D2Rat127 Marker Search Result - Rat Genome Database

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Marker: D2Rat127

Symbol: D2Rat127
Previously known as: R0064-C06; oxsts6809; 
RGD ID: 37940
Expected Size: 142 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.02204,650,681 - 204,650,836NCBIRnor5.0
RGSC_v3.42177,914,620 - 177,914,774RGDRGSC3.4
RGSC_v3.12177,864,593 - 177,864,883RGD
SHRSP x BN Map270.0198RGD
SHRSP x BN Map270.0198UniSTS
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd   SS.SHR-(D2Rat127- D2Rat230)/Mco  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CACAGTGTGGTACCTCCACG
Reverse Primer CATGTCAATTTTTCAAATTGGATT
 
Template 
ANNAGAGGAGATATACCAGAAGAGGGCATCAGATCTCTTTACAGATGGTTGTGAGCCACCATGT
GGTTGNTGGGAATTGAACTCATGACCTNCTGGAAGAACAATTCAGTGACTCTTAACCACTGAGA
CCATNCTNCTTCCAGTCCCAACATGTCAATTTTTCAAATTGGATTTTTTTTTTATTTTCTAGGT
TAAANTTTTCATAGATANTTNCTATTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACA
CATGAATATATAATCCGTGGAGGTACCACACTGTGAGTACCNCTCATACNGCNCTTACTTTGAG
GGTACGAGCCGAATTCGTAATCATGGTCATAGTGTTTCCGTGTGAAATTGTTATCCGCNCACAA
TTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCGGGGNGNNAATG

Region

Nucleotide Sequences


Additional Information