LOC102551809 (uncharacterized LOC102551809) - Rat Genome Database

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Gene: LOC102551809 (uncharacterized LOC102551809) Rattus norvegicus
Analyze
Symbol: LOC102551809
Name: uncharacterized LOC102551809
RGD ID: 7670702
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81812,197,403 - 12,204,844 (+)NCBIGRCr8
mRatBN7.21811,922,708 - 11,928,930 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01815,555,017 - 15,558,435 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01815,329,380 - 15,332,591 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC102551809
19 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125758124Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125758124Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor surface area measurement (CMO:0002078)18224947722066430Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)18224947722066430Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
11565454Kidm59Kidney mass QTL 590.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)18679125112205285Rat
12904714Cm131Cardiac mass QTL 1310.002heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)18679125112205285Rat
12904715Cm132Cardiac mass QTL 1320.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)18679125112205285Rat
12904716Am21Aortic mass QTL 210.005aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)18679125112205285Rat
2301409Cm70Cardiac mass QTL 700.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)18679125112205285Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat


Expression


Sequence


RefSeq Acc Id: XR_005496211
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81812,197,403 - 12,204,844 (+)NCBI
mRatBN7.21811,922,708 - 11,928,930 (+)NCBI
RefSeq Acc Id: XR_005496212
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81812,197,412 - 12,204,844 (+)NCBI
mRatBN7.21811,922,711 - 11,928,930 (+)NCBI
RefSeq Acc Id: XR_010059781
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81812,197,407 - 12,204,844 (+)NCBI
RefSeq Acc Id: XR_361255
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81812,197,409 - 12,204,844 (+)NCBI
mRatBN7.21811,922,710 - 11,928,930 (+)NCBI
Rnor_6.01815,555,017 - 15,558,435 (-)NCBI
Rnor_5.01815,329,380 - 15,332,591 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-8223 BioCyc
NCBI Gene LOC102551809 ENTREZGENE
PhenoGen LOC102551809 PhenoGen
RNAcentral URS0000CCF8AA RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102551809  uncharacterized LOC102551809      Symbol and Name status set to provisional 70820 PROVISIONAL