Klf15 (Kruppel-like transcription factor 15) - Rat Genome Database

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Gene: Klf15 (Kruppel-like transcription factor 15) Mus musculus
Analyze
Symbol: Klf15
Name: Kruppel-like transcription factor 15
RGD ID: 737262
MGI Page MGI
Description: Enables DNA-binding transcription factor activity and transcription cis-regulatory region binding activity. Involved in several processes, including cardiac muscle hypertrophy in response to stress; negative regulation of peptidyl-lysine acetylation; and podocyte differentiation. Acts upstream of or within several processes, including intracellular glucose homeostasis; positive regulation of D-glucose import; and response to insulin. Located in nucleus. Is expressed in several structures, including central nervous system; cranium; early conceptus; metanephros; and nose. Used to study aortic aneurysm. Orthologous to human KLF15 (KLF transcription factor 15).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1810013I09Rik; AV048136; AW494632; cardiovascular Krueppel-like factor; CKL; CKLF; hlb44; hlb444; KKL; KKLF; Krueppel-like factor 15; Kruppel-like factor 15
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39690,437,785 - 90,468,785 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl690,439,558 - 90,452,220 (+)EnsemblGRCm39 Ensembl
GRCm38690,461,043 - 90,491,803 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl690,462,576 - 90,475,238 (+)EnsemblGRCm38mm10GRCm38
MGSCv37690,412,620 - 90,425,203 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36690,428,130 - 90,440,713 (+)NCBIMGSCv36mm8
Celera692,350,733 - 92,363,315 (+)NCBICelera
Cytogenetic Map6D1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-methylfuran  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroxyphenyl retinamide  (EXP)
acrylamide  (ISO)
aflatoxin B1  (EXP)
AICA ribonucleotide  (EXP)
amiodarone  (ISO)
ammonium chloride  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-lapachone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bromobenzene  (ISO)
buspirone  (ISO)
buta-1,3-diene  (EXP)
butanal  (ISO)
C60 fullerene  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chloroprene  (EXP,ISO)
choline  (EXP)
cyclosporin A  (ISO)
dexamethasone  (EXP)
diazinon  (ISO)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
folic acid  (EXP)
furan  (ISO)
gentamycin  (ISO)
glyphosate  (EXP)
hexadecanoic acid  (ISO)
isoprenaline  (EXP)
ketamine  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
levofloxacin  (ISO)
LY294002  (EXP)
metformin  (EXP)
methamphetamine  (EXP,ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
Muraglitazar  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
naphthalene  (EXP)
nefazodone  (ISO)
nevirapine  (ISO)
nickel atom  (ISO)
niclosamide  (ISO)
O-methyleugenol  (ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
panobinostat  (ISO)
paracetamol  (ISO)
paraquat  (EXP,ISO)
parathion  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
pirinixic acid  (EXP)
potassium bromate  (EXP)
progesterone  (ISO)
propanal  (ISO)
prothioconazole  (ISO)
quercetin  (ISO)
resveratrol  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sevoflurane  (ISO)
silicon dioxide  (EXP)
silver atom  (EXP)
silver(0)  (EXP)
sodium fluoride  (EXP)
streptozocin  (EXP)
sunitinib  (ISO)
tenofovir disoproxil fumarate  (ISO)
tetrachloromethane  (EXP,ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
tributylstannane  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
triptonide  (EXP)
troglitazone  (ISO)
urethane  (ISO)
ursodeoxycholic acid  (ISO)
valdecoxib  (ISO)
valproic acid  (ISO)
vancomycin  (EXP)
zinc atom  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abdominal aorta aneurysm  (IAGP)
abnormal angiogenesis  (IAGP)
abnormal aorta morphology  (IAGP)
abnormal aorta tunica adventitia morphology  (IAGP)
abnormal aorta tunica media morphology  (IAGP)
abnormal circulating amino acid level  (IAGP)
abnormal enzyme/coenzyme activity  (IAGP)
abnormal gluconeogenesis  (IAGP)
abnormal hepatocyte physiology  (IAGP)
abnormal metabolism  (IAGP)
aortic hypertrophy  (IAGP)
blood vessel inflammation  (IAGP)
cardiomyopathy  (IAGP)
decreased circulating glucose level  (IAGP)
decreased circulating lactate level  (IAGP)
decreased heart left ventricle muscle contractility  (IAGP)
decreased liver glycogen level  (IAGP)
decreased total body fat amount  (IAGP)
dilated aorta  (IAGP)
dilated heart  (IAGP)
dilated heart left ventricle  (IAGP)
enlarged heart  (IAGP)
heart left ventricle hypertrophy  (IAGP)
hypoglycemia  (IAGP)
improved glucose tolerance  (IAGP)
increased circulating cholesterol level  (IAGP)
increased circulating glucagon level  (IAGP)
increased circulating ketone body level  (IAGP)
increased circulating triglyceride level  (IAGP)
increased glycerol level  (IAGP)
increased lean body mass  (IAGP)
increased macrophage cell number  (IAGP)
increased myocardial fiber size  (IAGP)
increased response of heart to induced stress  (IAGP)
increased susceptibility to atherosclerosis  (IAGP)
increased susceptibility to induced aneurysm formation  (IAGP)
increased susceptibility to induced morbidity/mortality  (IAGP)
ketoaciduria  (IAGP)
thoracic aorta aneurysm  (IAGP)
vascular smooth muscle hypoplasia  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. The Kruppel-like factor KLF15 regulates the insulin-sensitive glucose transporter GLUT4. Gray S, etal., J Biol Chem 2002 Sep 13;277(37):34322-8.
3. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
4. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. MGD IEA MGD IEA
7. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. Identifying new candidate genes for hereditary facial paresis on chromosome 3q21-q22 by RNA in situ hybridization in mouse. van der Zwaag B, etal., Genomics 2005 Jul;86(1):55-67. Epub 2005 Apr 20.
12. KLF15 is an essential negative regulatory factor for the cardiac remodeling response to pressure overload. Yu Y, etal., Cardiology. 2015;130(3):143-52. doi: 10.1159/000369382. Epub 2015 Jan 24.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15277472   PMID:15489334   PMID:15664998   PMID:15782199   PMID:15820306   PMID:16141072  
PMID:16141073   PMID:16602821   PMID:16615998   PMID:17403374   PMID:17438289   PMID:18287559   PMID:18586263   PMID:19094967   PMID:19741146   PMID:20059953   PMID:20375365   PMID:20393151  
PMID:20412781   PMID:20508206   PMID:20566642   PMID:20956975   PMID:21257922   PMID:21267068   PMID:21503941   PMID:21677750   PMID:21862590   PMID:21873635   PMID:22367544   PMID:22405069  
PMID:22493257   PMID:22493483   PMID:22538816   PMID:22767436   PMID:23332504   PMID:23508109   PMID:23999430   PMID:24167585   PMID:24204793   PMID:24358263   PMID:24407292   PMID:24449835  
PMID:24680826   PMID:24952961   PMID:26040986   PMID:26111268   PMID:26598680   PMID:26686628   PMID:26692489   PMID:27545894   PMID:27743478   PMID:28336438   PMID:28465484   PMID:28651950  
PMID:28830816   PMID:29186676   PMID:29241541   PMID:29408889   PMID:29735415   PMID:29901095   PMID:30143559   PMID:30776250   PMID:30830866   PMID:30842568   PMID:31553739   PMID:31582141  
PMID:31852847   PMID:31919398   PMID:31922214   PMID:32186780   PMID:32251422   PMID:32313099   PMID:32325033   PMID:32339045   PMID:32694878   PMID:33155243   PMID:33206716   PMID:33586679  
PMID:33795032   PMID:34310909   PMID:34321999   PMID:34350769   PMID:34535735   PMID:34688045   PMID:34902552   PMID:35290243   PMID:35413288   PMID:35656890   PMID:35983694   PMID:36304102  
PMID:36334846   PMID:36949106   PMID:37648149   PMID:37673339   PMID:37833977   PMID:37984156   PMID:38131461   PMID:38575112   PMID:38582447   PMID:38949025   PMID:39289460  


Genomics

Comparative Map Data
Klf15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39690,437,785 - 90,468,785 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl690,439,558 - 90,452,220 (+)EnsemblGRCm39 Ensembl
GRCm38690,461,043 - 90,491,803 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl690,462,576 - 90,475,238 (+)EnsemblGRCm38mm10GRCm38
MGSCv37690,412,620 - 90,425,203 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36690,428,130 - 90,440,713 (+)NCBIMGSCv36mm8
Celera692,350,733 - 92,363,315 (+)NCBICelera
Cytogenetic Map6D1NCBI
KLF15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383126,288,125 - 126,357,408 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3126,342,635 - 126,357,408 (-)EnsemblGRCh38hg38GRCh38
GRCh373126,061,478 - 126,076,251 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363127,544,168 - 127,558,926 (-)NCBINCBI36Build 36hg18NCBI36
Build 343127,544,176 - 127,558,935NCBI
Celera3124,486,052 - 124,501,056 (-)NCBICelera
Cytogenetic Map3q21.3NCBI
HuRef3123,442,097 - 123,456,745 (-)NCBIHuRef
CHM1_13126,024,493 - 126,039,263 (-)NCBICHM1_1
T2T-CHM13v2.03129,020,460 - 129,089,956 (-)NCBIT2T-CHM13v2.0
Klf15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84124,522,652 - 124,535,613 (+)NCBIGRCr8
mRatBN7.24122,965,718 - 122,978,403 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4122,965,807 - 122,978,374 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4128,433,270 - 128,445,908 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04124,207,692 - 124,220,330 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04122,832,265 - 122,844,900 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04122,364,688 - 122,377,690 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4122,365,093 - 122,377,659 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04186,905,687 - 186,918,647 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44124,714,395 - 124,726,991 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14124,958,875 - 124,971,472 (+)NCBI
Celera4111,889,901 - 111,902,497 (+)NCBICelera
Cytogenetic Map4q34NCBI
Klf15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542121,609,643 - 21,620,255 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542121,609,709 - 21,618,920 (-)NCBIChiLan1.0ChiLan1.0
KLF15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22124,276,383 - 124,290,991 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13124,281,164 - 124,295,988 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03123,395,678 - 123,410,514 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13130,712,599 - 130,724,530 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3130,712,599 - 130,724,530 (-)Ensemblpanpan1.1panPan2
KLF15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.120513,649 - 524,873 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl20513,622 - 523,395 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha20549,887 - 563,042 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.020523,989 - 537,146 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl20522,954 - 537,258 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.120254,875 - 268,029 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.020581,895 - 595,033 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.020542,602 - 555,759 (-)NCBIUU_Cfam_GSD_1.0
Klf15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494219,161,585 - 19,171,427 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936898519,572 - 529,319 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLF15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl753,877,818 - 53,889,144 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1753,877,813 - 53,890,558 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Pig Cytomap7q13NCBI
KLF15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12254,659,406 - 54,674,321 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2254,659,703 - 54,674,368 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041111,622,080 - 111,636,842 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Klf15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624773243,569 - 257,531 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624773243,599 - 256,786 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Klf15
1228 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:873
Count of miRNA genes:289
Interacting mature miRNAs:339
Transcripts:ENSMUST00000032174, ENSMUST00000113530
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671958006105958152Mouse
10412119Stv_mstriatal volumne (mouse)Not determined660026991100026967Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671958006105958152Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67797698396976961Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
12792979Fbmd2_mfemoral bone mineral density 2, females only (mouse)675026989115026943Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67552133992584431Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67552133994202936Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65842456692424693Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671552042105552160Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67129960593441074Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675424566104480516Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65851741692517416Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined688982366122982564Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63864656092584431Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684099474118099474Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687480321121480516Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675584287109584431Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686783787113521563Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670402880104403016Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652138693116132228Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670402880104403016Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676440930110441074Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66346172197461888Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675693484109693678Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666690851100691013Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670402880104403016Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681476981102176961Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67552133994202936Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66003466394034782Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678606487121092347Mouse

Markers in Region
Klf15  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38690,470,157 - 90,470,316UniSTSGRCm38
MGSCv37690,420,151 - 90,420,310UniSTSGRCm37
Celera692,358,264 - 92,358,421UniSTS
Cytogenetic Map6D1UniSTS
cM Map6 UniSTS
AW494632  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38690,474,600 - 90,474,701UniSTSGRCm38
MGSCv37690,424,594 - 90,424,695UniSTSGRCm37
Celera692,362,706 - 92,362,807UniSTS
Cytogenetic Map6D1UniSTS
Whitehead/MRC_RH6917.67UniSTS
AV048136  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38690,474,862 - 90,474,980UniSTSGRCm38
MGSCv37690,424,856 - 90,424,974UniSTSGRCm37
Celera692,362,968 - 92,363,086UniSTS
Cytogenetic Map6D1UniSTS
Whitehead/MRC_RH6918.37UniSTS
RH140732  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38690,466,615 - 90,466,822UniSTSGRCm38
MGSCv37690,416,609 - 90,416,816UniSTSGRCm37
Celera692,354,722 - 92,354,929UniSTS
Cytogenetic Map6D1UniSTS
Klf15  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_023184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011241425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC163346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF317225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000032174   ⟹   ENSMUSP00000032174
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl690,439,558 - 90,452,220 (+)Ensembl
GRCm38.p6 Ensembl690,462,576 - 90,475,238 (+)Ensembl
Ensembl Acc Id: ENSMUST00000113530   ⟹   ENSMUSP00000109158
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl690,442,286 - 90,452,217 (+)Ensembl
GRCm38.p6 Ensembl690,465,304 - 90,475,235 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203039   ⟹   ENSMUSP00000144962
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl690,439,656 - 90,452,220 (+)Ensembl
GRCm38.p6 Ensembl690,462,674 - 90,475,238 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203607   ⟹   ENSMUSP00000144808
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl690,443,382 - 90,452,217 (+)Ensembl
GRCm38.p6 Ensembl690,466,400 - 90,475,235 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205136   ⟹   ENSMUSP00000145043
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl690,444,100 - 90,452,203 (+)Ensembl
GRCm38.p6 Ensembl690,467,118 - 90,475,221 (+)Ensembl
RefSeq Acc Id: NM_001355668   ⟹   NP_001342597
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,439,558 - 90,456,668 (+)NCBI
GRCm38690,462,576 - 90,479,686 (+)NCBI
Sequence:
RefSeq Acc Id: NM_023184   ⟹   NP_075673
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,439,558 - 90,452,220 (+)NCBI
GRCm38690,462,576 - 90,475,238 (+)NCBI
MGSCv37690,412,620 - 90,425,203 (+)RGD
Celera692,350,733 - 92,363,315 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006506471   ⟹   XP_006506534
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,441,972 - 90,452,217 (+)NCBI
GRCm38690,464,999 - 90,475,235 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506472   ⟹   XP_006506535
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,441,960 - 90,452,217 (+)NCBI
GRCm38690,464,986 - 90,473,641 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011241425   ⟹   XP_011239727
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,441,964 - 90,456,152 (+)NCBI
GRCm38690,464,990 - 90,479,170 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255539   ⟹   XP_030111399
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,437,785 - 90,452,217 (+)NCBI
GRCm38690,461,043 - 90,475,235 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003956248
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,441,964 - 90,468,785 (+)NCBI
GRCm38690,464,990 - 90,491,803 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003956249
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,437,785 - 90,456,152 (+)NCBI
GRCm38690,461,043 - 90,479,170 (+)NCBI
Sequence:
RefSeq Acc Id: XR_377485
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39690,441,964 - 90,456,152 (+)NCBI
GRCm38690,464,990 - 90,479,170 (+)NCBI
Sequence:
RefSeq Acc Id: NP_075673   ⟸   NM_023184
- Peptide Label: isoform 1
- UniProtKB: Q9EPW2 (UniProtKB/Swiss-Prot),   Q3UQB0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506535   ⟸   XM_006506472
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006506534   ⟸   XM_006506471
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011239727   ⟸   XM_011241425
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030111399   ⟸   XM_030255539
- Peptide Label: isoform X4
RefSeq Acc Id: NP_001342597   ⟸   NM_001355668
- Peptide Label: isoform 2
Ensembl Acc Id: ENSMUSP00000144808   ⟸   ENSMUST00000203607
Ensembl Acc Id: ENSMUSP00000032174   ⟸   ENSMUST00000032174
Ensembl Acc Id: ENSMUSP00000144962   ⟸   ENSMUST00000203039
Ensembl Acc Id: ENSMUSP00000109158   ⟸   ENSMUST00000113530
Ensembl Acc Id: ENSMUSP00000145043   ⟸   ENSMUST00000205136
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9EPW2-F1-model_v2 AlphaFold Q9EPW2 1-415 view protein structure

Promoters
RGD ID:6839534
Promoter ID:MM_KWN:46882
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000052904
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36690,411,611 - 90,412,772 (+)MPROMDB
RGD ID:6839533
Promoter ID:MM_KWN:46883
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung,   Spleen
Transcripts:ENSMUST00000113530
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36690,414,706 - 90,415,312 (+)MPROMDB
RGD ID:6839535
Promoter ID:MM_KWN:46884
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   3T3L1_Day6,   Kidney,   Liver,   Lung
Transcripts:UC009CXK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36690,415,606 - 90,417,432 (+)MPROMDB
RGD ID:6890414
Promoter ID:EPDNEW_M8658
Type:initiation region
Name:Klf15_1
Description:Mus musculus Kruppel-like factor 15 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38690,462,597 - 90,462,657EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1929988 AgrOrtholog
Ensembl Genes ENSMUSG00000030087 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032174 ENTREZGENE
  ENSMUST00000032174.12 UniProtKB/Swiss-Prot
  ENSMUST00000113530.4 UniProtKB/Swiss-Prot
  ENSMUST00000203039.3 UniProtKB/Swiss-Prot
  ENSMUST00000203607.2 UniProtKB/Swiss-Prot
  ENSMUST00000205136.2 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:66277 UniProtKB/Swiss-Prot
MGD MGI:1929988 ENTREZGENE
NCBI Gene 66277 ENTREZGENE
PANTHER KRUEPPEL-LIKE FACTOR 15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KRUEPPEL-LIKE TRANSCRIPTION FACTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/Swiss-Prot
PhenoGen Klf15 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SVC6_MOUSE UniProtKB/TrEMBL
  KLF15_MOUSE UniProtKB/Swiss-Prot
  Q3UQB0 ENTREZGENE
  Q9EPW2 ENTREZGENE
UniProt Secondary Q3UQB0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-02 Klf15  Kruppel-like transcription factor 15  Klf15  Kruppel-like factor 15  Symbol and/or name change 5135510 APPROVED