmem258btransmembrane protein 258 B95645037356450755Rat
1590803Rpl11-ps6ribosomal protein L11, pseudogene 695646902356469614Rat
620148Sf3b1splicing factor 3b, subunit 195649240356532300Rat
1359509Coq10bcoenzyme Q10B95655375156573671Rat
621314Hspd1heat shock protein family D (Hsp60) member 195657919556590011Rat
2844Hspe1heat shock protein family E (Hsp10) member 195658991256593000Rat
620183Mob4MOB family member 4, phocein95661737456641336Rat
9179481LOC103690547glycine cleavage system H protein, mitochondrial pseudogene95663505656636545Rat
1307304Rftn2raftlin family member 295665161756707830Rat
1311527Mars2methionyl-tRNA synthetase 2, mitochondrial95672040856729991Rat
1559527Bollboule homolog, RNA binding protein95673489056859917Rat
708420Plcl1phospholipase C-like 195690157357238782Rat
41125672LOC120094794uncharacterized LOC12009479495690850256915395Rat
11390134LOC108351933uncharacterized LOC10835193395707161657113442Rat
11468746LOC108352000glyceraldehyde-3-phosphate dehydrogenase pseudogene95808334958084426Rat
1311885Hsfy2heat shock transcription factor, Y linked 295818241558183828Rat
1562369Satb2SATB homeobox 295834802758534256Rat
41377830LOC120094880U7 small nuclear RNA95842251458422570Rat
7574954LOC102549320uncharacterized LOC10254932095852723658603337Rat
41393720LOC120094848uncharacterized LOC12009484895878303958784482Rat
41273883LOC120094688uncharacterized LOC12009468895889810858899892Rat
7505088LOC102549484uncharacterized LOC10254948495889970458949945Rat
1306941RGD1306941similar to CG31122-PA95894982158958456Rat
1311269Tyw5tRNA-yW synthesizing protein 595896110058979188Rat
1303159Maip1matrix AAA peptidase interacting protein 195897890158986831Rat
41313489LOC120094912small nucleolar RNA SNORA1795899507858995205Rat
1590802Rpl6-ps7ribosomal protein L6, pseudogene 795908227059083124Rat
11493513LOC108351935uncharacterized LOC10835193595910533959149851Rat
1309930Spats2lspermatogenesis associated, serine-rich 2-like95931994959493864Rat
41260367LOC120094689uncharacterized LOC12009468995934920359351098Rat
11470202LOC10835193660S ribosomal protein L30-like95935380059354253Rat
1564820Kctd18potassium channel tetramerization domain containing 1895950222059566857Rat
7670135LOC102550420uncharacterized LOC10255042095953541359548545Rat
41052886LOC120094872U6 spliceosomal RNA95954434359544444Rat
1308450Sgo2shugoshin 295954860559573229Rat
620528Aox1aldehyde oxidase 195957962159658772Rat
41096022LOC120094690uncharacterized LOC12009469095965508059658278Rat
1359328Aox3aldehyde oxidase 395966478459749814Rat
41013560LOC120094932small nucleolar RNA SNORA1795970150259701601Rat
41034877Ptp4a1-ps5protein tyrosine phosphatase 4A1, pseudogene 595973499759737355Rat
1311975Aox4aldehyde oxidase 495976123859818169Rat
11403437LOC10835200160S ribosomal protein L21 pseudogene95982107659823671Rat
1359668Aox2aldehyde oxidase 295982840359916175Rat
9134966LOC103690538uncharacterized LOC10369053895988788859901999Rat
735129Bzw1basic leucine zipper and W2 domains 195993067259944468Rat
1311469Clk1CDC-like kinase 195994777459959002Rat
631415Ppil3peptidylprolyl isomerase like 395996640559980147Rat
1310329Nif3l1NGG1 interacting factor 3 like 195998010160001490Rat
41352736LOC120094958U2 spliceosomal RNA95998629659986483Rat
1311844Orc2origin recognition complex, subunit 296000163160038301Rat
1309752Hycc2hyccin PI4KA lipid kinase complex subunit 296005688360129176Rat
7709066Banf1-ps3BAF nuclear assembly factor 1, pseudogene 396009990260100455Rat
1310737Ndufb3NADH:ubiquinone oxidoreductase subunit B396012924060139452Rat
620847CflarCASP8 and FADD-like apoptosis regulator96018533860236173Rat
6501057LOC100909946uncharacterized LOC10090994696019500760199453Rat
7701539LOC102550737uncharacterized LOC10255073796024891160256318Rat
620945Casp8caspase 896026386360312542Rat
1359362Flacc1flagellum associated containing coiled-coil domains 196031558160343692Rat
41185075LOC120094796uncharacterized LOC12009479696034380860368188Rat
620915Trak2trafficking kinesin protein 296034853160414036Rat
1559449StradbSTE20 related adaptor beta96041418260433084Rat
41344301Trnav-aac15transfer RNA valine (anticodon AAC) 1596041537860415450Rat
1565450C2cd6C2 calcium dependent domain containing 696043492660530843Rat
41076818LOC120094795uncharacterized LOC12009479596045159160485960Rat
41122244LOC120094911small nucleolar RNA SNORA1796050905460509188Rat
1306705Tmem237transmembrane protein 23796053334860569253Rat
620016Mpp4MAGUK p55 scaffold protein 496056973460613035Rat
40979013LOC120094797mitochondrial intermembrane space import and assembly protein 40-like96058484160585260Rat
1310372Als2alsin Rho guanine nucleotide exchange factor ALS296061318260686394Rat
1562399Rps2-ps15ribosomal protein S2, pseudogene 1596069961560700505Rat
1306205Cdk15cyclin-dependent kinase 1596071078760803638Rat
41261015LOC120094798uncharacterized LOC12009479896090520160907409Rat
41189416LOC120094799uncharacterized LOC12009479996091928260922015Rat
2321905Fzd7frizzled class receptor 796093143360934252Rat
1562029RGD1562029similar to KIAA2012 protein96096739861076596Rat
41034883LOC120094800uncharacterized LOC12009480096102262861024953Rat
1306919Sumo1small ubiquitin-like modifier 196107879061108697Rat
1596173Set-ps16Set nuclear proto-oncogene, pseudogene 1696110895261113900Rat
620484Nop58NOP58 ribonucleoprotein96112093961144810Rat
41058289LOC120094899small nucleolar RNA SNORA4896112427761124421Rat
41160946LOC120094942small nucleolar RNA SNORD7096112597461126060Rat
40961944LOC120094943small nucleolar RNA SNORD7096112674561126828Rat
41128145LOC120094947small nucleolar RNA SNORD11B96113716861137247Rat
41004670LOC120094946small nucleolar RNA SNORD1196113771561137798Rat
71082Bmpr2bone morphogenetic protein receptor type 296119271861307280Rat
1564239LOC301444pseudogene for diazepam binding inhibitor 196133652861336927Rat
1307676Fam117bfamily with sequence similarity 117, member B96134029161418531Rat
41278460LOC120094801uncharacterized LOC12009480196139447061398897Rat
735110Ica1lislet cell autoantigen 1-like96141095961469884Rat
735072Wdr12WD repeat domain 1296147549861502584Rat
1306822Carfcalcium responsive transcription factor96150236861552433Rat
1594799Nbeal1neurobeachin-like 196157515461743896Rat
41335151Atp5mc2-ps1ATP synthase membrane subunit c locus 2, pseudogene 196174626061746688Rat
735221Cyp20a1cytochrome P450, family 20, subfamily a, polypeptide 196175580461805123Rat
628771Abi2abl-interactor 296185637961904029Rat
1308387Raph1Ras association (RalGDS/AF-6) and pleckstrin homology domains 196190747661990170Rat
7736852LOC102547711uncharacterized LOC10254771196204614362050985Rat
41364019LOC120094895small nucleolar RNA SNORA5196209395062094058Rat
41235983LOC120094692uncharacterized LOC12009469296214346762149952Rat
2299Cd28Cd28 molecule96216632462194674Rat
61975Ctla4cytotoxic T-lymphocyte-associated protein 496231887462325978Rat
620123Icosinducible T-cell co-stimulator96236807562406900Rat
1590313Psma7-ps3proteasome 20S subunit alpha 7, pseudogene 396241270962415587Rat
11385622LOC108351940uncharacterized LOC10835194096244344262466139Rat
7595922LOC102548093uncharacterized LOC10254809396275091462757597Rat
1593480Paics-ps7phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 796290127462922952Rat
1584992Pard3bpar-3 family cell polarity regulator beta96303843564067178Rat
621442Nrp2neuropilin 296412281564238007Rat
7626358LOC102548410uncharacterized LOC10254841096438316264410799Rat
2321317Rpl37-ps5ribosomal protein L37, pseudogene 596441746264417855Rat
41384701LOC120094933small nucleolar RNA SNORA1796443688164436969Rat
1304808Ino80dINO80 complex subunit D96444707564514013Rat
7594970Nop16-ps2NOP16 nucleolar protein, pseudogene 296453634964546088Rat
1359670Ndufs1NADH:ubiquinone oxidoreductase core subunit S196454643064579751Rat
1311415Eef1b2eukaryotic translation elongation factor 1 beta 296458000964582737Rat
40960633LOC120094886small nucleolar RNA SNORD5196458173164581808Rat
41148168LOC120094888small nucleolar RNA SNORA4196458207064582201Rat
2728Cmklr2chemerin chemokine-like receptor 296458331064618127Rat
41365959LOC120094802uncharacterized LOC12009480296465858464670203Rat
1560005Zdbf2zinc finger, DBF-type containing 296467297464748446Rat
2321064Cox5b-ps1cytochrome c oxidase subunit 5B, pseudogene 196479269464793077Rat
1305739Adam23ADAM metallopeptidase domain 2396486287865006515Rat
9235481Fam237afamily with sequence similarity 237 member A96502431265035051Rat
2320917Dytndystrotelin96503737865098549Rat
1307874Mdh1bmalate dehydrogenase 1B96512037065168008Rat
11476915LOC108351941dnaJ homolog subfamily A member 1 pseudogene96516520265166696Rat
1307883Fastkd2FAST kinase domains 296516614865188184Rat
11454381LOC108351943uncharacterized LOC10835194396522571165235289Rat
1588771Cpocarboxypeptidase O96531999665338250Rat
40959969LOC120094803Kruppel like factor 796543368365526372Rat
1306029Klf7KLF transcription factor 796543368365526372Rat
1306029Klf7KLF transcription factor 796543753565484720Rat
9211165LOC103690543uncharacterized LOC10369054396557369165585909Rat
41094824LOC120094693uncharacterized LOC12009469396559217365596677Rat
2320870Hmga1-ps2high mobility group AT-hook 1, pseudogene 296571420665715579Rat
11396265LOC108351945uncharacterized LOC10835194596575070565758684Rat
41156961LOC120094694uncharacterized LOC12009469496578405465816748Rat
9375952LOC103690545small integral membrane protein 7-like96582536165826864Rat
41320964LOC120094582atherin-like96589857265904942Rat
620218Creb1cAMP responsive element binding protein 196590351165972562Rat
7651604Mettl21amethyltransferase 21A, HSPA lysine96593425365999964Rat
41294387LOC120094695uncharacterized LOC12009469596606187866071873Rat
1310683Ccnyl1cyclin Y-like 196607172166121742Rat
631406Fzd5frizzled class receptor 596611737066119127Rat
1307151Plekhm3pleckstrin homology domain containing M396616623366325332Rat
40943289LOC120094696uncharacterized LOC12009469696630022366302108Rat
40985218LOC120094952U1 spliceosomal RNA96637431266374472Rat
2423Crygecrystallin, gamma E96642992466432521Rat
7688659LOC102552040uncharacterized LOC10255204096643336666440952Rat
2422Crygdcrystallin, gamma D96644205466443668Rat
2421Crygccrystallin, gamma C96645159166453626Rat
1584991Crygbcrystallin, gamma B96646146066463520Rat
1595217Crygacrystallin, gamma A96648217666512873Rat
41296899Trnap-agg73transfer RNA proline (anticodon AGG) 7396652953766529617Rat
2862Idh1isocitrate dehydrogenase (NADP(+)) 196653414666563703Rat
1592067Pikfyvephosphoinositide kinase, FYVE-type zinc finger containing96656374766657873Rat
620612Pth2rparathyroid hormone 2 receptor96670605066810034Rat
1596909Tcf19-ps1transcription factor 19, pseudogene 196698752466988262Rat
40952034LOC120094967U4 spliceosomal RNA96703546867035644Rat
1586353Crygfcrystallin, gamma F96744826567450429Rat
2323551Srek1-ps1splicing regulatory glutamic acid and lysine rich protein 1, pseudogene 196757132867632585Rat
3044Map2microtubule-associated protein 296772342267981886Rat
1309976Unc80unc-80 homolog, NALCN channel complex subunit96801194068190135Rat
1564890Rperibulose-5-phosphate-3-epimerase96819102768211295Rat
1590799Kansl1lKAT8 regulatory NSL complex subunit 1-like96821115168316992Rat
2011Acadlacyl-CoA dehydrogenase, long chain96833398168372149Rat
41315872LOC120094878U7 small nuclear RNA96836621168366273Rat
41388248LOC120094910small nucleolar RNA SNORA1796838151668381647Rat
1598796Myl1myosin, light chain 196843751468458256Rat
1590798Pum3-ps2pumilio RNA-binding family member 3, pseudogene 296848084668482298Rat
11464771LOC10835202960S ribosomal protein L32 pseudogene96849757668499086Rat
69416Lancl1LanC like glutathione S-transferase 196851505268548646Rat
2395Cps1carbamoyl-phosphate synthase 196861415368737037Rat
40939110LOC120094918small nucleolar RNA SNORA1796875681568756940Rat
620486Erbb4erb-b2 receptor tyrosine kinase 496952373370596743Rat
41176457LOC120094945U6atac minor spliceosomal RNA96986598769866117Rat
41400105LOC120094804uncharacterized LOC12009480496998441869994916Rat
11489282LOC10835200740S ribosomal protein S10 pseudogene97041881470419577Rat
41242467LOC120094697uncharacterized LOC12009469797064431670744273Rat
1562431RGD1562431similar to chromosome 20 open reading frame 8197085955470861542Rat
1308686Ikzf2IKAROS family zinc finger 297104244071191296Rat
1565062Spag16sperm associated antigen 1697133300572252772Rat
41136363LOC120094917small nucleolar RNA SNORA1797134573571345862Rat
41258697Pgk1-ps2phosphoglycerate kinase 1, pseudogene 297165836071666466Rat
41009382Got2-ps1glutamic-oxaloacetic transaminase 2, pseudogene 197177349471780853Rat
7527018Tubb4b-ps4tubulin, beta 4B class IVb, pseudogene 497185965971861139Rat
41092498LOC120094902small nucleolar RNA SNORA4897215415872154301Rat
1565501Vwc2lvon Willebrand factor C domain containing 2 like97225279372448543Rat
621072Bard1BRCA1 associated RING domain 197261607072694553Rat
41027314LOC120094698uncharacterized LOC12009469897262095572634535Rat
1304586Abca12ATP binding cassette subfamily A member 1297282266172995748Rat
70879Atic5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase97316484673184897Rat
2624Fn1fibronectin 197319604473264695Rat
41139219LOC120094699uncharacterized LOC12009469997326650873283004Rat
7652959LOC102554186uncharacterized LOC10255418697326660673278080Rat
7702950LOC102554284nucleolar protein 56-like97328421273285074Rat
41159026LOC120094960U2 spliceosomal RNA97346505173465140Rat
40935986LOC120094700uncharacterized LOC12009470097352898173537576Rat
7560985LOC102554599uncharacterized LOC10255459997357474073660235Rat
7704514LOC102554970uncharacterized LOC10255497097364905473665651Rat
2325056Set-ps10Set nuclear proto-oncogene, pseudogene 1097366829473670099Rat
40961719Rps10-ps13ribosomal protein S10, pseudogene 1397368711073687806Rat
41087995LOC120094702uncharacterized LOC12009470297374108573768562Rat
1562333Mregmelanoregulin97378672773842081Rat
41218150LOC120094956U2 spliceosomal RNA97385677373856963Rat
11425109LOC108351947uncharacterized LOC10835194797386997373873989Rat
41294134LOC120094954U2 spliceosomal RNA97387425373874443Rat
40944823LOC120094955U2 spliceosomal RNA97388983873890028Rat
2321037Vdac2-ps1voltage-dependent anion channel 2, pseudogene 197389045073891132Rat
41065706LOC120094957U2 spliceosomal RNA97389401373894203Rat
70925Pecrperoxisomal trans-2-enoyl-CoA reductase97389787773926511Rat
1582820Tmem169transmembrane protein 16997392655373950679Rat
3976Xrcc5X-ray repair cross complementing 597395522074044020Rat
1590797Marchf4membrane associated ring-CH-type finger 497407843774196070Rat
7624990LOC102555358uncharacterized LOC10255535897409316074105239Rat
41314403Cks2-ps4CDC28 protein kinase regulatory subunit 2, pseudogene 497412763674133481Rat
1306134Smarcal1Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 197423971874286156Rat
41274183LOC120094703uncharacterized LOC12009470397428912874292893Rat
2319947Rpl37aribosomal protein L37A97429886174300926Rat
41145026LOC120094849uncharacterized LOC12009484997435520874365786Rat
7694989LOC102547940uncharacterized LOC10254794097437430874378142Rat
2873Igfbp2insulin-like growth factor binding protein 297441557474442945Rat
2876Igfbp5insulin-like growth factor binding protein 597445237174464953Rat
41330207LOC120094704uncharacterized LOC12009470497452946374549684Rat
3884Tnp1transition protein 197459446374595072Rat
7642363LOC102548134uncharacterized LOC10254813497459518174603935Rat
1597333Rps8-ps13ribosomal protein S8, pseudogene 1397466460074685585Rat
7564863LOC102548232uncharacterized LOC10254823297470007674708768Rat
7679868LOC102548321uncharacterized LOC10254832197471261774729921Rat
41012662LOC120094705uncharacterized LOC12009470597472996474742441Rat
41020349Dnajb13-ps1DnaJ heat shock protein family (Hsp40) member B13, pseudogene 197480072574801412Rat
41090859LOC120094706uncharacterized LOC12009470697495780274965568Rat
11356775LOC108351950uncharacterized LOC10835195097496106574971838Rat
727910Pinclpregnancy induced noncoding RNA like97498284974999760Rat
11470012LOC108351952uncharacterized LOC10835195297507989475083779Rat
41218353LOC120094707uncharacterized LOC12009470797508380675089665Rat
7648480LOC102554721L-lactate dehydrogenase B chain-like97509364775094902Rat
40950643LOC120094708uncharacterized LOC12009470897519349175225446Rat
40983397LOC120094901small nucleolar RNA SNORA4897531080075310942Rat
68427Tns1tensin 197549188675702853Rat
41102125Rps21-ps7ribosomal protein S21, pseudogene 797564047275640715Rat
1560678Rufy4RUN and FYVE domain containing 497570293775727719Rat
2906Cxcr2C-X-C motif chemokine receptor 297572949375735868Rat
2905Cxcr1C-X-C motif chemokine receptor 197576812475771122Rat
9281499LOC103690558uncharacterized LOC10369055897582005675820840Rat
1305848Arpc2actin related protein 2/3 complex, subunit 297582078275851471Rat
631400Gpbar1G protein-coupled bile acid receptor 197586215175863140Rat
1306281Aampangio-associated, migratory cell protein97586338275869188Rat
2300155PnkdPNKD metallo-beta-lactamase domain containing97586862075937126Rat
1359409Tmbim1transmembrane BAX inhibitor motif containing 197587183575889366Rat
41160873LOC120094710uncharacterized LOC12009471097588047575889459Rat
1596071Catipciliogenesis associated TTC17 interacting protein97594593375953618Rat
1601463Slc11a1solute carrier family 11 member 197595719375968115Rat
1305629Ctdsp1CTD small phosphatase 197597369475979298Rat
2325394Mir26bmicroRNA 26b97597659675976680Rat
1307048Vil1villin 197599114176018860Rat
2319715Usp37ubiquitin specific peptidase 3797601886376118732Rat
41395376Trnap-agg59transfer RNA proline (anticodon AGG) 5997606777276067852Rat
1311495Cnot9CCR4-NOT transcription complex subunit 997608426976109111Rat
41289249LOC120094711uncharacterized LOC12009471197608471676090207Rat
40985578Trnav-aac39transfer RNA valine (anticodon AAC) 3997609924176099313Rat
621025Plcd4phospholipase C, delta 497611552376158602Rat
1309648Zfp142zinc finger protein 14297614105376164784Rat
1359658Bcs1lBCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone97616492576168940Rat
1311557Rnf25ring finger protein 2597617003776176924Rat
1307318Stk36serine/threonine kinase 3697617692276204423Rat
1594742Ttll4tubulin tyrosine ligase like 497622165976258219Rat
727915Cyp27a1cytochrome P450, family 27, subfamily a, polypeptide 197626465576294551Rat
1308698Prkag3protein kinase AMP-activated non-catalytic subunit gamma 397629571576304959Rat
1560357Ppia-ps15peptidylprolyl isomerase A, pseudogene 1597631300576314011Rat
1304559Wnt6Wnt family member 697632988276343523Rat
1307015Wnt10aWnt family member 10A97634993176362400Rat
7718140Pclaf-ps3PCNA clamp associated factor, pseudogene 397638401676392184Rat
1562530Cdk5r2cyclin-dependent kinase 5 regulatory subunit 297641625176417719Rat
628860FevFEV transcription factor, ETS family member97643916476443603Rat
628768Cryba2crystallin, beta A297644725076457968Rat
2325360Mir375microRNA 37597645791176457985Rat
1563002Cfap65cilia and flagella associated protein 6597645921176494199Rat
7506283LOC102549980uncharacterized LOC10254998097649418676502960Rat
620021IhhIndian hedgehog signaling molecule97650431576510532Rat
1359338Nhej1nonhomologous end-joining factor 197652632276622488Rat
2319343LOC100361833ATP synthase lipid-binding protein, mitochondrial-like97654937076549840Rat
1307402Slc23a3solute carrier family 23, member 397662262176633188Rat
735175Cnppd1cyclin Pas1/PHO80 domain containing 197663347576640164Rat
1306844Retreg2reticulophagy regulator family member 297664028276646400Rat
1306260Zfand2bzinc finger AN1-type containing 2B97666546676668447Rat
71077Abcb6ATP binding cassette subfamily B member 697666855476677263Rat
1310450Atg9aautophagy related 9A97667740376688035Rat
1359242Ankzf1ankyrin repeat and zinc finger peptidyl tRNA hydrolase 197668822376695141Rat
1309474Glb1lgalactosidase, beta 1-like97669332576705548Rat
629474Stk16serine/threonine kinase 1697670559176708859Rat
1359623Tuba4atubulin, alpha 4A97670961776714327Rat
7695235LOC102554903uncharacterized LOC10255490397671474776730584Rat
1591035Dnajb2DnaJ heat shock protein family (Hsp40) member B297673106076739278Rat
620777Ptprnprotein tyrosine phosphatase, receptor type, N97674101076756704Rat
40942445LOC120094712uncharacterized LOC12009471297674560976750739Rat
3555Resp18regulated endocrine-specific protein 1897676517976771824Rat
1583848Dnpepaspartyl aminopeptidase97679993176808841Rat
620686Desdesmin97685097976858695Rat
7559628LOC102550477uncharacterized LOC10255047797685832976873352Rat
2124Spegstriated muscle enriched protein kinase97686571476923170Rat
40998509LOC120094713uncharacterized LOC12009471397690245676921926Rat
1560644GmppaGDP-mannose pyrophosphorylase A97692672476934274Rat
11504586LOC108351955uncharacterized LOC10835195597693729576940926Rat
621068Asic4acid sensing ion channel subunit family member 497694153276962900Rat
41266346LOC120094714uncharacterized LOC12009471497694623276947900Rat
1359458Chpfchondroitin polymerizing factor97696317876967878Rat
1306073Obsl1obscurin like cytoskeletal adaptor 197696780276993565Rat
2319152Tmem198transmembrane protein 19897696807976974131Rat
2912Inhainhibin subunit alpha97699446576997366Rat
1305046Stk11ipserine/threonine kinase 11 interacting protein97701229777027989Rat
3712Slc4a3solute carrier family 4 member 397703624377053940Rat
40983058LOC120094715uncharacterized LOC12009471597711987877144297Rat
40977941LOC120094850uncharacterized LOC12009485097752644877540491Rat
11451317LOC108351964uncharacterized LOC10835196497834128378353399Rat
11441754LOC108351966uncharacterized LOC10835196697840676678510208Rat
1564536RGD1564536similar to Cofilin, non-muscle isoform (Cofilin-1)97843364778434301Rat
11492101LOC108351965uncharacterized LOC10835196597851091578541993Rat
41245564LOC120094891small nucleolar RNA SNORA4397857850178578638Rat
1560587Epha4Eph receptor A497881546078958139Rat
41120957LOC120094716uncharacterized LOC12009471697889685178933600Rat
7521510LOC102551060uncharacterized LOC10255106097896537978982823Rat
41022835LOC120094905U1 spliceosomal RNA97935164579351807Rat
40973822LOC120094851uncharacterized LOC12009485197937539879380326Rat
9346176LOC103690559uncharacterized LOC10369055997939681379426093Rat
620431Pax3paired box 397956745579664042Rat
11455030LOC108351956RING finger protein 223-like97968147879684988Rat
40952464LOC120094975U6 spliceosomal RNA97975781579757917Rat
1565739Sgpp2sphingosine-1-phosphate phosphatase 297976265879884665Rat
1303210Farsbphenylalanyl-tRNA synthetase subunit beta97988785279947082Rat
1311644Mogat1monoacylglycerol O-acyltransferase 197998096379988513Rat
7514331LOC102551819U3 small nucleolar RNA-associated protein 14 homolog B-like98012062280129166Rat
70552Acsl3acyl-CoA synthetase long-chain family member 398014099680164636Rat
1302957Kcne4potassium voltage-gated channel subfamily E regulatory subunit 498024342980251533Rat
41018431Trnat-agu20transfer RNA threonine (anticodon AGU) 2098033471680334790Rat
619975Hdac1lhistone deacetylase 1-like98045313980454593Rat
41241510LOC120094717uncharacterized LOC12009471798064940180677567Rat
3626Scg2secretogranin II98080307480808646Rat
6499336Eef1a1-ps8eukaryotic translation elongation factor 1 alpha 1, pseudogene 898086618480867575Rat
40949615LOC120094936small nucleolar RNA SNORA1798087056180870674Rat
1566037Rpsa-ps11ribosomal protein SA, pseudogene 1198091006880912886Rat
1311772Ap1s3adaptor related protein complex 1 subunit sigma 398095040281039685Rat
1305996Wdfy1WD repeat and FYVE domain containing 198103485281092823Rat
41275197Cycs-ps5cytochrome c, somatic, pseudogene 598107866181092612Rat
1309556Mrpl44mitochondrial ribosomal protein L4498110665881111709Rat
11406805LOC10835203040S ribosomal protein S2 pseudogene98111517781116076Rat
3748Serpine2serpin family E member 298112474681188866Rat
1589866Fam124bfamily with sequence similarity 124 member B98151494781533869Rat
1308190Cul3cullin 398159264181670428Rat
6498359LOC100910493ras-related protein Rab-18-like98178454981786163Rat
1561963Dock10dedicator of cytokinesis 1098184359982101540Rat
1306139Rnf11l2ring finger protein 11-like 298218177982183568Rat
9171458Nyap2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 298240679782658250Rat
41266326LOC120094719uncharacterized LOC12009471998316197583182540Rat
11449647LOC108352031glyceraldehyde-3-phosphate dehydrogenase pseudogene98336527983366295Rat
7570114LOC102553709uncharacterized LOC10255370998344640383484732Rat
2922Irs1insulin receptor substrate 198355296483605797Rat
1306477Rhbdd1rhomboid domain containing 198363003783748690Rat
41299434LOC120094720uncharacterized LOC12009472098370011483711914Rat
41300199LOC120094721uncharacterized LOC12009472198382906283863252Rat
1305355Col4a4collagen type IV alpha 4 chain98383317383875436Rat
71085Col4a3collagen type IV alpha 3 chain98387595884004955Rat
1310230Mffmitochondrial fission factor98400779884036039Rat
1588633Tm4sf20transmembrane 4 L six family member 2098403871584052615Rat
41118077LOC120094722uncharacterized LOC12009472298404353984047154Rat
9197887LOC103690566ice-structuring glycoprotein-like98405615984056734Rat
41192800LOC120094723uncharacterized LOC12009472398407402184082651Rat
1560041Agfg1ArfGAP with FG repeats 198412487884178149Rat
11476313LOC10835200460S ribosomal protein L30-like98426224084265380Rat
1311413Slc19a3solute carrier family 19 member 398427572284299368Rat
3646Ccl20C-C motif chemokine ligand 2098438903184391629Rat
1561436Daw1dynein assembly factor with WD repeats 198443555284472632Rat
1311951SphkapSPHK1 interactor, AKAP domain containing98450938384657582Rat
41106528LOC120094724uncharacterized LOC12009472498501268385038789Rat
1334135Or5ak27-ps1olfactory receptor family 5 subfamily AK member 27, pseudogene 198505117685051964Rat
41331248LOC120094919small nucleolar RNA SNORA1798517594485176070Rat
1560766Pid1phosphotyrosine interaction domain containing 198528433585503035Rat
1359385Dnerdelta/notch-like EGF repeat containing98558698585902820Rat
41173954LOC120094725uncharacterized LOC12009472598568638485693986Rat
1306607Trip12thyroid hormone receptor interactor 1298591669186043312Rat
1307870Fbxo36F-box protein 3698604252286107220Rat
40992437LOC120094726uncharacterized LOC12009472698608361486085120Rat
1309675Slc16a14solute carrier family 16, member 1498611006686137546Rat
7595527LOC102550706uncharacterized LOC10255070698611970286126905Rat
40957244LOC120094727uncharacterized LOC12009472798613731486139788Rat
1310830Csprscomponent of Sp100-rs98616578386174596Rat
1310173Sp110SP110 nuclear body protein98620050386225355Rat
1306355Sp140SP140 nuclear body protein98622447286274724Rat
1359550Sp100SP100 nuclear antigen98631099086377036Rat
1563917RGD1563917similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa)98638177786405385Rat
9334462LOC103690562uncharacterized LOC10369056298640947386421040Rat
1565945Rps10-ps8ribosomal protein S10, pseudogene 898642216286422790Rat
41200243LOC120094728uncharacterized LOC12009472898644420386453311Rat
1306390Cab39calcium binding protein 3998646300886524545Rat
40949588LOC120094729uncharacterized LOC12009472998652439486545913Rat
1309503Itm2cintegral membrane protein 2C98654592786559745Rat
41289198LOC120094894U1 spliceosomal RNA98656550586565670Rat
1559828Gpr55G protein-coupled receptor 5598658490686640601Rat
1561755RGD1561755similar to Signal Recognition Particle Alu Rna Binding Heterodimer, Srp91498664582986649077Rat
41119897LOC120094730uncharacterized LOC12009473098664897086663626Rat
1308164Spata3spermatogenesis associated 398666035286672272Rat
41266300LOC120094731uncharacterized LOC12009473198668501986707213Rat
2318569LOC100362216hypothetical protein LOC10036221698669176786699920Rat
621669Psmd1proteasome 26S subunit, non-ATPase 198670971486785213Rat
61801Htr2b5-hydroxytryptamine receptor 2B98673579386756640Rat
1305615Armc9armadillo repeat containing 998680279186928860Rat
40970647LOC120094732uncharacterized LOC12009473298687081486874105Rat
7690483LOC102548542uncharacterized LOC10254854298689060086956019Rat
41055286Trnap-agg49transfer RNA proline (anticodon AGG) 4998693189386931965Rat
41018300LOC120094733uncharacterized LOC12009473398694832786954272Rat
1310580B3gnt7UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 798695622086960171Rat
3153Nclnucleolin98699958887008112Rat
41013737LOC120094881small nucleolar RNA SNORA7598700024887000384Rat
41153847LOC120094885small nucleolar RNA SNORD2098700106887001147Rat
40940351LOC120094883small nucleolar RNA SNORD8298700451587004586Rat
619867Nmur1neuromedin U receptor 198703323187038070Rat
1564629Tex44testis expressed 4498707568487077102Rat
7714518LOC102548729uncharacterized LOC10254872998709320987102973Rat
41138001LOC120094734uncharacterized LOC12009473498709647687113703Rat
41309199LOC120094735uncharacterized LOC12009473598713565287154677Rat
61829Ptmaprothymosin alpha98717625187180333Rat
41025224LOC120094736uncharacterized LOC12009473698718430287194314Rat
41178953LOC120094949small nucleolar RNA U1398719052987190633Rat
1306204Pde6dphosphodiesterase 6D98719299187237926Rat
40940829Trnav-aac37transfer RNA valine (anticodon AAC) 3798721626887216349Rat
1306918Cops7bCOP9 signalosome subunit 7B98723813287263967Rat
620850Nppcnatriuretic peptide C98732005187324251Rat
1560168Dis3l2DIS3-like 3'-5' exoribonuclease 298735540987736616Rat
2322949Nsa2-ps1NSA2 ribosome biogenesis factor, pseudogene 198759060687591465Rat
1583637Rpl21-ps1ribosomal protein L21, pseudogene 198763513387635684Rat
1565100Alpgalkaline phosphatase, germ cell98774872187761500Rat
2325055Alppalkaline phosphatase, placental98776584687768606Rat
2099Alpialkaline phosphatase, intestinal98777341187776877Rat
41363602LOC120094871U6 spliceosomal RNA98779243687792530Rat
621650Akp3alkaline phosphatase 3, intestine, not Mn requiring98780474987807866Rat
61806Ecel1endothelin converting enzyme-like 198781443487829154Rat
1563955Prss56serine protease 5698784280687859978Rat
2352Chrndcholinergic receptor nicotinic delta subunit98786241787870833Rat
2354Chrngcholinergic receptor nicotinic gamma subunit98787808587884193Rat
1307790Eif4e2eukaryotic translation initiation factor 4E family member 298788607887901058Rat
41329502LOC120094860U6 spliceosomal RNA98792549287925595Rat
1559565Efhd1EF-hand domain family, member D198793825987984917Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10359D9Got10923298788122287881453Ratregion
10403D9Wox811896647532866475449Ratregion
10404D9Mit219896643705266437242Ratregion
10411D9Mgh414196745134667451485Ratregion
10658D9Wox1518494941569249415876Ratregion
10807D9Wox1012397699412376994246Ratregion
10965D9Arb525798700863587008898Ratregion
33999D9Mit514297781389477814038Ratregion
34013D9Mit314495816286358163035Ratregion
34088D9Mgh211098636963186369743Ratregion
11296D9Arb312497594962675949750Ratregion
11312D9Bro116697702634377026453Ratregion
36009D9Rat5414998131436481314513Ratregion
36059D15Rat3016297450771274507902Ratregion
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36155D9Rat913697739687677397012Ratregion
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Position Markers

Peak: (D9Rat15)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2965,383,789 - 65,383,934 (+)MAPPER
Rnor_6.0970,686,742 - 70,686,886NCBI
Rnor_5.0971,887,822 - 71,887,966UniSTS
RGSC_v3.4962,634,672 - 62,634,991RGD
RGSC_v3.4962,634,744 - 62,634,888UniSTS
RGSC_v3.1962,781,726 - 62,781,870RGD
Celera962,794,142 - 62,794,286UniSTS
RH 3.4 Map9551.9UniSTS
RH 3.4 Map9551.9RGD
RH 2.0 Map9613.3RGD
SHRSP x BN Map944.4198RGD
FHH x ACI Map942.29RGD
Flank 2: (D9Rat63)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2942,791,513 - 42,791,750 (+)MAPPER
Rnor_6.0947,248,965 - 47,249,201NCBI
Rnor_5.0946,933,155 - 46,933,391UniSTS
RGSC_v3.4939,691,558 - 39,691,794UniSTS
RGSC_v3.4939,691,557 - 39,691,794RGD
RGSC_v3.1939,692,972 - 39,693,208RGD
Celera940,535,370 - 40,535,606UniSTS
RH 3.4 Map9415.8UniSTS
RH 3.4 Map9415.8RGD
RH 2.0 Map9409.9RGD
SHRSP x BN Map937.6898RGD
Cytogenetic Map9q21UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
1598823Memor16Memory QTL 161.9exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)92213332249968732Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)92375402458157242Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)92375402461381613Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)92746863972468639Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)93696235977814038Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
6903941Pur31Proteinuria QTL 310.036urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
6903937Bp356Blood pressure QTL 3560.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94790220852283252Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
1598849Memor17Memory QTL 172.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)94996854671098346Rat
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95584784177026453Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)95662771378595166Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
1578659Tspe1Trichinella spiralis expulsion QTL 14.8parasite quantity (VT:0010441)logarithm of the intestinal adult Trichinella spiralis count (CMO:0002024)96138143465691299Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97665062976771824Rat
4889852Pur26Proteinuria QTL 26150.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)977813894101597663Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)977813894111552878Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)97927151191616855Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)97927151191616855Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97927151191616855Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)98636963192058970Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 6 months old 126 F2 males 10053640
qtl_general software package used: ANOVA, MAPMAKER/EXP 3.0, MAPMAKER/QTL 1.1 10053640
qtl_general measurement method: animals were restraint in a cylindrical wire cage for 30 minutes; after one week they were decapitated and adrenals were weighed relative adrenal mass was calculated as mg/100g of body weight 10053640
qtl_general confidence interval: 30-74 Mb 10053640