D15Rat103 Marker Search Result - Rat Genome Database

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Marker: D15Rat103

Symbol: D15Rat103
Previously known as: oxsts9609; R0223-A10; 
RGD ID: 40064
Expected Size: 121 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81598,885,918 - 98,886,039 (+)Marker Load Pipeline
RGSC_v3.415100,174,510 - 100,174,630UniSTSRGSC3.4
RGSC_v3.415100,174,509 - 100,174,630RGDRGSC3.4
Celera1591,343,541 - 91,343,661UniSTS
RGSC_v3.115100,190,289 - 100,190,410RGD
SHRSP x BN Map1558.5898RGD
SHRSP x BN Map1558.5898UniSTS
Cytogenetic Map15q24UniSTS
Is Marker For: Strains:   ACI/N   AVN/Orl   BBDR/Rhw   BBDP/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN-Lx/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   COP/OlaHsd   DA/PitN   FHH/Eur   F344/Pit   GH/Omr   GK/KyoSwe   DON/Melb   M520/N   IS/Kyo   WN/N   LH/Mav   LE/Mol   LEW/Pit   LOU/CHan   LN/Mav   MHS/Gib   MNR/N   MNRA/N   MNS/Gib   MR/Pit   NEDH/K   NP9   ODU/N   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SR/Jr   SHRSP/Riv   SS/Jr   WAG/RijKyo   WF/Pit   WIST/Nhg   WKY/OlaHsd   WTC/Kyo  
Genes:   Gpc5  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGAGGGATTGAGGACACCAG
Reverse Primer TCAGTCCCATTCAGGGTCTC
 
Template 
CCCAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTCAGAGGATCCCCCTNNACAACAATGTAT
GCAAAGGACCTAGGTCAGTCCCATTCAGGGTCTCTGTGAACCCCTCATGAGCCCAGGTTAGTTG
AATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCTGGTGTC
CTCAATCCCTCTAACTCCCACAATCCTTCCTCTTCTGTCTTCTGTAGGAGTCTCTGATCTCTCC
CTAATGTTTGACTCTGGGTTTCTGCATCAGGGGTACCGAGCTCGAATTCGTAATCATGGTCATA
GCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATA
AAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGC
CCGCTTTCCAGTCGGGAAACTGTCGTGCCAGCTGCATTAATGAATCGGCAAGCGCGGGGAGAG

Region

Nucleotide Sequences
GenBank Nucleotide CH473951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 306157 UniSTS