Noa1 (nitric oxide associated 1) - Rat Genome Database

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Gene: Noa1 (nitric oxide associated 1) Chinchilla lanigera
Analyze
Symbol: Noa1
Name: nitric oxide associated 1
RGD ID: 8926063
Description: ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN mitochondrial ribosome assembly (ortholog); mitochondrion organization (ortholog); FOUND IN matrix side of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: nitric oxide-associated protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544714,151,241 - 14,164,856 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544714,151,193 - 14,164,969 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Noa1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544714,151,241 - 14,164,856 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544714,151,193 - 14,164,969 (+)NCBIChiLan1.0ChiLan1.0
NOA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38456,963,350 - 56,977,606 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl456,963,350 - 56,977,606 (-)EnsemblGRCh38hg38GRCh38
GRCh37457,829,516 - 57,843,772 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36457,524,273 - 57,538,583 (-)NCBINCBI36Build 36hg18NCBI36
Build 34457,670,444 - 57,684,754NCBI
Celera455,335,470 - 55,349,777 (-)NCBICelera
Cytogenetic Map4q12NCBI
HuRef453,782,949 - 53,797,258 (-)NCBIHuRef
CHM1_1457,864,912 - 57,879,218 (-)NCBICHM1_1
T2T-CHM13v2.0460,454,802 - 60,469,054 (-)NCBIT2T-CHM13v2.0
Noa1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39577,442,016 - 77,458,276 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl577,442,029 - 77,457,931 (-)EnsemblGRCm39 Ensembl
GRCm38577,294,169 - 77,310,413 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl577,294,182 - 77,310,084 (-)EnsemblGRCm38mm10GRCm38
MGSCv37577,723,194 - 77,739,111 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36578,369,026 - 78,384,833 (-)NCBIMGSCv36mm8
Celera574,561,388 - 74,577,311 (-)NCBICelera
Cytogenetic Map5C3.3NCBI
cM Map541.64NCBI
Noa1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81431,189,570 - 31,205,600 (+)NCBIGRCr8
mRatBN7.21430,835,264 - 30,851,294 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1430,835,247 - 30,851,293 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1431,216,115 - 31,232,159 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01432,524,442 - 32,540,486 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01431,009,098 - 31,025,142 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01433,107,868 - 33,124,172 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1433,108,024 - 33,124,171 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01432,901,338 - 32,918,110 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41433,107,963 - 33,123,993 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11433,107,962 - 33,123,992 (+)NCBI
Celera1430,154,477 - 30,170,507 (+)NCBICelera
Cytogenetic Map14p11NCBI
NOA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2372,797,710 - 72,815,870 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1473,003,153 - 73,021,301 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0466,940,529 - 66,954,998 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1473,515,058 - 73,528,368 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl473,515,058 - 73,528,368 (+)Ensemblpanpan1.1panPan2
NOA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11349,078,509 - 49,091,427 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1349,078,361 - 49,090,864 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1348,969,253 - 48,982,132 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01349,693,111 - 49,705,991 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1349,691,850 - 49,705,468 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11349,365,665 - 49,378,746 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01348,894,917 - 48,908,014 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01349,839,955 - 49,852,844 (-)NCBIUU_Cfam_GSD_1.0
Noa1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528527,225,204 - 27,240,382 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648219,055,213 - 19,073,258 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648219,057,360 - 19,073,031 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100621115
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl856,221,663 - 56,231,920 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1856,221,642 - 56,232,182 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2858,999,457 - 59,009,959 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103247084
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_023666128175,429 - 196,777 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Noa1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476112,430,935 - 12,446,408 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476112,430,403 - 12,445,931 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000011852   ⟹   ENSCLAP00000011714
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544714,151,241 - 14,164,856 (+)Ensembl
RefSeq Acc Id: XM_013518519   ⟹   XP_013373973
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544714,151,193 - 14,164,969 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013373973 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000011714
  ENSCLAP00000011714.1
RefSeq Acc Id: XP_013373973   ⟸   XM_013518519
- UniProtKB: A0A8C2V8Q9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000011714   ⟸   ENSCLAT00000011852
Protein Domains
CP-type G


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008077 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000011852 ENTREZGENE
  ENSCLAT00000011852.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro G_CP_dom UniProtKB/TrEMBL
  GTP-bd UniProtKB/TrEMBL
  Mito_transl_resp_regulator UniProtKB/TrEMBL
  NOA1/YqeH-like_C UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene Noa1 ENTREZGENE
PANTHER NITRIC OXIDE-ASSOCIATED PROTEIN 1 UniProtKB/TrEMBL
  NITRIC OXIDE-ASSOCIATED PROTEIN 1 UniProtKB/TrEMBL
Pfam MMR_HSR1 UniProtKB/TrEMBL
  YqeH-like_C UniProtKB/TrEMBL
PROSITE G_CP UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8C2V8Q9 ENTREZGENE, UniProtKB/TrEMBL