Gzmc Marker Search Result - Rat Genome Database

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Advanced Search (OLGA)

Marker: Gzmc

Symbol: Gzmc
Previously known as:
RGD ID: 7206134
Expected Size: 693 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81534,437,499 - 34,438,192 (+)Marker Load Pipeline
mRatBN7.21530,321,840 - 30,322,533 (+)MAPPERmRatBN7.2
Rnor_6.01535,392,346 - 35,393,038NCBIRnor6.0
Rnor_6.01536,449,158 - 36,449,850NCBIRnor6.0
Rnor_5.01540,303,169 - 40,303,861UniSTSRnor5.0
Rnor_5.01539,275,434 - 39,276,126UniSTSRnor5.0
Celera1530,043,098 - 30,043,790UniSTS
Cytogenetic Map15p12UniSTS
Is Marker For: Genes:   Gzmc   LOC691695  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer ATGTGTGGGAGACTCAAAGATCAAG
Reverse Primer CCATCAGTTTGCCCGTAGGA
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
620019Gzmcgranzyme C153443731234440006Rat

Nucleotide Sequences
RefSeq Transcripts NM_134332.2 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003751488.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC109734.5 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117338.4 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219852.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219889.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219891.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219947.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219966.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219998.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220005.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220014.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220035.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220062.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220064.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220079.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220128.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220142.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220223.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220228.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220350.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220364.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220396.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220405.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220426.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220453.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220464.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220466.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220480.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220502.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220512.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220562.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220600.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220618.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220648.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220735.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220749.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220751.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220777.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220856.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220878.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220928.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221390.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221473.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221896.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221940.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223110.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223660.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228922.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229160.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229161.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229162.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229181.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229235.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229289.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229298.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229311.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229314.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229395.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229439.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229454.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229468.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229477.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229486.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229502.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229509.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229535.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229636.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229685.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229690.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229764.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229772.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229825.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229868.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229899.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229912.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229913.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229994.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230028.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230087.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230100.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230157.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230165.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH618413.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U57062.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15231575947315759Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15139411584Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15144836456Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)153185580392671517Rat
10755503Bp391Blood pressure QTL 3912.37arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)152272835342072050Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152852773273527732Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1525285835104695021Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)152233635152597086Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)1525285835104695021Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151915576287086765Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)15278592347785923Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151492659471614418Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)152233635167336351Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)1525285835104695021Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 171290 UniSTS
  691695 UniSTS