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Gene: Chrm3 (cholinergic receptor muscarinic 3) Chinchilla lanigera

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Symbol:

Chrm3

Name:

cholinergic receptor muscarinic 3

RGD ID:

8755646

Description:

ENCODES a protein that exhibits acetylcholine binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); G protein-coupled acetylcholine receptor binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; ASSOCIATED WITH Ascites (ortholog); asthma (ortholog); bladder disease (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); basal plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cholinergic receptor, muscarinic 3; muscarinic acetylcholine receptor M3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955492	958,949 - 960,721 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955492	958,347 - 1,429,832 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Ascites (ISO)

asthma (ISO)

bladder disease (ISO)

Chemical and Drug Induced Liver Injury (ISO)

chronic obstructive pulmonary disease (ISO)

cryptorchidism (ISO)

gastrointestinal stromal tumor (ISO)

Hereditary Leiomyomatosis and Renal Cell Cancer (ISO)

liver cirrhosis (ISO)

megacystis-microcolon-intestinal hypoperistalsis syndrome (ISO)

Neurodevelopmental Disorders (ISO)

parathyroid carcinoma (ISO)

prune belly syndrome (ISO)

pulmonary fibrosis (ISO)

small cell carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acetylcholine receptor signaling pathway (ISO)

calcium-mediated signaling (ISO)

G protein-coupled acetylcholine receptor signaling pathway (ISO)

ligand-gated ion channel signaling pathway (ISO)

negative regulation of heart rate by acetylcholine (ISO)

phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway (ISO)

positive regulation of insulin secretion (ISO)

positive regulation of smooth muscle contraction (ISO)

positive regulation of vascular associated smooth muscle contraction (ISO)

positive regulation of vasoconstriction (ISO)

response to acetylcholine (ISO)

saliva secretion (ISO)

smooth muscle contraction (ISO)

synaptic transmission, cholinergic (ISO)

Cellular Component

asymmetric synapse (ISO)

axon terminus (ISO)

basal plasma membrane (ISO)

dendrite (ISO)

glutamatergic synapse (ISO)

plasma membrane (ISO)

postsynaptic density membrane (ISO)

presynaptic membrane (ISO)

Molecular Function

acetylcholine binding (ISO)

G protein-coupled acetylcholine receptor activity (ISO)

G protein-coupled acetylcholine receptor binding (ISO)

protein binding (ISO)

quaternary ammonium group binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family (ISO)

cimetidine pharmacodynamics pathway (ISO)

esomeprazole pharmacodynamics pathway (ISO)

famotidine pharmacodynamics pathway (ISO)

G protein mediated signaling pathway via Galphaq family (ISO)

lansoprazole pharmacodynamics pathway (ISO)

nizatidine pharmacodynamics pathway (ISO)

omeprazole pharmacodynamics pathway (ISO)

pantoprazole pharmacodynamics pathway (ISO)

pirenzepine pharmacodynamics pathway (ISO)

rabeprazole pharmacodynamics pathway (ISO)

ranitidine pharmacodynamics pathway (ISO)

roxatidine acetate pharmacodynamics pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Chrm3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955492	958,949 - 960,721 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955492	958,347 - 1,429,832 (-)	NCBI	ChiLan1.0	ChiLan1.0

CHRM3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	239,386,568 - 239,915,450 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	239,386,565 - 239,915,452 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	239,549,868 - 240,078,750 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	237,858,996 - 238,139,343 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	236,118,413 - 236,398,756	NCBI
Celera	1	213,047,986 - 213,328,202 (+)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI
HuRef	1	210,250,783 - 210,531,551 (+)	NCBI		HuRef
CHM1_1	1	241,065,995 - 241,346,299 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	238,798,998 - 239,328,607 (+)	NCBI		T2T-CHM13v2.0

Chrm3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	9,925,522 - 10,411,131 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	9,925,522 - 10,410,883 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	9,875,486 - 10,361,062 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	9,875,486 - 10,360,847 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	9,875,859 - 10,360,049 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	9,875,859 - 10,360,049 (-)	NCBI		MGSCv36	mm8
Celera	13	9,820,205 - 10,316,018 (-)	NCBI		Celera
Cytogenetic Map	13	A1	NCBI
cM Map	13	3.72	NCBI

Chrm3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	64,696,549 - 65,158,622 (+)	NCBI		GRCr8
mRatBN7.2	17	60,005,137 - 60,467,250 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	60,005,202 - 60,467,278 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	63,209,233 - 63,671,688 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	67,212,340 - 67,674,776 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	61,366,663 - 61,834,600 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	63,990,599 - 64,463,222 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	63,990,599 - 63,994,169 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	65,753,665 - 66,217,211 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	71,214,906 - 71,218,463 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	71,081,449 - 71,229,296 (+)	NCBI
Celera	17	60,109,356 - 60,562,246 (-)	NCBI		Celera
Cytogenetic Map	17	q12.1	NCBI

CHRM3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	9,253,466 - 9,776,967 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	9,478,692 - 10,000,031 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	214,931,514 - 215,452,739 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	219,927,079 - 220,446,830 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

CHRM3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	504,663 - 999,550 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	506,990 - 520,613 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	547,625 - 1,042,706 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	528,395 - 1,026,611 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	529,298 - 1,025,023 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	522,413 - 1,023,728 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	628,064 - 1,134,213 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	882,752 - 1,377,924 (-)	NCBI		UU_Cfam_GSD_1.0

Chrm3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	37,787,915 - 38,208,967 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936484	13,954,887 - 13,956,659 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936484	13,953,141 - 14,373,174 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CHRM3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	51,828,231 - 51,830,003 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	51,818,625 - 52,363,662 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	55,361,402 - 55,363,168 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CHRM3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	76,772,212 - 77,009,433 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	77,001,477 - 77,003,249 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	78,598,053 - 79,113,674 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Chrm3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624775	10,949,983 - 10,951,755 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624775	10,948,075 - 11,427,898 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005404924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013504730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013504731	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013504732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013504733	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013504734	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001231254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01060652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060655	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060656	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060657	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01098808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000025960 ⟹ ENSCLAP00000025670

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955492	958,949 - 960,721 (-)	Ensembl

RefSeq Acc Id:

XM_005404924 ⟹ XP_005404981

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955492	958,347 - 1,429,832 (-)	NCBI

Sequence:

show sequence

GCAGGAGGAGGAAAGAGAGGAGGAACGGGCCAGCTGTAGCCACGACCGCCACCACCAGGCAGAG
GAAGGGCTCCTGGGAAGGAAAAGACCCTCCTCCCCTTTGGAGCCCCTTCTGTATGCTTCTGCAG
GGGGAAAAAAAGGAATACAAGATCAAGGAGACGAAAAGAAGGGTGGAAAAGTGAGAGGGCAGAC
AGAAAGAGAAAGAGGGGGAAAAAGGCTTGGACAGAAAGAGTCAGGACGTGCGTGGTGCCAAGGC
GCTGCTCCCCTTGGGCAGGTGGCGTGGCCGCTGCCCGGAGGCGGCATGTGACGAGCAGCCTCAG
CTGCCCGCGGGCACAGCGCTTTCAGTCCCGGGGCGCATGCTGCGGGGCGAGACTGTGCCATCCC
AGATTCCAGAGCTCCGGATCGGTTTGCGGAAGCGACTGCAGCGCTTTGGGGGAGACAGGCGATG
ACTGGGCGGGCGACTCCGCGCAGAGACGCGCGACCCTAAGGACATTCGCTCCCTGATCTCCGAG
CGGCGGGGACCACGGCACGCTGGCTTGGACACCCCGGGCGCTTCGGCAGGAGCGGAGGAGCTGC
GTGGGACGTTACCTGGAGCGCAGCTGCCCAGACCTTCAGCAAGAGTTTGGCACATGGAGGAAGG
AAGTCAGAGTCCCAGAGATTGTCTTCAGGAGAACTTCATCCTAACAGATATGAACAGTAATGGC
CTCTGTCTCACTTCTGAGTTCCTTGGTACACTGTGGGCTGAATGAACTGTACCCATCTCCATCA
TGATATGCAACACCAAGTCTTGTCACTACATCTGTGTTCTGCTTAGAGGCCAAATAAATGACAT
TCAGAACTTCAGCTAAGGTACAGTAAGACTATGTCAGAGAGTCACAATGACCTTGCACAATAAC
AGTACAACCTTGCCTTTGTTTCCAAACATCAGCACCTCCTGGATACACAGCCCGTCAGAAGCAG
GGCTACCCCCAGGGACAGTCACTCATTTCGGCAGCTACAACATTTCACAAGCAGCTGGGAATTT
CTCCTCCCTAAATGATACCACCAGTGACCCCTTAGGAGGTCATACCATCTGGCAAGTGGTCTTT
ATCGCATTCTTAACGGGCTTCCTGGCCCTGGTGACCATCATCGGCAACATCTTAGTCATAGTTG
CATTTAAGGTCAACAAACAACTGAAGACAGTCAACAACTACTTCCTCCTAAGCCTGGCCTGTGC
TGATCTGATCATCGGGGTCATTTCCATGAATCTGTTTACTACCTACATCATCATGAACAGATGG
GCTTTGGGGAACTTGGCCTGTGATCTCTGGCTTTCCATTGACTATGTGGCCAGCAATGCCTCTG
TCATGAACCTTCTGGTCATTAGCTTTGACAGGTACTTTTCCATCACACGGCCACTCACATACCG
AGCCAAAAGAACAACAAAGAGAGCCGGTGTGATGATTGGTCTGGCTTGGGTCATCTCCTTTGTC
CTTTGGGCTCCTGCCATCTTGTTCTGGCAGTATTTTGTGGGAAAGCGGACTGTGCCTCCAGGGG
AGTGTTTCATTCAGTTTCTCAGTGAGCCTACTATCACCTTCGGCACGGCCATTGCCGCCTTTTA
TATGCCTGTCACCATTATGACTATTTTGTACTGGAGAATCTATAAAGAAACTGAAAAACGTACC
AAAGAGCTTGCTGGCCTGCAGGCCTCTGGGACAGAAGCAGAGACAGAAAACTTTGTCCACCCCA
CAGGCAGTTCTCGAAGCTGCAGCAGCTATGAGCTGCAGCAGCAAAGCCTGAAGCACTCATCCAG
GAGAAAGTACGGCCGCTGCCACTTCTGGTTCACAACTAAGAGCTGGAAGCCCAGCGCTGAGCAG
ATGGACCAAGACCACAGCAGCAGTGACAGCTGGAACAACAATGATGCTGCTGCTTCCCTGGAAA
ACTCCGCCTCCTCCGATGAGGAGGACATTGGCTCAGAGACAAGAGCCATCTACTCTATTGTGCT
CAAGCTTCCAGGGCACAGCACCATCCTCAACTCCACCAAACTGCCCTCCTCTGACAACCTGCAA
GTACCTGAAGAAGATCTAGGGCCAGTGGACATGGAGAGAAATGCCAGTAAGCTTCAGACCCAGA
AGAGTATGGACGATGGTGGCAGTTTTCAAAAAAGCTTCTCCAAGCTTCCCATCCAGTTGGAGTC
CACCGTGGACACAGCCAAGACTTCTGATGCCAACTCCTCGGTGGGTAAGACCATGGCCACTCTA
CCTCTGTCCTTCAAGGAAGCCACACTGGCCAAGAGGTTTGCTCTGAAGACCAGAAGTCAGATCA
CAAAGCGGAAGAGGATGTCCCTCATCAAGGAGAAGAAGGCAGCGCAGACCCTCAGTGCCATCTT
ACTCGCCTTTATCATCACGTGGACCCCCTACAACATCATGGTTCTGGTGAATACTTTTTGTGAC
AGCTGCATACCCAAAACCTATTGGAATCTGGGCTACTGGCTGTGCTACATCAACAGCACCGTGA
ACCCTGTGTGCTATGCGTTGTGCAACAAAACCTTCAGAAACACCTTCAAGATGCTACTGCTGTG
CCAGTGTGACAAGAGGAAGAGACGCAAGCAGCAGTACCAGCAAAGACAGTCTGTCATTTTCCAC
AAGCGTGTGCCTGAGCAGGCCTTGTAGAAGGAGCTTTGATGCATAGCAGTGACAAAACGCACAC
ATCAACCCACAGACCTTAGAAGGAATAAGGTGAGGGTGGGGGTGATTCCTGGTGGTGATAAAAA
AAAAAATTTTATCACCCACATATGAAAGAAGCTGCTTGTTTACTGACCCATTGAATAAACTGAT
TTTAACATAAAAAGTAAAATACCAATTCAGCAAAAAAAAAAAAAGCCTACTACTGAATATAAAG
AAATTTATTCTGAAATAGACATTGTTTCTTTTTTTAAAAAAGAGGAAAAAAATATTGCTTCACA
GCAAATTGATTTGCCCGGGTCTTTTAATTCCTGTTAGCTCTGGAATTGCAGATAAACCTAGCCG
GCCCGATTGTGCTGTTCTTCCCAAGGATTCCAAGTGCCGATCCAGACCACATGTGGAATACATC
AGGCTCATGAATCTGTGGTTCTGAAATTATGCCGTATGTTGCAAAGCTGAACCTTCTTGTCCCA
ATAGAGCTTCCATCCTCTCTTTGGTGTGTTGTTGAACTCTATTTGTGGACTTGATTCCTGATTC
TCGCAAAATATTGTGTTGTGAGTTGGTTTAGTACAAATAAAAATGCATAAGTA

hide sequence

RefSeq Acc Id:

XM_013504730 ⟹ XP_013360184

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955492	958,347 - 1,429,832 (-)	NCBI

Sequence:

show sequence

GCAGGAGGAGGAAAGAGAGGAGGAACGGGCCAGCTGTAGCCACGACCGCCACCACCAGGCAGAG
GAAGGGCTCCTGGGAAGGAAAAGACCCTCCTCCCCTTTGGAGCCCCTTCTGTATGCTTCTGCAG
GGGGAAAAAAAGGAATACAAGATCAAGGAGACGAAAAGAAGGGTGGAAAAGTGAGAGGGCAGAC
AGAAAGAGAAAGAGGGGGAAAAAGGCTTGGACAGAAAGAGTCAGGACGTGCGTGGTGCCAAGGC
GCTGCTCCCCTTGGGCAGGTGGCGTGGCCGCTGCCCGGAGGCGGCATGTGACGAGCAGCCTCAG
CTGCCCGCGGGCACAGCGCTTTCAGTCCCGGGGCGCATGCTGCGGGGCGAGACTGTGCCATCCC
AGATTCCAGAGCTCCGGATCGGTTTGCGGAAGCGACTGCAGCGCTTTGGGGGAGACAGGCGATG
ACTGGGCGGGCGACTCCGCGCAGAGACGCGCGACCCTAAGGACATTCGCTCCCTGATCTCCGAG
CGGCGGGGACCACGGCACGCTGGCTTGGACACCCCGGGCGCTTCGGCAGGAGCGGAGGAGCTGC
GTGGGACGTTACCTGGAGCGCAGCTGCCCAGATATGAACAGTAATGGCCTCTGTCTCACTTCTG
AGTTCCTTGGTACACTGTGGGCTGAATGAACTGTACCCATCTCCATCATGATATGCAACACCAA
GTCTTGTCACTACATCTGTGTTCTGCTTAGAGGCCAAATAAATGACATTCAGAACTTCAGCTAA
GGTACAGTAAGACTATGTCAGAGAGTCACAATGACCTTGCACAATAACAGTACAACCTTGCCTT
TGTTTCCAAACATCAGCACCTCCTGGATACACAGCCCGTCAGAAGCAGGGCTACCCCCAGGGAC
AGTCACTCATTTCGGCAGCTACAACATTTCACAAGCAGCTGGGAATTTCTCCTCCCTAAATGAT
ACCACCAGTGACCCCTTAGGAGGTCATACCATCTGGCAAGTGGTCTTTATCGCATTCTTAACGG
GCTTCCTGGCCCTGGTGACCATCATCGGCAACATCTTAGTCATAGTTGCATTTAAGGTCAACAA
ACAACTGAAGACAGTCAACAACTACTTCCTCCTAAGCCTGGCCTGTGCTGATCTGATCATCGGG
GTCATTTCCATGAATCTGTTTACTACCTACATCATCATGAACAGATGGGCTTTGGGGAACTTGG
CCTGTGATCTCTGGCTTTCCATTGACTATGTGGCCAGCAATGCCTCTGTCATGAACCTTCTGGT
CATTAGCTTTGACAGGTACTTTTCCATCACACGGCCACTCACATACCGAGCCAAAAGAACAACA
AAGAGAGCCGGTGTGATGATTGGTCTGGCTTGGGTCATCTCCTTTGTCCTTTGGGCTCCTGCCA
TCTTGTTCTGGCAGTATTTTGTGGGAAAGCGGACTGTGCCTCCAGGGGAGTGTTTCATTCAGTT
TCTCAGTGAGCCTACTATCACCTTCGGCACGGCCATTGCCGCCTTTTATATGCCTGTCACCATT
ATGACTATTTTGTACTGGAGAATCTATAAAGAAACTGAAAAACGTACCAAAGAGCTTGCTGGCC
TGCAGGCCTCTGGGACAGAAGCAGAGACAGAAAACTTTGTCCACCCCACAGGCAGTTCTCGAAG
CTGCAGCAGCTATGAGCTGCAGCAGCAAAGCCTGAAGCACTCATCCAGGAGAAAGTACGGCCGC
TGCCACTTCTGGTTCACAACTAAGAGCTGGAAGCCCAGCGCTGAGCAGATGGACCAAGACCACA
GCAGCAGTGACAGCTGGAACAACAATGATGCTGCTGCTTCCCTGGAAAACTCCGCCTCCTCCGA
TGAGGAGGACATTGGCTCAGAGACAAGAGCCATCTACTCTATTGTGCTCAAGCTTCCAGGGCAC
AGCACCATCCTCAACTCCACCAAACTGCCCTCCTCTGACAACCTGCAAGTACCTGAAGAAGATC
TAGGGCCAGTGGACATGGAGAGAAATGCCAGTAAGCTTCAGACCCAGAAGAGTATGGACGATGG
TGGCAGTTTTCAAAAAAGCTTCTCCAAGCTTCCCATCCAGTTGGAGTCCACCGTGGACACAGCC
AAGACTTCTGATGCCAACTCCTCGGTGGGTAAGACCATGGCCACTCTACCTCTGTCCTTCAAGG
AAGCCACACTGGCCAAGAGGTTTGCTCTGAAGACCAGAAGTCAGATCACAAAGCGGAAGAGGAT
GTCCCTCATCAAGGAGAAGAAGGCAGCGCAGACCCTCAGTGCCATCTTACTCGCCTTTATCATC
ACGTGGACCCCCTACAACATCATGGTTCTGGTGAATACTTTTTGTGACAGCTGCATACCCAAAA
CCTATTGGAATCTGGGCTACTGGCTGTGCTACATCAACAGCACCGTGAACCCTGTGTGCTATGC
GTTGTGCAACAAAACCTTCAGAAACACCTTCAAGATGCTACTGCTGTGCCAGTGTGACAAGAGG
AAGAGACGCAAGCAGCAGTACCAGCAAAGACAGTCTGTCATTTTCCACAAGCGTGTGCCTGAGC
AGGCCTTGTAGAAGGAGCTTTGATGCATAGCAGTGACAAAACGCACACATCAACCCACAGACCT
TAGAAGGAATAAGGTGAGGGTGGGGGTGATTCCTGGTGGTGATAAAAAAAAAAATTTTATCACC
CACATATGAAAGAAGCTGCTTGTTTACTGACCCATTGAATAAACTGATTTTAACATAAAAAGTA
AAATACCAATTCAGCAAAAAAAAAAAAAGCCTACTACTGAATATAAAGAAATTTATTCTGAAAT
AGACATTGTTTCTTTTTTTAAAAAAGAGGAAAAAAATATTGCTTCACAGCAAATTGATTTGCCC
GGGTCTTTTAATTCCTGTTAGCTCTGGAATTGCAGATAAACCTAGCCGGCCCGATTGTGCTGTT
CTTCCCAAGGATTCCAAGTGCCGATCCAGACCACATGTGGAATACATCAGGCTCATGAATCTGT
GGTTCTGAAATTATGCCGTATGTTGCAAAGCTGAACCTTCTTGTCCCAATAGAGCTTCCATCCT
CTCTTTGGTGTGTTGTTGAACTCTATTTGTGGACTTGATTCCTGATTCTCGCAAAATATTGTGT
TGTGAGTTGGTTTAGTACAAATAAAAATGCATAAGTA

hide sequence

RefSeq Acc Id:

XM_013504731 ⟹ XP_013360185

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955492	958,347 - 1,429,208 (-)	NCBI

Sequence:

show sequence

TGCCACCAGGCGCTGGGCAAGGCGGGGGACAGGAGCAGCTGGCCTGCTTTCTTTCCTTATCTCC
TTGCGAAAGGAGAAAAAAGTTTTCAGTGCGGATAGGAAATGTTTTTGCCGGTGGAGTTTAAATG
AAAGACTGGGGAGGGTTGCGAAAGGTTGTTCTATGGATTTGGAGTGGAGGAGGTTTGAACCTGG
GATCGCGATCTGGTGCGGAACTGGAGCGGCAGGACTGAGGGTGGGGAACGCCGAAGTGGCATCC
AAGTGCACGAAAAGGAACGGAGTAGAGCGAGCGGTGGCCAGAGGAAAGCCGGGTTCGACCTACC
CAGCGCTCTTTCGCTTCGATTTTGTCTCCTTCCAACGCCAGATCCTAAGGCAAGAACCGCCGGA
CCAGCTCCGCTCGCTGTGTTTGTGCGCGCGTGAGTGGTGTTCTCAAAGAGGGCGGGTGGCAGCA
TTTGATTTCCTACCGTTTCTAAGAAAGCATCTGCCAACGTGGCAGCTATCATCTCAAAGAGTGA
AGAGGCGAATTTTGCACTTAAAGTAACACGGGCAAAGATATGAACAGTAATGGCCTCTGTCTCA
CTTCTGAGTTCCTTGGTACACTGTGGGCTGAATGAACTGTACCCATCTCCATCATGATATGCAA
CACCAAGTCTTGTCACTACATCTGTGTTCTGCTTAGAGGCCAAATAAATGACATTCAGAACTTC
AGCTAAGGTACAGTAAGACTATGTCAGAGAGTCACAATGACCTTGCACAATAACAGTACAACCT
TGCCTTTGTTTCCAAACATCAGCACCTCCTGGATACACAGCCCGTCAGAAGCAGGGCTACCCCC
AGGGACAGTCACTCATTTCGGCAGCTACAACATTTCACAAGCAGCTGGGAATTTCTCCTCCCTA
AATGATACCACCAGTGACCCCTTAGGAGGTCATACCATCTGGCAAGTGGTCTTTATCGCATTCT
TAACGGGCTTCCTGGCCCTGGTGACCATCATCGGCAACATCTTAGTCATAGTTGCATTTAAGGT
CAACAAACAACTGAAGACAGTCAACAACTACTTCCTCCTAAGCCTGGCCTGTGCTGATCTGATC
ATCGGGGTCATTTCCATGAATCTGTTTACTACCTACATCATCATGAACAGATGGGCTTTGGGGA
ACTTGGCCTGTGATCTCTGGCTTTCCATTGACTATGTGGCCAGCAATGCCTCTGTCATGAACCT
TCTGGTCATTAGCTTTGACAGGTACTTTTCCATCACACGGCCACTCACATACCGAGCCAAAAGA
ACAACAAAGAGAGCCGGTGTGATGATTGGTCTGGCTTGGGTCATCTCCTTTGTCCTTTGGGCTC
CTGCCATCTTGTTCTGGCAGTATTTTGTGGGAAAGCGGACTGTGCCTCCAGGGGAGTGTTTCAT
TCAGTTTCTCAGTGAGCCTACTATCACCTTCGGCACGGCCATTGCCGCCTTTTATATGCCTGTC
ACCATTATGACTATTTTGTACTGGAGAATCTATAAAGAAACTGAAAAACGTACCAAAGAGCTTG
CTGGCCTGCAGGCCTCTGGGACAGAAGCAGAGACAGAAAACTTTGTCCACCCCACAGGCAGTTC
TCGAAGCTGCAGCAGCTATGAGCTGCAGCAGCAAAGCCTGAAGCACTCATCCAGGAGAAAGTAC
GGCCGCTGCCACTTCTGGTTCACAACTAAGAGCTGGAAGCCCAGCGCTGAGCAGATGGACCAAG
ACCACAGCAGCAGTGACAGCTGGAACAACAATGATGCTGCTGCTTCCCTGGAAAACTCCGCCTC
CTCCGATGAGGAGGACATTGGCTCAGAGACAAGAGCCATCTACTCTATTGTGCTCAAGCTTCCA
GGGCACAGCACCATCCTCAACTCCACCAAACTGCCCTCCTCTGACAACCTGCAAGTACCTGAAG
AAGATCTAGGGCCAGTGGACATGGAGAGAAATGCCAGTAAGCTTCAGACCCAGAAGAGTATGGA
CGATGGTGGCAGTTTTCAAAAAAGCTTCTCCAAGCTTCCCATCCAGTTGGAGTCCACCGTGGAC
ACAGCCAAGACTTCTGATGCCAACTCCTCGGTGGGTAAGACCATGGCCACTCTACCTCTGTCCT
TCAAGGAAGCCACACTGGCCAAGAGGTTTGCTCTGAAGACCAGAAGTCAGATCACAAAGCGGAA
GAGGATGTCCCTCATCAAGGAGAAGAAGGCAGCGCAGACCCTCAGTGCCATCTTACTCGCCTTT
ATCATCACGTGGACCCCCTACAACATCATGGTTCTGGTGAATACTTTTTGTGACAGCTGCATAC
CCAAAACCTATTGGAATCTGGGCTACTGGCTGTGCTACATCAACAGCACCGTGAACCCTGTGTG
CTATGCGTTGTGCAACAAAACCTTCAGAAACACCTTCAAGATGCTACTGCTGTGCCAGTGTGAC
AAGAGGAAGAGACGCAAGCAGCAGTACCAGCAAAGACAGTCTGTCATTTTCCACAAGCGTGTGC
CTGAGCAGGCCTTGTAGAAGGAGCTTTGATGCATAGCAGTGACAAAACGCACACATCAACCCAC
AGACCTTAGAAGGAATAAGGTGAGGGTGGGGGTGATTCCTGGTGGTGATAAAAAAAAAAATTTT
ATCACCCACATATGAAAGAAGCTGCTTGTTTACTGACCCATTGAATAAACTGATTTTAACATAA
AAAGTAAAATACCAATTCAGCAAAAAAAAAAAAAGCCTACTACTGAATATAAAGAAATTTATTC
TGAAATAGACATTGTTTCTTTTTTTAAAAAAGAGGAAAAAAATATTGCTTCACAGCAAATTGAT
TTGCCCGGGTCTTTTAATTCCTGTTAGCTCTGGAATTGCAGATAAACCTAGCCGGCCCGATTGT
GCTGTTCTTCCCAAGGATTCCAAGTGCCGATCCAGACCACATGTGGAATACATCAGGCTCATGA
ATCTGTGGTTCTGAAATTATGCCGTATGTTGCAAAGCTGAACCTTCTTGTCCCAATAGAGCTTC
CATCCTCTCTTTGGTGTGTTGTTGAACTCTATTTGTGGACTTGATTCCTGATTCTCGCAAAATA
TTGTGTTGTGAGTTGGTTTAGTACAAATAAAAATGCATAAGTA

hide sequence

RefSeq Acc Id:

XM_013504732 ⟹ XP_013360186

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955492	958,347 - 1,429,832 (-)	NCBI

Sequence:

show sequence

GCAGGAGGAGGAAAGAGAGGAGGAACGGGCCAGCTGTAGCCACGACCGCCACCACCAGGCAGAG
GAAGGGCTCCTGGGAAGGAAAAGACCCTCCTCCCCTTTGGAGCCCCTTCTGTATGCTTCTGCAG
GGGGAAAAAAAGGAATACAAGATCAAGGAGACGAAAAGAAGGGTGGAAAAGTGAGAGGGCAGAC
AGAAAGAGAAAGAGGGGGAAAAAGGCTTGGACAGAAAGAGTCAGGACGTGCGTGGTGCCAAGGC
GCTGCTCCCCTTGGGCAGGTGGCGTGGCCGCTGCCCGGAGGCGGCATGTGACGAGCAGCCTCAG
CTGCCCGCGGGCACAGCGCTTTCAGTCCCGGGGCGCATGCTGCGGGGCGAGACTGTGCCATCCC
AGATTCCAGAGCTCCGGATCGGTTTGCGGAAGCGACTGCAGCGCTTTGGGGGAGACAGGCGATG
ACTGGGCGGGCGACTCCGCGCAGAGACGCGCGACCCTAAGGACATTCGCTCCCTGATCTCCGAG
CGGCGGGGACCACGGCACGCTGGCTTGGACACCCCGGGCGCTTCGGCAGGAGCGGAGGAGCTGC
GTGGGACGTTACCTGGAGCGCAGCTGCCCAGCATCTGTGTTCTGCTTAGAGGCCAAATAAATGA
CATTCAGAACTTCAGCTAAGGTACAGTAAGACTATGTCAGAGAGTCACAATGACCTTGCACAAT
AACAGTACAACCTTGCCTTTGTTTCCAAACATCAGCACCTCCTGGATACACAGCCCGTCAGAAG
CAGGGCTACCCCCAGGGACAGTCACTCATTTCGGCAGCTACAACATTTCACAAGCAGCTGGGAA
TTTCTCCTCCCTAAATGATACCACCAGTGACCCCTTAGGAGGTCATACCATCTGGCAAGTGGTC
TTTATCGCATTCTTAACGGGCTTCCTGGCCCTGGTGACCATCATCGGCAACATCTTAGTCATAG
TTGCATTTAAGGTCAACAAACAACTGAAGACAGTCAACAACTACTTCCTCCTAAGCCTGGCCTG
TGCTGATCTGATCATCGGGGTCATTTCCATGAATCTGTTTACTACCTACATCATCATGAACAGA
TGGGCTTTGGGGAACTTGGCCTGTGATCTCTGGCTTTCCATTGACTATGTGGCCAGCAATGCCT
CTGTCATGAACCTTCTGGTCATTAGCTTTGACAGGTACTTTTCCATCACACGGCCACTCACATA
CCGAGCCAAAAGAACAACAAAGAGAGCCGGTGTGATGATTGGTCTGGCTTGGGTCATCTCCTTT
GTCCTTTGGGCTCCTGCCATCTTGTTCTGGCAGTATTTTGTGGGAAAGCGGACTGTGCCTCCAG
GGGAGTGTTTCATTCAGTTTCTCAGTGAGCCTACTATCACCTTCGGCACGGCCATTGCCGCCTT
TTATATGCCTGTCACCATTATGACTATTTTGTACTGGAGAATCTATAAAGAAACTGAAAAACGT
ACCAAAGAGCTTGCTGGCCTGCAGGCCTCTGGGACAGAAGCAGAGACAGAAAACTTTGTCCACC
CCACAGGCAGTTCTCGAAGCTGCAGCAGCTATGAGCTGCAGCAGCAAAGCCTGAAGCACTCATC
CAGGAGAAAGTACGGCCGCTGCCACTTCTGGTTCACAACTAAGAGCTGGAAGCCCAGCGCTGAG
CAGATGGACCAAGACCACAGCAGCAGTGACAGCTGGAACAACAATGATGCTGCTGCTTCCCTGG
AAAACTCCGCCTCCTCCGATGAGGAGGACATTGGCTCAGAGACAAGAGCCATCTACTCTATTGT
GCTCAAGCTTCCAGGGCACAGCACCATCCTCAACTCCACCAAACTGCCCTCCTCTGACAACCTG
CAAGTACCTGAAGAAGATCTAGGGCCAGTGGACATGGAGAGAAATGCCAGTAAGCTTCAGACCC
AGAAGAGTATGGACGATGGTGGCAGTTTTCAAAAAAGCTTCTCCAAGCTTCCCATCCAGTTGGA
GTCCACCGTGGACACAGCCAAGACTTCTGATGCCAACTCCTCGGTGGGTAAGACCATGGCCACT
CTACCTCTGTCCTTCAAGGAAGCCACACTGGCCAAGAGGTTTGCTCTGAAGACCAGAAGTCAGA
TCACAAAGCGGAAGAGGATGTCCCTCATCAAGGAGAAGAAGGCAGCGCAGACCCTCAGTGCCAT
CTTACTCGCCTTTATCATCACGTGGACCCCCTACAACATCATGGTTCTGGTGAATACTTTTTGT
GACAGCTGCATACCCAAAACCTATTGGAATCTGGGCTACTGGCTGTGCTACATCAACAGCACCG
TGAACCCTGTGTGCTATGCGTTGTGCAACAAAACCTTCAGAAACACCTTCAAGATGCTACTGCT
GTGCCAGTGTGACAAGAGGAAGAGACGCAAGCAGCAGTACCAGCAAAGACAGTCTGTCATTTTC
CACAAGCGTGTGCCTGAGCAGGCCTTGTAGAAGGAGCTTTGATGCATAGCAGTGACAAAACGCA
CACATCAACCCACAGACCTTAGAAGGAATAAGGTGAGGGTGGGGGTGATTCCTGGTGGTGATAA
AAAAAAAAATTTTATCACCCACATATGAAAGAAGCTGCTTGTTTACTGACCCATTGAATAAACT
GATTTTAACATAAAAAGTAAAATACCAATTCAGCAAAAAAAAAAAAAGCCTACTACTGAATATA
AAGAAATTTATTCTGAAATAGACATTGTTTCTTTTTTTAAAAAAGAGGAAAAAAATATTGCTTC
ACAGCAAATTGATTTGCCCGGGTCTTTTAATTCCTGTTAGCTCTGGAATTGCAGATAAACCTAG
CCGGCCCGATTGTGCTGTTCTTCCCAAGGATTCCAAGTGCCGATCCAGACCACATGTGGAATAC
ATCAGGCTCATGAATCTGTGGTTCTGAAATTATGCCGTATGTTGCAAAGCTGAACCTTCTTGTC
CCAATAGAGCTTCCATCCTCTCTTTGGTGTGTTGTTGAACTCTATTTGTGGACTTGATTCCTGA
TTCTCGCAAAATATTGTGTTGTGAGTTGGTTTAGTACAAATAAAAATGCATAAGTA

hide sequence

RefSeq Acc Id:

XM_013504733 ⟹ XP_013360187

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955492	958,347 - 1,223,360 (-)	NCBI

Sequence:

show sequence

AGCAAAAGCTGCACATGCTTACCCACAGCTTTCCTGTTAGCCATTATCTCCATAAAAGAACGAA
TGACATGGAGCAGAGCAGCATCTGTGTTCTGCTTAGAGGCCAAATAAATGACATTCAGAACTTC
AGCTAAGGTACAGTAAGACTATGTCAGAGAGTCACAATGACCTTGCACAATAACAGTACAACCT
TGCCTTTGTTTCCAAACATCAGCACCTCCTGGATACACAGCCCGTCAGAAGCAGGGCTACCCCC
AGGGACAGTCACTCATTTCGGCAGCTACAACATTTCACAAGCAGCTGGGAATTTCTCCTCCCTA
AATGATACCACCAGTGACCCCTTAGGAGGTCATACCATCTGGCAAGTGGTCTTTATCGCATTCT
TAACGGGCTTCCTGGCCCTGGTGACCATCATCGGCAACATCTTAGTCATAGTTGCATTTAAGGT
CAACAAACAACTGAAGACAGTCAACAACTACTTCCTCCTAAGCCTGGCCTGTGCTGATCTGATC
ATCGGGGTCATTTCCATGAATCTGTTTACTACCTACATCATCATGAACAGATGGGCTTTGGGGA
ACTTGGCCTGTGATCTCTGGCTTTCCATTGACTATGTGGCCAGCAATGCCTCTGTCATGAACCT
TCTGGTCATTAGCTTTGACAGGTACTTTTCCATCACACGGCCACTCACATACCGAGCCAAAAGA
ACAACAAAGAGAGCCGGTGTGATGATTGGTCTGGCTTGGGTCATCTCCTTTGTCCTTTGGGCTC
CTGCCATCTTGTTCTGGCAGTATTTTGTGGGAAAGCGGACTGTGCCTCCAGGGGAGTGTTTCAT
TCAGTTTCTCAGTGAGCCTACTATCACCTTCGGCACGGCCATTGCCGCCTTTTATATGCCTGTC
ACCATTATGACTATTTTGTACTGGAGAATCTATAAAGAAACTGAAAAACGTACCAAAGAGCTTG
CTGGCCTGCAGGCCTCTGGGACAGAAGCAGAGACAGAAAACTTTGTCCACCCCACAGGCAGTTC
TCGAAGCTGCAGCAGCTATGAGCTGCAGCAGCAAAGCCTGAAGCACTCATCCAGGAGAAAGTAC
GGCCGCTGCCACTTCTGGTTCACAACTAAGAGCTGGAAGCCCAGCGCTGAGCAGATGGACCAAG
ACCACAGCAGCAGTGACAGCTGGAACAACAATGATGCTGCTGCTTCCCTGGAAAACTCCGCCTC
CTCCGATGAGGAGGACATTGGCTCAGAGACAAGAGCCATCTACTCTATTGTGCTCAAGCTTCCA
GGGCACAGCACCATCCTCAACTCCACCAAACTGCCCTCCTCTGACAACCTGCAAGTACCTGAAG
AAGATCTAGGGCCAGTGGACATGGAGAGAAATGCCAGTAAGCTTCAGACCCAGAAGAGTATGGA
CGATGGTGGCAGTTTTCAAAAAAGCTTCTCCAAGCTTCCCATCCAGTTGGAGTCCACCGTGGAC
ACAGCCAAGACTTCTGATGCCAACTCCTCGGTGGGTAAGACCATGGCCACTCTACCTCTGTCCT
TCAAGGAAGCCACACTGGCCAAGAGGTTTGCTCTGAAGACCAGAAGTCAGATCACAAAGCGGAA
GAGGATGTCCCTCATCAAGGAGAAGAAGGCAGCGCAGACCCTCAGTGCCATCTTACTCGCCTTT
ATCATCACGTGGACCCCCTACAACATCATGGTTCTGGTGAATACTTTTTGTGACAGCTGCATAC
CCAAAACCTATTGGAATCTGGGCTACTGGCTGTGCTACATCAACAGCACCGTGAACCCTGTGTG
CTATGCGTTGTGCAACAAAACCTTCAGAAACACCTTCAAGATGCTACTGCTGTGCCAGTGTGAC
AAGAGGAAGAGACGCAAGCAGCAGTACCAGCAAAGACAGTCTGTCATTTTCCACAAGCGTGTGC
CTGAGCAGGCCTTGTAGAAGGAGCTTTGATGCATAGCAGTGACAAAACGCACACATCAACCCAC
AGACCTTAGAAGGAATAAGGTGAGGGTGGGGGTGATTCCTGGTGGTGATAAAAAAAAAAATTTT
ATCACCCACATATGAAAGAAGCTGCTTGTTTACTGACCCATTGAATAAACTGATTTTAACATAA
AAAGTAAAATACCAATTCAGCAAAAAAAAAAAAAGCCTACTACTGAATATAAAGAAATTTATTC
TGAAATAGACATTGTTTCTTTTTTTAAAAAAGAGGAAAAAAATATTGCTTCACAGCAAATTGAT
TTGCCCGGGTCTTTTAATTCCTGTTAGCTCTGGAATTGCAGATAAACCTAGCCGGCCCGATTGT
GCTGTTCTTCCCAAGGATTCCAAGTGCCGATCCAGACCACATGTGGAATACATCAGGCTCATGA
ATCTGTGGTTCTGAAATTATGCCGTATGTTGCAAAGCTGAACCTTCTTGTCCCAATAGAGCTTC
CATCCTCTCTTTGGTGTGTTGTTGAACTCTATTTGTGGACTTGATTCCTGATTCTCGCAAAATA
TTGTGTTGTGAGTTGGTTTAGTACAAATAAAAATGCATAAGTA

hide sequence

RefSeq Acc Id:

XM_013504734 ⟹ XP_013360188

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955492	958,347 - 1,150,397 (-)	NCBI

Sequence:

show sequence

GCAATTGGTAGCAAACAATGCATCTTTCCTAAGACTATGTCAGAGAGTCACAATGACCTTGCAC
AATAACAGTACAACCTTGCCTTTGTTTCCAAACATCAGCACCTCCTGGATACACAGCCCGTCAG
AAGCAGGGCTACCCCCAGGGACAGTCACTCATTTCGGCAGCTACAACATTTCACAAGCAGCTGG
GAATTTCTCCTCCCTAAATGATACCACCAGTGACCCCTTAGGAGGTCATACCATCTGGCAAGTG
GTCTTTATCGCATTCTTAACGGGCTTCCTGGCCCTGGTGACCATCATCGGCAACATCTTAGTCA
TAGTTGCATTTAAGGTCAACAAACAACTGAAGACAGTCAACAACTACTTCCTCCTAAGCCTGGC
CTGTGCTGATCTGATCATCGGGGTCATTTCCATGAATCTGTTTACTACCTACATCATCATGAAC
AGATGGGCTTTGGGGAACTTGGCCTGTGATCTCTGGCTTTCCATTGACTATGTGGCCAGCAATG
CCTCTGTCATGAACCTTCTGGTCATTAGCTTTGACAGGTACTTTTCCATCACACGGCCACTCAC
ATACCGAGCCAAAAGAACAACAAAGAGAGCCGGTGTGATGATTGGTCTGGCTTGGGTCATCTCC
TTTGTCCTTTGGGCTCCTGCCATCTTGTTCTGGCAGTATTTTGTGGGAAAGCGGACTGTGCCTC
CAGGGGAGTGTTTCATTCAGTTTCTCAGTGAGCCTACTATCACCTTCGGCACGGCCATTGCCGC
CTTTTATATGCCTGTCACCATTATGACTATTTTGTACTGGAGAATCTATAAAGAAACTGAAAAA
CGTACCAAAGAGCTTGCTGGCCTGCAGGCCTCTGGGACAGAAGCAGAGACAGAAAACTTTGTCC
ACCCCACAGGCAGTTCTCGAAGCTGCAGCAGCTATGAGCTGCAGCAGCAAAGCCTGAAGCACTC
ATCCAGGAGAAAGTACGGCCGCTGCCACTTCTGGTTCACAACTAAGAGCTGGAAGCCCAGCGCT
GAGCAGATGGACCAAGACCACAGCAGCAGTGACAGCTGGAACAACAATGATGCTGCTGCTTCCC
TGGAAAACTCCGCCTCCTCCGATGAGGAGGACATTGGCTCAGAGACAAGAGCCATCTACTCTAT
TGTGCTCAAGCTTCCAGGGCACAGCACCATCCTCAACTCCACCAAACTGCCCTCCTCTGACAAC
CTGCAAGTACCTGAAGAAGATCTAGGGCCAGTGGACATGGAGAGAAATGCCAGTAAGCTTCAGA
CCCAGAAGAGTATGGACGATGGTGGCAGTTTTCAAAAAAGCTTCTCCAAGCTTCCCATCCAGTT
GGAGTCCACCGTGGACACAGCCAAGACTTCTGATGCCAACTCCTCGGTGGGTAAGACCATGGCC
ACTCTACCTCTGTCCTTCAAGGAAGCCACACTGGCCAAGAGGTTTGCTCTGAAGACCAGAAGTC
AGATCACAAAGCGGAAGAGGATGTCCCTCATCAAGGAGAAGAAGGCAGCGCAGACCCTCAGTGC
CATCTTACTCGCCTTTATCATCACGTGGACCCCCTACAACATCATGGTTCTGGTGAATACTTTT
TGTGACAGCTGCATACCCAAAACCTATTGGAATCTGGGCTACTGGCTGTGCTACATCAACAGCA
CCGTGAACCCTGTGTGCTATGCGTTGTGCAACAAAACCTTCAGAAACACCTTCAAGATGCTACT
GCTGTGCCAGTGTGACAAGAGGAAGAGACGCAAGCAGCAGTACCAGCAAAGACAGTCTGTCATT
TTCCACAAGCGTGTGCCTGAGCAGGCCTTGTAGAAGGAGCTTTGATGCATAGCAGTGACAAAAC
GCACACATCAACCCACAGACCTTAGAAGGAATAAGGTGAGGGTGGGGGTGATTCCTGGTGGTGA
TAAAAAAAAAAATTTTATCACCCACATATGAAAGAAGCTGCTTGTTTACTGACCCATTGAATAA
ACTGATTTTAACATAAAAAGTAAAATACCAATTCAGCAAAAAAAAAAAAAGCCTACTACTGAAT
ATAAAGAAATTTATTCTGAAATAGACATTGTTTCTTTTTTTAAAAAAGAGGAAAAAAATATTGC
TTCACAGCAAATTGATTTGCCCGGGTCTTTTAATTCCTGTTAGCTCTGGAATTGCAGATAAACC
TAGCCGGCCCGATTGTGCTGTTCTTCCCAAGGATTCCAAGTGCCGATCCAGACCACATGTGGAA
TACATCAGGCTCATGAATCTGTGGTTCTGAAATTATGCCGTATGTTGCAAAGCTGAACCTTCTT
GTCCCAATAGAGCTTCCATCCTCTCTTTGGTGTGTTGTTGAACTCTATTTGTGGACTTGATTCC
TGATTCTCGCAAAATATTGTGTTGTGAGTTGGTTTAGTACAAATAAAAATGCATAAGTA

hide sequence

RefSeq Acc Id:

XR_001231254

Type:

NON-CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955492	1,150,406 - 1,429,832 (-)	NCBI

Sequence:

show sequence

GCAGGAGGAGGAAAGAGAGGAGGAACGGGCCAGCTGTAGCCACGACCGCCACCACCAGGCAGAG
GAAGGGCTCCTGGGAAGGAAAAGACCCTCCTCCCCTTTGGAGCCCCTTCTGTATGCTTCTGCAG
GGGGAAAAAAAGGAATACAAGATCAAGGAGACGAAAAGAAGGGTGGAAAAGTGAGAGGGCAGAC
AGAAAGAGAAAGAGGGGGAAAAAGGCTTGGACAGAAAGAGTCAGGACGTGCGTGGTGCCAAGGC
GCTGCTCCCCTTGGGCAGGTGGCGTGGCCGCTGCCCGGAGGCGGCATGTGACGAGCAGCCTCAG
CTGCCCGCGGGCACAGCGCTTTCAGTCCCGGGGCGCATGCTGCGGGGCGAGACTGTGCCATCCC
AGATTCCAGAGCTCCGGATCGGTTTGCGGAAGCGACTGCAGCGCTTTGGGGGAGACAGGCGATG
ACTGGGCGGGCGACTCCGCGCAGAGACGCGCGACCCTAAGGACATTCGCTCCCTGATCTCCGAG
CGGCGGGGACCACGGCACGCTGGCTTGGACACCCCGGGCGCTTCGGCAGGAGCGGAGGAGCTGC
GTGGGACGTTACCTGGAGCGCAGCTGCCCAGATATGAACAGTAATGGCCTCTGTCTCACTTCTG
AGTTCCTTGGTACACTGTGGGCTGAATGAACTGTACCCATCTCCATCATGATATGCAACACCAA
GTCTTGTCACTACATCTGTGTTCTGCTTAGAGGCCAAATAAATGACATTCAGAACTTCAGCTAA
GGTACAGTAAGATTCTCATGAGTAAATTTGCAGGGGAATCATAAAGAAGAATAGACTTTGTTTG
TAAAG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005404981	(Get FASTA)	NCBI Sequence Viewer
	XP_013360184	(Get FASTA)	NCBI Sequence Viewer
	XP_013360185	(Get FASTA)	NCBI Sequence Viewer
	XP_013360186	(Get FASTA)	NCBI Sequence Viewer
	XP_013360187	(Get FASTA)	NCBI Sequence Viewer
	XP_013360188	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000025670
	ENSCLAP00000025670.1

RefSeq Acc Id:

XP_005404981 ⟸ XM_005404924

- UniProtKB:

A0A8C2W8L4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTLHNNSTTLPLFPNISTSWIHSPSEAGLPPGTVTHFGSYNISQAAGNFSSLNDTTSDPLGGHT
IWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTY
IIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLA
WVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYK
ETEKRTKELAGLQASGTEAETENFVHPTGSSRSCSSYELQQQSLKHSSRRKYGRCHFWFTTKSW
KPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLP
SSDNLQVPEEDLGPVDMERNASKLQTQKSMDDGGSFQKSFSKLPIQLESTVDTAKTSDANSSVG
KTMATLPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVL
VNTFCDSCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRNTFKMLLLCQCDKRKRRKQQYQQR
QSVIFHKRVPEQAL

hide sequence

RefSeq Acc Id:

XP_013360186 ⟸ XM_013504732

- UniProtKB:

A0A8C2W8L4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTLHNNSTTLPLFPNISTSWIHSPSEAGLPPGTVTHFGSYNISQAAGNFSSLNDTTSDPLGGHT
IWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTY
IIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLA
WVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYK
ETEKRTKELAGLQASGTEAETENFVHPTGSSRSCSSYELQQQSLKHSSRRKYGRCHFWFTTKSW
KPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLP
SSDNLQVPEEDLGPVDMERNASKLQTQKSMDDGGSFQKSFSKLPIQLESTVDTAKTSDANSSVG
KTMATLPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVL
VNTFCDSCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRNTFKMLLLCQCDKRKRRKQQYQQR
QSVIFHKRVPEQAL

hide sequence

RefSeq Acc Id:

XP_013360184 ⟸ XM_013504730

- UniProtKB:

A0A8C2W8L4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTLHNNSTTLPLFPNISTSWIHSPSEAGLPPGTVTHFGSYNISQAAGNFSSLNDTTSDPLGGHT
IWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTY
IIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLA
WVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYK
ETEKRTKELAGLQASGTEAETENFVHPTGSSRSCSSYELQQQSLKHSSRRKYGRCHFWFTTKSW
KPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLP
SSDNLQVPEEDLGPVDMERNASKLQTQKSMDDGGSFQKSFSKLPIQLESTVDTAKTSDANSSVG
KTMATLPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVL
VNTFCDSCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRNTFKMLLLCQCDKRKRRKQQYQQR
QSVIFHKRVPEQAL

hide sequence

RefSeq Acc Id:

XP_013360185 ⟸ XM_013504731

- UniProtKB:

A0A8C2W8L4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTLHNNSTTLPLFPNISTSWIHSPSEAGLPPGTVTHFGSYNISQAAGNFSSLNDTTSDPLGGHT
IWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTY
IIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLA
WVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYK
ETEKRTKELAGLQASGTEAETENFVHPTGSSRSCSSYELQQQSLKHSSRRKYGRCHFWFTTKSW
KPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLP
SSDNLQVPEEDLGPVDMERNASKLQTQKSMDDGGSFQKSFSKLPIQLESTVDTAKTSDANSSVG
KTMATLPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVL
VNTFCDSCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRNTFKMLLLCQCDKRKRRKQQYQQR
QSVIFHKRVPEQAL

hide sequence

RefSeq Acc Id:

XP_013360187 ⟸ XM_013504733

- UniProtKB:

A0A8C2W8L4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTLHNNSTTLPLFPNISTSWIHSPSEAGLPPGTVTHFGSYNISQAAGNFSSLNDTTSDPLGGHT
IWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTY
IIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLA
WVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYK
ETEKRTKELAGLQASGTEAETENFVHPTGSSRSCSSYELQQQSLKHSSRRKYGRCHFWFTTKSW
KPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLP
SSDNLQVPEEDLGPVDMERNASKLQTQKSMDDGGSFQKSFSKLPIQLESTVDTAKTSDANSSVG
KTMATLPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVL
VNTFCDSCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRNTFKMLLLCQCDKRKRRKQQYQQR
QSVIFHKRVPEQAL

hide sequence

RefSeq Acc Id:

XP_013360188 ⟸ XM_013504734

- UniProtKB:

A0A8C2W8L4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTLHNNSTTLPLFPNISTSWIHSPSEAGLPPGTVTHFGSYNISQAAGNFSSLNDTTSDPLGGHT
IWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTY
IIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLA
WVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYK
ETEKRTKELAGLQASGTEAETENFVHPTGSSRSCSSYELQQQSLKHSSRRKYGRCHFWFTTKSW
KPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLP
SSDNLQVPEEDLGPVDMERNASKLQTQKSMDDGGSFQKSFSKLPIQLESTVDTAKTSDANSSVG
KTMATLPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVL
VNTFCDSCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRNTFKMLLLCQCDKRKRRKQQYQQR
QSVIFHKRVPEQAL

hide sequence

Ensembl Acc Id:

ENSCLAP00000025670 ⟸ ENSCLAT00000025960

Protein Domains

G-protein coupled receptors family 1 profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000017786	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000025960	ENTREZGENE
	ENSCLAT00000025960.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	Musac_Ach_M3_rcpt	UniProtKB/TrEMBL
	Musac_Ach_rcpt	UniProtKB/TrEMBL
NCBI Gene	Chrm3	ENTREZGENE
PANTHER	5-HYDROXYTRYPTAMINE RECEPTOR	UniProtKB/TrEMBL
	MUSCARINIC ACETYLCHOLINE RECEPTOR M3	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	MUSCARINICR	UniProtKB/TrEMBL
	MUSCRINICM3R	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
SMART	7TM_GPCR_Srsx	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A8C2W8L4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Chrm3	cholinergic receptor muscarinic 3		cholinergic receptor, muscarinic 3	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - SMPDB