Hm13 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 29,362,724 - 29,408,840 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 29,365,722 - 29,408,788 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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HM13 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 20 | 31,514,442 - 31,569,543 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 31,514,428 - 31,577,923 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 30,102,245 - 30,157,346 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 29,565,902 - 29,621,031 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 29,565,901 - 29,591,257 | NCBI | | | | | Celera | 20 | 26,858,423 - 26,913,551 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | q11.21 | NCBI | | | | | HuRef | 20 | 26,890,440 - 26,945,730 (+) | NCBI | | HuRef | | | CHM1_1 | 20 | 30,006,150 - 30,061,281 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 33,238,668 - 33,293,768 (+) | NCBI | | T2T-CHM13v2.0 | | |
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H13 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 152,511,292 - 152,550,590 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 152,511,381 - 152,550,590 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 152,669,422 - 152,708,668 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 152,669,461 - 152,708,670 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 152,495,197 - 152,534,404 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 152,360,940 - 152,398,265 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 158,485,404 - 158,524,533 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | H1 | NCBI | | | | | cM Map | 2 | 75.41 | NCBI | | | | |
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Hm13 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 161,606,059 - 161,641,382 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 141,145,792 - 141,183,557 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 141,145,782 - 141,184,703 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 145,050,767 - 145,086,080 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 153,634,606 - 153,669,917 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 151,375,215 - 151,410,387 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 148,150,695 - 148,189,623 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 148,150,698 - 148,189,623 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 154,555,170 - 154,594,098 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 143,020,648 - 143,059,566 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 142,892,504 - 142,961,304 (+) | NCBI | | | | | Celera | 3 | 139,895,459 - 139,934,248 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q41 | NCBI | | | | |
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HM13 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 21 | 37,205,681 - 37,262,331 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 37,198,811 - 37,255,442 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 27,803,597 - 27,859,384 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 28,441,297 - 28,499,344 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 28,441,285 - 28,501,001 (+) | Ensembl | panpan1.1 | | panPan2 | |
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HM13 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 24 | 21,026,851 - 21,067,773 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 21,026,366 - 21,071,165 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 20,674,903 - 20,715,412 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 21,713,695 - 21,754,672 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 21,713,704 - 21,754,672 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 20,992,044 - 21,032,813 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 21,097,128 - 21,137,662 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 21,527,475 - 21,567,990 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Hm13 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 170,108,510 - 170,152,239 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936485 | 18,539,826 - 18,583,813 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936485 | 18,539,873 - 18,583,605 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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HM13 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 35,248,570 - 35,288,539 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 35,248,575 - 35,288,431 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 40,078,434 - 40,117,783 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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HM13 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 35,925,316 - 35,975,209 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 35,925,290 - 35,977,982 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 90,980,941 - 91,032,531 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Hm13 (Heterocephalus glaber - naked mole-rat) |
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