RH65516 Marker Search Result - Rat Genome Database

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Marker: RH65516

Symbol: RH65516
Previously known as:
RGD ID: 5027717
Expected Size: 175 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21828,845,204 - 28,845,379 (+)MAPPERmRatBN7.2
Rnor_6.01830,214,891 - 30,215,065NCBIRnor6.0
Rnor_5.01829,923,438 - 29,923,612UniSTSRnor5.0
RGSC_v3.41829,927,025 - 29,927,199UniSTSRGSC3.4
Celera1828,551,749 - 28,551,923UniSTS
Cytogenetic Map18p11UniSTS
Is Marker For: Genes:   Pcdha3   Pcdha4   Pcdha8   Pcdha10   Pcdha12   Pcdha13   Pcdha1   Pcdha7   Pcdhac1   Pcdha9   Pcdha6   Pcdha2   Pcdha5   Pcdhac2   Pcdha11  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TCCACTTTTTCACAGGTGTACA
Reverse Primer CCTGAAATCAATCTCCCATATG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_053933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_201422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB113384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB113399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY573985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH619204.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 116741 UniSTS
  116742 UniSTS
  116778 UniSTS
  116779 UniSTS
  116780 UniSTS
  116781 UniSTS
  393085 UniSTS
  393086 UniSTS
  393087 UniSTS
  393088 UniSTS
  393089 UniSTS
  393090 UniSTS
  393091 UniSTS
  393092 UniSTS
  394223 UniSTS