D16Rat8 Marker Search Result - Rat Genome Database

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Marker: D16Rat8

Symbol: D16Rat8
Previously known as: oxsts6342; R002-C08; R0002-C08; 
RGD ID: 34797
Expected Size: 156 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21620,817,984 - 20,818,140 (+)MAPPERmRatBN7.2
Rnor_6.01622,525,617 - 22,525,772NCBIRnor6.0
Rnor_5.01622,420,014 - 22,420,169UniSTSRnor5.0
RGSC_v3.41622,521,034 - 22,521,190RGDRGSC3.4
RGSC_v3.41622,521,035 - 22,521,190UniSTSRGSC3.4
Celera1620,976,494 - 20,976,653UniSTS
RGSC_v3.11622,521,033 - 22,521,188RGD
RH 3.4 Map16253.92RGD
RH 3.4 Map16253.92UniSTS
RH 2.0 Map16278.9RGD
SHRSP x BN Map167.92RGD
FHH x ACI Map1612.1799RGD
Is Marker For: Strains:   ACI/N   AVN/Orl   BBDR/Rhw   BBDP/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN-Lx/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   COP/OlaHsd   DA/PitN   FHH/Eur   F344/Pit   GH/Omr   GK/KyoSwe   DON/Melb   M520/N   IS/Kyo   WN/N   LH/Mav   LE/Mol   LEW/Pit   LOU/CHan   LN/Mav   MHS/Gib   MNR/N   MNRA/N   MNS/Gib   MR/Pit   NEDH/K   NP9   ODU/N   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SR/Jr   SHRSP/Riv   SS/Jr   WAG/RijKyo   WF/Pit   WIST/Nhg   WKY/OlaHsd   WTC/Kyo  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. UniSTS Pipeline RGD automated pipelines
5. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
6. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8

Strains and Sequence

Sequence
 
Forward Primer AAGAGGCTCATTCTTCTTAAGCA
Reverse Primer TCAACTGCACGGACTGAGAC
 

Region

Nucleotide Sequences
GenBank Nucleotide JH618638.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information