D15Rat150 Marker Search Result - Rat Genome Database

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Marker: D15Rat150

Symbol: D15Rat150
Previously known as: oxsts9656; R0332-D07; 
RGD ID: 43054
Expected Size: 211 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81568,990,914 - 68,991,125 (+)Marker Load Pipeline
Celera1562,096,879 - 62,097,089UniSTS
RH 3.4 Map15388.63UniSTS
RH 3.4 Map15388.63RGD
SHRSP x BN Map1539.1899RGD
SHRSP x BN Map1539.1899UniSTS
Cytogenetic Map15q12UniSTS
Is Marker For: Genes:   Diaph3  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
5. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CAAGGAAGAAAGCATGTGTATTTG
Reverse Primer CAAATTCTCTGGTAGGCCCA
 
Template 
ATGNTNCAGGTCAGCTCTAGAGGATCCCCACAAGGAAGAAAGCATGTGTATTTGAATATGAGGA
ATTTGAAGAATACGCACACAAACACACACACACACACACACACACACACACACACACACACACA
CACAAACTGAGTTTCTTAGATTTTGACCTTGAAGTCAGAATCTCAAGGTTGAAAGACATAGAAA
GTGATGAGGCCCTTCAGAAGTAGCCACACTTGGGCCTACCAGAGAATTTGTGTTTGGATCATCA
TGAATATCATAGGAGGCAAATGAGTGCACAGGGNTACTCTAGAGCTGTCCAAGGTGGGTACCGA
GGCTCGAATTCGTAATCATGGTTCATAGNCTGTTTCCTGTGTGAAATTGTTATCCGNTCACAAT
TCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAA
CTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGC
ATTAATGAATCGGCCAACGCGCGGGGAGAGGCGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCT
TTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGNTGGCCCTGAGAGAGTTGCAGCA
AGCGGTCCACGCTGGTTTGCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCCGAAATCGGCN
NATCCTTATAATCAAAGAATAGCCGAGATAGGGTTGAGTNTGTNCAGTTTGGAACAAGNTCCCT
TNANGAACGTGGATCACGTCAAGGGGAAAANGTCTTCAGGCGTGCACTAGGNCTCANCNATAAG
TNTTGNGTGGGGCGTAAGNTAATNGNNCT

Region

Nucleotide Sequences
GenBank Nucleotide CH473951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 290396 UniSTS