LOC102552707 (uncharacterized LOC102552707) - Rat Genome Database

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Gene: LOC102552707 (uncharacterized LOC102552707) Rattus norvegicus
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Symbol: LOC102552707
Name: uncharacterized LOC102552707
RGD ID: 7738973
Description:
Type: ncrna
RefSeq Status: MODEL
Previously known as: LOC103694252; uncharacterized LOC103694252
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81879,098,300 - 79,150,784 (+)NCBIGRCr8
mRatBN7.21876,823,677 - 76,880,809 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01880,329,287 - 80,347,482 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01879,389,995 - 79,408,646 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1875,452,029 - 75,505,909 (+)NCBICelera
Cytogenetic Map18q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in LOC102552707
395 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
2303584Gluco55Glucose level QTL 552blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)184852004483828827Rat
61384Bp48Blood pressure QTL 4819.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186062231177209844Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1298072Cia26Collagen induced arthritis QTL 263.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)185470976983828827Rat
6903353Bp353Blood pressure QTL 3532.8arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)185979647883828827Rat
738008Hcar14Hepatocarcinoma resistance QTL 144.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion number (CMO:0001462)185146473383218561Rat
634333Pia19Pristane induced arthritis QTL 193.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)187399714079532029Rat
6903356Bp354Blood pressure QTL 3544.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185979647883828827Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183587072380870723Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184334502283828827Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184664067583828827Rat
70172Eae15Experimental allergic encephalomyelitis QTL 150.001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)187647781477209844Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183139332077209694Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184664067583828827Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184664067583828827Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
2303571Bw92Body weight QTL 923body mass (VT:0001259)body weight (CMO:0000012)184852004483828827Rat
631675Iddm15Insulin dependent diabetes mellitus QTL 15urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)186062231177209844Rat
1598826Anxrr20Anxiety related response QTL 203.04body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)184143297183828827Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183135940883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
724542Kidm2Kidney mass QTL 22.6kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)185917211583828827Rat
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)183819245583192455Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat


Expression


Sequence


RefSeq Acc Id: XR_005496258
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81879,098,340 - 79,150,784 (+)NCBI
mRatBN7.21876,823,681 - 76,880,809 (+)NCBI
RefSeq Acc Id: XR_005496259
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81879,098,340 - 79,150,784 (+)NCBI
mRatBN7.21876,823,677 - 76,880,809 (+)NCBI
RefSeq Acc Id: XR_005496260
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81879,098,300 - 79,150,784 (+)NCBI
mRatBN7.21876,823,679 - 76,880,809 (+)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-6761 BioCyc
NCBI Gene LOC102552707 ENTREZGENE
PhenoGen LOC102552707 PhenoGen
RNAcentral URS0000CCEC2F RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 LOC102552707  uncharacterized LOC102552707  LOC103694252  uncharacterized LOC103694252  Data merged from RGD:9293028 737654 PROVISIONAL
2014-08-25 LOC103694252  uncharacterized LOC103694252      Symbol and Name status set to provisional 70820 PROVISIONAL
2013-12-18 LOC102552707  uncharacterized LOC102552707      Symbol and Name status set to provisional 70820 PROVISIONAL