Gene: Ervv-2 (endogenous retrovirus group V member 2, envelope) Rattus norvegicus
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Symbol:
Ervv-2
Name:
endogenous retrovirus group V member 2, envelope
RGD ID:
9302596
Description:
Orthologous to human ERVV-2 (endogenous retrovirus group V member 2, envelope); INTERACTS WITH amphetamine; paracetamol; 2-hydroxypropanoic acid (ortholog).
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
endogenous retroviral sequence 3; Erv3; LOC103691893; putative endogenous retrovirus group FC1 Env polyprotein; putative ERV-F(c)1 provirus ancestral Env polyprotein
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 139,582,024 - 139,587,909 (-) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 3 139,582,024 - 139,587,909 (-) Ensembl GRCr8 mRatBN7.2 3 119,129,119 - 119,135,004 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 119,131,071 - 119,131,670 (-) Ensembl mRatBN7.2 Rnor_6.0 3 124,458,781 - 124,478,514 (-) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 124,460,730 - 124,461,332 (-) Ensembl rn6 Rnor6.0 Celera 3 117,929,144 - 117,948,757 (-) NCBI Celera Cytogenetic Map 3 q36 NCBI
JBrowse:
References
Additional References at PubMed
Genomics
Comparative Map Data
Ervv-2 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 139,582,024 - 139,587,909 (-) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 3 139,582,024 - 139,587,909 (-) Ensembl GRCr8 mRatBN7.2 3 119,129,119 - 119,135,004 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 119,131,071 - 119,131,670 (-) Ensembl mRatBN7.2 Rnor_6.0 3 124,458,781 - 124,478,514 (-) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 124,460,730 - 124,461,332 (-) Ensembl rn6 Rnor6.0 Celera 3 117,929,144 - 117,948,757 (-) NCBI Celera Cytogenetic Map 3 q36 NCBI
ERVV-2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 19 53,044,740 - 53,051,680 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 19 53,044,740 - 53,051,680 (+) Ensembl hg38 GRCh38 GRCh37 19 53,547,993 - 53,554,933 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Celera 19 50,595,549 - 50,601,940 (+) NCBI Celera Cytogenetic Map 19 q13.41 NCBI HuRef 19 49,872,949 - 49,879,339 (+) NCBI HuRef CHM1_1 19 53,549,788 - 53,556,176 (+) NCBI CHM1_1 T2T-CHM13v2.0 19 56,127,328 - 56,134,257 (+) NCBI T2T-CHM13v2.0
Gm27179 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 14 69,745,042 - 69,753,064 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 14 69,746,081 - 69,749,998 (-) Ensembl GRCm39 Ensembl GRCm39 Cytogenetic Map 14 D2 NCBI
ERVV-2 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 20 59,073,701 - 59,081,385 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 19 60,992,153 - 60,999,840 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 19 49,967,361 - 49,974,586 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 19 58,845,559 - 58,846,860 (+) NCBI PanPan1.1 PanPan1.1 panPan2
LOC102164731
ERVV-2 No map positions available.
miRNA Target Status (No longer updated)
Predicted Target Of
Count of predictions: 513 Count of miRNA genes: 235 Interacting mature miRNAs: 281 Transcripts: ENSRNOT00000073088 Prediction methods: Microtar, Miranda, Targetscan Result types: miRGate_prediction 
