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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Synaptotagmin 11 interacts with components of the RNA-induced silencing complex RISC in clonal pancreatic beta-cells. | Milochau A, etal., FEBS Lett. 2014 Jun 27;588(14):2217-22. doi: 10.1016/j.febslet.2014.05.031. Epub 2014 May 29. |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
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Variants in Cbr1l2
9 total Variants ![]() |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_001432610 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001432611 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001432612 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001432613 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001432614 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001432615 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006248109 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AF023086 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AF181957 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000011 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000042283 ⟹ ENSRNOP00000043385 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000072384 ⟹ ENSRNOP00000064050 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000075105 ⟹ ENSRNOP00000081570 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000075985 ⟹ ENSRNOP00000067964 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000085961 ⟹ ENSRNOP00000073686 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000096883 ⟹ ENSRNOP00000077145 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000114595 ⟹ ENSRNOP00000082202 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_006248109 ⟹ XP_006248171 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001419539 | (Get FASTA) | NCBI Sequence Viewer |
NP_001419540 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001419541 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001419542 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001419543 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001419544 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006248171 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAB81080 | (Get FASTA) | NCBI Sequence Viewer |
AAF03396 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000064050.2 | ||
ENSRNOP00000067964.2 | |||
ENSRNOP00000073686.2 | |||
ENSRNOP00000077145.1 | |||
ENSRNOP00000081570.1 | |||
ENSRNOP00000082202.1 |
RefSeq Acc Id: | XP_006248171 ⟸ XM_006248109 |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000073686 ⟸ ENSRNOT00000085961 |
Ensembl Acc Id: | ENSRNOP00000064050 ⟸ ENSRNOT00000072384 |
Ensembl Acc Id: | ENSRNOP00000067964 ⟸ ENSRNOT00000075985 |
Ensembl Acc Id: | ENSRNOP00000077145 ⟸ ENSRNOT00000096883 |
Ensembl Acc Id: | ENSRNOP00000043385 ⟸ ENSRNOT00000042283 |
Ensembl Acc Id: | ENSRNOP00000082202 ⟸ ENSRNOT00000114595 |
Ensembl Acc Id: | ENSRNOP00000081570 ⟸ ENSRNOT00000075105 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-A0A0G2K658-F1-model_v2 | AlphaFold | A0A0G2K658 | 1-329 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13698074 | ||||||||
Promoter ID: | EPDNEW_R8597 | ||||||||
Type: | initiation region | ||||||||
Name: | LOC102556347_1 | ||||||||
Description: | carbonyl reductase | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:7631561 | AgrOrtholog |
BioCyc Gene | G2FUF-21807 | BioCyc |
Ensembl Genes | ENSRNOG00000049911 | Ensembl, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000072384.3 | UniProtKB/TrEMBL |
ENSRNOT00000075105.3 | UniProtKB/TrEMBL | |
ENSRNOT00000075985.2 | UniProtKB/TrEMBL | |
ENSRNOT00000085961.2 | UniProtKB/TrEMBL | |
ENSRNOT00000096883.1 | UniProtKB/TrEMBL | |
ENSRNOT00000114595.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | NAD(P)-binding Rossmann-like Domain | UniProtKB/TrEMBL |
InterPro | CBR1-like | UniProtKB/TrEMBL |
Glc/ribitol_DH | UniProtKB/TrEMBL | |
NAD(P)-bd_dom_sf | UniProtKB/TrEMBL | |
Sc_DH/Rdtase_CS | UniProtKB/TrEMBL | |
NCBI Gene | LOC102556347 | ENTREZGENE |
PANTHER | CARBONYL REDUCTASE 1-RELATED | UniProtKB/TrEMBL |
CARBONYL REDUCTASE [NADPH] 1 | UniProtKB/TrEMBL | |
Pfam | adh_short | UniProtKB/TrEMBL |
PhenoGen | Cbr1l2 | PhenoGen |
PRINTS | GDHRDH | UniProtKB/TrEMBL |
SDRFAMILY | UniProtKB/TrEMBL | |
PROSITE | ADH_SHORT | UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000049911 | RatGTEx |
Superfamily-SCOP | SSF51735 | UniProtKB/TrEMBL |
UniProt | A0A096MJ24_RAT | UniProtKB/TrEMBL |
A0A0G2K658_RAT | UniProtKB/TrEMBL | |
A0A8I5XVU2_RAT | UniProtKB/TrEMBL | |
A0A8I5ZT21_RAT | UniProtKB/TrEMBL | |
A0A8I5ZUP5 | ENTREZGENE, UniProtKB/TrEMBL | |
M0R3X6 | ENTREZGENE, UniProtKB/TrEMBL | |
O08558 | ENTREZGENE | |
P47727 | ENTREZGENE | |
Q3KR58 | ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2022-10-18 | Cbr1l2 | carbonyl reductase 1 like 2 | LOC102556347 | carbonyl reductase [NADPH] 1-like | Name and Symbol changed | 629549 | APPROVED |
2013-12-18 | LOC102556347 | carbonyl reductase [NADPH] 1-like | Symbol and Name status set to provisional | 70820 | PROVISIONAL |