Pygm (muscle glycogen phosphorylase) - Rat Genome Database

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Gene: Pygm (muscle glycogen phosphorylase) Mus musculus
Analyze
Symbol: Pygm
Name: muscle glycogen phosphorylase
RGD ID: 737330
MGI Page MGI
Description: Enables glycogen phosphorylase activity. Acts upstream of or within glycogen catabolic process. Predicted to be located in Z disc and sarcoplasmic reticulum. Predicted to be active in cytoplasm. Is expressed in several structures, including cerebral cortex; diaphragm; eye; heart and pericardium; and skeletal muscle. Used to study glycogen storage disease V. Human ortholog(s) of this gene implicated in glycogen storage disease V. Orthologous to human PYGM (glycogen phosphorylase, muscle associated).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: AI115133; glycogen phosphorylase, muscle form; myophosphorylase; P; PG
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39196,434,438 - 6,448,494 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl196,434,429 - 6,448,489 (+)EnsemblGRCm39 Ensembl
GRCm38196,384,408 - 6,398,464 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl196,384,399 - 6,398,459 (+)EnsemblGRCm38mm10GRCm38
MGSCv37196,384,429 - 6,398,459 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36196,384,429 - 6,398,459 (+)NCBIMGSCv36mm8
Celera196,257,446 - 6,271,476 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4,6-tribromophenol  (ISO)
2,5-hexanedione  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
alpha-Zearalanol  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (EXP)
astemizole  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bromobenzene  (ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
cantharidin  (EXP)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
corosolic acid  (ISO)
daunorubicin  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (EXP)
disodium selenite  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
endosulfan  (ISO)
ethanol  (EXP)
etoposide  (ISO)
fenvalerate  (ISO)
genistein  (ISO)
gentamycin  (ISO)
haloperidol  (ISO)
ketamine  (ISO)
lead diacetate  (ISO)
Licochalcone B  (ISO)
mercury dibromide  (ISO)
mitoxantrone  (ISO)
ochratoxin A  (ISO)
ozone  (ISO)
paraquat  (ISO)
PCB138  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
pioglitazone  (EXP)
potassium chromate  (ISO)
prednisone  (ISO)
progesterone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sodium fluoride  (ISO)
sodium nitrate  (EXP)
Soman  (ISO)
streptozocin  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
Theaflavin 3,3'-digallate  (ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (EXP)
triptonide  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Structural relationships among regulated and unregulated phosphorylases. Buchbinder JL, etal., Annu Rev Biophys Biomol Struct. 2001;30:191-209.
2. Alteration of glycogen and glucose metabolism in ischaemic and post-ischaemic working rat hearts by adenosine A1 receptor stimulation. Fraser H, etal., Br J Pharmacol. 1999 Sep;128(1):197-205.
3. The content of glycogen phosphorylase and glycogen in preparations of sarcoplasmic reticulum-glycogenolytic complex is enhanced in diabetic rat skeletal muscle. Garduno E, etal., Diabetologia. 2001 Oct;44(10):1238-46.
4. Localization of the muscle, liver, and brain glycogen phosphorylase genes on linkage maps of mouse chromosomes 19, 12, and 2, respectively. Glaser T, etal., Genomics 1989 Oct;5(3):510-21.
5. Botulinum-induced muscle paralysis alters metabolic gene expression and fatigue recovery. Gorin F, etal., Am J Physiol. 1996 Jan;270(1 Pt 2):R238-45.
6. Glycogen phosphorylase: control by phosphorylation and allosteric effectors. Johnson LN FASEB J. 1992 Mar;6(6):2274-82.
7. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
8. Molecular diagnosis of McArdle disease: revised genomic structure of the myophosphorylase gene and identification of a novel mutation. Kubisch C, etal., Hum Mutat. 1998;12(1):27-32.
9. Gene discovery by microarray: identification of novel genes induced during growth factor-mediated muscle cell survival and differentiation. Kuninger D, etal., Genomics 2004 Nov;84(5):876-89.
10. Hepatic and skeletal muscle glycogen metabolism in rats with short-term cholestasis. Lang C, etal., J Hepatol. 2002 Jan;36(1):22-9.
11. Gene expression profile of cardiomyocytes in hypertrophic heart induced by continuous norepinephrine infusion in the rats. Li P, etal., Cell Mol Life Sci. 2003 Oct;60(10):2200-9.
12. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
13. MGDs mouse GO annotations MGD data from the GO Consortium
14. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
15. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
16. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
17. Mouse MP Annotation Import Pipeline RGD automated import pipeline
18. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
19. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
20. Glycogen-binding protein components of rat tissues. Satoh K and Sato K, Biochem Biophys Res Commun. 1980 Sep 16;96(1):28-33.
Additional References at PubMed
PMID:1572647   PMID:7749225   PMID:7873877   PMID:8666395   PMID:8889548   PMID:9680388   PMID:10318868   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11785984   PMID:12477932  
PMID:14610273   PMID:14681479   PMID:15282316   PMID:15489334   PMID:16110338   PMID:16141072   PMID:16141073   PMID:17309103   PMID:17689562   PMID:21267068   PMID:21677750   PMID:21873635  
PMID:22730558   PMID:22794259   PMID:23341629   PMID:24269889   PMID:24275123   PMID:25130497   PMID:25762569   PMID:25873271   PMID:26075897   PMID:27156240   PMID:27215380   PMID:27280431  
PMID:28378742   PMID:28634551   PMID:29518331   PMID:29669786   PMID:30068389   PMID:30914683   PMID:30926747   PMID:31511858   PMID:31848135   PMID:32325033   PMID:32798765   PMID:36293380  
PMID:36370371   PMID:36455789   PMID:36604605   PMID:37537141   PMID:37998373   PMID:38355793  


Genomics

Comparative Map Data
Pygm
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39196,434,438 - 6,448,494 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl196,434,429 - 6,448,489 (+)EnsemblGRCm39 Ensembl
GRCm38196,384,408 - 6,398,464 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl196,384,399 - 6,398,459 (+)EnsemblGRCm38mm10GRCm38
MGSCv37196,384,429 - 6,398,459 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36196,384,429 - 6,398,459 (+)NCBIMGSCv36mm8
Celera196,257,446 - 6,271,476 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.53NCBI
PYGM
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381164,746,389 - 64,760,715 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1164,746,389 - 64,759,974 (-)EnsemblGRCh38hg38GRCh38
GRCh371164,513,861 - 64,528,187 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361164,270,606 - 64,284,763 (-)NCBINCBI36Build 36hg18NCBI36
Build 341164,270,605 - 64,284,763NCBI
Celera1161,840,305 - 61,854,685 (-)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1160,840,630 - 60,855,032 (-)NCBIHuRef
CHM1_11164,397,556 - 64,411,957 (-)NCBICHM1_1
T2T-CHM13v2.01164,739,618 - 64,754,020 (-)NCBIT2T-CHM13v2.0
Pygm
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81213,119,805 - 213,134,622 (+)NCBIGRCr8
mRatBN7.21203,690,550 - 203,705,369 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1203,690,533 - 203,705,368 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1212,039,387 - 212,054,202 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01219,135,880 - 219,150,695 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01211,826,933 - 211,841,748 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01221,756,325 - 221,771,142 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,756,286 - 221,771,143 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01228,737,461 - 228,758,937 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41209,166,701 - 209,181,588 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11209,325,179 - 209,340,017 (+)NCBI
Celera1201,223,967 - 201,238,784 (+)NCBICelera
Cytogenetic Map1q43NCBI
Pygm
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542220,411,480 - 20,424,931 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542220,411,480 - 20,424,676 (+)NCBIChiLan1.0ChiLan1.0
PYGM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2965,972,186 - 65,987,376 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11167,015,183 - 67,028,876 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01160,101,810 - 60,115,813 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11163,443,609 - 63,457,012 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1163,443,609 - 63,457,430 (-)Ensemblpanpan1.1panPan2
PYGM
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11852,398,192 - 52,410,731 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1852,398,056 - 52,410,464 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1851,005,808 - 51,018,059 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01853,439,715 - 53,451,957 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1853,439,257 - 53,451,957 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11852,534,631 - 52,546,873 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01852,120,553 - 52,132,799 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01852,904,684 - 52,916,934 (+)NCBIUU_Cfam_GSD_1.0
Pygm
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049478,108,815 - 8,121,764 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365994,551,032 - 4,564,154 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365994,551,164 - 4,564,109 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PYGM
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl27,409,116 - 7,421,254 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.127,409,330 - 7,421,256 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.226,540,079 - 6,553,856 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PYGM
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.119,474,539 - 9,490,612 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl19,475,622 - 9,491,500 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038106,864,368 - 106,879,692 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pygm
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476721,626,740 - 21,640,161 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476721,626,740 - 21,639,963 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:570
Count of miRNA genes:257
Interacting mature miRNAs:284
Transcripts:ENSMUST00000035269, ENSMUST00000113483, ENSMUST00000139775, ENSMUST00000142755
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142302Nstr1_mnerve sheath tumor resistance QTL 1 (mouse)Not determined19122371338Mouse
1301271Datd_mdopamine transporter density (mouse)Not determined19132340234Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
25394536Skmw86_mskeletal muscle weight 86, TA (mouse)1950648178957825Mouse
4142161Drinksac2_mdrink saccharin 2 (mouse)Not determined120695286Mouse
1357819Tgct2_mtesticular germ cell tumor 2 (mouse)Not determined19332855120539663Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132875174Mouse
1300776Lfp3_mlong free running period 3 (mouse)Not determined19120328703Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse

Markers in Region
AI115133  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38196,398,137 - 6,398,327UniSTSGRCm38
MGSCv37196,398,137 - 6,398,327UniSTSGRCm37
Celera196,271,154 - 6,271,344UniSTS
Cytogenetic Map19AUniSTS
cM Map192.0UniSTS
Whitehead/MRC_RH1937.7UniSTS
RH140670  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38196,389,908 - 6,390,996UniSTSGRCm38
MGSCv37196,389,908 - 6,390,996UniSTSGRCm37
Celera196,262,925 - 6,264,013UniSTS
Cytogenetic Map19AUniSTS
cM Map192.0UniSTS
Pygm  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19AUniSTS
cM Map194.53UniSTS


Sequence


Ensembl Acc Id: ENSMUST00000035269   ⟹   ENSMUSP00000047564
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,434,429 - 6,448,489 (+)Ensembl
GRCm38.p6 Ensembl196,384,399 - 6,398,459 (+)Ensembl
Ensembl Acc Id: ENSMUST00000113483   ⟹   ENSMUSP00000109111
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,434,445 - 6,448,478 (+)Ensembl
GRCm38.p6 Ensembl196,384,415 - 6,398,448 (+)Ensembl
Ensembl Acc Id: ENSMUST00000139775
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,447,525 - 6,448,321 (+)Ensembl
GRCm38.p6 Ensembl196,397,495 - 6,398,291 (+)Ensembl
Ensembl Acc Id: ENSMUST00000142755
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,442,741 - 6,444,214 (+)Ensembl
GRCm38.p6 Ensembl196,392,711 - 6,394,184 (+)Ensembl
RefSeq Acc Id: NM_011224   ⟹   NP_035354
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39196,434,438 - 6,448,494 (+)NCBI
GRCm38196,384,408 - 6,398,464 (+)NCBI
MGSCv37196,384,429 - 6,398,459 (+)RGD
Celera196,257,446 - 6,271,476 (+)RGD
cM Map19 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_035354 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD30476 (Get FASTA)   NCBI Sequence Viewer  
  AAH12961 (Get FASTA)   NCBI Sequence Viewer  
  BAB31534 (Get FASTA)   NCBI Sequence Viewer  
  EDL33244 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000047564
  ENSMUSP00000047564.9
  ENSMUSP00000109111.2
GenBank Protein Q9WUB3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_035354   ⟸   NM_011224
- UniProtKB: Q9WUB3 (UniProtKB/Swiss-Prot),   E9PUM3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000109111   ⟸   ENSMUST00000113483
Ensembl Acc Id: ENSMUSP00000047564   ⟸   ENSMUST00000035269

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WUB3-F1-model_v2 AlphaFold Q9WUB3 1-842 view protein structure

Promoters
RGD ID:6830348
Promoter ID:MM_KWN:26192
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Lung
Transcripts:ENSMUST00000113483,   OTTMUST00000044793
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36196,383,566 - 6,384,362 (+)MPROMDB
RGD ID:13678674
Promoter ID:EPDNEW_M23486
Type:multiple initiation site
Name:Pygm_1
Description:Mus musculus muscle glycogen phosphorylase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38196,384,415 - 6,384,475EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97830 AgrOrtholog
Ensembl Genes ENSMUSG00000032648 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000035269 ENTREZGENE
  ENSMUST00000035269.15 UniProtKB/Swiss-Prot
  ENSMUST00000113483.2 UniProtKB/TrEMBL
Gene3D-CATH Glycogen Phosphorylase B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Glycg_phsphrylas UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_trans_35 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pyridoxal_P_attach_site UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19309 UniProtKB/Swiss-Prot
MGD MGI:97830 ENTREZGENE
NCBI Gene 19309 ENTREZGENE
PANTHER GLYCOGEN PHOSPHORYLASE, MUSCLE FORM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11468 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Phosphorylase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pygm PhenoGen
PIRSF Pprylas_GlgP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE PHOSPHORYLASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP UDP-Glycosyltransferase/glycogen phosphorylase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E9PUM3 ENTREZGENE, UniProtKB/TrEMBL
  PYGM_MOUSE UniProtKB/Swiss-Prot
  Q9CTZ0_MOUSE UniProtKB/TrEMBL
  Q9WUB3 ENTREZGENE