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Gene: Usp18 (ubiquitin specific peptidase 18) Chinchilla lanigera

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Symbol:

Usp18

Name:

ubiquitin specific peptidase 18

RGD ID:

8896359

Description:

ENCODES a protein that exhibits ISG15-specific peptidase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); regulation of inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Aicardi-Goutieres syndrome (ortholog); Chronic Hepatitis C (ortholog); FOUND IN cytosol (ortholog); intracellular membrane-bounded organelle (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ubl carboxyl-terminal hydrolase 18

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	6,171,569 - 6,203,091 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	6,171,575 - 6,200,879 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Lung Injury (ISO)

Aicardi-Goutieres syndrome (ISO)

Chronic Hepatitis C (ISO)

DiGeorge syndrome (ISO)

genetic disease (ISO)

immunodeficiency 51 (ISO)

leiomyosarcoma (ISO)

Lung Neoplasms (ISO)

Neurodevelopmental Disorders (ISO)

Polyarteritis Nodosa, Childhood-Onset (ISO)

Pseudo-TORCH Syndrome 2 (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antiviral innate immune response (ISO)

negative regulation of type I interferon-mediated signaling pathway (ISO)

regulation of inflammatory response (ISO)

response to bacterium (ISO)

response to stilbenoid (ISO)

Cellular Component

cytosol (ISO)

intracellular membrane-bounded organelle (ISO)

nucleus (ISO)

Molecular Function

ISG15-specific peptidase activity (ISO)

molecular adaptor activity (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Usp18
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	6,171,569 - 6,203,091 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	6,171,575 - 6,200,879 (+)	NCBI	ChiLan1.0	ChiLan1.0

USP18
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	18,150,170 - 18,177,397 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	18,149,843 - 18,177,397 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	18,632,937 - 18,660,164 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	17,012,758 - 17,040,164 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	17,007,311 - 17,034,714	NCBI
Celera	22	2,251,821 - 2,269,866 (+)	NCBI		Celera
Cytogenetic Map	22	q11.21	NCBI
HuRef	22	2,445,183 - 2,472,579 (+)	NCBI		HuRef
CHM1_1	22	18,632,478 - 18,659,884 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	18,822,080 - 18,849,307 (+)	NCBI		T2T-CHM13v2.0

Usp18
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	121,222,865 - 121,247,876 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	121,222,865 - 121,247,876 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	121,245,906 - 121,270,917 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	121,245,906 - 121,270,917 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	121,195,924 - 121,220,935 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	121,211,575 - 121,236,536 (+)	NCBI		MGSCv36	mm8
Celera	6	123,079,923 - 123,105,170 (+)	NCBI		Celera
Cytogenetic Map	6	F1	NCBI
cM Map	6	57.17	NCBI

Usp18
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	156,143,770 - 156,171,292 (+)	NCBI		GRCr8
mRatBN7.2	4	154,471,634 - 154,499,154 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	154,471,592 - 154,499,144 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	160,737,808 - 160,765,283 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	156,521,289 - 156,548,767 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	155,144,802 - 155,172,259 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	153,812,312 - 153,834,374 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	153,805,993 - 153,834,430 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	220,901,558 - 220,922,139 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	157,692,720 - 157,694,884 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	143,317,875 - 143,338,351 (+)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

USP18
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	28,464,266 - 28,491,820 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	31,012,239 - 31,041,912 (+)	NCBI		NHGRI_mPanPan1

USP18
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	45,739,845 - 45,814,668 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	868,159 - 943,927 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	46,107,395 - 46,183,398 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	46,106,886 - 46,183,378 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	46,041,070 - 46,116,807 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	46,008,145 - 46,083,815 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	223,830 - 299,560 (-)	NCBI		UU_Cfam_GSD_1.0

Usp18
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	109,829,924 - 109,854,928 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936807	1,090,882 - 1,114,770 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936807	1,090,928 - 1,116,166 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

USP18
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	70,183,308 - 70,229,572 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	70,183,321 - 70,227,990 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	72,536,548 - 72,595,957 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Usp18
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624735	9,158,597 - 9,187,503 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005395987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013520264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013520266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01045222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01045223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01045224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01045225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCQ01154519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000023698 ⟹ ENSCLAP00000023476

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955454	6,171,569 - 6,203,091 (+)	Ensembl

RefSeq Acc Id:

XM_005395987 ⟹ XP_005396044

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955454	6,171,575 - 6,200,879 (+)	NCBI

Sequence:

show sequence

CCCAGGCGCAGGACCCGCGACGCCGTGGCTCTTGCACACTCTGCTCCCGGCTGCGTGCTCCACC
GGAGCTGGGGCGGGACCCCACGTCGGATTTGGATTTAGCGGCGGAGGCTTGGCGCCCGCGAGGC
TCATAAGGGCGTTCCACCGCACCTGGACCTGTGAGCGCCTCCTGGAAGTGAAGTTGTGGCATCC
TGCACGCAGCCTGGCAGCCTTGACTCAGGGAGCTTTGAGGCAGTTGCGGACGGGCATGACGCTT
GGGTTCCCGGGGGACACCTGCCAGTCAGCCCTGGCGGAGTCTCAGCAGCGCTCAGGACAGTCCT
TTGAGAAGGGCGAGAACAGCGACATGAAGAGGAAGAGACAGCCGCCCAGAGAGCTCAGCGCCTG
GGACCACCCTCGCGGCCTGGTTGGTTTACACAACATTGGACAGACCTGTTGCCTTAACTCCTTG
ATTCATGTGCTCACAATGAACATGGACTTCACCAAGATACTGAAGAGGATAACAGTGCCGAAGG
TCTCAGAAGAGCAGAGGAGAAGCGTCCCCTTCCAGCTGCTGCTGCTGCTGGAGAAGATGCAGGA
CGGCCGGCAGAGGGCGGTGCGGCCCACGGAGCTGGCCAGCTGCCTGCAGAAGAACAACGTGCCA
CTGTTTGTCCAGCACGATGCTGCTCAGCTCTACCTTACCGTCTGGAACCTAATCAAGGACCAAA
TCACGGACGTGGATTTGGCAGAGAGGCTGCAGGACTTGTACACCATCCGGGTGAAAGAGACCTT
GGTATGCCTAGATTGCTCCGTGGAAAGCAGCAGAGATAGTAGCTTGCTGACCCTCCCTGTTTCT
CTTTTTGATACGGATTCAAAACCCCTTAGAACACTGGAGGATGCCCTGCGCCATTTCTTCCAGT
CCAGGGAGCTATGCAAGAAAAGCAAATGCTTCTGTCAGAACTGTGGGCAGAAGACACACAGGAA
ACAGGCCTTGAAGCTGACCCGTTTGCCCCAGACTTTGACCATCCACCTCATGCGGTTCTCCATC
AAGAATTCAAGGACAGAAAAGGTCTGCCATTCGCTGTATTTCCCCGAGAGCTTGGATTTCAGCC
AGGTTCTTCCTAGCGAGCAGCACACAGGTGAAGCAGAGGAGCAGGATGAGGGACAGTATGAACT
CTTTGCTGTGATCGCCCACACGGGGATGGCTGACTTCGGCCATTACTGCGCCTATATCCGGAAT
CCCGTGGATGGAAAATGGTTCTGCTTCAATGACTCCCATGTTTGCTGGGTGTCCTGGAAGGACA
TCCAATGCACCTACGGAAATCACAACTACCGCTGGCAGGAAACTGCGTATCTTCTGGTTTACAT
GAAGATGGAGTCCTGATGGATACACTCTAAACCTTGGGAGACTGACAAACTGGTGTTTTCCTTT
TCTGTTTCCTGGATCTGGTAGATTCTTCCAAGAGATTCTGCAGTGAGACGAAGCATAATTTTCT
GCTGTATAATTAAACCTTGTGCACAACTGTGAGTGACCATTGCTATGCTTTGGATGCAGCCCAT
GTGTGGCAGGTGGGGTCTCCAGCATGGCAGTGAGGGGCTGGTAGAAGCTCGAAGAGGCAAAGCC
TGGTAGGAAGTAACAAGGTGCGTGGGATTGGCCCATCTGTACCCTGGTGGTACCCTTCCCATTT
CTCAGTCACATTTTGATGAAGTGGGAAGGGCTCTTGCCAAGATGCCAGCGCCATGCTGGGTGGA
TCCTCCAGCCACCAGAATTGTGAACCAAATAAACTTCTTTACTTTACAAAGTA

hide sequence

RefSeq Acc Id:

XM_013520264 ⟹ XP_013375718

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955454	6,177,135 - 6,200,879 (+)	NCBI

Sequence:

show sequence

ATTACAGGTGTGCATCACCATGCCCACACTCTCACATTTCTGAAGCGCCCTTTTGCCAGCCAGG
GCGTTCCACCGCACCTGGACCTGTGAGCGCCTCCTGGAAGTGAAGTTGTGGCATCCTGCACGCA
GCCTGGCAGCCTTGACTCAGGGAGCTTTGAGGCAGTTGCGGACGGGCATGACGCTTGGGTTCCC
GGGGGACACCTGCCAGTCAGCCCTGGCGGAGTCTCAGCAGCGCTCAGGACAGTCCTTTGAGAAG
GGCGAGAACAGCGACATGAAGAGGAAGAGACAGCCGCCCAGAGAGCTCAGCGCCTGGGACCACC
CTCGCGGCCTGGTTGGTTTACACAACATTGGACAGACCTGTTGCCTTAACTCCTTGATTCATGT
GCTCACAATGAACATGGACTTCACCAAGATACTGAAGAGGATAACAGTGCCGAAGGTCTCAGAA
GAGCAGAGGAGAAGCGTCCCCTTCCAGCTGCTGCTGCTGCTGGAGAAGATGCAGGACGGCCGGC
AGAGGGCGGTGCGGCCCACGGAGCTGGCCAGCTGCCTGCAGAAGAACAACGTGCCACTGTTTGT
CCAGCACGATGCTGCTCAGCTCTACCTTACCGTCTGGAACCTAATCAAGGACCAAATCACGGAC
GTGGATTTGGCAGAGAGGCTGCAGGACTTGTACACCATCCGGGTGAAAGAGACCTTGGTATGCC
TAGATTGCTCCGTGGAAAGCAGCAGAGATAGTAGCTTGCTGACCCTCCCTGTTTCTCTTTTTGA
TACGGATTCAAAACCCCTTAGAACACTGGAGGATGCCCTGCGCCATTTCTTCCAGTCCAGGGAG
CTATGCAAGAAAAGCAAATGCTTCTGTCAGAACTGTGGGCAGAAGACACACAGGAAACAGGCCT
TGAAGCTGACCCGTTTGCCCCAGACTTTGACCATCCACCTCATGCGGTTCTCCATCAAGAATTC
AAGGACAGAAAAGGTCTGCCATTCGCTGTATTTCCCCGAGAGCTTGGATTTCAGCCAGGTTCTT
CCTAGCGAGCAGCACACAGGTGAAGCAGAGGAGCAGGATGAGGGACAGTATGAACTCTTTGCTG
TGATCGCCCACACGGGGATGGCTGACTTCGGCCATTACTGCGCCTATATCCGGAATCCCGTGGA
TGGAAAATGGTTCTGCTTCAATGACTCCCATGTTTGCTGGGTGTCCTGGAAGGACATCCAATGC
ACCTACGGAAATCACAACTACCGCTGGCAGGAAACTGCGTATCTTCTGGTTTACATGAAGATGG
AGTCCTGATGGATACACTCTAAACCTTGGGAGACTGACAAACTGGTGTTTTCCTTTTCTGTTTC
CTGGATCTGGTAGATTCTTCCAAGAGATTCTGCAGTGAGACGAAGCATAATTTTCTGCTGTATA
ATTAAACCTTGTGCACAACTGTGAGTGACCATTGCTATGCTTTGGATGCAGCCCATGTGTGGCA
GGTGGGGTCTCCAGCATGGCAGTGAGGGGCTGGTAGAAGCTCGAAGAGGCAAAGCCTGGTAGGA
AGTAACAAGGTGCGTGGGATTGGCCCATCTGTACCCTGGTGGTACCCTTCCCATTTCTCAGTCA
CATTTTGATGAAGTGGGAAGGGCTCTTGCCAAGATGCCAGCGCCATGCTGGGTGGATCCTCCAG
CCACCAGAATTGTGAACCAAATAAACTTCTTTACTTTACAAAGTA

hide sequence

RefSeq Acc Id:

XM_013520266 ⟹ XP_013375720

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955454	6,177,133 - 6,200,879 (+)	NCBI

Sequence:

show sequence

GGATTACAGGTGTGCATCACCATGCCCACACTCTCACATTTCTGAAGCGCCCTTTTGCCAGCCA
GGGCGTTCCACCGCACCTGGACCTGTGAGCGCCTCCTGGAAGTGAAGTTGTGGCATCCTGCACG
CAGCCTGGCAGCCTTGACTCAGGGAGCTTTGAGGCAGTTGCGGACGGGCATGACGCTTGGGTTC
CCGGGGGACACCTGCCAGTCAGCCCTGGCGGAGTCTCAGCAGCGCTCAGGACAGTCCTTTGAGA
AGGGCGAGAACAGCGACATGAAGAGGAAGAGACAGCCGCCCAGAGAGCTCAGCGCCTGGGACCA
CCCTCGCGGCCTGGTTGGTTTACACAACATTGGACAGACCTGTTGCCTTAACTCCTTGATTCAT
GTGCTCACAATGAACATGGACTTCACCAAGATACTGAAGAGGATAACAGTGCCGAAGGTCTCAG
AAGAGCAGAGGAGAAGCGTCCCCTTCCAGCTGCTGCTGCTGCTGGAGAAGATGCAGGACGGCCG
GCAGAGGGCGGTGCGGCCCACGGAGCTGGCCAGCTGCCTGCAGAAGAACAACGTGCCACTGTTT
GTCCAGCACGATGCTGCTCAGCTCTACCTTACCGTCTGGAACCTAATCAAGGACCAAATCACGG
ACGTGGATTTGGCAGAGAGGCTGCAGGACTTGTACACCATCCGGGTGAAAGAGACCTTGGAGGA
TGCCCTGCGCCATTTCTTCCAGTCCAGGGAGCTATGCAAGAAAAGCAAATGCTTCTGTCAGAAC
TGTGGGCAGAAGACACACAGGAAACAGGCCTTGAAGCTGACCCGTTTGCCCCAGACTTTGACCA
TCCACCTCATGCGGTTCTCCATCAAGAATTCAAGGACAGAAAAGGTCTGCCATTCGCTGTATTT
CCCCGAGAGCTTGGATTTCAGCCAGGTTCTTCCTAGCGAGCAGCACACAGGTGAAGCAGAGGAG
CAGGATGAGGGACAGTATGAACTCTTTGCTGTGATCGCCCACACGGGGATGGCTGACTTCGGCC
ATTACTGCGCCTATATCCGGAATCCCGTGGATGGAAAATGGTTCTGCTTCAATGACTCCCATGT
TTGCTGGGTGTCCTGGAAGGACATCCAATGCACCTACGGAAATCACAACTACCGCTGGCAGGAA
ACTGCGTATCTTCTGGTTTACATGAAGATGGAGTCCTGATGGATACACTCTAAACCTTGGGAGA
CTGACAAACTGGTGTTTTCCTTTTCTGTTTCCTGGATCTGGTAGATTCTTCCAAGAGATTCTGC
AGTGAGACGAAGCATAATTTTCTGCTGTATAATTAAACCTTGTGCACAACTGTGAGTGACCATT
GCTATGCTTTGGATGCAGCCCATGTGTGGCAGGTGGGGTCTCCAGCATGGCAGTGAGGGGCTGG
TAGAAGCTCGAAGAGGCAAAGCCTGGTAGGAAGTAACAAGGTGCGTGGGATTGGCCCATCTGTA
CCCTGGTGGTACCCTTCCCATTTCTCAGTCACATTTTGATGAAGTGGGAAGGGCTCTTGCCAAG
ATGCCAGCGCCATGCTGGGTGGATCCTCCAGCCACCAGAATTGTGAACCAAATAAACTTCTTTA
CTTTACAAAGTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005396044	(Get FASTA)	NCBI Sequence Viewer
	XP_013375718	(Get FASTA)	NCBI Sequence Viewer
	XP_013375720	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000023476
	ENSCLAP00000023476.1

RefSeq Acc Id:	XP_005396044 ⟸ XM_005395987
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2W0Q6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLGFPGDTCQSALAESQQRSGQSFEKGENSDMKRKRQPPRELSAWDHPRGLVGLHNIGQTCCL NSLIHVLTMNMDFTKILKRITVPKVSEEQRRSVPFQLLLLLEKMQDGRQRAVRPTELASCLQKN NVPLFVQHDAAQLYLTVWNLIKDQITDVDLAERLQDLYTIRVKETLVCLDCSVESSRDSSLLTL PVSLFDTDSKPLRTLEDALRHFFQSRELCKKSKCFCQNCGQKTHRKQALKLTRLPQTLTIHLMR FSIKNSRTEKVCHSLYFPESLDFSQVLPSEQHTGEAEEQDEGQYELFAVIAHTGMADFGHYCAY IRNPVDGKWFCFNDSHVCWVSWKDIQCTYGNHNYRWQETAYLLVYMKMES hide sequence

RefSeq Acc Id:

XP_013375720 ⟸ XM_013520266

- Peptide Label:

isoform X2

- Sequence:

show sequence

MTLGFPGDTCQSALAESQQRSGQSFEKGENSDMKRKRQPPRELSAWDHPRGLVGLHNIGQTCCL
NSLIHVLTMNMDFTKILKRITVPKVSEEQRRSVPFQLLLLLEKMQDGRQRAVRPTELASCLQKN
NVPLFVQHDAAQLYLTVWNLIKDQITDVDLAERLQDLYTIRVKETLEDALRHFFQSRELCKKSK
CFCQNCGQKTHRKQALKLTRLPQTLTIHLMRFSIKNSRTEKVCHSLYFPESLDFSQVLPSEQHT
GEAEEQDEGQYELFAVIAHTGMADFGHYCAYIRNPVDGKWFCFNDSHVCWVSWKDIQCTYGNHN
YRWQETAYLLVYMKMES

hide sequence

RefSeq Acc Id:	XP_013375718 ⟸ XM_013520264
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2W0Q6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLGFPGDTCQSALAESQQRSGQSFEKGENSDMKRKRQPPRELSAWDHPRGLVGLHNIGQTCCL NSLIHVLTMNMDFTKILKRITVPKVSEEQRRSVPFQLLLLLEKMQDGRQRAVRPTELASCLQKN NVPLFVQHDAAQLYLTVWNLIKDQITDVDLAERLQDLYTIRVKETLVCLDCSVESSRDSSLLTL PVSLFDTDSKPLRTLEDALRHFFQSRELCKKSKCFCQNCGQKTHRKQALKLTRLPQTLTIHLMR FSIKNSRTEKVCHSLYFPESLDFSQVLPSEQHTGEAEEQDEGQYELFAVIAHTGMADFGHYCAY IRNPVDGKWFCFNDSHVCWVSWKDIQCTYGNHNYRWQETAYLLVYMKMES hide sequence

Ensembl Acc Id:

ENSCLAP00000023476 ⟸ ENSCLAT00000023698

Protein Domains

USP

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000016101	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000023698	ENTREZGENE
	ENSCLAT00000023698.1	UniProtKB/TrEMBL
Gene3D-CATH	Cysteine proteinases	UniProtKB/TrEMBL
InterPro	Papain-like_cys_pep_sf	UniProtKB/TrEMBL
	Peptidase_C19	UniProtKB/TrEMBL
	Peptidase_C19_UCH	UniProtKB/TrEMBL
	USP_CS	UniProtKB/TrEMBL
	USP_dom	UniProtKB/TrEMBL
NCBI Gene	Usp18	ENTREZGENE
PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	UniProtKB/TrEMBL
	UBL CARBOXYL-TERMINAL HYDROLASE 18-RELATED	UniProtKB/TrEMBL
Pfam	UCH	UniProtKB/TrEMBL
PROSITE	USP_2	UniProtKB/TrEMBL
	USP_3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54001	UniProtKB/TrEMBL
UniProt	A0A8C2W0Q6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - OMIM