Actb (actin, beta) - Rat Genome Database

Name: Actb
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Actb (actin, beta) Mus musculus

Analyze

Symbol:

Actb

Name:

actin, beta

RGD ID:

735802

MGI Page

MGI

Description:

Predicted to enable several functions, including Tat protein binding activity; enzyme binding activity; and kinesin binding activity. Predicted to be a structural constituent of postsynaptic actin cytoskeleton. Involved in negative regulation of protein binding activity and regulation of synaptic vesicle endocytosis. Located in several cellular components, including brush border; cortical cytoskeleton; and cytosol. Is active in Schaffer collateral - CA1 synapse and calyx of Held. Is expressed in several structures, including decidua; early conceptus; gonad; musculature; and tooth. Used to study Alzheimer's disease. Human ortholog(s) of this gene implicated in Baraitser-Winter syndrome 1. Orthologous to human ACTB (actin beta).

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

A-X actin-like protein; Act; actin, beta, cytoplasmic; actin, cytoplasmic 1; Actx; beta-a; beta-actin; E430023M04Rik; melanoma X-actin

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ACTB (actin beta)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Actb (actin, beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Actb (actin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ACTB (actin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ACTB (actin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Actb (actin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ACTB (actin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ACTB (actin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Actb (actin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ACTG1 (actin gamma 1)	HGNC	OrthoDB, OrthoMCL, Panther
Homo sapiens (human):	ACTBL2 (actin beta like 2)	HGNC	OrthoDB, OrthoMCL
Homo sapiens (human):	POTEE (POTE ankyrin domain family member E)	HGNC	EggNOG, OrthoMCL
Homo sapiens (human):	ACTC1 (actin alpha cardiac muscle 1)	HGNC	OrthoMCL
Homo sapiens (human):	ACTG2 (actin gamma 2, smooth muscle)	HGNC	OrthoMCL
Homo sapiens (human):	ACTA1 (actin alpha 1, skeletal muscle)	HGNC	OrthoMCL
Homo sapiens (human):	ACTA2 (actin alpha 2, smooth muscle)	HGNC	OrthoMCL
Homo sapiens (human):	POTEF (POTE ankyrin domain family member F)	HGNC	OrthoMCL
Homo sapiens (human):	POTEJ (POTE ankyrin domain family member J)	HGNC	OrthoMCL
Homo sapiens (human):	POTEI (POTE ankyrin domain family member I)	HGNC	OrthoMCL
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Actb (actin, beta)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ACTB (actin beta)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	actb1 (actin, beta 1)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	actb2 (actin, beta 2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	ACT1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	act-4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Act42A	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Act57B	Alliance	DIOPT (Hieranoid\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	Act5C	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Act79B	Alliance	DIOPT (Hieranoid\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	Act87E	Alliance	DIOPT (Hieranoid\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	Act88F	Alliance	DIOPT (Hieranoid\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	act-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	act-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	act-3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	actb	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)

Related Pseudogenes:

Actb-ps1 Actg-ps1 Gm14348 Gm14356 Gm14357 Gm14361 Gm14375 Gm14610 Gm14747 Gm15252 Gm15256 Gm15257 Gm15260 Gm15273 Gm15725 Gm16423 Gm17087 Gm17854 Gm17855 Gm17856 Gm17857 Gm17858 Gm17859 Gm17860 Gm17862 Gm17863 Gm17864 Gm17865 Gm17866 Gm17875 Gm17878 Gm17883 Gm4750 Gm4760 Gm4918 Gm5241 Gm6375 Gm7023 Gm9348

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	142,888,870 - 142,892,509 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	142,888,870 - 142,892,509 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	142,903,115 - 142,907,976 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	142,903,115 - 142,906,754 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	143,664,795 - 143,668,403 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	143,168,256 - 143,171,864 (-)	NCBI		MGSCv36	mm8
Celera	5	139,951,533 - 139,955,141 (-)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	81.8	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Animal Mammary Neoplasms (ISO)

Baraitser-Winter syndrome (ISO)

Baraitser-Winter syndrome 1 (ISO)

carcinoma (ISO)

Chemical and Drug Induced Liver Injury (ISO)

coloboma (ISO)

Craniofacial Abnormalities (ISO)

Dwarfism (ISO)

dysostosis (ISO)

dystonia (ISO)

Esophageal Neoplasms (ISO)

Experimental Mammary Neoplasms (ISO)

Febrile Seizures (ISO)

genetic disease (ISO)

hand, foot and mouth disease (ISO)

hepatocellular carcinoma (ISO)

Hypoxia (ISO)

intellectual disability (ISO)

Juvenile-Onset Dystonia (ISO)

Lung Neoplasms (ISO)

Myocardial Ischemia (ISO)

Neoplasm Invasiveness (ISO)

Nervous System Malformations (ISO)

Neurodevelopmental Disorders (ISO)

non-alcoholic fatty liver disease (ISO)

osteoarthritis (ISO)

sensorineural hearing loss (ISO)

smooth muscle hamartoma (ISO)

temporal lobe epilepsy (ISO)

thrombocytopenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

(+)-epicatechin-3-O-gallate (ISO)

(+)-pilocarpine (EXP)

(-)-epigallocatechin 3-gallate (ISO)

(3,4-dihydroxyphenyl)acetic acid (ISO)

(S)-amphetamine (EXP)

(S)-nicotine (EXP)

1,2-dichloroethane (EXP)

1,2-dimethylhydrazine (EXP)

1-chloro-2,4-dinitrobenzene (ISO)

17beta-estradiol (EXP,ISO)

17beta-estradiol 3-benzoate (ISO)

17beta-hydroxy-17-methylestra-4,9,11-trien-3-one (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3',4,4',5-Pentachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

2,4,6-trinitrobenzenesulfonic acid (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (EXP)

2,4-dinitrotoluene (ISO)

2-amino-2-deoxy-D-galactopyranose (ISO)

2-methylcholine (ISO)

3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine (ISO)

3,4-methylenedioxymethamphetamine (EXP)

3-chloropropane-1,2-diol (ISO)

3-isobutyl-1-methyl-7H-xanthine (EXP)

3-phenylprop-2-enal (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroperoxycyclophosphamide (EXP)

4-hydroxynon-2-enal (ISO)

4-vinylcyclohexene dioxide (EXP)

5-fluorouracil (EXP)

7,12-dimethyltetraphene (EXP)

abamectin (EXP)

acetamide (ISO)

acetic acid (EXP)

acetylsalicylic acid (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (EXP,ISO)

aldehydo-D-glucose (ISO)

all-trans-retinoic acid (EXP,ISO)

all-trans-retinol (ISO)

alloxan (EXP)

Allylamine (ISO)

alpha-pinene (ISO)

ammonium chloride (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (EXP,ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

bathocuproine disulfonic acid (ISO)

beauvericin (ISO)

benzene (ISO)

benzo[a]pyrene (EXP,ISO)

bis(2-chloroethyl) sulfide (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

Brodifacoum (ISO)

bromobenzene (ISO)

bromochloroacetic acid (EXP)

bufalin (ISO)

buspirone (ISO)

butan-1-ol (ISO)

butanal (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

calcidiol (ISO)

calcitriol (ISO)

calcium atom (ISO)

calcium(0) (ISO)

carbon disulfide (ISO)

carbon nanotube (EXP,ISO)

ceftriaxone (ISO)

chloromethylisothiazolinone (ISO)

chloropicrin (ISO)

cisplatin (ISO)

clobetasol (EXP)

clofibrate (EXP,ISO)

clozapine (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) chloride (EXP)

copper(II) sulfate (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

Cuprizon (ISO)

cyclophosphamide (ISO)

cyclosporin A (EXP,ISO)

D-glucose (ISO)

DDT (ISO)

dexamethasone (EXP)

diarsenic trioxide (ISO)

dibenzo[a,l]pyrene (ISO)

dibutyl phthalate (EXP,ISO)

dicrotophos (ISO)

diethylstilbestrol (EXP)

dioxygen (ISO)

disodium selenite (ISO)

dopamine (ISO)

Doramectin (EXP)

doxorubicin (ISO)

elemental selenium (ISO)

endosulfan (ISO)

ethanol (EXP,ISO)

fenbuconazole (ISO)

fenthion (EXP)

fipronil (ISO)

flutamide (ISO)

furan (ISO)

gamma-hexachlorocyclohexane (ISO)

genistein (ISO)

gentamycin (ISO)

glucose (ISO)

glyphosate (ISO)

hyaluronic acid (ISO)

hydrogen peroxide (ISO)

indirubin-3'-monoxime (ISO)

iodide salt (ISO)

ionomycin (ISO)

isoprenaline (EXP)

ivermectin (ISO)

latrunculin A (ISO)

lead diacetate (EXP)

lead(0) (ISO)

lead(2+) (ISO)

lead(II) chloride (ISO)

leflunomide (ISO)

lidocaine (ISO)

lipopolysaccharide (ISO)

lithium atom (ISO)

lithium hydride (ISO)

lovastatin (EXP)

manganese(II) chloride (ISO)

melittin (ISO)

mercury atom (ISO)

mercury dichloride (ISO)

mercury(0) (ISO)

methamphetamine (ISO)

methapyrilene (ISO)

methidathion (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

microcystin-LR (EXP,ISO)

mifepristone (ISO)

Monobutylphthalate (EXP)

monocrotaline (ISO)

N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal (ISO)

N-methyl-4-phenylpyridinium (ISO)

N-methyl-N-nitrosourea (ISO)

N-nitrosomorpholine (ISO)

naphthalene (EXP)

nickel atom (ISO)

nickel dichloride (ISO)

nicotine (EXP)

nitric oxide (EXP)

nitroglycerin (ISO)

Nonylphenol (ISO)

ochratoxin A (ISO)

oxaliplatin (ISO)

ozone (ISO)

p-menthan-3-ol (ISO)

paracetamol (EXP,ISO)

paraoxon (ISO)

paraquat (ISO)

perfluorobutyric acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctanoic acid (ISO)

phenethyl isothiocyanate (ISO)

PhIP (ISO)

phlorizin (EXP)

phorbol 13-acetate 12-myristate (ISO)

progesterone (EXP)

propiconazole (EXP)

pyrrolidine dithiocarbamate (ISO)

quercetin (ISO)

resveratrol (ISO)

rotenone (ISO)

S-butyl-DL-homocysteine (S,R)-sulfoximine (EXP)

selenium atom (ISO)

serpentine asbestos (ISO)

silicon dioxide (ISO)

silver atom (EXP)

silver(0) (EXP)

simvastatin (ISO)

sirolimus (EXP)

sodium arsenate (EXP)

sodium arsenite (ISO)

sodium fluoride (EXP)

sulforaphane (ISO)

T-2 toxin (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

tetrachloroethene (EXP)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP,ISO)

titanium dioxide (EXP)

topotecan (ISO)

triadimefon (EXP)

tributylstannane (ISO)

trichloroethene (EXP,ISO)

triphenylstannane (ISO)

Triptolide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

trovafloxacin (ISO)

tunicamycin (ISO)

uranium atom (ISO)

valproic acid (ISO)

vancomycin (EXP)

vinclozolin (ISO)

vitamin E (ISO)

warfarin (EXP)

zinc atom (EXP)

zinc dichloride (EXP)

zinc sulfate (ISO)

zinc(0) (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adherens junction assembly (ISO)

apical protein localization (ISO)

axonogenesis (IBA,ISO)

cell motility (IBA,ISO)

cellular response to cytochalasin B (ISO)

cellular response to electrical stimulus (ISO)

chromatin remodeling (NAS)

circadian rhythm (ISO)

establishment or maintenance of cell polarity (ISO)

histone acetylation (NAS)

histone H2A acetylation (ISO)

histone H4 acetylation (ISO)

morphogenesis of a polarized epithelium (ISO)

negative regulation of cell differentiation (NAS)

negative regulation of cyclin-dependent protein kinase activity (IC)

negative regulation of protein binding (IDA)

platelet aggregation (ISO)

positive regulation of cell differentiation (NAS)

positive regulation of cell population proliferation (NAS)

positive regulation of DNA-templated transcription (NAS)

positive regulation of double-strand break repair (NAS)

positive regulation of double-strand break repair via homologous recombination (ISO)

positive regulation of myoblast differentiation (NAS)

positive regulation of stem cell population maintenance (NAS)

positive regulation of T cell differentiation (NAS)

postsynaptic actin cytoskeleton organization (ISO)

protein localization to adherens junction (ISO)

regulation of apoptotic process (NAS)

regulation of cell cycle (ISO)

regulation of cyclin-dependent protein serine/threonine kinase activity (ISO)

regulation of double-strand break repair (NAS)

regulation of G0 to G1 transition (NAS)

regulation of G1/S transition of mitotic cell cycle (NAS)

regulation of mitotic metaphase/anaphase transition (NAS)

regulation of norepinephrine uptake (ISO)

regulation of nucleotide-excision repair (NAS)

regulation of protein localization to plasma membrane (ISO)

regulation of synaptic vesicle endocytosis (IDA,IMP)

regulation of transcription by RNA polymerase II (NAS)

regulation of transepithelial transport (ISO)

regulation of transmembrane transporter activity (ISO)

response to immobilization stress (ISO)

response to mechanical stimulus (ISO)

retina development in camera-type eye (ISO)

retina homeostasis (ISO)

substantia nigra development (ISO)

Cellular Component

actin cytoskeleton (ISO)

actin filament (IBA)

adherens junction (ISO)

apical junction complex (ISO)

axon (IBA,ISO)

bBAF complex (NAS)

brahma complex (NAS)

brush border (IDA)

calyx of Held (IDA,IMP)

cell-cell junction (ISO)

chromatin (NAS)

cortical cytoskeleton (IDA)

cytoplasm (IBA,IDA,ISO)

cytoplasmic ribonucleoprotein granule (ISO)

cytoskeleton (IDA,ISO)

cytosol (IDA,TAS)

GBAF complex (NAS)

glutamatergic synapse (ISO)

kinetochore (NAS)

lamellipodium (ISO)

membrane (IBA)

membrane raft (ISO)

myelin sheath (HDA)

nBAF complex (NAS)

npBAF complex (NAS)

NuA4 histone acetyltransferase complex (IBA,ISO)

nuclear matrix (NAS)

nucleosome (ISO)

nucleus (IDA,ISO)

podosome (ISO)

postsynaptic actin cytoskeleton (ISO)

protein-containing complex (ISO)

ribonucleoprotein complex (ISO)

RSC-type complex (NAS)

Schaffer collateral - CA1 synapse (IDA,IMP)

stress fiber (ISO)

SWI/SNF complex (NAS)

synapse (IBA)

tight junction (ISO)

Molecular Function

ATP binding (IEA)

hydrolase activity (IEA)

identical protein binding (ISO)

kinesin binding (ISO)

nitric-oxide synthase binding (ISO)

nucleotide binding (IEA)

protein binding (IPI,ISO)

protein kinase binding (IBA,ISO)

structural constituent of postsynaptic actin cytoskeleton (IBA,ISO)

Tat protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

arrhythmogenic right ventricular cardiomyopathy pathway (IEA)

auditory mechanotransduction pathway (ISO)

dilated cardiomyopathy pathway (IEA)

hypertrophic cardiomyopathy pathway (IEA)

influenza A pathway (IEA)

INO80 family mediated chromatin remodeling pathway (ISO)

mitochondria transport pathway (ISO)

myocarditis pathway (IEA)

SWI/SNF family mediated chromatin remodeling pathway (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal astrocyte physiology (IAGP)

abnormal cochlear hair cell stereociliary bundle morphology (IAGP)

abnormal lipid homeostasis (IAGP)

abnormal lymph node morphology (IAGP)

abnormal motor coordination/balance (IAGP)

abnormal neuron physiology (IAGP)

abnormal outer hair cell stereociliary bundle morphology (IAGP)

abnormal regulatory T cell number (IAGP)

abnormal smooth muscle morphology (IAGP)

abnormal type IV hypersensitivity reaction (IAGP)

abnormal uterus morphology (IAGP)

decreased body size (IAGP)

decreased body weight (IAGP)

decreased cardiac muscle contractility (IAGP)

decreased circulating adiponectin level (IAGP)

decreased circulating cholesterol level (IAGP)

decreased circulating free fatty acids level (IAGP)

decreased circulating HDL cholesterol level (IAGP)

decreased circulating insulin level (IAGP)

decreased circulating LDL cholesterol level (IAGP)

decreased circulating leptin level (IAGP)

decreased epididymal fat pad weight (IAGP)

decreased fasting circulating glucose level (IAGP)

decreased follicular B cell number (IAGP)

decreased marginal zone B cell number (IAGP)

decreased outer hair cell stereocilia number (IAGP)

decreased single-positive T cell number (IAGP)

decreased susceptibility to experimental autoimmune encephalomyelitis (IAGP)

delayed fertility (IAGP)

embryonic growth retardation (IAGP)

embryonic lethality at implantation, complete penetrance (IAGP)

embryonic lethality between implantation and somite formation, complete penetrance (IAGP)

embryonic lethality during organogenesis, complete penetrance (IAGP)

enlarged gallbladder (IAGP)

enlarged seminal vesicle (IAGP)

impaired hearing (IAGP)

improved glucose tolerance (IAGP)

increased circulating glucose level (IAGP)

increased circulating insulin level (IAGP)

increased circulating ketone body level (IAGP)

increased food intake (IAGP)

increased hemangioma incidence (IAGP)

increased leiomyosarcoma incidence (IAGP)

increased mammary adenocarcinoma incidence (IAGP)

increased or absent threshold for auditory brainstem response (IAGP)

increased oxygen consumption (IAGP)

increased sarcoma incidence (IAGP)

increased susceptibility to age-related hearing loss (IAGP)

increased thymocyte number (IAGP)

no abnormal phenotype detected (IAGP)

postnatal lethality, complete penetrance (IAGP)

postnatal lethality, incomplete penetrance (IAGP)

premature death (IAGP)

prenatal lethality, complete penetrance (IAGP)

preweaning lethality, complete penetrance (IAGP)

preweaning lethality, incomplete penetrance (IAGP)

short cochlear hair cell stereocilia (IAGP)

short outer hair cell stereocilia (IAGP)

spleen hypoplasia (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	ATP-dependent chromatin remodeling: genetics, genomics and mechanisms.	Hargreaves DC and Crabtree GR, Cell Res. 2011 Mar;21(3):396-420. doi: 10.1038/cr.2011.32. Epub 2011 Mar 1.
2.	Reference genes for real-time PCR quantification of microRNAs and messenger RNAs in rat models of hepatotoxicity.	Lardizabal MN, etal., PLoS One. 2012;7(5):e36323. doi: 10.1371/journal.pone.0036323. Epub 2012 May 1.
3.	Protein carbonylation associated to high-fat, high-sucrose diet and its metabolic effects.	Mendez L, etal., J Nutr Biochem. 2014 Dec;25(12):1243-53. doi: 10.1016/j.jnutbio.2014.06.014. Epub 2014 Sep 6.
4.	Electronic Transfer of Homolog Data	MGD and Homologene mouse data transfer
5.	MGDs mouse GO annotations	MGD data from the GO Consortium
6.	MGD IEA	MGD IEA
7.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
8.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
9.	'Designer' tumors in mice.	Politi K, etal., Oncogene. 2004 Feb 26;23(8):1558-65.
10.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
11.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
13.	Dynactin.	Schroer TA, Annu Rev Cell Dev Biol. 2004;20:759-79.
14.	Review series: The cell biology of hearing.	Schwander M, etal., J Cell Biol. 2010 Jul 12;190(1):9-20. doi: 10.1083/jcb.201001138.
15.	Validation of reference genes for quantitative real-time PCR studies in the dentate gyrus after experimental febrile seizures.	Swijsen A, etal., BMC Res Notes. 2012 Dec 13;5:685. doi: 10.1186/1756-0500-5-685.
16.	The INO80 family of chromatin-remodeling enzymes: regulators of histone variant dynamics.	Watanabe S and Peterson CL, Cold Spring Harb Symp Quant Biol. 2010;75:35-42. doi: 10.1101/sqb.2010.75.063. Epub 2011 Apr 18.
17.	Kainate-induced seizures alter protein composition and N-methyl-D-aspartate receptor function of rat forebrain postsynaptic densities.	Wyneken U, etal., Neuroscience. 2001;102(1):65-74.
18.	Identification of SAA and ACTB as potential biomarker of patients with severe HFMD using iTRAQ quantitative proteomics.	Zhou F, etal., Clin Biochem. 2019 May;67:1-6. doi: 10.1016/j.clinbiochem.2019.02.011. Epub 2019 Feb 25.

Additional References at PubMed

PMID:213279	PMID:1555776	PMID:1577857	PMID:1592003	PMID:1611214	PMID:1618323	PMID:1618860	PMID:1728592	PMID:1968414	PMID:2201580	PMID:3084797	PMID:3182774
PMID:3221869	PMID:3422100	PMID:3677181	PMID:3754329	PMID:6306256	PMID:6641707	PMID:6893015	PMID:6953429	PMID:7478547	PMID:7490564	PMID:7493406	PMID:7510589
PMID:7528108	PMID:7544156	PMID:7544313	PMID:7550314	PMID:7588063	PMID:7597044	PMID:7618085	PMID:7619733	PMID:7622488	PMID:7624144	PMID:7628699	PMID:7632727
PMID:7635051	PMID:7646816	PMID:7647795	PMID:7655084	PMID:7671815	PMID:7689222	PMID:7690561	PMID:7715727	PMID:7720575	PMID:7721778	PMID:7724599	PMID:7739809
PMID:7744068	PMID:7753194	PMID:7753811	PMID:7754814	PMID:7803821	PMID:7813789	PMID:7857657	PMID:7881126	PMID:7896882	PMID:8043949	PMID:8075499	PMID:8131747
PMID:8150204	PMID:8183555	PMID:8247133	PMID:8313988	PMID:8482333	PMID:8486351	PMID:8522070	PMID:8537330	PMID:8541208	PMID:8555112	PMID:8563023	PMID:8567692
PMID:8573724	PMID:8589531	PMID:8592515	PMID:8601032	PMID:8626388	PMID:8661069	PMID:8804307	PMID:8824813	PMID:8833906	PMID:8853988	PMID:8889548	PMID:9070865
PMID:9119389	PMID:9128241	PMID:9463375	PMID:9600108	PMID:9608737	PMID:9635195	PMID:9707328	PMID:9798653	PMID:9811942	PMID:10078207	PMID:10349636	PMID:10683146
PMID:10778858	PMID:10922068	PMID:11034907	PMID:11042159	PMID:11076861	PMID:11078522	PMID:11172053	PMID:11175787	PMID:11217851	PMID:11263494	PMID:11318609	PMID:11557891
PMID:11785969	PMID:11790558	PMID:11839254	PMID:11931770	PMID:12068957	PMID:12110891	PMID:12191433	PMID:12192000	PMID:12215535	PMID:12368262	PMID:12466851	PMID:12477932
PMID:12520002	PMID:12522145	PMID:12766169	PMID:12819125	PMID:12904583	PMID:12910269	PMID:14512296	PMID:14610273	PMID:14695345	PMID:14966270	PMID:15033168	PMID:15110774
PMID:15251432	PMID:15254588	PMID:15271982	PMID:15558034	PMID:15589691	PMID:15619624	PMID:15782199	PMID:15802640	PMID:15806558	PMID:15895466	PMID:15897890	PMID:15908953
PMID:15944124	PMID:15963768	PMID:15985610	PMID:16028230	PMID:16041369	PMID:16141072	PMID:16141073	PMID:16196101	PMID:16325481	PMID:16407977	PMID:16478721	PMID:16602821
PMID:16794040	PMID:16800626	PMID:16872451	PMID:16932743	PMID:16984773	PMID:17018872	PMID:17082189	PMID:17309103	PMID:17335348	PMID:17340523	PMID:17360635	PMID:17374359
PMID:17531226	PMID:17623278	PMID:17634195	PMID:17634366	PMID:17729296	PMID:17877786	PMID:17920018	PMID:17987666	PMID:18211959	PMID:18307411	PMID:18308728	PMID:18353970
PMID:18373617	PMID:18495661	PMID:18498732	PMID:18498735	PMID:18614564	PMID:18654668	PMID:18723693	PMID:18776938	PMID:18787698	PMID:18799693	PMID:18804439	PMID:18809673
PMID:18835850	PMID:19095765	PMID:19118186	PMID:19136429	PMID:19138174	PMID:19279220	PMID:19423573	PMID:19799774	PMID:19933998	PMID:20086016	PMID:20167579	PMID:20171124
PMID:20487000	PMID:20826796	PMID:20847274	PMID:20975687	PMID:20976199	PMID:21172822	PMID:21177343	PMID:21239487	PMID:21240280	PMID:21267068	PMID:21325027	PMID:21401944
PMID:21445349	PMID:21502360	PMID:21565611	PMID:21731673	PMID:21778137	PMID:21873635	PMID:21880782	PMID:21900491	PMID:21909369	PMID:21925491	PMID:22016186	PMID:22072714
PMID:22219273	PMID:22246323	PMID:22253858	PMID:22260730	PMID:22305657	PMID:22323606	PMID:22327294	PMID:22349694	PMID:22403730	PMID:22448045	PMID:22496869	PMID:22673621
PMID:22735032	PMID:22794259	PMID:22810847	PMID:22854021	PMID:22884776	PMID:22948660	PMID:23022035	PMID:23185019	PMID:23213437	PMID:23300775	PMID:23544080	PMID:23676498
PMID:23698369	PMID:23791176	PMID:23821198	PMID:23840778	PMID:23951027	PMID:23960241	PMID:24039251	PMID:24123846	PMID:24129186	PMID:24302573	PMID:24327345	PMID:24409333
PMID:24457600	PMID:24458642	PMID:24462096	PMID:24623780	PMID:24658003	PMID:24766723	PMID:24780566	PMID:24828644	PMID:24834486	PMID:24840128	PMID:24855944	PMID:24878350
PMID:24879156	PMID:24917498	PMID:24952961	PMID:24981861	PMID:25053429	PMID:25066234	PMID:25155504	PMID:25306215	PMID:25422376	PMID:25588836	PMID:25723738	PMID:25737280
PMID:25765874	PMID:25793741	PMID:26076820	PMID:26132331	PMID:26496610	PMID:26581985	PMID:26687222	PMID:26969129	PMID:27046834	PMID:27127100	PMID:27153538	PMID:27217161
PMID:27345368	PMID:27480124	PMID:27559308	PMID:27576662	PMID:27747430	PMID:27840001	PMID:27894274	PMID:27998725	PMID:28167674	PMID:28209510	PMID:28223507	PMID:28335007
PMID:28378742	PMID:28478229	PMID:28634551	PMID:28641108	PMID:28671696	PMID:28692740	PMID:28701737	PMID:28760667	PMID:28811219	PMID:28939413	PMID:28966085	PMID:28994389
PMID:29018325	PMID:29042633	PMID:29166599	PMID:29244021	PMID:29265728	PMID:29311218	PMID:29374058	PMID:29408805	PMID:29459677	PMID:29507408	PMID:29533739	PMID:29851084
PMID:29858574	PMID:29956586	PMID:30012594	PMID:30050449	PMID:30094508	PMID:30134179	PMID:30136304	PMID:30225910	PMID:30314980	PMID:30335684	PMID:30409884	PMID:30510198
PMID:30550785	PMID:30562487	PMID:30562941	PMID:30595499	PMID:30713523	PMID:30816345	PMID:30862665	PMID:30962377	PMID:30988523	PMID:31076486	PMID:31167115	PMID:31189591
PMID:31299228	PMID:31301300	PMID:31384006	PMID:31604241	PMID:32204914	PMID:32248761	PMID:32325033	PMID:32554809	PMID:32610130	PMID:32866472	PMID:33002761	PMID:33129760
PMID:33896079	PMID:33951080	PMID:34052210	PMID:34073605	PMID:34133714	PMID:34320360	PMID:34338282	PMID:34360003	PMID:34571959	PMID:34639026	PMID:34910912	PMID:35187673
PMID:35663550	PMID:35942699	PMID:36069228	PMID:36114006	PMID:36293324	PMID:36293380	PMID:36808153

Genomics

Comparative Map Data

Actb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	142,888,870 - 142,892,509 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	142,888,870 - 142,892,509 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	142,903,115 - 142,907,976 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	142,903,115 - 142,906,754 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	143,664,795 - 143,668,403 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	143,168,256 - 143,171,864 (-)	NCBI		MGSCv36	mm8
Celera	5	139,951,533 - 139,955,141 (-)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	81.8	NCBI

ACTB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	5,527,148 - 5,530,601 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	7	5,526,409 - 5,563,902 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	5,566,779 - 5,570,232 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	5,533,312 - 5,536,747 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	5,340,026 - 5,343,462	NCBI
Celera	7	5,526,560 - 5,530,009 (-)	NCBI		Celera
Cytogenetic Map	7	p22.1	NCBI
HuRef	7	5,479,343 - 5,482,774 (-)	NCBI		HuRef
CHM1_1	7	5,566,362 - 5,569,815 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	5,644,671 - 5,648,124 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	5,613,124 - 5,616,577 (-)	NCBI

Actb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	12	11,663,112 - 11,666,697 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	11,663,109 - 11,672,877 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	12,473,135 - 12,476,105 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	12	13,096,401 - 13,099,371 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	12	12,127,796 - 12,130,766 (+)	NCBI	Rnor_WKY
Rnor_6.0	12	13,715,843 - 13,718,813 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	13,715,843 - 13,718,841 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	15,745,856 - 15,749,440 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	12,047,070 - 12,050,040 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	12,076,997 - 12,079,967 (+)	NCBI
Celera	12	13,452,443 - 13,455,413 (+)	NCBI		Celera
Cytogenetic Map	12	p11	NCBI

Actb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955460	10,356,699 - 10,361,585 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955460	10,358,100 - 10,361,585 (-)	NCBI	ChiLan1.0	ChiLan1.0

ACTB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	7	58,818,394 - 58,821,932 (-)	NCBI		NHGRI_mPanPan1

ACTB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	12,421,006 - 12,424,449 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	12,418,932 - 12,462,845 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	13,893,047 - 13,896,436 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	12,557,673 - 12,561,075 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	12,557,667 - 12,561,086 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	12,367,765 - 12,371,152 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	12,301,595 - 12,304,986 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	12,578,988 - 12,582,384 (+)	NCBI		UU_Cfam_GSD_1.0

Actb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	140,675,973 - 140,679,567 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936765	667,053 - 670,672 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936765	667,107 - 670,627 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACTB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	4,082,216 - 4,090,356 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	4,084,275 - 4,090,383 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	4,729,278 - 4,732,693 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ACTB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	16,195,676 - 16,197,161 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666090	5,777,528 - 5,781,244 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Actb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	28,087,736 - 28,090,512 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	28,087,051 - 28,090,359 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Actb
150 total Variants

miRNA Target Status

Confirmed Target Of

miRNA Gene	Mature miRNA	Method Name	Result Type	Data Type	Support Type	PMID
Mir34a	mmu-miR-34a-5p	Mirtarbase	external_info	Luciferase reporter assay	Functional MTI	18835850

Predicted Target Of

	Summary Value
Count of predictions:	1073
Count of miRNA genes:	451
Interacting mature miRNAs:	510
Transcripts:	ENSMUST00000100497, ENSMUST00000106216, ENSMUST00000163829, ENSMUST00000164765, ENSMUST00000165629, ENSMUST00000167386, ENSMUST00000167721, ENSMUST00000171419
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301362	Prnr1_m	prion resistance 1 (mouse)			Not determined		5	89418876	146787935	Mouse
10412197	Bbaa25_m	B.burgdorferi-associated arthritis 25 (mouse)			Not determined		5	109167240	143167381	Mouse
13464251	Ahl21_m	age related hearing loss, early onset 21 (mouse)					5	109167240	143167381	Mouse
1300913	Bwefm_m	body weight females and males day 10 (mouse)			Not determined		5	109439348	143439459	Mouse
1301226	Bbaa2_m	B.burgdorferi-associated arthritis 2 (mouse)			Not determined		5	115156883	149157015	Mouse
1300827	Cora1_m	correlation in cytokine production 1 (mouse)			Not determined		5	115156883	149157015	Mouse
1301857	Bglq14_m	body growth late QTL 14 (mouse)			Not determined		5	118948964	151758149	Mouse
4141081	Nidd7k_m	Nidd7 on KK-A (mouse)			Not determined			119945037	149347326	Mouse
11528552	Scram1_m	spinal cord resistance to astrocytoma modifier 1 (mouse)					5	121455402	151758149	Mouse
1301986	Bpq4_m	blood pressure QTL 4 (mouse)			Not determined		5	121555236	151758149	Mouse
1302079	Lbw3_m	lupus NZB x NZW 3 (mouse)			Not determined		5	124700335	151758149	Mouse
1301363	Pbwg13_m	postnatal body weight growth 13 (mouse)			Not determined		5	125133457	151758149	Mouse
4141218	Ath24_m	atherosclerosis 24 (mouse)			Not determined			129520084	151758149	Mouse
12880406	Jcdq2_m	joint cartilage degeneration QTL 2 (mouse)					5	129787831	151758149	Mouse
11049557	Lmr26_m	leishmaniasis resistance 26 (mouse)					5	133925558	151758149	Mouse
13504735	Ifvrq7_m	influenza virus resistance QTL 7 (mouse)					5	139509801	151658149	Mouse
13504737	Ifvrq5_m	influenza virus resistance QTL 5 (mouse)					5	139509801	151658149	Mouse
13504734	Ifvrq4_m	influenza virus resistance QTL 4 (mouse)					5	139985755	151658149	Mouse

Markers in Region

Actb

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,117 - 142,903,236	UniSTS	GRCm38
MGSCv37	5	143,664,796 - 143,664,915	UniSTS	GRCm37
Celera	5	139,951,534 - 139,951,653	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC102052P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,883,273 - 37,883,627	UniSTS	GRCm38
GRCm38	5	142,903,806 - 142,904,385	UniSTS	GRCm38
MGSCv37	16	37,883,359 - 37,883,713	UniSTS	GRCm37
MGSCv37	5	143,665,485 - 143,666,064	UniSTS	GRCm37
Celera	5	139,952,223 - 139,952,802	UniSTS
Celera	16	38,289,941 - 38,290,295	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC102156P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,537 - 142,904,756	UniSTS	GRCm38
MGSCv37	5	143,666,216 - 143,666,435	UniSTS	GRCm37
Celera	5	139,952,954 - 139,953,173	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC107891P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,507 - 142,905,474	UniSTS	GRCm38
GRCm38	16	37,882,659 - 37,883,151	UniSTS	GRCm38
MGSCv37	16	37,882,745 - 37,883,237	UniSTS	GRCm37
MGSCv37	5	143,666,186 - 143,667,153	UniSTS	GRCm37
Celera	5	139,952,924 - 139,953,891	UniSTS
Celera	16	38,289,327 - 38,289,819	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC108483P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,772 - 142,904,245	UniSTS	GRCm38
MGSCv37	5	143,665,451 - 143,665,924	UniSTS	GRCm37
Celera	5	139,952,189 - 139,952,662	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC109653P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,780 - 37,883,196	UniSTS	GRCm38
GRCm38	5	142,904,462 - 142,905,353	UniSTS	GRCm38
MGSCv37	16	37,882,866 - 37,883,282	UniSTS	GRCm37
MGSCv37	5	143,666,141 - 143,667,032	UniSTS	GRCm37
Celera	5	139,952,879 - 139,953,770	UniSTS
Celera	16	38,289,448 - 38,289,864	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC114224P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC115141P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC117216P3

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,883,448 - 37,883,540	UniSTS	GRCm38
GRCm38	5	142,903,894 - 142,904,111	UniSTS	GRCm38
MGSCv37	16	37,883,534 - 37,883,626	UniSTS	GRCm37
MGSCv37	5	143,665,573 - 143,665,790	UniSTS	GRCm37
Celera	5	139,952,311 - 139,952,528	UniSTS
Celera	16	38,290,116 - 38,290,208	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC117781P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	17	8,565,833 - 8,566,152	UniSTS	GRCm38
GRCm38	5	142,903,779 - 142,904,245	UniSTS	GRCm38
MGSCv37	5	143,665,458 - 143,665,924	UniSTS	GRCm37
MGSCv37	17	8,758,698 - 8,759,017	UniSTS	GRCm37
Celera	17	8,611,955 - 8,612,274	UniSTS
Celera	5	139,952,196 - 139,952,662	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC122089P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,118 - 142,903,236	UniSTS	GRCm38
MGSCv37	5	143,664,797 - 143,664,915	UniSTS	GRCm37
Celera	5	139,951,535 - 139,951,653	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC122623P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,883,500 - 37,883,620	UniSTS	GRCm38
GRCm38	5	142,903,813 - 142,903,934	UniSTS	GRCm38
MGSCv37	16	37,883,586 - 37,883,706	UniSTS	GRCm37
MGSCv37	5	143,665,492 - 143,665,613	UniSTS	GRCm37
Celera	5	139,952,230 - 139,952,351	UniSTS
Celera	16	38,290,168 - 38,290,288	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC122924P2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,704 - 142,905,683	UniSTS	GRCm38
MGSCv37	5	143,666,383 - 143,667,362	UniSTS	GRCm37
Celera	5	139,953,121 - 139,954,100	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC125253P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,530 - 142,905,375	UniSTS	GRCm38
MGSCv37	5	143,666,209 - 143,667,054	UniSTS	GRCm37
Celera	5	139,952,947 - 139,953,792	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC125345P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,772 - 142,904,245	UniSTS	GRCm38
GRCm38	X	152,433,566 - 152,433,930	UniSTS	GRCm38
MGSCv37	X	148,868,109 - 148,868,473	UniSTS	GRCm37
MGSCv37	5	143,665,451 - 143,665,924	UniSTS	GRCm37
Celera	5	139,952,189 - 139,952,662	UniSTS
Cytogenetic Map	X	F3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC129447P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC129743P3

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,905,246 - 142,905,375	UniSTS	GRCm38
MGSCv37	5	143,666,925 - 143,667,054	UniSTS	GRCm37
Celera	5	139,953,663 - 139,953,792	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC129788P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,500 - 142,905,381	UniSTS	GRCm38
MGSCv37	5	143,666,179 - 143,667,060	UniSTS	GRCm37
Celera	5	139,952,917 - 139,953,798	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC133768P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,883,036 - 37,883,194	UniSTS	GRCm38
GRCm38	5	142,904,464 - 142,904,622	UniSTS	GRCm38
MGSCv37	16	37,883,122 - 37,883,280	UniSTS	GRCm37
MGSCv37	5	143,666,143 - 143,666,301	UniSTS	GRCm37
Celera	5	139,952,881 - 139,953,039	UniSTS
Celera	16	38,289,704 - 38,289,862	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC133829P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC135783P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,465 - 142,904,696	UniSTS	GRCm38
GRCm38	16	37,882,960 - 37,883,193	UniSTS	GRCm38
MGSCv37	16	37,883,046 - 37,883,279	UniSTS	GRCm37
MGSCv37	5	143,666,144 - 143,666,375	UniSTS	GRCm37
Celera	5	139,952,882 - 139,953,113	UniSTS
Celera	16	38,289,628 - 38,289,861	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC137757P2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,461 - 142,905,374	UniSTS	GRCm38
MGSCv37	5	143,666,140 - 143,667,053	UniSTS	GRCm37
Celera	5	139,952,878 - 139,953,791	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC137792P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	11	E2	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC138011P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,816 - 142,904,467	UniSTS	GRCm38
GRCm38	X	152,433,439 - 152,433,886	UniSTS	GRCm38
MGSCv37	X	148,867,982 - 148,868,429	UniSTS	GRCm37
MGSCv37	5	143,665,495 - 143,666,146	UniSTS	GRCm37
Celera	5	139,952,233 - 139,952,884	UniSTS
Cytogenetic Map	X	F3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC138261P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	11	E2	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC139793P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,772 - 142,904,193	UniSTS	GRCm38
MGSCv37	5	143,665,451 - 143,665,872	UniSTS	GRCm37
Celera	5	139,952,189 - 139,952,610	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC145386P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC149351P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC150974P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,786 - 142,904,625	UniSTS	GRCm38
MGSCv37	5	143,665,465 - 143,666,304	UniSTS	GRCm37
Celera	5	139,952,203 - 139,953,042	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC151001P2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC151817P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,581 - 142,903,946	UniSTS	GRCm38
MGSCv37	5	143,665,260 - 143,665,625	UniSTS	GRCm37
Celera	5	139,951,998 - 139,952,363	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC152551P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

LOC345651

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	X	152,433,013 - 152,433,142	UniSTS	GRCm38
MGSCv37	X	148,867,556 - 148,867,685	UniSTS	GRCm37
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	X	F3	UniSTS
Cytogenetic Map	8	E2	UniSTS
cM Map	5	80.0	UniSTS
cM Map	8	67.0	UniSTS

mActb

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,347 - 142,903,797	UniSTS	GRCm38
MGSCv37	5	143,665,026 - 143,665,476	UniSTS	GRCm37
Celera	5	139,951,764 - 139,952,214	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC180915P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,412 - 142,904,773	UniSTS	GRCm38
MGSCv37	5	143,666,091 - 143,666,452	UniSTS	GRCm37
Celera	5	139,952,829 - 139,953,190	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC18465P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,905,256 - 142,905,585	UniSTS	GRCm38
MGSCv37	5	143,666,935 - 143,667,264	UniSTS	GRCm37
Celera	5	139,953,673 - 139,954,002	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC187403P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC19354P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,776 - 142,904,242	UniSTS	GRCm38
MGSCv37	5	143,665,455 - 143,665,921	UniSTS	GRCm37
Celera	5	139,952,193 - 139,952,659	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC196458P4

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,905,344 - 142,905,677	UniSTS	GRCm38
MGSCv37	5	143,667,023 - 143,667,356	UniSTS	GRCm37
Celera	5	139,953,761 - 139,954,094	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC200947P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,714 - 142,905,389	UniSTS	GRCm38
MGSCv37	5	143,666,393 - 143,667,068	UniSTS	GRCm37
Celera	5	139,953,131 - 139,953,806	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC207566P4

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,905,450 - 142,905,686	UniSTS	GRCm38
MGSCv37	5	143,667,129 - 143,667,365	UniSTS	GRCm37
Celera	5	139,953,867 - 139,954,103	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC21071P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,797 - 142,904,206	UniSTS	GRCm38
MGSCv37	5	143,665,476 - 143,665,885	UniSTS	GRCm37
Celera	5	139,952,214 - 139,952,623	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC212730P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	8	E2	UniSTS
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	1	93.3	UniSTS
cM Map	5	80.0	UniSTS
cM Map	8	67.0	UniSTS

PMC21385P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,883,001 - 37,883,597	UniSTS	GRCm38
GRCm38	5	142,903,836 - 142,904,655	UniSTS	GRCm38
MGSCv37	16	37,883,087 - 37,883,683	UniSTS	GRCm37
MGSCv37	5	143,665,515 - 143,666,334	UniSTS	GRCm37
Celera	5	139,952,253 - 139,953,072	UniSTS
Celera	16	38,289,669 - 38,290,265	UniSTS
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC224995P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,190 - 142,904,779	UniSTS	GRCm38
MGSCv37	5	143,665,869 - 143,666,458	UniSTS	GRCm37
Celera	5	139,952,607 - 139,953,196	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC22515P2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,770 - 37,883,274	UniSTS	GRCm38
GRCm38	5	142,904,384 - 142,905,363	UniSTS	GRCm38
MGSCv37	5	143,666,063 - 143,667,042	UniSTS	GRCm37
MGSCv37	16	37,882,856 - 37,883,360	UniSTS	GRCm37
Celera	5	139,952,801 - 139,953,780	UniSTS
Celera	16	38,289,438 - 38,289,942	UniSTS
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	6	C3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	6	34.95	UniSTS
cM Map	5	80.0	UniSTS

PMC240671P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,808 - 142,904,190	UniSTS	GRCm38
MGSCv37	5	143,665,487 - 143,665,869	UniSTS	GRCm37
Celera	5	139,952,225 - 139,952,607	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC23951P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,929 - 37,883,401	UniSTS	GRCm38
GRCm38	5	142,904,158 - 142,904,727	UniSTS	GRCm38
MGSCv37	16	37,883,015 - 37,883,487	UniSTS	GRCm37
MGSCv37	5	143,665,837 - 143,666,406	UniSTS	GRCm37
Celera	5	139,952,575 - 139,953,144	UniSTS
Celera	16	38,289,597 - 38,290,069	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC24561P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	11	E2	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC24644P4

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	17	8,566,598 - 8,566,840	UniSTS	GRCm38
GRCm38	5	142,905,256 - 142,905,585	UniSTS	GRCm38
MGSCv37	5	143,666,935 - 143,667,264	UniSTS	GRCm37
MGSCv37	17	8,759,463 - 8,759,705	UniSTS	GRCm37
Celera	17	8,612,720 - 8,612,962	UniSTS
Celera	5	139,953,673 - 139,954,002	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC24942P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,651 - 37,882,725	UniSTS	GRCm38
MGSCv37	16	37,882,737 - 37,882,811	UniSTS	GRCm37
Celera	16	38,289,319 - 38,289,393	UniSTS
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC262340P2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,883,276 - 37,883,644	UniSTS	GRCm38
GRCm38	5	142,903,789 - 142,904,382	UniSTS	GRCm38
MGSCv37	16	37,883,362 - 37,883,730	UniSTS	GRCm37
MGSCv37	5	143,665,468 - 143,666,061	UniSTS	GRCm37
Celera	5	139,952,206 - 139,952,799	UniSTS
Celera	16	38,289,944 - 38,290,312	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC275467P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,511 - 142,904,764	UniSTS	GRCm38
MGSCv37	5	143,666,190 - 143,666,443	UniSTS	GRCm37
Celera	5	139,952,928 - 139,953,181	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC30411P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,905,249 - 142,905,656	UniSTS	GRCm38
MGSCv37	5	143,666,928 - 143,667,335	UniSTS	GRCm37
Celera	5	139,953,666 - 139,954,073	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC305683P4

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC33181P2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,883,323 - 37,883,632	UniSTS	GRCm38
GRCm38	5	142,903,801 - 142,904,240	UniSTS	GRCm38
MGSCv37	16	37,883,409 - 37,883,718	UniSTS	GRCm37
MGSCv37	5	143,665,480 - 143,665,919	UniSTS	GRCm37
Celera	5	139,952,218 - 139,952,657	UniSTS
Celera	16	38,289,991 - 38,290,300	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC33279P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC340938P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,181 - 142,904,434	UniSTS	GRCm38
GRCm38	X	146,096,045 - 146,096,204	UniSTS	GRCm38
MGSCv37	5	143,665,860 - 143,666,113	UniSTS	GRCm37
MGSCv37	X	142,530,588 - 142,530,747	UniSTS	GRCm37
Celera	X	130,045,168 - 130,045,327	UniSTS
Celera	5	139,952,598 - 139,952,851	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	X	F2	UniSTS
cM Map	5	80.0	UniSTS

PMC340938P4

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,181 - 142,904,402	UniSTS	GRCm38
MGSCv37	5	143,665,860 - 143,666,081	UniSTS	GRCm37
Celera	5	139,952,598 - 139,952,819	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC350549P3

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,736 - 142,905,343	UniSTS	GRCm38
MGSCv37	5	143,666,415 - 143,667,022	UniSTS	GRCm37
Celera	5	139,953,153 - 139,953,760	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC356969P12

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC37512P3

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,507 - 142,904,756	UniSTS	GRCm38
MGSCv37	5	143,666,186 - 143,666,435	UniSTS	GRCm37
Celera	5	139,952,924 - 139,953,173	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC84911P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC85361P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC85795P4

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,672 - 37,883,150	UniSTS	GRCm38
GRCm38	5	142,904,508 - 142,905,461	UniSTS	GRCm38
MGSCv37	16	37,882,758 - 37,883,236	UniSTS	GRCm37
MGSCv37	5	143,666,187 - 143,667,140	UniSTS	GRCm37
Celera	5	139,952,925 - 139,953,878	UniSTS
Celera	16	38,289,340 - 38,289,818	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC87052P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,883,210 - 37,883,637	UniSTS	GRCm38
GRCm38	5	142,903,796 - 142,904,448	UniSTS	GRCm38
MGSCv37	16	37,883,296 - 37,883,723	UniSTS	GRCm37
MGSCv37	5	143,665,475 - 143,666,127	UniSTS	GRCm37
Celera	16	38,289,878 - 38,290,305	UniSTS
Celera	5	139,952,213 - 139,952,865	UniSTS
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	8	E2	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS
cM Map	8	67.0	UniSTS

PMC96811P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,916 - 37,883,474	UniSTS	GRCm38
GRCm38	5	142,904,085 - 142,904,740	UniSTS	GRCm38
MGSCv37	16	37,883,002 - 37,883,560	UniSTS	GRCm37
MGSCv37	5	143,665,764 - 143,666,419	UniSTS	GRCm37
Celera	5	139,952,502 - 139,953,157	UniSTS
Celera	16	38,289,584 - 38,290,142	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC97307P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,631 - 142,905,450	UniSTS	GRCm38
MGSCv37	5	143,666,310 - 143,667,129	UniSTS	GRCm37
Celera	5	139,953,048 - 139,953,867	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC97445P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,703 - 142,905,683	UniSTS	GRCm38
MGSCv37	5	143,666,382 - 143,667,362	UniSTS	GRCm37
Celera	5	139,953,120 - 139,954,100	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC97559P2

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC97568P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	11	E2	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC98352P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,830 - 142,904,630	UniSTS	GRCm38
MGSCv37	5	143,665,509 - 143,666,309	UniSTS	GRCm37
Celera	5	139,952,247 - 139,953,047	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC99880P2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

RI01350

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,869 - 37,883,053	UniSTS	GRCm38
MGSCv37	16	37,882,955 - 37,883,139	UniSTS	GRCm37
Celera	16	38,289,537 - 38,289,721	UniSTS
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC109669P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,883,030 - 37,883,630	UniSTS	GRCm38
GRCm38	5	142,903,803 - 142,904,628	UniSTS	GRCm38
MGSCv37	16	37,883,116 - 37,883,716	UniSTS	GRCm37
MGSCv37	5	143,665,482 - 143,666,307	UniSTS	GRCm37
Celera	5	139,952,220 - 139,953,045	UniSTS
Celera	16	38,289,698 - 38,290,298	UniSTS
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC117352P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,654 - 37,882,813	UniSTS	GRCm38
GRCm38	5	142,905,320 - 142,905,479	UniSTS	GRCm38
MGSCv37	5	143,666,999 - 143,667,158	UniSTS	GRCm37
MGSCv37	16	37,882,740 - 37,882,899	UniSTS	GRCm37
Celera	5	139,953,737 - 139,953,896	UniSTS
Celera	16	38,289,322 - 38,289,481	UniSTS
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	6	C3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	6	34.95	UniSTS
cM Map	5	80.0	UniSTS

PMC125678P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC154439P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,935 - 37,883,374	UniSTS	GRCm38
GRCm38	5	142,904,189 - 142,904,721	UniSTS	GRCm38
MGSCv37	16	37,883,021 - 37,883,460	UniSTS	GRCm37
MGSCv37	5	143,665,868 - 143,666,400	UniSTS	GRCm37
Celera	5	139,952,606 - 139,953,138	UniSTS
Celera	16	38,289,603 - 38,290,042	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC156124P2

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	11	E2	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC193670P1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	6	C3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS
cM Map	6	34.95	UniSTS

PMC209527P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,503 - 142,905,456	UniSTS	GRCm38
MGSCv37	5	143,666,182 - 143,667,135	UniSTS	GRCm37
Celera	5	139,952,920 - 139,953,873	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	8	E2	UniSTS
cM Map	5	80.0	UniSTS
cM Map	8	67.0	UniSTS

PMC24644P5

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,905,256 - 142,905,452	UniSTS	GRCm38
MGSCv37	5	143,666,935 - 143,667,131	UniSTS	GRCm37
Celera	5	139,953,673 - 139,953,869	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC26753P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,903,916 - 142,904,578	UniSTS	GRCm38
MGSCv37	5	143,665,595 - 143,666,257	UniSTS	GRCm37
Celera	5	139,952,333 - 139,952,995	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC317352P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,905,323 - 142,905,662	UniSTS	GRCm38
MGSCv37	5	143,667,002 - 143,667,341	UniSTS	GRCm37
Celera	5	139,953,740 - 139,954,079	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC86032P2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,732 - 37,883,154	UniSTS	GRCm38
GRCm38	5	142,904,504 - 142,905,401	UniSTS	GRCm38
MGSCv37	16	37,882,818 - 37,883,240	UniSTS	GRCm37
MGSCv37	5	143,666,183 - 143,667,080	UniSTS	GRCm37
Celera	5	139,952,921 - 139,953,818	UniSTS
Celera	16	38,289,400 - 38,289,822	UniSTS
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	5	80.0	UniSTS

PMC86650P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,607 - 142,905,448	UniSTS	GRCm38
MGSCv37	5	143,666,286 - 143,667,127	UniSTS	GRCm37
Celera	5	139,953,024 - 139,953,865	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

PMC86716P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,905,356 - 142,905,458	UniSTS	GRCm38
MGSCv37	5	143,667,035 - 143,667,137	UniSTS	GRCm37
Celera	5	139,953,773 - 139,953,875	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS

Actb-rs1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	5	G2	UniSTS
Cytogenetic Map	16	B3	UniSTS
cM Map	16	27.3	UniSTS
cM Map	X	63.0	UniSTS

Acat1

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	9	29.12	UniSTS

Actb

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	142,904,106 - 142,904,719	UniSTS	GRCm38
MGSCv37	5	143,665,785 - 143,666,398	UniSTS	GRCm37
Celera	5	139,952,523 - 139,953,136	UniSTS
Cytogenetic Map	5	G2	UniSTS

Actb

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	16	37,882,740 - 37,882,951	UniSTS	GRCm38
GRCm38	5	142,904,705 - 142,905,393	UniSTS	GRCm38
MGSCv37	16	37,882,826 - 37,883,037	UniSTS	GRCm37
MGSCv37	5	143,666,384 - 143,667,072	UniSTS	GRCm37
Celera	16	38,289,408 - 38,289,619	UniSTS
Celera	5	139,953,122 - 139,953,810	UniSTS
Cytogenetic Map	16	B3	UniSTS
Cytogenetic Map	5	G2	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_007393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB028847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC144818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK075973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK078935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK088287	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK088691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK145191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK145196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK145308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK147787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK149920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150711	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150866	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151297	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151712	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK153461	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK160029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166349	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK177309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK179836	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK180583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK180740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK180898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK184086	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK184228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK184732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK187650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK187727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK189351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK196898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK197508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK198515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK199846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK200180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK200883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK201181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK202772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK203791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK204356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206771	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK208252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK208556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK209954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK212447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK212873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK215935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK216753	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK218610	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK218630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK220069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY618569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC040513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC138611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC138614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE992124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY094883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY155324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY783897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CX211008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF095208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	J04181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M12481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U89400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X03672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X03765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000100497 ⟹ ENSMUSP00000098066

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	142,888,870 - 142,892,509 (-)	Ensembl
GRCm38.p6 Ensembl	5	142,903,115 - 142,906,754 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000106216 ⟹ ENSMUSP00000101823

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	142,890,460 - 142,891,692 (-)	Ensembl
GRCm38.p6 Ensembl	5	142,904,705 - 142,905,937 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000163829 ⟹ ENSMUSP00000132135

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	142,890,427 - 142,892,477 (-)	Ensembl
GRCm38.p6 Ensembl	5	142,904,672 - 142,906,722 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000164765

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	142,890,628 - 142,892,449 (-)	Ensembl
GRCm38.p6 Ensembl	5	142,904,873 - 142,906,694 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000165629

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	142,890,521 - 142,892,427 (-)	Ensembl
GRCm38.p6 Ensembl	5	142,904,766 - 142,906,672 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000167386

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	142,890,150 - 142,892,480 (-)	Ensembl
GRCm38.p6 Ensembl	5	142,904,395 - 142,906,725 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000167721 ⟹ ENSMUSP00000127663

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	142,889,256 - 142,892,457 (-)	Ensembl
GRCm38.p6 Ensembl	5	142,903,501 - 142,906,702 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000171419 ⟹ ENSMUSP00000130611

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	142,890,106 - 142,891,576 (-)	Ensembl
GRCm38.p6 Ensembl	5	142,904,351 - 142,905,821 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000196997

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	142,888,989 - 142,889,409 (-)	Ensembl
GRCm38.p6 Ensembl	5	142,903,234 - 142,903,654 (-)	Ensembl

RefSeq Acc Id:

NM_007393 ⟹ NP_031419

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	142,888,870 - 142,892,509 (-)	NCBI
GRCm38	5	142,903,115 - 142,906,754 (-)	NCBI
MGSCv37	5	143,664,795 - 143,668,403 (-)	RGD
Celera	5	139,951,533 - 139,955,141 (-)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

TATAAAACCCGGCGGCGCAACGCGCAGCCACTGTCGAGTCGCGTCCACCCGCGAGCACAGCTTC
TTTGCAGCTCCTTCGTTGCCGGTCCACACCCGCCACCAGTTCGCCATGGATGACGATATCGCTG
CGCTGGTCGTCGACAACGGCTCCGGCATGTGCAAAGCCGGCTTCGCGGGCGACGATGCTCCCCG
GGCTGTATTCCCCTCCATCGTGGGCCGCCCTAGGCACCAGGGTGTGATGGTGGGAATGGGTCAG
AAGGACTCCTATGTGGGTGACGAGGCCCAGAGCAAGAGAGGTATCCTGACCCTGAAGTACCCCA
TTGAACATGGCATTGTTACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAA
TGAGCTGCGTGTGGCCCCTGAGGAGCACCCTGTGCTGCTCACCGAGGCCCCCCTGAACCCTAAG
GCCAACCGTGAAAAGATGACCCAGATCATGTTTGAGACCTTCAACACCCCAGCCATGTACGTAG
CCATCCAGGCTGTGCTGTCCCTGTATGCCTCTGGTCGTACCACAGGCATTGTGATGGACTCCGG
AGACGGGGTCACCCACACTGTGCCCATCTACGAGGGCTATGCTCTCCCTCACGCCATCCTGCGT
CTGGACCTGGCTGGCCGGGACCTGACAGACTACCTCATGAAGATCCTGACCGAGCGTGGCTACA
GCTTCACCACCACAGCTGAGAGGGAAATCGTGCGTGACATCAAAGAGAAGCTGTGCTATGTTGC
TCTAGACTTCGAGCAGGAGATGGCCACTGCCGCATCCTCTTCCTCCCTGGAGAAGAGCTATGAG
CTGCCTGACGGCCAGGTCATCACTATTGGCAACGAGCGGTTCCGATGCCCTGAGGCTCTTTTCC
AGCCTTCCTTCTTGGGTATGGAATCCTGTGGCATCCATGAAACTACATTCAATTCCATCATGAA
GTGTGACGTTGACATCCGTAAAGACCTCTATGCCAACACAGTGCTGTCTGGTGGTACCACCATG
TACCCAGGCATTGCTGACAGGATGCAGAAGGAGATTACTGCTCTGGCTCCTAGCACCATGAAGA
TCAAGATCATTGCTCCTCCTGAGCGCAAGTACTCTGTGTGGATCGGTGGCTCCATCCTGGCCTC
ACTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTACGATGAGTCCGGCCCCTCCATC
GTGCACCGCAAGTGCTTCTAGGCGGACTGTTACTGAGCTGCGTTTTACACCCTTTCTTTGACAA
AACCTAACTTGCGCAGAAAAAAAAAAAATAAGAGACAACATTGGCATGGCTTTGTTTTTTTAAA
TTTTTTTTAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGTTTTTTTGTTTTGTTTTGGC
GCTTTTGACTCAGGATTTAAAAACTGGAACGGTGAAGGCGACAGCAGTTGGTTGGAGCAAACAT
CCCCCAAAGTTCTACAAATGTGGCTGAGGACTTTGTACATTGTTTTGTTTTTTTTTTTTTTTGG
TTTTGTCTTTTTTTAATAGTCATTCCAAGTATCCATGAAATAAGTGGTTACAGGAAGTCCCTCA
CCCTCCCAAAAGCCACCCCCACTCCTAAGAGGAGGATGGTCGCGTCCATGCCCTGAGTCCACCC
CGGGGAAGGTGACAGCATTGCTTCTGTGTAAATTATGTACTGCAAAAATTTTTTTAAATCTTCC
GCCTTAATACTTCATTTTTGTTTTTAATTTCTGAATGGCCCAGGTCTGAGGCCTCCCTTTTTTT
TGTCCCCCCAACTTGATGTATGAAGGCTTTGGTCTCCCTGGGAGGGGGTTGAGGTGTTGAGGCA
GCCAGGGCTGGCCTGTACACTGACTTGAGACCAATAAAAGTGCACACCTTACCTTACACAAACA
AAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_031419	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA37144	(Get FASTA)	NCBI Sequence Viewer
	AAA37170	(Get FASTA)	NCBI Sequence Viewer
	AAC36507	(Get FASTA)	NCBI Sequence Viewer
	AAI38612	(Get FASTA)	NCBI Sequence Viewer
	AAI38615	(Get FASTA)	NCBI Sequence Viewer
	AAT40730	(Get FASTA)	NCBI Sequence Viewer
	ABL01512	(Get FASTA)	NCBI Sequence Viewer
	BAB40317	(Get FASTA)	NCBI Sequence Viewer
	BAC40507	(Get FASTA)	NCBI Sequence Viewer
	BAE26283	(Get FASTA)	NCBI Sequence Viewer
	BAE26288	(Get FASTA)	NCBI Sequence Viewer
	BAE26359	(Get FASTA)	NCBI Sequence Viewer
	BAE28137	(Get FASTA)	NCBI Sequence Viewer
	BAE29648	(Get FASTA)	NCBI Sequence Viewer
	BAE29655	(Get FASTA)	NCBI Sequence Viewer
	BAE29658	(Get FASTA)	NCBI Sequence Viewer
	BAE29789	(Get FASTA)	NCBI Sequence Viewer
	BAE29910	(Get FASTA)	NCBI Sequence Viewer
	BAE29918	(Get FASTA)	NCBI Sequence Viewer
	BAE29928	(Get FASTA)	NCBI Sequence Viewer
	BAE30031	(Get FASTA)	NCBI Sequence Viewer
	BAE30144	(Get FASTA)	NCBI Sequence Viewer
	BAE30152	(Get FASTA)	NCBI Sequence Viewer
	BAE30164	(Get FASTA)	NCBI Sequence Viewer
	BAE30169	(Get FASTA)	NCBI Sequence Viewer
	BAE30187	(Get FASTA)	NCBI Sequence Viewer
	BAE30199	(Get FASTA)	NCBI Sequence Viewer
	BAE30218	(Get FASTA)	NCBI Sequence Viewer
	BAE30264	(Get FASTA)	NCBI Sequence Viewer
	BAE30280	(Get FASTA)	NCBI Sequence Viewer
	BAE30326	(Get FASTA)	NCBI Sequence Viewer
	BAE30357	(Get FASTA)	NCBI Sequence Viewer
	BAE30358	(Get FASTA)	NCBI Sequence Viewer
	BAE30366	(Get FASTA)	NCBI Sequence Viewer
	BAE30406	(Get FASTA)	NCBI Sequence Viewer
	BAE30426	(Get FASTA)	NCBI Sequence Viewer
	BAE30591	(Get FASTA)	NCBI Sequence Viewer
	BAE30781	(Get FASTA)	NCBI Sequence Viewer
	BAE30828	(Get FASTA)	NCBI Sequence Viewer
	BAE30859	(Get FASTA)	NCBI Sequence Viewer
	BAE30863	(Get FASTA)	NCBI Sequence Viewer
	BAE30900	(Get FASTA)	NCBI Sequence Viewer
	BAE30908	(Get FASTA)	NCBI Sequence Viewer
	BAE30933	(Get FASTA)	NCBI Sequence Viewer
	BAE31046	(Get FASTA)	NCBI Sequence Viewer
	BAE31215	(Get FASTA)	NCBI Sequence Viewer
	BAE31245	(Get FASTA)	NCBI Sequence Viewer
	BAE31340	(Get FASTA)	NCBI Sequence Viewer
	BAE31359	(Get FASTA)	NCBI Sequence Viewer
	BAE31388	(Get FASTA)	NCBI Sequence Viewer
	BAE31537	(Get FASTA)	NCBI Sequence Viewer
	BAE32013	(Get FASTA)	NCBI Sequence Viewer
	BAE35350	(Get FASTA)	NCBI Sequence Viewer
	BAE35412	(Get FASTA)	NCBI Sequence Viewer
	BAE35572	(Get FASTA)	NCBI Sequence Viewer
	BAE38723	(Get FASTA)	NCBI Sequence Viewer
	BAE38810	(Get FASTA)	NCBI Sequence Viewer
	BAE39265	(Get FASTA)	NCBI Sequence Viewer
	BAE39847	(Get FASTA)	NCBI Sequence Viewer
	BAE39957	(Get FASTA)	NCBI Sequence Viewer
	CAA27307	(Get FASTA)	NCBI Sequence Viewer
	CAA27396	(Get FASTA)	NCBI Sequence Viewer
	EDL19081	(Get FASTA)	NCBI Sequence Viewer
	P60710	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_031419 ⟸ NM_007393

- UniProtKB:

Q6ZWM3 (UniProtKB/Swiss-Prot), P60710 (UniProtKB/Swiss-Prot), B2RRX1 (UniProtKB/TrEMBL), A0A6P5PSI5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
TPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI
LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFR
CPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL
APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

hide sequence

RefSeq Acc Id:

ENSMUSP00000132135 ⟸ ENSMUST00000163829

RefSeq Acc Id:

ENSMUSP00000130611 ⟸ ENSMUST00000171419

RefSeq Acc Id:

ENSMUSP00000101823 ⟸ ENSMUST00000106216

RefSeq Acc Id:

ENSMUSP00000098066 ⟸ ENSMUST00000100497

RefSeq Acc Id:

ENSMUSP00000127663 ⟸ ENSMUST00000167721

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P60710-F1-model_v2	AlphaFold	P60710	1-375	view protein structure

Promoters

RGD ID:

6888648

Promoter ID:

EPDNEW_M7775

Type:

initiation region

Name:

Actb_1

Description:

Mus musculus actin, beta , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	142,906,725 - 142,906,785	EPDNEW

RGD ID:

6836989

Promoter ID:

MM_KWN:44716

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000100497

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	143,666,896 - 143,668,322 (-)	MPROMDB

RGD ID:

6836988

Promoter ID:

MM_KWN:44717

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, Kidney, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000031564

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	143,668,331 - 143,669,357 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:87904	AgrOrtholog
Ensembl Genes	ENSMUSG00000029580	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000098066	ENTREZGENE
	ENSMUSP00000098066.5	UniProtKB/Swiss-Prot
	ENSMUSP00000101823.3	UniProtKB/TrEMBL
	ENSMUSP00000127663.2	UniProtKB/TrEMBL
	ENSMUSP00000130611.2	UniProtKB/TrEMBL
	ENSMUSP00000132135.2	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000100497	ENTREZGENE
	ENSMUST00000100497.11	UniProtKB/Swiss-Prot
	ENSMUST00000106216.3	UniProtKB/TrEMBL
	ENSMUST00000163829.2	UniProtKB/TrEMBL
	ENSMUST00000167721.8	UniProtKB/TrEMBL
	ENSMUST00000171419.8	UniProtKB/TrEMBL
Gene3D-CATH	3.30.420.40	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Actin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Actin/actin-like_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Actin_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ATPase_NBD	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:11461	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:87904	ENTREZGENE
NCBI Gene	11461	ENTREZGENE
PANTHER	ACTIN	UniProtKB/TrEMBL
	ACTIN, CYTOPLASMIC 1	UniProtKB/TrEMBL
	ACTIN, CYTOPLASMIC 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ACTIN-42A-RELATED	UniProtKB/TrEMBL
	PTHR11937	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Actin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Actb	PhenoGen
PRINTS	ACTIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	ACTINS_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ACTINS_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ACTINS_ACT_LIKE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	ACTIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF53067	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A6P5PSI5	ENTREZGENE
	A1E281_MOUSE	UniProtKB/TrEMBL
	ACTB_MOUSE	UniProtKB/Swiss-Prot
	B2RRX1	ENTREZGENE, UniProtKB/TrEMBL
	E9Q1F2_MOUSE	UniProtKB/TrEMBL
	E9Q2D1_MOUSE	UniProtKB/TrEMBL
	E9Q5F4_MOUSE	UniProtKB/TrEMBL
	E9Q606_MOUSE	UniProtKB/TrEMBL
	O89054_MOUSE	UniProtKB/TrEMBL
	P60710	ENTREZGENE
	Q3TIJ9_MOUSE	UniProtKB/TrEMBL
	Q3U5R4_MOUSE	UniProtKB/TrEMBL
	Q3U804_MOUSE	UniProtKB/TrEMBL
	Q3U939_MOUSE	UniProtKB/TrEMBL
	Q3UA89_MOUSE	UniProtKB/TrEMBL
	Q3UAA9_MOUSE	UniProtKB/TrEMBL
	Q3UAF6_MOUSE	UniProtKB/TrEMBL
	Q3UAF7_MOUSE	UniProtKB/TrEMBL
	Q3UBP6_MOUSE	UniProtKB/TrEMBL
	Q3UBQ4_MOUSE	UniProtKB/TrEMBL
	Q3UCF8_MOUSE	UniProtKB/TrEMBL
	Q3UGS0_MOUSE	UniProtKB/TrEMBL
	Q61276_MOUSE	UniProtKB/TrEMBL
	Q6IWE2_MOUSE	UniProtKB/TrEMBL
	Q6ZWM3	ENTREZGENE
	Q99NC5_MOUSE	UniProtKB/TrEMBL
UniProt Secondary	P02570	UniProtKB/Swiss-Prot
	P70514	UniProtKB/Swiss-Prot
	P99021	UniProtKB/Swiss-Prot
	Q11211	UniProtKB/Swiss-Prot
	Q3TI89	UniProtKB/Swiss-Prot
	Q3TVP6	UniProtKB/Swiss-Prot
	Q64316	UniProtKB/Swiss-Prot
	Q6ZWM3	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

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RGD Manual Annotations

Imported Annotations - KEGG (archival)

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