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Nucleotide Sequences
QTLs in Region (mRatBN7.2)
RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | 61355 | Bp36 | Blood pressure QTL 36 | 2.9 | blood pressure trait (VT:0000183) | systolic blood pressure (CMO:0000004) | 2 | 5873687 | 102844969 | Rat | 731184 | Mamtr4 | Mammary tumor resistance QTL 4 | 0.0003 | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 2 | 16491740 | 61491740 | Rat | 1357990 | Ael1 | Aortic elastin QTL 1 | 3.1 | 0.00091 | aorta elastin amount (VT:0003905) | aortic elastin | 2 | 19076825 | 64076825 | Rat | 731167 | Glom4 | Glomerulus QTL 4 | 2.4 | 0.0082 | kidney glomerulus morphology trait (VT:0005325) | count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002) | 2 | 20304672 | 65304672 | Rat | 2300168 | Bmd47 | Bone mineral density QTL 47 | 6.6 | 0.0001 | femur mineral mass (VT:0010011) | bone mineral density (CMO:0001226) | 2 | 20662448 | 65662448 | Rat | 10402051 | Gdil2 | Gastrointestinal dilation QTL 2 | enteric ganglion morphology trait (VT:0001045) | length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836) | 2 | 24903853 | 74786777 | Rat | 1302794 | Stl27 | Serum triglyceride level QTL 27 | 4.4 | 0.0001 | blood triglyceride amount (VT:0002644) | plasma triglyceride level (CMO:0000548) | 2 | 25413423 | 143657569 | Rat | 1358894 | Kidm24 | Kidney mass QTL 24 | 4.03 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 2 | 25413423 | 157142209 | Rat | 1358899 | Kidm23 | Kidney mass QTL 23 | 3.88 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 2 | 25413423 | 157142209 | Rat | 1358901 | Cm38 | Cardiac mass QTL 38 | 2 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 2 | 25413423 | 157142209 | Rat | 1358904 | Cm39 | Cardiac mass QTL 39 | 2.26 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 2 | 25413423 | 157142209 | Rat | 1358910 | Kidm27 | Kidney mass QTL 27 | 5.77 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 2 | 25413423 | 157142209 | Rat | 1358911 | Kidm28 | Kidney mass QTL 28 | 5.42 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 2 | 25413423 | 157142209 | Rat | 1358913 | Cm41 | Cardiac mass QTL 41 | 2.73 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 2 | 25413423 | 203928301 | Rat | 1358917 | Cm42 | Cardiac mass QTL 42 | 2.82 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 2 | 25413423 | 203928301 | Rat | 1358887 | Bw50 | Body weight QTL 50 | 2.39 | body mass (VT:0001259) | body weight (CMO:0000012) | 2 | 25413652 | 157142078 | Rat | 1358908 | Bw49 | Body weight QTL 49 | 3.36 | body mass (VT:0001259) | body weight (CMO:0000012) | 2 | 25413652 | 157142078 | Rat | 1354617 | Bp240 | Blood pressure QTL 240 | 4 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 26917817 | 81754745 | Rat | 1354617 | Bp240 | Blood pressure QTL 240 | 4 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 2 | 26917817 | 81754745 | Rat | 1354617 | Bp240 | Blood pressure QTL 240 | 4 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 2 | 26917817 | 81754745 | Rat | 1354603 | Bp243 | Blood pressure QTL 243 | 3.9 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 2 | 26917817 | 127469484 | Rat | 2290453 | Scl55 | Serum cholesterol level QTL 55 | 2.83 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 2 | 26917817 | 136917119 | Rat | 9590095 | Sffal3 | Serum free fatty acids level QTL 3 | 6.78 | 0.001 | blood free fatty acid amount (VT:0001553) | plasma free fatty acids level (CMO:0000546) | 2 | 27157160 | 72157160 | Rat | 10755434 | Coatc7 | Coat color QTL 7 | 0.04794 | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 2 | 30648065 | 75648065 | Rat | 10755436 | Coatc8 | Coat color QTL 8 | 0.02431 | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 2 | 35023117 | 80023117 | Rat | 61371 | Edpm1 | Estrogen-dependent pituitary mass QTL 1 | 4 | 0.05 | pituitary gland mass (VT:0010496) | pituitary gland wet weight (CMO:0000853) | 2 | 35134841 | 88029593 | Rat | 70174 | BpQTLCluster2 | Blood pressure QTL cluster 2 | 4.24 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 2 | 40067944 | 102785628 | Rat | 70174 | BpQTLCluster2 | Blood pressure QTL cluster 2 | 4.24 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 40067944 | 102785628 | Rat | 70174 | BpQTLCluster2 | Blood pressure QTL cluster 2 | 4.24 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 2 | 40067944 | 102785628 | Rat | 70174 | BpQTLCluster2 | Blood pressure QTL cluster 2 | 4.24 | arterial blood pressure trait (VT:2000000) | pulse pressure (CMO:0000292) | 2 | 40067944 | 102785628 | Rat | 70174 | BpQTLCluster2 | Blood pressure QTL cluster 2 | 4.24 | arterial blood pressure trait (VT:2000000) | absolute change in mean arterial blood pressure (CMO:0000533) | 2 | 40067944 | 102785628 | Rat | 1300155 | Bp174 | Blood pressure QTL 174 | 4.09 | arterial blood pressure trait (VT:2000000) | absolute change in mean arterial blood pressure (CMO:0000533) | 2 | 42804607 | 60653831 | Rat | 2293835 | Kiddil5 | Kidney dilation QTL 5 | 3.8 | kidney pelvis morphology trait (VT:0004194) | hydronephrosis severity score (CMO:0001208) | 2 | 42804607 | 157142209 | Rat | 2293843 | Kiddil6 | Kidney dilation QTL 6 | 3.1 | kidney pelvis morphology trait (VT:0004194) | hydronephrosis severity score (CMO:0001208) | 2 | 42804607 | 182042367 | Rat | 1298074 | Bp164 | Blood pressure QTL 164 | 0.003 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 42804607 | 202447032 | Rat | 1298085 | Bp165 | Blood pressure QTL 165 | 0.0006 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 42804607 | 202447032 | Rat | 61467 | Bp14 | Blood pressure QTL 14 | 2.2 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 2 | 43154682 | 202446871 | Rat | 61467 | Bp14 | Blood pressure QTL 14 | 2.2 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 43154682 | 202446871 | Rat | 2293676 | Bmd19 | Bone mineral density QTL 19 | 10.7 | 0.0001 | femur mineral mass (VT:0010011) | total volumetric bone mineral density (CMO:0001728) | 2 | 43162366 | 111362592 | Rat | 2293682 | Bmd24 | Bone mineral density QTL 24 | 8.9 | 0.0001 | femur mineral mass (VT:0010011) | compact volumetric bone mineral density (CMO:0001730) | 2 | 43162366 | 111362592 | Rat | 2293671 | Bss44 | Bone structure and strength QTL 44 | 10.97 | 0.0001 | lumbar vertebra morphology trait (VT:0010494) | lumbar vertebra cortical cross-sectional area (CMO:0001690) | 2 | 43162366 | 148478373 | Rat | 631208 | Bw1 | Body weight QTL1 | 5.09 | mesenteric fat pad mass (VT:0010427) | mesenteric fat pad weight to body weight ratio (CMO:0000654) | 2 | 43171017 | 83575226 | Rat | 1354601 | Slep1 | Serum leptin concentration QTL 1 | 5.39 | blood leptin amount (VT:0005667) | serum leptin level (CMO:0000780) | 2 | 43171017 | 184114403 | Rat | 631266 | Bp132 | Blood pressure QTL 132 | 0.0005 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 46123260 | 202447032 | Rat | 1354592 | Rf50 | Renal function QTL 50 | 3.5 | urine output (VT:0003620) | timed urine volume (CMO:0000260) | 2 | 53822747 | 74786777 | Rat | 1331760 | Bp206 | Blood pressure QTL 206 | 3.62454 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 2 | 56043031 | 202447032 | Rat | 6480225 | Gdil1 | Gastrointestinal dilation QTL 1 | enteric ganglion morphology trait (VT:0001045) | length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836) | 2 | 56660879 | 74786777 | Rat | 1582246 | Cm60 | Cardiac mass QTL 60 | 5.8 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 2 | 57605612 | 76539510 | Rat | 1558648 | Smcn1 | Smooth muscle cell number QTL 1 | 0.039 | blood vessel smooth muscle cell quantity (VT:0010525) | aorta smooth muscle cell count per unit vessel length (CMO:0001646) | 2 | 59134147 | 127460910 | Rat | 5684990 | Bmd82 | Bone mineral density QTL 82 | 2.8 | tibia mineral mass (VT:1000283) | bone mineral content (CMO:0001554) | 2 | 59324377 | 103795077 | Rat | 5684996 | Bmd85 | Bone mineral density QTL 85 | 4.7 | 0.024 | tibia mineral mass (VT:1000283) | bone mineral density (CMO:0001226) | 2 | 59324377 | 103795077 | Rat | 61438 | Cia7 | Collagen induced arthritis QTL 7 | 4.6 | 0.0001 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 2 | 59324377 | 141596857 | Rat | 631500 | Bp99 | Blood pressure QTL 99 | 2.5 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 59324719 | 102755241 | Rat | 2298549 | Neuinf12 | Neuroinflammation QTL 12 | 3.5 | nervous system integrity trait (VT:0010566) | spinal cord beta-2 microglobulin mRNA level (CMO:0002125) | 15 | 1 | 55302115 | Rat | 1582251 | Gluco24 | Glucose level QTL 24 | 3.2 | 0.0008 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 15 | 5530756 | 50530756 | Rat | 631273 | Lecl2 | Lens clarity QTL 2 | 0.001 | lens clarity trait (VT:0001304) | age of onset/diagnosis of cataract (CMO:0001584) | 15 | 10596089 | 55596089 | Rat | 2300167 | Bmd63 | Bone mineral density QTL 63 | 5.9 | 0.0001 | femur mineral mass (VT:0010011) | volumetric bone mineral density (CMO:0001553) | 15 | 11111142 | 56111142 | Rat | 2300173 | Bmd62 | Bone mineral density QTL 62 | 12.8 | 0.0001 | lumbar vertebra mineral mass (VT:0010511) | volumetric bone mineral density (CMO:0001553) | 15 | 11111142 | 56111142 | Rat | 2293688 | Bss29 | Bone structure and strength QTL 29 | 5.31 | 0.0001 | femur morphology trait (VT:0000559) | femur midshaft cortical cross-sectional area (CMO:0001663) | 15 | 11111142 | 56111142 | Rat | 2317750 | Glom26 | Glomerulus QTL 26 | 4.3 | urine protein amount (VT:0005160) | urine protein level (CMO:0000591) | 15 | 12496141 | 65205939 | Rat | 61424 | Scl1 | Serum cholesterol level QTL 1 | 7.7 | 0.001 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 15 | 16725528 | 80672115 | Rat | 1331729 | Rf42 | Renal function QTL 42 | 3.071 | kidney blood vessel physiology trait (VT:0100012) | absolute change in renal blood flow rate (CMO:0001168) | 15 | 17362897 | 73690657 | Rat | 10054130 | Srcrt8 | Stress Responsive Cort QTL 8 | 2.18 | 0.0085 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 15 | 22117933 | 67117933 | Rat | 1578646 | Bmd18 | Bone mineral density QTL 18 | 5.2 | femur mineral mass (VT:0010011) | trabecular volumetric bone mineral density (CMO:0001729) | 15 | 22806240 | 98288169 | Rat | 1578647 | Bmd17 | Bone mineral density QTL 17 | 4 | femur mineral mass (VT:0010011) | total volumetric bone mineral density (CMO:0001728) | 15 | 22806240 | 98288169 | Rat | 1578660 | Bss19 | Bone structure and strength QTL 19 | 4.3 | femur morphology trait (VT:0000559) | bone trabecular cross-sectional area (CMO:0002311) | 15 | 22806240 | 98288169 | Rat | 1582214 | Stl21 | Serum triglyceride level QTL 21 | 3.1 | 0.022 | blood triglyceride amount (VT:0002644) | serum triglyceride level (CMO:0000360) | 15 | 28030665 | 82262678 | Rat | 1582227 | Gluco30 | Glucose level QTL 30 | 3.6 | 0.0003 | blood glucose amount (VT:0000188) | absolute change in blood glucose level area under curve (CMO:0002034) | 15 | 28030665 | 82262678 | Rat | 1582228 | Epfw3 | Epididymal fat weight QTL 3 | 4.1 | 0.0002 | epididymal fat pad mass (VT:0010421) | epididymal fat pad weight to body weight ratio (CMO:0000658) | 15 | 28030665 | 82262678 | Rat | 1582242 | Gluco28 | Glucose level QTL 28 | 3.3 | 0.0008 | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 15 | 28030665 | 82262678 | Rat | 1582244 | Bw79 | Body weight QTL 79 | 4 | 0.0002 | epididymal fat pad mass (VT:0010421) | epididymal fat pad weight to body weight ratio (CMO:0000658) | 15 | 28030665 | 82262678 | Rat | 2293691 | Bmd37 | Bone mineral density QTL 37 | 6.6 | 0.0001 | femur strength trait (VT:0010010) | femur total energy absorbed before break (CMO:0001677) | 15 | 33611058 | 71477291 | Rat | 2293686 | Bmd36 | Bone mineral density QTL 36 | 7.4 | 0.0001 | femur strength trait (VT:0010010) | femoral neck ultimate force (CMO:0001703) | 15 | 33611058 | 71477291 | Rat | 1598828 | Glom14 | Glomerulus QTL 14 | 2.5 | kidney glomerulus morphology trait (VT:0005325) | index of glomerular damage (CMO:0001135) | 15 | 34054139 | 79054139 | Rat | 7411725 | Strs7 | Sensitivity to stroke QTL 7 | 3.8 | cerebrum integrity trait (VT:0010549) | percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932) | 15 | 40289901 | 49308583 | Rat | 1300144 | Rf23 | Renal function QTL 23 | 3.61 | renal blood flow trait (VT:2000006) | absolute change in renal vascular resistance (CMO:0001900) | 15 | 40631268 | 98288169 | Rat | |
Additional Information
External Database Links
Database | Acc Id | Source(s) |
NCBI Gene | 287962 | UniSTS |
306027 | UniSTS | |
684557 | UniSTS | |
UniSTS | 265728 | UniSTS |