Gmadr4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Gmadr4 (Adrenal mass QTL 4) Rattus norvegicus

Symbol: Gmadr4
Name: Adrenal mass QTL 4
RGD ID: 10054141
Previously known as: adrenal gland weight 9
Trait: adrenal gland mass   (VT:0010420)    
Measurement Type: both adrenal glands wet weight   (CMO:0000164)    
LOD Score: 2.45
P Value: 0.0074
Variance: 9.6
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr891 - 21,707,400RGD_MAPPER_PIPELINE
mRatBN7.291 - 14,209,783RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.091 - 16,520,166RGD_MAPPER_PIPELINERnor6.0
Rnor_5.091 - 15,427,460RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.491 - 9,405,916RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: ISIAH WAG/Nov 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
ISIAH  (IEA)
WAG/Nov  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic control of the corticosterone level at rest and under emotional stress in ISIAH rats with inherited stress-induced arterial hypertension. Redina OE, etal., Clin Exp Hypertens. 2010;32(6):364-71. doi: 10.3109/10641961003628502.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41314784Arhgap20-ps1Rho GTPase activating protein 20, pseudogene 19350679356712Rat
9092856LOC103691580uncharacterized LOC1036915809361381366432Rat
1587228Ralbp1-ps1ralA binding protein 1, pseudogene 19369017372317Rat
41183083Naa11-ps17N(alpha)-acetyltransferase 11, NatA catalytic subunit, pseudogene 179412259412903Rat
1586098Nid2-ps14nidogen 2, pseudogene 149534980555257Rat
628680Uxs1UDP-glucuronate decarboxylase 19653740731121Rat
6490497Rps8-ps14ribosomal protein S8, pseudogene 149663722664348Rat
7694240Zfp119blzinc finger protein 119b like9746126775933Rat
41079714LOC120094900small nucleolar RNA SNORA489756175756311Rat
1589467Ebi3Epstein-Barr virus induced 39774252787544Rat
2324265Rps21-ps2ribosomal protein S21, pseudogene 29778351781683Rat
1589601Yju2YJU2 splicing factor9789603799505Rat
1590885Shdsrc homology 2 domain-containing transforming protein D9799652809769Rat
1583850Fsd1fibronectin type III and SPRY domain containing 19818241821761Rat
1566020Stap2signal transducing adaptor family member 29828369838648Rat
1589335MpndMPN domain containing9839473846446Rat
708456Sh3gl1SH3 domain containing GRB2 like 1, endophilin A29842285869753Rat
1590865Chaf1achromatin assembly factor 1 subunit A9873953900701Rat
1590866Ubxn6UBX domain protein 69900883906047Rat
621013Hdgfl2HDGF like 29909581929195Rat
1590867Plin4perilipin 49929168938062Rat
1589602Plin5perilipin 59939745946188Rat
1359464Lrg1leucine-rich alpha-2-glycoprotein 19947516949773Rat
69278Sema6bsemaphorin 6B9950939967905Rat
1588574Tnfaip8l1TNF alpha induced protein 8 like 19988587999342Rat
1589603Mydgfmyeloid-derived growth factor99996591008804Rat
1588575Dpp9dipeptidyl peptidase 9910113471046337Rat
9462719LOC103693194uncharacterized LOC103693194910463671049446Rat
1591762Rpl35l3ribosomal protein L35 like 3910781911088987Rat
2325434Mir9microRNA 9910802741080383Rat
41256487LOC120094864U6 spliceosomal RNA910807461080852Rat
1561112Fem1afem-1 homolog A910916951093901Rat
1590868Ticam1TIR domain containing adaptor molecule 1911025591111023Rat
1595854Plin3perilipin 3911111781123057Rat
1591748Arrdc5arrestin domain containing 5911266441132736Rat
1595855Uhrf1ubiquitin-like with PHD and ring finger domains 1911331171154639Rat
2323707Rps27l3ribosomal protein S27 like 3911547811157065Rat
1588576Kdm4blysine demethylase 4B911587371237233Rat
11473325Trnak-cuu11transfer RNA lysine (anticodon CUU) 11912111441211216Rat
3452Ptprsprotein tyrosine phosphatase, receptor type, S912454081307015Rat
1563631Znrf4zinc and ring finger 4913533081354496Rat
9685200TincrTINCR ubiquitin domain containing913871051389337Rat
1588577Safb2scaffold attachment factor B2913958521417010Rat
620613Safbscaffold attachment factor B914174491438408Rat
1588578Micos13mitochondrial contact site and cristae organizing system subunit 13914398411441782Rat
62085Rpl36ribosomal protein L36914419861447397Rat
621598Lonp1lon peptidase 1, mitochondrial914474441459771Rat
1594167Catsperdcation channel sperm associated auxiliary subunit delta914599671498342Rat
1589604Ranbp3RAN binding protein 3915072331544460Rat
41237504Capscalcyphosine915445971545631Rat
1303340Vmacvimentin-type intermediate filament associated coiled-coil protein915467471550417Rat
1303292Ndufa11NADH:ubiquinone oxidoreductase subunit A11915504871554546Rat
1588473Fut4-ps1fucosyltransferase 4, pseudogene 1915696051572022Rat
621494Nrtnneurturin915818601587835Rat
1563228Dus3ldihydrouridine synthase 3-like915934911598663Rat
1595447Prr22proline rich 22915991691601003Rat
1588579Rfx2regulatory factor X2916046361671220Rat
41282109LOC120094598uncharacterized LOC120094598916455991648694Rat
1589605Myl12b-ps2myosin light chain 12B, pseudogene 2916783361679276Rat
1588580Acsbg2acyl-CoA synthetase bubblegum family member 2916838461715517Rat
1595856Acsbg3acyl-CoA synthetase bubblegum family member 3917156131727637Rat
1588581Mllt1MLLT1, super elongation complex subunit917310771775985Rat
41213696LOC120094875U7 small nuclear RNA917514281751490Rat
41215231Bnip3-ps5BCL2 interacting protein 3, pseudogene 5917880411788770Rat
1588582Acer1alkaline ceramidase 1917943401824432Rat
1588583Clppcaseinolytic mitochondrial matrix peptidase proteolytic subunit918316801837700Rat
1598126Alkbh7alkB homolog 7918388861841044Rat
3432Pspnpersephin918409061841748Rat
1359646Gtf2f1general transcription factor IIF subunit 1918440271853455Rat
621828KhsrpKH-type splicing regulatory protein918625551872403Rat
1588585Slc25a41solute carrier family 25, member 41918736921881405Rat
1588586Slc25a23solute carrier family 25 member 23918826361898369Rat
1565035Crb3crumbs cell polarity complex component 3918985311903860Rat
1590869Dennd1cDENN domain containing 1C919040401916329Rat
619730Tubb4atubulin, beta 4A class IVa919178411925286Rat
40940879LOC120094884U1 spliceosomal RNA919317161931879Rat
727974Tnfsf9TNF superfamily member 9919440171946351Rat
1588543Brcc3BRCA1/BRCA2-containing complex subunit 3919869421989484Rat
1588573Cd70Cd70 molecule920065632009715Rat
1588572Tnfsf14TNF superfamily member 14920682952073128Rat
2232C3complement C3920874372114366Rat
735149Gpr108G protein-coupled receptor 108921207402131771Rat
621145Trip10thyroid hormone receptor interactor 10921330852147795Rat
2322080Sh2d3aSH2 domain containing 3A921488032158150Rat
3951Vav1vav guanine nucleotide exchange factor 1921619852209951Rat
1359214Adgre1adhesion G protein-coupled receptor E1922424762398000Rat
7651541Hspa14-ps1heat shock protein family A (Hsp70) member 14, pseudogene 1922662852282720Rat
9391503LOC103690497U1 small nuclear ribonucleoprotein C pseudogene923542732354832Rat
1626052Vom2r-ps140vomeronasal 2 receptor, pseudogene 140924364302449682Rat
1588571Vom2r79vomeronasal 2 receptor, 79925058972553420Rat
1592341Vom2r-ps141vomeronasal 2 receptor, pseudogene 141925977032598602Rat
41402348Spetex2el6Spetex-2E protein like 6926188462636236Rat
41024372Pym1-ps6PYM homolog 1, exon junction complex associated factor, pseudogene 6926297702630658Rat
41041708Derl1-ps1derlin 1, pseudogene 1926532082655994Rat
41286286Spetex2dl1Spetex-2D protein like 1926796342683539Rat
41381625Derl1-ps3derlin 1, pseudogene 3926982822699629Rat
41293541Spetex2dl2Spetex-2D protein like 2927234222732885Rat
6489022Pym1-ps16PYM homolog 1, exon junction complex associated factor, pseudogene 16927346382735529Rat
41309847Derl1-ps2derlin 1, pseudogene 2927596502761098Rat
1589919Rcn1-ps18reticulocalbin 1, pseudogene 18927735362775324Rat
41255155Pcbp4-ps4poly(rC) binding protein 4, pseudogene 4927798932781482Rat
41009526Spetex2el7Spetex-2E protein like 7927856782793791Rat
41219852Pym1-ps7PYM homolog 1, exon junction complex associated factor, pseudogene 7928200412822123Rat
1594784Spetex2el1Spetex-2E protein like 1928494532889694Rat
2321302Spetex2l2Spetex-2 protein like 2929076642916404Rat
11447770Spetex2el2Spetex-2E protein like 2929253032935352Rat
41204078Rcn1-ps14reticulocalbin 1, pseudogene 14929460592947361Rat
41156996LOC120094610derlin-1-like929538292955222Rat
41342146LOC120094615uncharacterized LOC120094615930091093017536Rat
41298242Spetex2el10Spetex-2E protein like 10930294263052318Rat
41269133Derl1-ps4derlin 1, pseudogene 4930711233072058Rat
41156720Rcn1-ps8reticulocalbin 1, pseudogene 8930854493087638Rat
41198719Pcbp4-ps5poly(rC) binding protein 4, pseudogene 5930922003093599Rat
41390282Spetex2el5Spetex-2E protein like 5930975823106904Rat
41298228Spetex2el9Spetex-2E protein like 9931157533129689Rat
2318601C1h9orf40-ps1similar to human chromosome 9 open reading frame 40, pseudogene 1931443063145830Rat
7657956LOC102554555uncharacterized LOC102554555931770153216869Rat
41061308LOC120094622uncharacterized LOC120094622932296813242765Rat
41046919LOC120094621uncharacterized LOC120094621932419683264057Rat
1305941Plcl2phospholipase C-like 2932925643477009Rat
1561626Tbc1d5TBC1 domain family, member 5935033284017131Rat
41370247Ndufb1-ps1NADH:ubiquinone oxidoreductase subunit B1, pseudogene 1935950303595591Rat
7751678Rpl10-ps10ribosomal protein L10, pseudogene 10936163773621886Rat
41168059LOC120094782uncharacterized LOC120094782936842543705902Rat
2323094Rps20-ps12ribosomal protein S20, pseudogene 12941590734159432Rat
41161618LOC120094889small nucleolar RNA SNORA44942814814281609Rat
11357182LOC10835201660S ribosomal protein L26 pseudogene943833894383798Rat
1305561Satb1SATB homeobox 1946778174773061Rat
1562851Rpl31-ps7ribosomal protein L31, pseudogene 7948447734845186Rat
2323380Fcf1-ps6Fcf1 rRNA-processing protein, pseudogene 6949327784949393Rat
2549Kcnh8potassium voltage-gated channel subfamily H member 8955060445945828Rat
40981102LOC120094948U1 spliceosomal RNA957772475777398Rat
41072519Rps17-ps11ribosomal protein S17, pseudogene 11958984675905781Rat
41266739LOC120094624uncharacterized LOC120094624959646216246324Rat
1559808Rps26-ps12ribosomal protein S26, pseudogene 12960190316020447Rat
7538729Cfl1-ps4cofilin 1, pseudogene 4960564456057501Rat
1562800Spetex2l1Spetex-2 protein like 1961724896180127Rat
2323495Gosr1-ps1golgi SNAP receptor complex member 1, pseudogene 1962500516250572Rat
1596997Rbbp4-ps1RB binding protein 4, chromatin remodeling factor, pseudogene 1962818786283078Rat
1566407EfhbEF hand domain family, member B963721916441678Rat
9400366LOC103690615transmembrane protein 234-like963822126382523Rat
41399553LOC120094882small nucleolar RNA SNORA70963843726384506Rat
41144581Trnas-aga49transfer RNA serine (anticodon AGA) 49964455866445666Rat
620936Rab5aRAB5A, member RAS oncogene family964839066512877Rat
1564811Pp2d1protein phosphatase 2C-like domain containing 1965122826533653Rat
1305902Kat2blysine acetyltransferase 2B965625256667064Rat
41403358LOC120094907small nucleolar RNA SNORA48966078666608000Rat
1593238Sgo1shugoshin 1966721096687908Rat
15649864932415M13RiklRIKEN cDNA 4932415M13 gene like967079916732613Rat
621064Sult1c2sulfotransferase family 1C member 2968248406848830Rat
1305885Sult1c2asulfotransferase family 1C member 2A968736976904736Rat
40953770LOC120094625uncharacterized LOC120094625969564486962274Rat
41320429LOC120093086sulfotransferase 1C2-like969626047131268Rat
1559960Sult1c2al1sulfotransferase family 1C member 2A like 1971612167203145Rat
3768Sult1c3sulfotransferase family 1C member 3972215807266991Rat
1560901Acta1-ps2actin, alpha 1, skeletal muscle, pseudogene 2975012257502327Rat
69270Slc5a7solute carrier family 5 member 7975954407626258Rat
1592929Eif4g1-ps2eukaryotic translation initiation factor 4 gamma 1, pseudogene 2978568797861321Rat
1589660Taldo1-ps1transaldolase 1, pseudogene 1982753008276318Rat
2322325Fbxw2-ps1F-box and WD repeat domain containing 2, pseudogene 1983847868389434Rat
41279270Fbxw2-ps4F-box and WD repeat domain containing 2, pseudogene 4983940838398728Rat
6496783Fbxw2-ps3F-box and WD repeat domain containing 2, pseudogene 3984033958408043Rat
9112006Rpl27al9ribosomal protein L27A like 9985164298517495Rat
41143660Hnrnpd-ps2heterogeneous nuclear ribonucleoprotein D, pseudogene 2987123408713866Rat
1559663St6gal2ST6 beta-galactoside alpha-2,6-sialyltransferase 2991817449274161Rat
1588569Vom2r76vomeronasal 2 receptor, 76994679619492317Rat
7556959Sik3-ps1SIK family kinase 3, pseudogene 1995068299510000Rat
1582883Vom2r77vomeronasal 2 receptor, 77995728749638896Rat
1582873Pot1bprotection of telomeres 1B996703559728624Rat
40935681LOC120094870U6 spliceosomal RNA996740979674202Rat
7642378N4bp1-ps2Nedd4 binding protein 1, pseudogene 2997173159720322Rat
1359641Adgre4adhesion G protein-coupled receptor E4997581069901908Rat
11438663LOC10835187660S ribosomal protein L7 pseudogene997649519765788Rat
1590872Vom2r-ps138vomeronasal 2 receptor, pseudogene 138999264929946415Rat
1583959LOC691414hypothetical protein LOC691414999547209964136Rat
9281506Spetex2gl1Spetex-2G protein like 19997335310002936Rat
11396250Spetex2el3Spetex-2E protein like 391002522110036771Rat
41389612LOC120094832ERC protein 2-like91005061210051922Rat
41041357Rcn1-ps7reticulocalbin 1, pseudogene 791006702710067832Rat
1588537Spetex-2fl1Spetex-2F protein like 191007694910085216Rat
1591345Girdinl1girders of actin filaments like 191066477010683943Rat
1591714Dazldeleted in azoospermia-like91069559310712330Rat
1563347Rftn1raftlin lipid raft linker 191080461111002084Rat
1584839Kcnk16-ps1potassium two pore domain channel subfamily K member 16, pseudogene 191105906911064995Rat
621070Kif6kinesin family member 691107620311373205Rat
1306128Daam2dishevelled associated activator of morphogenesis 291142891311546982Rat
1308471Mocs1molybdenum cofactor synthesis 191154753311573935Rat
41285703LOC120094630uncharacterized LOC12009463091157517911591773Rat
11484729LOC108351887uncharacterized LOC10835188791165233911678809Rat
6494554Rpl5-ps2ribosomal protein L5, pseudogene 291166787811669951Rat
40988429LOC120094938U1 spliceosomal RNA91170829711708457Rat
41218959LOC120094631uncharacterized LOC12009463191181960811833871Rat
2322726Kin-ps1Kin17 DNA and RNA binding protein, pseudogene 191183393011835584Rat
7650881LOC102547352uncharacterized LOC10254735291188214611883458Rat
1311831Lrfn2leucine rich repeat and fibronectin type III domain containing 291189742512066177Rat
7683517LOC102547709uncharacterized LOC10254770991225737912272305Rat
41031628LOC120094909small nucleolar RNA SNORA1791238394412384075Rat
7706024LOC102547840uncharacterized LOC10254784091241534912423539Rat
41295786LOC120094632uncharacterized LOC12009463291241647712417396Rat
7570521LOC102548200uncharacterized LOC10254820091244695312450780Rat
1587368Unc5clunc-5 family C-terminal like91252810912543382Rat
1594018Tspo2translocator protein 291254461512548563Rat
1308727Apobec2apolipoprotein B mRNA editing enzyme catalytic subunit 291256495512578461Rat
1308299Oard1O-acyl-ADP-ribose deacylase 191257689412587264Rat
70976Nfyanuclear transcription factor Y subunit alpha91258743712613911Rat
1565175Treml1triggering receptor expressed on myeloid cells-like 191263558412642324Rat
1309841Trem2triggering receptor expressed on myeloid cells 291264760512654190Rat
7629065LOC102548435uncharacterized LOC10254843591266494012672794Rat
1307182B430306N03RiklRIKEN cDNA B430306N03 gene91268129012690555Rat
1587039Treml2triggering receptor expressed on myeloid cells-like 291269445312705379Rat
1587021Treml4triggering receptor expressed on myeloid cells-like 491271896812743879Rat
1305477Trem3triggering receptor expressed on myeloid cells 391274982112762547Rat
1309467Trem1triggering receptor expressed on myeloid cells 191276381912779285Rat
1311406Ncr2natural cytotoxicity triggering receptor 291277719512828437Rat
1585869Ncr2l1natural cytotoxicity triggering receptor 2 like 191284354212858881Rat
41022215LOC120094839uncharacterized LOC12009483991285926412864171Rat
1565959RGD1565959RGD156595991287369712886364Rat
15858341700067P10RiklRIKEN cDNA 1700067P10 gene like91289529412896592Rat
64928821700122O11RiklRIKEN cDNA 1700122O11 gene like91293744412943012Rat
7594246LOC102554116uncharacterized LOC10255411691303256913038429Rat
1311386Foxp4forkhead box P491305850613115406Rat
1560271MdfiMyoD family inhibitor91315680613175218Rat
1309583Tfebtranscription factor EB91319889013254726Rat
3943Pgcprogastricsin91325746213265682Rat
7710987LOC102554309uncharacterized LOC10255430991326177413266883Rat
1310226Frs3fibroblast growth factor receptor substrate 391328855913297285Rat
1563979Prickle4prickle planar cell polarity protein 491329749413305635Rat
1583567Tomm6translocase of outer mitochondrial membrane 691330426913305637Rat
1310513Usp49ubiquitin specific peptidase 4991330564013366132Rat
1306415Med20mediator complex subunit 2091337014613382756Rat
727959Byslbystin-like91338280613392557Rat
2293Ccnd3cyclin D391339416113400341Rat
41179785LOC120094634uncharacterized LOC12009463491341234313489689Rat
1308423Taf8TATA-box binding protein associated factor 891349189213511713Rat
1561662C9h6orf132similar to human chromosome 6 open reading frame 13291352482213561756Rat
6485345Cimip3ciliary microtubule inner protein 391356066913582987Rat
40926438LOC120094981U6 spliceosomal RNA91358758613587697Rat
1308712Guca1aguanylate cyclase activator 1A91358898813598566Rat
1308191Guca1bguanylate cyclase activator 1B91359961913607455Rat
1311516Mrps10mitochondrial ribosomal protein S1091361489713624819Rat
1307167Trerf1transcriptional regulating factor 191363161913858326Rat
41291055LOC120094873U6 spliceosomal RNA91380992913810029Rat
41188929LOC120094859U6 spliceosomal RNA91389540213895505Rat
1593237Ubr2ubiquitin protein ligase E3 component n-recognin 291398242714062315Rat
41372167LOC120094984U6 spliceosomal RNA91405162814051732Rat
3549Prph2peripherin 291406614914081454Rat
1306756Tbcctubulin folding cofactor C91409885514100043Rat
1305680BicralBICRA like chromatin remodeling complex associated protein91410025314185368Rat
1308469Rpl7l1ribosomal protein L7-like 191419810114206119Rat
41065341LOC120093043small nucleolar RNA SNORA1991420347414203604Rat
1596723Pex39peroxisomal biogenesis factor 3991420798814209134Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10252D7Mit1213691077552010775580Ratregion
34264D9Mgh5167958577835857951Ratregion
36151D9Rat4615991076977510769932Ratregion
37468D9Rat162221933686523368873Ratregion
37634D9Rat7921991420956414209783Ratregion
37692D9Rat8222091131173811311958Ratregion
37776D9Rat8819891112370211123900Ratregion
36510D9Rat409291401384014013932Ratregion
35623D9Rat4112691353377013533896Ratregion
35695D9Rat44169951098265109995Ratregion
35733D9Rat45164942953494295513Ratregion
40170D9Rat13513191176556411765695Ratregion
41218D9Rat13413491345703913457174Ratregion
41272D9Rat139127958596955859822Ratregion
41490D9Rat138145985680328568177Ratregion
44549D9Got1511591173586111735976Ratregion
44550D9Got1226391102999111030254Ratregion
44551D9Got1440091184997111850371Ratregion
44553D9Got1615191338053513380686Ratregion
44555D9Got14024391364766013647903Ratregion
44555D9Got14024391364766013648039Ratregion
60643D9Got10172976083627608534Ratregion
60652D9Got1316491124880511248969Ratregion
60657D9Got139184917301621730346Ratregion
60659D9Got2151950127845012935Ratregion
60661D9Got3292948016044801896Ratregion
60662D9Got4137935572663557403Ratregion
60663D9Got5120934920473492167Ratregion
60667D9Got6174948015994801772Ratregion
60668D9Got7192946752864675478Ratregion
60669D9Got8286943017314302019Ratregion
60670D9Got9145959002275900374Ratregion
60825D9Wox20110987630218763131Ratregion
60826D9Wox22152979545577954713Ratregion
60827D9Wox23160979545567954720Ratregion
1303360D9Got200208911858441186050Ratregion
62508D9Uia1141992644979264638Ratregion
631290D9Wox2499910245371024636Ratregion
1630338D9Got20225791390887313909130Ratregion
1631969D9Wox2817791340125813401435Ratregion
1641215D9Cebr3178934786283478806Ratregion
1639864D9Wox411289951427951555Ratregion
1636087D9Wox4415091340079313400943Ratregion
1636259D9Cebr123791087323910873477Ratregion
1637006D9Got245229982103738210602Ratregion
1632443D9Got1273921580852158360Ratregion
1634267D9Got231267987777998778067Ratregion
7205916D2S21540969439706944119Ratregion
5036191D17Wsu104e231910015471001778Ratregion
7206552UniSTS:547044781918834531884234Ratregion
7206560UniSTS:547057266918737081873974Ratregion
5037011AU04991518791372180413721991Ratregion
5037183RH911021419827981828122Ratregion
5028595AU015179126919036601903786Ratregion
5028637RH125689201987138678714067Ratregion
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7205848GAK__6772498940872574087688Ratregion
5031526AU048038185954782085478393Ratregion
5031956AU046569252955622245562477Ratregion
5026628RH13293519891258627212586470Ratregion
5026696RH13318516591420455214204717Ratregion
5026726RH13330119591330576713305962Ratregion
5029383RH144584188921189532119141Ratregion
5032167RH126039217918440381844255Ratregion
5026958RH13418520491406528114065485Ratregion
5034992Nrtn101915821001582201Ratregion
5029919BE10318319791188325611883453Ratregion
5030057AW53151121791107622111076438Ratregion
5035204BE09855015991350193413502093Ratregion
5027723SGC32809133919186421918775Ratregion
5027763RH9464616891406617114066339Ratregion
5033153RH13779517791202572712025900Ratregion
5025204RH12741638391330514913305532Ratregion
5027819RH9486719091261161312611803Ratregion
5028195D17Mit88146921154952115641Ratregion
5033551RH13923912191261363012613751Ratregion
5033593RH139393238912368741237112Ratregion
5031029BE12123316791310130613101473Ratregion
5033751RH13998719091252832412528514Ratregion
5025782RH129643189918405831840772Ratregion
5025868RH130001197918374741837671Ratregion
5055955RH144099208918688391869047Ratregion
5051725RH94621149922087682208917Ratregion
5053913RH14292324391096244910962692Ratregion
5054397RH14320114191406055214060693Ratregion
5052147RH9486619091261160312611793Ratregion
5055353RH143752104911590571159161Ratregion
5054461RH143237249987133198713568Ratregion
5059382AW53053715891358281213582970Ratregion
5054743RH143400760914553461456106Ratregion
5057882BF39288114391242318312423326Ratregion
5055161RH14364113091266532212665452Ratregion
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5052551U05252157946812684681425Ratregion
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5059840BF38800815591416806114168216Ratregion
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5052555AU0409091459901143901288Ratregion
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5050802RH1342661849809550809734Ratregion
5044466RH13061918091108912311089303Ratregion
5044588RH13069019591409896214099157Ratregion
5044610RH13070319591311505713115252Ratregion
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5043762RH130212189919888281989019Ratregion
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5045636RH131291196931443923144593Ratregion
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5041724RH129022183968755546875737Ratregion
5044612RH130704302920875292087831Ratregion
5046328RH131689551919031241903675Ratregion
5045328RH131115215934763233476538Ratregion
5047532RH13238120991261158012611789Ratregion
5045998RH131500190921208542121044Ratregion
5046012RH131508214934790803479294Ratregion
5049384RH133450189972216527221841Ratregion
5049430RH133476180987148138714993Ratregion
5046956RH132051205913959381396143Ratregion
5048190RH132760183965295126529695Ratregion
5048574RH1329821959929247929442Ratregion
5040042RH12805621491403217014032384Ratregion
5039458RH12771718591406201514062200Ratregion
5042154RH129271150965148486514998Ratregion
5042204RH12929921091330538513305595Ratregion
5043066RH129812187910015861001773Ratregion
5040150RH128118217935125303512747Ratregion
5042570RH1295142039808030808233Ratregion
5043778RH13022219091154669911546889Ratregion
5040454RH12829220691257702912577235Ratregion
5072624RH136957217929076812907895Ratregion
5071972RH13539121791359831013598527Ratregion
5075446RH13859813091359442813594558Ratregion
5075722RH138759230911361261136356Ratregion
5072278RH13675621791406617014066387Ratregion
5076364RH13913212491293788712938011Ratregion
5072558RH136918180915442101544390Ratregion
5072558RH136918180915442101544390Ratregion
5072718RH1370131509846570846720Ratregion
5076626RH13928513291359967613599808Ratregion
5080612RH1416805769902833903409Ratregion
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5075838RH13882621691406055214060768Ratregion
5077456RH139767199946803274680526Ratregion
5077656RH139882217936737963674013Ratregion
5078316RH14027020691339222613392432Ratregion
5079836RH141231219922091872209406Ratregion
5078260RH14023618491413475714134941Ratregion
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5079144RH14076114291363227913632421Ratregion
5072912RH137126203919178381918041Ratregion
5072940RH13714218091154753711547717Ratregion
5079200RH140794198915553931555591Ratregion
5080266RH1414812019900438900639Ratregion
5080270RH141483200912354861235686Ratregion
5071426RH1350751919951032951223Ratregion
5073630RH13754716191348817313488334Ratregion
5070828RH1347292019802971803172Ratregion
5074174RH13786419591363426113634456Ratregion
5071184RH13493618591263561112635796Ratregion
5071192RH1349402209799190799410Ratregion
5073414RH13742218791100293511003122Ratregion
5071960RH13538418191351868113518862Ratregion
5072170RH13669312391258828612588409Ratregion
5071622RH135189187912363181236505Ratregion
5063376BI30178721091236329412363504Ratregion
5066842AU048118196929118272912073Ratregion
5067232AU04788118391411483814115021Ratregion
5067640AU04762312091092899210929112Ratregion
5068548AU04708019491304802313048217Ratregion
5068616AU047037210982408818240924Ratregion
5069246AU04662328991122706611227350Ratregion
5060360AW525135168912069781207146Ratregion
5062684BF40384345391181977811820231Ratregion
5060096BF38848716791365030613650473Ratregion
5060126BF38852617891415288214153060Ratregion
5062148BE10626318091337305613373236Ratregion
5063602BE10782015991339057113390730Ratregion
5061128AW52616516091420489514205055Ratregion
5061484BE11187215591376587613766031Ratregion
5086598AA89179620991330538113305590Ratregion
5082751BF39002024591347642313476668Ratregion
5089123AU048967144965329966533142Ratregion
5089153AU048986107933190933319126Ratregion
5089817AU049381278920872442087522Ratregion
5083205BF39098920691401951614019722Ratregion
5083255BI27583775991325808013258839Ratregion
5088247AU04845419091288859512888787Ratregion
5089297AU04907220791092887610929083Ratregion
5083637BI276528188918305331830721Ratregion
5089659AU04928625591131173811311993Ratregion
5087805D5Wsu145e276987149268715204Ratregion
5085451BM39039516091169231311692473Ratregion
5085483AI17714720691413032114130527Ratregion
5088569AU048648122915900301590152Ratregion
5090429AU049745282982536598253941Ratregion
5088909AU048842138921517322151868Ratregion
5085663BI27677916391367391213674075Ratregion
5081006RH14190915891352484713525005Ratregion
5083511BE10032921191361489613615107Ratregion
5503260UniSTS:2376588391418475414184837Ratregion
5503224UniSTS:237297319926996642699979Ratregion
5503224UniSTS:237297319927610262761341Ratregion
5503224UniSTS:237297319929536022953917Ratregion
5503268UniSTS:237667257913973831397640Ratregion
5503272UniSTS:237662129933977043397833Ratregion
5507819REN5932125391291399012914243Ratregion
5505506D4S33301671990139299015512Ratregion
5505124Khsrp941918634751864416Ratregion
5506491D11S41431536976654537666991Ratregion
5506698REN3602081491148830111489115Ratregion
5507005fj02h10.x1332949715104971842Ratregion
5501936MARC_17747-17748:1031760580:1502921222882122790Ratregion
5500424REN6052925091320278613203036Ratregion
5499697Dazl110691070094810702054Ratregion
5502303RH12435427391339416613394439Ratregion
5500605RH136188207965116546511861Ratregion
5500414REN5958323691297041612970652Ratregion
5500416REN5959524091297311212973352Ratregion
5500418REN5982725291303250213032754Ratregion
5500420REN5999425491307481213075066Ratregion
5500422REN6051524791319949513199742Ratregion
5500450AW184596286975018637502149Ratregion
5500649RH136456190965116546511844Ratregion
5503436stSG63486098491310355213104536Ratregion
5500897D4S157952291096758210968104Ratregion
5505227Safb1304914302831431587Ratregion
5501870MARC_16413-16414:1018631384:10914086921409275Ratregion
5501870MARC_16413-16414:1018631384:10914311961431698Ratregion
5502022MARC_24021-24022:1029778648:1606919185431919149Ratregion
5502106MARC_4447-4448:966894303:1182910019131003230Ratregion
5502371RH124646187917312491731436Ratregion
Position Markers

Peak: (D9Rat44)
Rat AssemblyChrPosition (strand)Source
GRCr895,346,479 - 5,346,648 (+)Marker Load Pipeline
mRatBN7.295,109,826 - 5,109,995 (+)MAPPER
Rnor_6.092,880,977 - 2,881,145NCBI
Rnor_5.092,813,697 - 2,813,865UniSTS
RGSC_v3.492,948,882 - 2,949,051RGD
RGSC_v3.492,948,883 - 2,949,051UniSTS
RGSC_v3.192,948,882 - 2,949,051RGD
Celera91,991,507 - 1,991,679UniSTS
SHRSP x BN Map91.33RGD
SHRSP x BN Map91.33UniSTS
FHH x ACI Map90.08RGD
Cytogenetic Map9 RGD
Flank 2: (D9Rat79)
Rat AssemblyChrPosition (strand)Source
GRCr8921,707,181 - 21,707,400 (+)Marker Load Pipeline
mRatBN7.2914,209,564 - 14,209,783 (+)MAPPER
Rnor_6.0916,519,948 - 16,520,166NCBI
Rnor_5.0915,427,242 - 15,427,460UniSTS
RGSC_v3.499,405,698 - 9,405,916UniSTS
RGSC_v3.499,405,697 - 9,405,916RGD
RGSC_v3.199,403,020 - 9,403,238RGD
Celera911,957,666 - 11,957,884UniSTS
RH 3.4 Map956.3RGD
RH 3.4 Map956.3UniSTS
RH 2.0 Map955.7RGD
FHH x ACI Map96.3799RGD
Cytogenetic Map9q12UniSTS


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
10054141Gmadr4Adrenal mass QTL 42.450.0074adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)9114209783Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
631533Iresp3Immunoglobin response QTL316.2blood immunoglobulin E amount (VT:0002492)serum immunoglobulin E level (CMO:0002101)927457995857951Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)9795472022071169Rat
1578675Bss17Bone structure and strength QTL 173.8femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)9336865213533896Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 6 months old 126 F2 males 10053640
qtl_general software package used: ANOVA, MAPMAKER/EXP 3.0, MAPMAKER/QTL 1.1 10053640
qtl_general measurement method: animals were restraint in a cylindrical wire cage for 30 minutes; after one week they were decapitated and adrenals were weighed 10053640
qtl_general confidence interval: 0-19 Mb 10053640