D8Got3 Marker Search Result - Rat Genome Database

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Marker: D8Got3

Symbol: D8Got3
Previously known as: OT50.40; oxsts2602; 
RGD ID: 44364
Expected Size: 258 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.281,798,512 - 1,798,770 (+)MAPPERmRatBN7.2
Rnor_6.081,813,140 - 1,813,397NCBIRnor6.0
Rnor_5.081,834,282 - 1,834,539UniSTSRnor5.0
RGSC_v3.481,194,468 - 1,194,725RGDRGSC3.4
RGSC_v3.481,194,469 - 1,194,726UniSTSRGSC3.4
RGSC_v3.181,194,468 - 1,194,725RGD
Celera81,680,170 - 1,680,427UniSTS
RH 2.0 Map80.0RGD
Cytogenetic Map8q11UniSTS
Is Marker For: Genes:   Gria4  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. UniSTS Pipeline RGD automated pipelines
3. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
4. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8

Strains and Sequence

Sequence
 
Forward Primer CGATCCAGTTTCCCTCAAGT
Reverse Primer TCTCATAGCTCAGAAAATGAAGTGA
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
61863Gria4glutamate ionotropic receptor AMPA type subunit 4815621182035035Rat

Nucleotide Sequences
GenBank Nucleotide AU024893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
71120Niddm21Non-insulin dependent diabetes mellitus QTL 213.73blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)813402289Rat
9590084Insglur5Insulin/glucose ratio QTL 518.540.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)8124597739Rat
2317882Alcrsp24Alcohol response QTL 243.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)8125902202Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 29629 UniSTS
UniSTS 115799 UniSTS