Slc37a3 (solute carrier family 37 member 3) - Rat Genome Database

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Gene: Slc37a3 (solute carrier family 37 member 3) Chinchilla lanigera
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Symbol: Slc37a3
Name: solute carrier family 37 member 3
RGD ID: 8981117
Description: ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); xenobiotic transmembrane transport (ortholog); ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); RASopathy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: solute carrier family 37, member 3; sugar phosphate exchanger 3
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554942,858,727 - 2,934,014 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554942,891,415 - 2,933,067 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Slc37a3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554942,858,727 - 2,934,014 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554942,891,415 - 2,933,067 (+)NCBIChiLan1.0ChiLan1.0
SLC37A3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387140,333,752 - 140,398,530 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7140,293,693 - 140,404,433 (-)EnsemblGRCh38hg38GRCh38
GRCh377140,033,552 - 140,098,330 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367139,680,021 - 139,744,780 (-)NCBINCBI36Build 36hg18NCBI36
Celera7134,755,301 - 134,820,377 (-)NCBICelera
Cytogenetic Map7q34NCBI
HuRef7134,326,585 - 134,391,017 (-)NCBIHuRef
CHM1_17139,968,423 - 140,033,217 (-)NCBICHM1_1
T2T-CHM13v2.07141,647,320 - 141,712,712 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27139,362,371 - 139,427,142 (-)NCBI
Slc37a3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39639,311,704 - 39,354,659 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl639,311,707 - 39,354,609 (-)EnsemblGRCm39 Ensembl
GRCm38639,334,770 - 39,377,725 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl639,334,773 - 39,377,675 (-)EnsemblGRCm38mm10GRCm38
MGSCv37639,284,769 - 39,327,706 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36639,265,592 - 39,307,251 (-)NCBIMGSCv36mm8
Celera639,320,062 - 39,362,925 (-)NCBICelera
Cytogenetic Map6B1NCBI
cM Map618.11NCBI
Slc37a3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8469,076,124 - 69,120,392 (-)NCBIGRCr8
mRatBN7.2468,109,314 - 68,153,590 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl468,081,939 - 68,153,568 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx473,031,070 - 73,076,773 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0468,952,204 - 68,997,906 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0467,360,319 - 67,403,020 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0467,118,918 - 67,162,821 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl467,118,910 - 67,162,808 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0466,925,988 - 66,969,270 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4466,840,635 - 66,885,849 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1467,118,168 - 67,161,943 (-)NCBI
Celera463,115,904 - 63,159,080 (-)NCBICelera
Cytogenetic Map4q23NCBI
SLC37A3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26177,088,724 - 177,193,930 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1729,102,005 - 29,204,198 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07132,236,350 - 132,338,150 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17144,717,312 - 144,815,870 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7144,755,561 - 144,815,491 (-)Ensemblpanpan1.1panPan2
SLC37A3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1168,574,973 - 8,615,961 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl168,575,001 - 8,615,971 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha169,410,259 - 9,461,381 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0168,487,307 - 8,538,224 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl168,487,345 - 8,538,222 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1168,438,243 - 8,489,129 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0168,282,606 - 8,333,507 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0168,351,023 - 8,402,007 (+)NCBIUU_Cfam_GSD_1.0
Slc37a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511814,718,157 - 14,765,937 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365924,453,811 - 4,489,343 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC37A3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl189,383,792 - 9,452,570 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1189,383,770 - 9,442,787 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21810,004,028 - 10,019,295 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.2189,890,416 - 9,892,652 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC37A3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121109,101,841 - 109,179,864 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21109,115,256 - 109,164,022 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660725,764,589 - 5,826,474 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc37a3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476520,534,721 - 20,588,599 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476520,537,294 - 20,588,609 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000002720   ⟹   ENSCLAP00000002665
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554942,858,727 - 2,934,014 (+)Ensembl
RefSeq Acc Id: XM_005405423   ⟹   XP_005405480
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554942,893,683 - 2,933,067 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013504991   ⟹   XP_013360445
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554942,891,415 - 2,933,067 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013504992   ⟹   XP_013360446
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554942,893,683 - 2,924,987 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005405480 (Get FASTA)   NCBI Sequence Viewer  
  XP_013360445 (Get FASTA)   NCBI Sequence Viewer  
  XP_013360446 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000002665
  ENSCLAP00000002665.1
RefSeq Acc Id: XP_005405480   ⟸   XM_005405423
- Peptide Label: isoform X1
- UniProtKB: A0A8C2UMB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013360445   ⟸   XM_013504991
- Peptide Label: isoform X2
- UniProtKB: A0A8C2UMB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013360446   ⟸   XM_013504992
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSCLAP00000002665   ⟸   ENSCLAT00000002720

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000001923 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000002720 ENTREZGENE
  ENSCLAT00000002720.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.20 UniProtKB/TrEMBL
InterPro MFS UniProtKB/TrEMBL
  MFS_dom UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/TrEMBL
  Sugar_P_transporter UniProtKB/TrEMBL
NCBI Gene Slc37a3 ENTREZGENE
PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B UniProtKB/TrEMBL
  SUGAR PHOSPHATE EXCHANGER 3 UniProtKB/TrEMBL
Pfam MFS_1 UniProtKB/TrEMBL
PIRSF Hexose_phosphate_transp UniProtKB/TrEMBL
PROSITE MFS UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/TrEMBL
UniProt A0A8C2UMB4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Slc37a3  solute carrier family 37 member 3    solute carrier family 37, member 3  Symbol and/or name change 5135510 APPROVED