AQP4 (aquaporin 4) - Rat Genome Database

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Gene: AQP4 (aquaporin 4) Homo sapiens
Analyze
Symbol: AQP4
Name: aquaporin 4
RGD ID: 735519
HGNC Page HGNC:637
Description: Enables identical protein binding activity and water channel activity. Involved in several processes, including cellular response to type II interferon; intracellular water homeostasis; and protein homotetramerization. Located in cytoplasm; external side of plasma membrane; and sarcolemma. Implicated in several diseases, including Meniere's disease; megalencephalic leukoencephalopathy with subcortical cysts; optic nerve disease (multiple); temporal lobe epilepsy; and transverse myelitis. Biomarker of several diseases, including Alpers-Huttenlocher syndrome; Meniere's disease; central pontine myelinolysis; cerebral amyloid angiopathy; and thymoma.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: AQP-4; aquaporin 4 isoform delta4; aquaporin type4; aquaporin-4; hAQP4; HMIWC2; mercurial-insensitive water channel; MGC22454; MIWC; MLC4; WCH4
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381826,852,038 - 26,865,803 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1826,852,043 - 26,865,771 (-)EnsemblGRCh38hg38GRCh38
GRCh371824,432,002 - 24,445,767 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361822,686,005 - 22,699,714 (-)NCBINCBI36Build 36hg18NCBI36
Build 341822,686,007 - 22,699,714NCBI
Celera1821,242,174 - 21,255,883 (-)NCBICelera
Cytogenetic Map18q11.2NCBI
HuRef1821,281,696 - 21,295,401 (-)NCBIHuRef
CHM1_11824,359,750 - 24,373,454 (-)NCBICHM1_1
T2T-CHM13v2.01827,046,091 - 27,059,856 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(S)-nicotine  (ISO)
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (EXP,ISO)
1,3-dinitrobenzene  (ISO)
1-(5-isoquinolinesulfonyl)-2-methylpiperazine  (ISO)
1-naphthyl isothiocyanate  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4,6-trinitrobenzenesulfonic acid  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methoxy-17beta-estradiol  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
5-(2-methylpiperazine-1-sulfonyl)isoquinoline  (ISO)
acetic acid  (ISO)
acrylamide  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
alpha-D-galactose  (ISO)
alpha-Zearalanol  (ISO)
ammonia  (EXP)
ammonium chloride  (ISO)
arsenous acid  (EXP)
atrazine  (ISO)
benazepril  (ISO)
benzo[a]pyrene  (EXP,ISO)
Benzo[ghi]perylene  (ISO)
betamethasone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
bisphenol F  (ISO)
calcidiol  (ISO)
cannabidiol  (EXP)
carbon nanotube  (ISO)
CGP 52608  (EXP)
chlorpyrifos  (ISO)
choline  (ISO)
clofibrate  (ISO)
Cuprizon  (ISO)
cycloheximide  (ISO)
D-glucose  (ISO)
decabromodiphenyl ether  (ISO)
desferrioxamine B  (ISO)
Diallyl sulfide  (ISO)
diarsenic trioxide  (EXP)
diprotium oxide  (ISO)
diquat  (ISO)
doxorubicin  (ISO)
ethanol  (ISO)
folic acid  (ISO)
furan  (ISO)
galactose  (ISO)
gentamycin  (ISO)
glucose  (ISO)
gold atom  (EXP)
gold(0)  (EXP)
hydrogen chloride  (ISO)
inulin  (ISO)
iron atom  (ISO)
iron dichloride  (ISO)
iron(0)  (ISO)
iron(III) citrate  (EXP)
L-methionine  (ISO)
lansoprazole  (ISO)
lead(0)  (EXP)
lidocaine  (ISO)
lipopolysaccharide  (ISO)
lycopene  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
mercury dichloride  (ISO)
methylmercury chloride  (EXP,ISO)
morphine  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
N-Nitrosopyrrolidine  (EXP)
nicotine  (ISO)
nitrofen  (ISO)
O-methyleugenol  (EXP)
olanzapine  (EXP)
ozone  (EXP)
palmitoyl ethanolamide  (EXP)
paracetamol  (ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
rac-lactic acid  (ISO)
reactive oxygen species  (ISO)
rifampicin  (EXP)
SB 203580  (ISO)
SB-239063  (ISO)
senecionine  (ISO)
sodium arsenite  (ISO)
Soman  (ISO)
sulforaphane  (ISO)
terbutaline  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
tetraphene  (ISO)
thalidomide  (ISO)
thioacetamide  (ISO)
thiourea  (ISO)
titanium dioxide  (ISO)
toluene  (ISO)
triazines  (ISO)
trichloroethene  (ISO)
trichostatin A  (EXP)
Triptolide  (ISO)
valproic acid  (EXP)
valsartan  (ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
water  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Quantitation of brain edema and localisation of aquaporin 4 expression in relation to susceptibility to experimental cerebral malaria. Ampawong S, etal., Int J Clin Exp Pathol. 2011 Aug 15;4(6):566-74. Epub 2011 Jul 23.
2. Hypoalgesia in mice lacking aquaporin-4 water channels. Bao F, etal., Brain Res Bull. 2010 Nov 20;83(6):298-303. doi: 10.1016/j.brainresbull.2010.08.015. Epub 2010 Sep 22.
3. Changes in the astrocytic aquaporin-4 and inwardly rectifying potassium channel expression in the brain of the amyotrophic lateral sclerosis SOD1(G93A) rat model. Bataveljic D, etal., Glia. 2012 Dec;60(12):1991-2003. doi: 10.1002/glia.22414. Epub 2012 Sep 14.
4. [The effects of ketamine pretreated on cerebral edema and AQP4 expression after transient focal cerebral ischemia/reperfusion in rats]. Cai SN and Zhu SM, Zhonghua Yi Xue Za Zhi. 2010 Jun 15;90(23):1648-51.
5. Molecular analysis of aquaporin genes 1 to 4 in patients with Meniere's disease. Candreia C, etal., Cell Physiol Biochem. 2010;26(4-5):787-92. doi: 10.1159/000322346. Epub 2010 Oct 29.
6. Aquaporin-4 water channel expression by thymoma of patients with and without myasthenia gravis. Chan KH, etal., J Neuroimmunol. 2010 Oct 8;227(1-2):178-84. Epub 2010 Aug 21.
7. Novel role of aquaporin-4 in CD4+ CD25+ T regulatory cell development and severity of Parkinson's disease. Chi Y, etal., Aging Cell. 2011 Jun;10(3):368-82. doi: 10.1111/j.1474-9726.2011.00677.x. Epub 2011 Mar 22.
8. Age-related hearing loss: aquaporin 4 gene expression changes in the mouse cochlea and auditory midbrain. Christensen N, etal., Brain Res. 2009 Feb 9;1253:27-34. doi: 10.1016/j.brainres.2008.11.070. Epub 2008 Dec 3.
9. Aquaporin 4 knockdown exacerbates streptozotocin-induced diabetic retinopathy through aggravating inflammatory response. Cui B, etal., Exp Eye Res. 2012 May;98:37-43. doi: 10.1016/j.exer.2012.02.013. Epub 2012 Mar 16.
10. Alleviation of brain injury by applying TGN-020 in the supraoptic nucleus via inhibiting vasopressin neurons in rats of focal ischemic stroke. Cui D, etal., Life Sci. 2021 Jan 1;264:118683. doi: 10.1016/j.lfs.2020.118683. Epub 2020 Oct 28.
11. Anti-aquaporin-4 antibodies in the context of assorted immune-mediated diseases. Dellavance A, etal., Eur J Neurol. 2011 Jul 19. doi: 10.1111/j.1468-1331.2011.03479.x.
12. Changes in ocular aquaporin-4 (AQP4) expression following retinal injury. Dibas A, etal., Mol Vis. 2008 Sep 25;14:1770-83.
13. Changes in ocular aquaporin expression following optic nerve crush. Dibas A, etal., Mol Vis. 2010 Mar 3;16:330-40.
14. Brain expression of the water channels Aquaporin-1 and -4 in mice with acute liver injury, hyperammonemia and brain edema. Eefsen M, etal., Metab Brain Dis. 2010 Sep;25(3):315-23. Epub 2010 Oct 12.
15. Anti-aquaporin-4 IgG in Patients Presenting with Unilateral Optic Neuritis: A Cohort Study. Etemadifar M, etal., Int J Prev Med. 2012 Sep;3(9):612-5.
16. Altered expression of aquaporins 1 and 4 coincides with neurodegenerative events in retinas of spontaneously diabetic Torii rats. Fukuda M, etal., Exp Eye Res. 2010 Jan;90(1):17-25. Epub 2009 Sep 11.
17. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
18. Temporal profiles of aquaporin 4 expression and astrocyte response in the process of brain damage in fat embolism model in rats. Gohara T, etal., J Anesth. 2010 Apr;24(2):225-33. Epub 2010 Jan 29.
19. Rapamycin alleviates brain edema after focal cerebral ischemia reperfusion in rats. Guo W, etal., Immunopharmacol Immunotoxicol. 2014 Jun;36(3):211-23. doi: 10.3109/08923973.2014.913616. Epub 2014 Apr 29.
20. Variants of the genes encoding AQP4 and Kir4.1 are associated with subgroups of patients with temporal lobe epilepsy. Heuser K, etal., Epilepsy Res. 2010 Jan;88(1):55-64. Epub 2009 Oct 28.
21. Retinal ectopias and mechanically weakened basement membrane in a mouse model of muscle-eye-brain (MEB) disease congenital muscular dystrophy. Hu H, etal., Mol Vis. 2010 Jul 28;16:1415-28.
22. The relationship between aquaporin-4 expression and blood-brain and spinal cord barrier permeability following experimental autoimmune encephalomyelitis in the rat. Huang XN, etal., Anat Rec (Hoboken). 2011 Jan;294(1):46-54. doi: 10.1002/ar.21286. Epub 2010 Nov 12.
23. Pretreatment with a novel aquaporin 4 inhibitor, TGN-020, significantly reduces ischemic cerebral edema. Igarashi H, etal., Neurol Sci. 2011 Feb;32(1):113-6. Epub 2010 Oct 6.
24. Immunohistochemical localization and mRNA expression of aquaporins in the macula utriculi of patients with Meniere's disease and acoustic neuroma. Ishiyama G, etal., Cell Tissue Res. 2010 Jun;340(3):407-19. doi: 10.1007/s00441-010-0975-7. Epub 2010 May 12.
25. Molecular characterization of an aquaporin cDNA from brain: candidate osmoreceptor and regulator of water balance. Jung JS, etal., Proc Natl Acad Sci U S A 1994 Dec 20;91(26):13052-6.
26. Relationship between NMO-antibody and anti-MOG antibody in optic neuritis. Kezuka T, etal., J Neuroophthalmol. 2012 Jun;32(2):107-10. doi: 10.1097/WNO.0b013e31823c9b6c.
27. Astroglial loss and edema formation in the rat piriform cortex and hippocampus following pilocarpine-induced status epilepticus. Kim JE, etal., J Comp Neurol. 2010 Nov 15;518(22):4612-28.
28. Protective role of aquaporin-4 water channels after contusion spinal cord injury. Kimura A, etal., Ann Neurol. 2010 Jun;67(6):794-801.
29. Longitudinally extensive transverse myelitis with and without aquaporin 4 antibodies. Kitley J, etal., JAMA Neurol. 2013 Nov;70(11):1375-81. doi: 10.1001/jamaneurol.2013.3890.
30. Aquaporins in the kidney. Kwon TH, etal., Handb Exp Pharmacol. 2009;(190):95-132. doi: 10.1007/978-3-540-79885-9_5.
31. Decreased expression of the glial water channel aquaporin-4 in the intrahippocampal kainic acid model of epileptogenesis. Lee DJ, etal., Exp Neurol. 2012 May;235(1):246-55. doi: 10.1016/j.expneurol.2012.02.002. Epub 2012 Feb 14.
32. IgG marker of optic-spinal multiple sclerosis binds to the aquaporin-4 water channel. Lennon VA, etal., J Exp Med. 2005 Aug 15;202(4):473-7. Epub 2005 Aug 8.
33. Impaired hearing in mice lacking aquaporin-4 water channels. Li J and Verkman AS, J Biol Chem 2001 Aug 17;276(33):31233-7. Epub 2001 Jun 13.
34. Greatly attenuated experimental autoimmune encephalomyelitis in aquaporin-4 knockout mice. Li L, etal., BMC Neurosci. 2009 Aug 6;10:94.
35. The Involvement of Aquaporin-4 in the Interstitial Fluid Drainage Impairment Following Subarachnoid Hemorrhage. Liu E, etal., Front Aging Neurosci. 2021 Jan 26;12:611494. doi: 10.3389/fnagi.2020.611494. eCollection 2020.
36. Arginine-vasopressin V1 but not V2 receptor antagonism modulates infarct volume, brain water content, and aquaporin-4 expression following experimental stroke. Liu X, etal., Neurocrit Care. 2010 Feb;12(1):124-31.
37. Calcitonin gene-related peptide prevents blood-brain barrier injury and brain edema induced by focal cerebral ischemia reperfusion. Liu Z, etal., Regul Pept. 2011 Nov 10;171(1-3):19-25. Epub 2011 Jun 28.
38. [The effect of AQP4 gene on the activation of retinal glial cells in chronic high intraocular pressure mice]. Luo SS, etal., Zhonghua Yan Ke Za Zhi. 2012 Jul;48(7):598-603.
39. Preliminary study on the association of AQP4 promoter polymorphism with anti-aquaporin-4 antibody positivity in southern Han Chinese patients with idiopathic demyelinating disorders of central nervous system. Mai W, etal., J Neuroimmunol. 2013 Feb 15;255(1-2):75-80. doi: 10.1016/j.jneuroim.2012.10.004. Epub 2012 Oct 29.
40. Sulphoraphane enhances aquaporin-4 expression and decreases spinal cord oedema following spinal cord injury. Mao L, etal., Brain Inj. 2011;25(3):300-6. Epub 2011 Jan 31.
41. Aquaporin 4 regulation during acute and long-term experimental Herpes simplex virus encephalitis. Martinez Torres FJ, etal., J Neurovirol. 2007;13(1):38-46.
42. Aquaporin-4 astrocytopathy in Balo's disease. Matsuoka T, etal., Acta Neuropathol. 2010 Nov;120(5):651-60. Epub 2010 Aug 3.
43. Aquaporin expression in the brains of patients with or without cerebral amyloid angiopathy. Moftakhar P, etal., J Neuropathol Exp Neurol. 2010 Dec;69(12):1201-9.
44. Aquaporin expression in blood-retinal barrier cells during experimental autoimmune uveitis. Motulsky E, etal., Mol Vis. 2010 Apr 3;16:602-10.
45. Transcriptional profiling of spinal cord injury-induced central neuropathic pain. Nesic O, etal., J Neurochem. 2005 Nov;95(4):998-1014. Epub 2005 Oct 10.
46. Aquaporin-4 overexpression in rat ALS model. Nicaise C, etal., Anat Rec (Hoboken). 2009 Feb;292(2):207-13.
47. Aquaporin-4 gene disruption in mice reduces brain swelling and mortality in pneumococcal meningitis. Papadopoulos MC and Verkman AS, J Biol Chem. 2005 Apr 8;280(14):13906-12. Epub 2005 Feb 4.
48. Expression of aquaporin 1 and 4 in a congenital hydrocephalus rat model. Paul L, etal., Neurosurgery. 2011 Feb;68(2):462-73.
49. Experimental autoimmune encephalomyelitis (EAE) IN C57Bl/6 mice is not associated with astrogliosis. Pham H, etal., J Neuroimmunol. 2011 Mar;232(1-2):51-62. Epub 2010 Nov 6.
50. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
51. Evidence of aquaporin involvement in human central pontine myelinolysis. Popescu BF, etal., Acta Neuropathol Commun. 2013 Jul 25;1(1):40. doi: 10.1186/2051-5960-1-40.
52. Loss of AQP4 polarized localization with loss of beta-dystroglycan immunoreactivity may induce brain edema following intracerebral hemorrhage. Qiu GP, etal., Neurosci Lett. 2015 Feb 19;588:42-8. doi: 10.1016/j.neulet.2014.12.053. Epub 2014 Dec 27.
53. Brain aquaporin-4 in experimental acute liver failure. Rama Rao KV, etal., J Neuropathol Exp Neurol. 2010 Sep;69(9):869-79.
54. Involvement of antibody-dependent cell-mediated cytotoxicity in inflammatory demyelination in a mouse model of neuromyelitis optica. Ratelade J, etal., Acta Neuropathol. 2013 Nov;126(5):699-709. doi: 10.1007/s00401-013-1172-z. Epub 2013 Aug 31.
55. Effects of intravitreal triamcinolone acetonide on retinal gene expression in a rat model of central retinal vein occlusion. Rehak M, etal., Graefes Arch Clin Exp Ophthalmol. 2011 Aug;249(8):1175-83. Epub 2011 Apr 13.
56. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
57. Intra-cerebral injection of neuromyelitis optica immunoglobulin G and human complement produces neuromyelitis optica lesions in mice. Saadoun S, etal., Brain. 2010 Feb;133(Pt 2):349-61. Epub 2010 Jan 4.
58. [Deficiency of water channel AQP4 aggravates NMDA-induced brain injury in mice]. Shi WZ, etal., Zhejiang Da Xue Xue Bao Yi Xue Ban. 2011 Mar;40(2):145-9.
59. Intractable hiccup and nausea in neuromyelitis optica with anti-aquaporin-4 antibody: a herald of acute exacerbations. Takahashi T, etal., J Neurol Neurosurg Psychiatry. 2008 Sep;79(9):1075-8. doi: 10.1136/jnnp.2008.145391. Epub 2008 Apr 17.
60. Anti-aquaporin 4 antibody in selected Japanese multiple sclerosis patients with long spinal cord lesions. Tanaka K, etal., Mult Scler. 2007 Aug;13(7):850-5. Epub 2007 Apr 27.
61. Anti-aquaporin 4 antibody in Japanese multiple sclerosis: the presence of optic spinal multiple sclerosis without long spinal cord lesions and anti-aquaporin 4 antibody. Tanaka M, etal., J Neurol Neurosurg Psychiatry. 2007 Sep;78(9):990-2.
62. Critical role of aquaporin-4 (AQP4) in astrocytic Ca2+ signaling events elicited by cerebral edema. Thrane AS, etal., Proc Natl Acad Sci U S A. 2011 Jan 11;108(2):846-51. Epub 2010 Dec 27.
63. [Changes of VEGF and AQPs gene and protein expression in rat brain tissue during hypoxic encephaledema]. Tian YM, etal., Zhongguo Ying Yong Sheng Li Xue Za Zhi. 2011 Feb;27(1):7-11.
64. Expression of aquaporins 1 and 4 in the brain of spontaneously hypertensive rats. Tomassoni D, etal., Brain Res. 2010 Apr 14;1325:155-63. Epub 2010 Feb 12.
65. Effect of decompressive craniectomy on aquaporin-4 expression after lateral fluid percussion injury in rats. Tomura S, etal., J Neurotrauma. 2011 Feb;28(2):237-43.
66. Anti-aquaporin-4 monoclonal antibody blocker therapy for neuromyelitis optica. Tradtrantip L, etal., Ann Neurol. 2012 Mar;71(3):314-22. doi: 10.1002/ana.22657. Epub 2012 Jan 23.
67. Beneficial effect of agmatine on brain apoptosis, astrogliosis, and edema after rat transient cerebral ischemia. Wang CC, etal., BMC Pharmacol. 2010 Sep 6;10:11. doi: 10.1186/1471-2210-10-11.
68. 2-Methoxyestradiol inhibits the up-regulation of AQP4 and AQP1 expression after spinal cord injury. Wang YF, etal., Brain Res. 2011 Jan 25;1370:220-6. Epub 2010 Nov 16.
69. Role of aquaporin-4 in the development of brain oedema in liver failure. Wright G, etal., J Hepatol. 2010 Jul;53(1):91-7. Epub 2010 Apr 1.
70. Time course of upregulation of inflammatory mediators in the hemorrhagic brain in rats: correlation with brain edema. Wu H, etal., Neurochem Int. 2010 Oct;57(3):248-53. Epub 2010 Jun 10.
71. Myelin oligodendrocyte glycoprotein induces aquaporin-4 autoantibodies in mouse experimental autoimmune encephalomyelitis. Wu X, etal., J Neuroimmunol. 2013 Aug 15;261(1-2):1-6. doi: 10.1016/j.jneuroim.2013.03.008. Epub 2013 May 22.
72. Clinical features and sera anti-aquaporin 4 antibody positivity in patients with demyelinating disorders of the central nervous system from Tianjin, China. Yang CS, etal., CNS Neurosci Ther. 2014 Jan;20(1):32-9. doi: 10.1111/cns.12156. Epub 2013 Jul 27.
73. Temporal changes in expression of aquaporin-3, -4, -5 and -8 in rat brains after permanent focal cerebral ischemia. Yang M, etal., Brain Res. 2009 Sep 22;1290:121-32. Epub 2009 Jul 16.
74. Differential Regulations of AQP4 and Kir4.1 by Triamcinolone Acetonide and Dexamethasone in the Healthy and Inflamed Retina. Zhao M, etal., Invest Ophthalmol Vis Sci. 2011 Aug 11;52(9):6340-7. Print 2011 Sep.
75. Favorable effects of MMP-9 knockdown in murine herpes simplex encephalitis using small interfering RNA. Zhou Y, etal., Neurol Res. 2010 Oct;32(8):801-9. doi: 10.1179/016164110X12644252260556. Epub 2010 May 18.
Additional References at PubMed
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PMID:22540328   PMID:22554469   PMID:22608667   PMID:22628234   PMID:22679274   PMID:22714714   PMID:22718347   PMID:22732097   PMID:22773464   PMID:22777185   PMID:22802001   PMID:22808259  
PMID:22817997   PMID:22829325   PMID:22886979   PMID:22906356   PMID:22925751   PMID:22987438   PMID:23008451   PMID:23054238   PMID:23232103   PMID:23270503   PMID:23378324   PMID:23456674  
PMID:23658379   PMID:23664693   PMID:23673145   PMID:23677744   PMID:23746426   PMID:23915916   PMID:23928039   PMID:23950863   PMID:23973312   PMID:23997151   PMID:24014171   PMID:24029914  
PMID:24182872   PMID:24192218   PMID:24260168   PMID:24289379   PMID:24356448   PMID:24361961   PMID:24388217   PMID:24415568   PMID:24582793   PMID:24727946   PMID:24733266   PMID:24866202  
PMID:24888368   PMID:24999750   PMID:25013167   PMID:25027061   PMID:25096173   PMID:25128605   PMID:25160125   PMID:25239624   PMID:25257965   PMID:25306413   PMID:25460197   PMID:25668569  
PMID:25677878   PMID:25792738   PMID:25839357   PMID:25895050   PMID:25910212   PMID:25913278   PMID:26000774   PMID:26013827   PMID:26115524   PMID:26163068   PMID:26261083   PMID:26287441  
PMID:26375433   PMID:26419740   PMID:26512424   PMID:26530185   PMID:26638215   PMID:26786101   PMID:26853804   PMID:26919570   PMID:26920678   PMID:27012886   PMID:27063619   PMID:27357591  
PMID:27483250   PMID:27538606   PMID:27552812   PMID:27586951   PMID:27623738   PMID:27760862   PMID:27893874   PMID:27988051   PMID:28071581   PMID:28125740   PMID:28206694   PMID:28283103  
PMID:28317216   PMID:28455098   PMID:28477975   PMID:28520217   PMID:28569417   PMID:28648105   PMID:28734904   PMID:28820467   PMID:28925524   PMID:28972406   PMID:29055082   PMID:29141819  
PMID:29193153   PMID:29363875   PMID:29405337   PMID:29479071   PMID:29484417   PMID:29565042   PMID:29655487   PMID:29791485   PMID:30306658   PMID:30423808   PMID:30563176   PMID:30578930  
PMID:30791865   PMID:30873889   PMID:30981824   PMID:31028503   PMID:31068220   PMID:31078684   PMID:31092756   PMID:31156164   PMID:31220136   PMID:31286866   PMID:31674022   PMID:31746080  
PMID:31752329   PMID:31896291   PMID:31912092   PMID:32059400   PMID:32111161   PMID:32167542   PMID:32296044   PMID:32296183   PMID:32369477   PMID:32521482   PMID:32575026   PMID:32702642  
PMID:32737792   PMID:32829484   PMID:32998402   PMID:33068891   PMID:33147540   PMID:33297299   PMID:33301561   PMID:33418309   PMID:33455522   PMID:33479350   PMID:33538957   PMID:33629286  
PMID:33802046   PMID:34168058   PMID:34263427   PMID:34474133   PMID:34509490   PMID:34597351   PMID:34650163   PMID:34715591   PMID:34753987   PMID:35069584   PMID:35163040   PMID:35187599  
PMID:35260880   PMID:35346374   PMID:35454180   PMID:35625560   PMID:35709078   PMID:35715607   PMID:35896371   PMID:36142348   PMID:36303271   PMID:36520371   PMID:36599974   PMID:36610359  
PMID:36610362   PMID:36626962   PMID:36796590   PMID:36830582   PMID:36922751   PMID:37020131   PMID:37032643   PMID:37037365   PMID:37143309   PMID:37191905   PMID:37821965   PMID:37975746  
PMID:38114727   PMID:38141747   PMID:38224279   PMID:38307548   PMID:38338949   PMID:38383779   PMID:38576611   PMID:38802114  


Genomics

Comparative Map Data
AQP4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381826,852,038 - 26,865,803 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1826,852,043 - 26,865,771 (-)EnsemblGRCh38hg38GRCh38
GRCh371824,432,002 - 24,445,767 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361822,686,005 - 22,699,714 (-)NCBINCBI36Build 36hg18NCBI36
Build 341822,686,007 - 22,699,714NCBI
Celera1821,242,174 - 21,255,883 (-)NCBICelera
Cytogenetic Map18q11.2NCBI
HuRef1821,281,696 - 21,295,401 (-)NCBIHuRef
CHM1_11824,359,750 - 24,373,454 (-)NCBICHM1_1
T2T-CHM13v2.01827,046,091 - 27,059,856 (-)NCBIT2T-CHM13v2.0
Aqp4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391815,522,451 - 15,544,039 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1815,522,553 - 15,544,039 (-)EnsemblGRCm39 Ensembl
GRCm381815,389,394 - 15,410,982 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1815,389,496 - 15,410,982 (-)EnsemblGRCm38mm10GRCm38
MGSCv371815,547,903 - 15,562,193 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361815,535,839 - 15,546,671 (-)NCBIMGSCv36mm8
Celera1815,609,213 - 15,623,487 (-)NCBICelera
Cytogenetic Map18A1NCBI
cM Map188.74NCBI
Aqp4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8186,782,389 - 6,799,034 (-)NCBIGRCr8
mRatBN7.2186,507,903 - 6,524,558 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl186,507,903 - 6,524,856 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx186,733,660 - 6,750,099 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0187,521,314 - 7,537,753 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0186,792,881 - 6,809,322 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0186,766,009 - 6,782,757 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl186,765,945 - 6,782,996 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0186,720,759 - 6,737,703 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4186,626,313 - 6,642,766 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1186,628,189 - 6,642,700 (-)NCBI
Celera186,530,014 - 6,546,446 (-)NCBICelera
RH 3.4 Map1878.3RGD
RH 3.4 Map1886.21RGD
Cytogenetic Map18p13NCBI
Aqp4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049557721,159 - 10,709 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049557721,160 - 10,709 (+)NCBIChiLan1.0ChiLan1.0
AQP4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21744,280,877 - 44,294,636 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11829,973,472 - 29,987,231 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01820,108,607 - 20,122,381 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11823,713,141 - 23,726,919 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1823,713,146 - 23,726,919 (-)Ensemblpanpan1.1panPan2
AQP4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1761,855,617 - 61,868,953 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl761,855,744 - 61,865,089 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha761,290,817 - 61,304,150 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0761,906,422 - 61,919,761 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl761,906,451 - 61,926,075 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1761,579,168 - 61,592,459 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0761,591,530 - 61,604,873 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0761,894,861 - 61,908,198 (+)NCBIUU_Cfam_GSD_1.0
Aqp4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494457,872,160 - 57,884,958 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365505,931,194 - 5,941,354 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365505,931,201 - 5,943,999 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AQP4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6111,407,639 - 111,422,109 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16111,407,632 - 111,422,169 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26104,387,592 - 104,394,409 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AQP4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11853,729,143 - 53,742,916 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1853,729,186 - 53,743,156 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605028,456,973 - 28,470,756 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aqp4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247705,580,808 - 5,594,628 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247705,581,192 - 5,593,470 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AQP4
21 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_001650.7(AQP4):c.332G>C (p.Ser111Thr) single nucleotide variant Intellectual disability [RCV000515759] Chr18:26862297 [GRCh38]
Chr18:24442261 [GRCh37]
Chr18:18q11.2
likely pathogenic
GRCh38/hg38 18p11.32-q23(chr18:148963-80252149)x3 copy number gain See cases [RCV000051048] Chr18:148963..80252149 [GRCh38]
Chr18:148963..78010032 [GRCh37]
Chr18:138963..76111023 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18q11.1-23(chr18:20960320-80234429)x3 copy number gain See cases [RCV000052543] Chr18:20960320..80234429 [GRCh38]
Chr18:18540281..77992312 [GRCh37]
Chr18:16794279..76093303 [NCBI36]
Chr18:18q11.1-23
pathogenic
GRCh38/hg38 18q11.1-12.1(chr18:20960320-28601877)x3 copy number gain See cases [RCV000052545] Chr18:20960320..28601877 [GRCh38]
Chr18:18540281..26181841 [GRCh37]
Chr18:16794279..24435839 [NCBI36]
Chr18:18q11.1-12.1
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:53345-80209986)x3 copy number gain See cases [RCV000052501] Chr18:53345..80209986 [GRCh38]
Chr18:53345..77967869 [GRCh37]
Chr18:43345..76068860 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18q11.1-23(chr18:20989762-80209986)x3 copy number gain See cases [RCV000052549] Chr18:20989762..80209986 [GRCh38]
Chr18:18569723..77967869 [GRCh37]
Chr18:16823721..76068860 [NCBI36]
Chr18:18q11.1-23
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:148763-80252290)x3 copy number gain See cases [RCV000052507] Chr18:148763..80252290 [GRCh38]
Chr18:148763..78010173 [GRCh37]
Chr18:138763..76111164 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:118760-80254946)x3 copy number gain See cases [RCV000138656] Chr18:118760..80254946 [GRCh38]
Chr18:118760..78012829 [GRCh37]
Chr18:108760..76113817 [NCBI36]
Chr18:18p11.32-q23
pathogenic|conflicting data from submitters
GRCh38/hg38 18p11.32-q23(chr18:148963-80244381)x3 copy number gain See cases [RCV000052514] Chr18:148963..80244381 [GRCh38]
Chr18:148963..78002264 [GRCh37]
Chr18:138963..76103255 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:149089-80234391)x3 copy number gain See cases [RCV000134110] Chr18:149089..80234391 [GRCh38]
Chr18:149089..77992274 [GRCh37]
Chr18:139089..76093265 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:149089-80254936)x3 copy number gain See cases [RCV000139397] Chr18:149089..80254936 [GRCh38]
Chr18:149089..78012819 [GRCh37]
Chr18:139089..76113807 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18q11.1-12.1(chr18:20949378-34363455)x3 copy number gain See cases [RCV000141646] Chr18:20949378..34363455 [GRCh38]
Chr18:18529339..31943419 [GRCh37]
Chr18:16783337..30197417 [NCBI36]
Chr18:18q11.1-12.1
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:136227-80256240)x3 copy number gain See cases [RCV000142244] Chr18:136227..80256240 [GRCh38]
Chr18:136227..78014123 [GRCh37]
Chr18:126227..76115097 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18q11.1-12.3(chr18:20941324-40360620)x3 copy number gain See cases [RCV000142226] Chr18:20941324..40360620 [GRCh38]
Chr18:18521285..37940584 [GRCh37]
Chr18:16775283..36194582 [NCBI36]
Chr18:18q11.1-12.3
pathogenic
GRCh38/hg38 18q11.1-22.3(chr18:20962119-74691446)x3 copy number gain See cases [RCV000143057] Chr18:20962119..74691446 [GRCh38]
Chr18:18542080..72403402 [GRCh37]
Chr18:16796078..70532390 [NCBI36]
Chr18:18q11.1-22.3
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:136226-80256240)x3 copy number gain See cases [RCV000143218] Chr18:136226..80256240 [GRCh38]
Chr18:136226..78014123 [GRCh37]
Chr18:126226..76115097 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:148963-80252149)x3 copy number gain See cases [RCV000148072] Chr18:148963..80252149 [GRCh38]
Chr18:148963..78010032 [GRCh37]
Chr18:138963..76111023 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh37/hg19 18p11.32-q23(chr18:163323-78005236)x3 copy number gain See cases [RCV000240130] Chr18:163323..78005236 [GRCh37]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18q11.2(chr18:26827472-27054730)x3 copy number gain See cases [RCV000141099] Chr18:26827472..27054730 [GRCh38]
Chr18:24407436..24634694 [GRCh37]
Chr18:22661434..22888692 [NCBI36]
Chr18:18q11.2
likely benign
NM_001650.7(AQP4):c.955G>A (p.Val319Ile) single nucleotide variant not specified [RCV000239267] Chr18:26856228 [GRCh38]
Chr18:24436192 [GRCh37]
Chr18:18q11.2
uncertain significance
GRCh37/hg19 18q11.2-12.2(chr18:20069932-36887326)x1 copy number loss See cases [RCV000510691] Chr18:20069932..36887326 [GRCh37]
Chr18:18q11.2-12.2
pathogenic
GRCh37/hg19 18q11.1-22.1(chr18:18521285-64495798)x3 copy number gain See cases [RCV000511734] Chr18:18521285..64495798 [GRCh37]
Chr18:18q11.1-22.1
pathogenic
GRCh37/hg19 18p11.32-q21.1(chr18:136227-46171053)x3 copy number gain See cases [RCV000511857] Chr18:136227..46171053 [GRCh37]
Chr18:18p11.32-q21.1
pathogenic
NM_001650.7(AQP4):c.714C>G (p.Ile238Met) single nucleotide variant not specified [RCV004292374] Chr18:26856469 [GRCh38]
Chr18:24436433 [GRCh37]
Chr18:18q11.2
uncertain significance
GRCh37/hg19 18q11.1-23(chr18:18548019-77954165)x3 copy number gain See cases [RCV000240476] Chr18:18548019..77954165 [GRCh37]
Chr18:18q11.1-23
pathogenic
GRCh37/hg19 18p11.32-q23(chr18:136226-78014123)x3 copy number gain See cases [RCV000446047] Chr18:136226..78014123 [GRCh37]
Chr18:18p11.32-q23
pathogenic
GRCh37/hg19 18p11.32-q23(chr18:163323-78005185)x3 copy number gain See cases [RCV000445851] Chr18:163323..78005185 [GRCh37]
Chr18:18p11.32-q23
pathogenic
GRCh37/hg19 18p11.21-q23(chr18:14869204-78014123)x3 copy number gain See cases [RCV000512030] Chr18:14869204..78014123 [GRCh37]
Chr18:18p11.21-q23
pathogenic
GRCh37/hg19 18p11.32-q23(chr18:136227-78014123) copy number gain See cases [RCV000511189] Chr18:136227..78014123 [GRCh37]
Chr18:18p11.32-q23
pathogenic
NM_001650.7(AQP4):c.643G>A (p.Ala215Thr) single nucleotide variant Megalencephalic leukoencephalopathy with subcortical cysts 4, remitting [RCV003315379] Chr18:26860822 [GRCh38]
Chr18:24440786 [GRCh37]
Chr18:18q11.2
pathogenic
GRCh37/hg19 18q11.1-21.2(chr18:18539806-49926444)x2 copy number gain not provided [RCV000739776] Chr18:18539806..49926444 [GRCh37]
Chr18:18q11.1-21.2
pathogenic
GRCh37/hg19 18p11.32-q23(chr18:13034-78015180)x3 copy number gain not provided [RCV000752246] Chr18:13034..78015180 [GRCh37]
Chr18:18p11.32-q23
pathogenic
NM_001650.7(AQP4):c.819A>G (p.Thr273=) single nucleotide variant not provided [RCV000973220] Chr18:26856364 [GRCh38]
Chr18:24436328 [GRCh37]
Chr18:18q11.2
benign
NM_001650.7(AQP4):c.100T>C (p.Phe34Leu) single nucleotide variant not provided [RCV000884644]|not specified [RCV004028340] Chr18:26862529 [GRCh38]
Chr18:24442493 [GRCh37]
Chr18:18q11.2
likely benign|uncertain significance
NM_001650.7(AQP4):c.552T>A (p.Asp184Glu) single nucleotide variant not provided [RCV000955535] Chr18:26861191 [GRCh38]
Chr18:24441155 [GRCh37]
Chr18:18q11.2
benign
NM_001650.7(AQP4):c.894G>A (p.Val298=) single nucleotide variant not provided [RCV000887514] Chr18:26856289 [GRCh38]
Chr18:24436253 [GRCh37]
Chr18:18q11.2
benign
NM_001650.7(AQP4):c.27G>T (p.Arg9=) single nucleotide variant not provided [RCV000913599] Chr18:26865663 [GRCh38]
Chr18:24445627 [GRCh37]
Chr18:18q11.2
benign
GRCh37/hg19 18q11.2-21.2(chr18:20689919-49455212)x3 copy number gain not provided [RCV001006980] Chr18:20689919..49455212 [GRCh37]
Chr18:18q11.2-21.2
pathogenic
GRCh37/hg19 18q11.2-12.1(chr18:23586307-25193192)x1 copy number loss not provided [RCV001258864] Chr18:23586307..25193192 [GRCh37]
Chr18:18q11.2-12.1
uncertain significance
GRCh37/hg19 18q11.2-12.2(chr18:23971647-33737300)x1 copy number loss See cases [RCV001263022] Chr18:23971647..33737300 [GRCh37]
Chr18:18q11.2-12.2
pathogenic
Single allele deletion Intellectual disability [RCV001787257] Chr18:1262336..53254747 [GRCh37]
Chr18:18p11.32-q21.2
pathogenic
GRCh37/hg19 18q11.2-12.1(chr18:23050629-26026370)x3 copy number gain not provided [RCV001829136] Chr18:23050629..26026370 [GRCh37]
Chr18:18q11.2-12.1
uncertain significance
GRCh37/hg19 18p11.32-q23(chr18:136226-78014123) copy number gain not specified [RCV002052616] Chr18:136226..78014123 [GRCh37]
Chr18:18p11.32-q23
pathogenic
GRCh37/hg19 18q11.1-12.1(chr18:18611942-26843691)x3 copy number gain not provided [RCV001827640] Chr18:18611942..26843691 [GRCh37]
Chr18:18q11.1-12.1
uncertain significance
GRCh37/hg19 18p11.32-q12.1(chr18:136226-25252276)x3 copy number gain not provided [RCV001832915] Chr18:136226..25252276 [GRCh37]
Chr18:18p11.32-q12.1
pathogenic
NM_001650.7(AQP4):c.30G>T (p.Trp10Cys) single nucleotide variant not specified [RCV004322194] Chr18:26865660 [GRCh38]
Chr18:24445624 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.210G>T (p.Met70Ile) single nucleotide variant not specified [RCV004152761] Chr18:26862419 [GRCh38]
Chr18:24442383 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.406G>T (p.Val136Phe) single nucleotide variant not specified [RCV004182342] Chr18:26862223 [GRCh38]
Chr18:24442187 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.778C>T (p.Arg260Cys) single nucleotide variant not specified [RCV004090352] Chr18:26856405 [GRCh38]
Chr18:24436369 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.694A>G (p.Ile232Val) single nucleotide variant not specified [RCV004155783] Chr18:26856489 [GRCh38]
Chr18:24436453 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.919G>A (p.Gly307Arg) single nucleotide variant not specified [RCV004234075] Chr18:26856264 [GRCh38]
Chr18:24436228 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.310A>G (p.Met104Val) single nucleotide variant not specified [RCV004155580] Chr18:26862319 [GRCh38]
Chr18:24442283 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.887C>G (p.Pro296Arg) single nucleotide variant not specified [RCV004080434] Chr18:26856296 [GRCh38]
Chr18:24436260 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.873C>A (p.Asp291Glu) single nucleotide variant not specified [RCV004276990] Chr18:26856310 [GRCh38]
Chr18:24436274 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.386G>C (p.Gly129Ala) single nucleotide variant not specified [RCV004362252] Chr18:26862243 [GRCh38]
Chr18:24442207 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.646C>T (p.Arg216Ter) single nucleotide variant Megalencephalic leukoencephalopathy with subcortical cysts 4, remitting [RCV003492911] Chr18:26860819 [GRCh38]
Chr18:24440783 [GRCh37]
Chr18:18q11.2
uncertain significance
GRCh37/hg19 18q11.1-12.1(chr18:18529339-26968022)x3 copy number gain not specified [RCV003987288] Chr18:18529339..26968022 [GRCh37]
Chr18:18q11.1-12.1
uncertain significance
NM_001650.7(AQP4):c.566T>C (p.Ile189Thr) single nucleotide variant not specified [RCV004420037] Chr18:26861177 [GRCh38]
Chr18:24441141 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.812A>G (p.Gln271Arg) single nucleotide variant not specified [RCV004420041] Chr18:26856371 [GRCh38]
Chr18:24436335 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.80A>G (p.Lys27Arg) single nucleotide variant not specified [RCV004420040] Chr18:26862549 [GRCh38]
Chr18:24442513 [GRCh37]
Chr18:18q11.2
likely benign
NM_001650.7(AQP4):c.201G>T (p.Pro67=) single nucleotide variant AQP4-related disorder [RCV003982193] Chr18:26862428 [GRCh38]
Chr18:24442392 [GRCh37]
Chr18:18q11.2
benign
NM_001650.7(AQP4):c.383T>C (p.Ile128Thr) single nucleotide variant AQP4-related disorder [RCV003981206] Chr18:26862246 [GRCh38]
Chr18:24442210 [GRCh37]
Chr18:18q11.2
likely benign
NM_001650.7(AQP4):c.670A>T (p.Met224Leu) single nucleotide variant not specified [RCV004420039] Chr18:26860795 [GRCh38]
Chr18:24440759 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.866C>T (p.Thr289Met) single nucleotide variant EBV-positive nodal T- and NK-cell lymphoma [RCV004560320] Chr18:26856317 [GRCh38]
Chr18:24436281 [GRCh37]
Chr18:18q11.2
likely benign
NM_001650.7(AQP4):c.585T>A (p.Phe195Leu) single nucleotide variant not specified [RCV004420038] Chr18:26861158 [GRCh38]
Chr18:24441122 [GRCh37]
Chr18:18q11.2
uncertain significance
GRCh37/hg19 18p11.32-q23(chr18:12842-78015180)x3 copy number gain not provided [RCV000752245] Chr18:12842..78015180 [GRCh37]
Chr18:18p11.32-q23
pathogenic
NM_001650.7(AQP4):c.578T>C (p.Ile193Thr) single nucleotide variant not provided [RCV000880909] Chr18:26861165 [GRCh38]
Chr18:24441129 [GRCh37]
Chr18:18q11.2
likely benign
GRCh37/hg19 18q11.2-12.2(chr18:22868759-34335753)x1 copy number loss not provided [RCV001006964] Chr18:22868759..34335753 [GRCh37]
Chr18:18q11.2-12.2
pathogenic
GRCh37/hg19 18q11.2-23(chr18:23626739-78014976)x3 copy number gain not provided [RCV001537911] Chr18:23626739..78014976 [GRCh37]
Chr18:18q11.2-23
pathogenic
GRCh37/hg19 18p11.32-q23(chr18:1-78077248) copy number gain Trisomy 18 [RCV002280660] Chr18:1..78077248 [GRCh37]
Chr18:18p11.32-q23
pathogenic
GRCh37/hg19 18q11.2(chr18:24091410-24777780)x4 copy number gain not provided [RCV003485367] Chr18:24091410..24777780 [GRCh37]
Chr18:18q11.2
uncertain significance
NM_001650.7(AQP4):c.56G>C (p.Arg19Thr) single nucleotide variant AQP4-related disorder [RCV003924432] Chr18:26862573 [GRCh38]
Chr18:24442537 [GRCh37]
Chr18:18q11.2
likely benign
miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR320Ahsa-miR-320aMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI20628061

Predicted Target Of
Summary Value
Count of predictions:2879
Count of miRNA genes:1069
Interacting mature miRNAs:1291
Transcripts:ENST00000383168, ENST00000383170, ENST00000440832, ENST00000578776, ENST00000581374, ENST00000583022, ENST00000584088
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
WI-21214  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,432,332 - 24,432,599UniSTSGRCh37
Build 361822,686,330 - 22,686,597RGDNCBI36
Celera1821,242,499 - 21,242,766RGD
Cytogenetic Map18q11.2-q12.1UniSTS
Whitehead-RH Map18221.4UniSTS
NCBI RH Map18342.9UniSTS
A006W40  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,433,369 - 24,433,472UniSTSGRCh37
Build 361822,687,367 - 22,687,470RGDNCBI36
Celera1821,243,536 - 21,243,639RGD
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,283,058 - 21,283,161UniSTS
GeneMap99-GB4 RH Map18240.68UniSTS
WI-13598  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,435,987 - 24,436,136UniSTSGRCh37
Build 361822,689,985 - 22,690,134RGDNCBI36
Celera1821,246,154 - 21,246,303RGD
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,285,676 - 21,285,825UniSTS
Whitehead-RH Map18213.7UniSTS
D18S1223  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,433,762 - 24,433,899UniSTSGRCh37
GRCh371824,433,628 - 24,433,841UniSTSGRCh37
Build 361822,687,626 - 22,687,839RGDNCBI36
Celera1821,243,795 - 21,244,008RGD
Celera1821,243,929 - 21,244,066UniSTS
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,283,317 - 21,283,530UniSTS
HuRef1821,283,451 - 21,283,588UniSTS
TNG Radiation Hybrid Map188386.0UniSTS
Stanford-G3 RH Map18852.0UniSTS
NCBI RH Map18316.6UniSTS
GeneMap99-G3 RH Map18852.0UniSTS
SHGC-36589  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,434,003 - 24,434,116UniSTSGRCh37
Build 361822,688,001 - 22,688,114RGDNCBI36
Celera1821,244,170 - 21,244,283RGD
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,283,692 - 21,283,805UniSTS
Stanford-G3 RH Map18865.0UniSTS
NCBI RH Map18321.5UniSTS
GeneMap99-G3 RH Map18865.0UniSTS
RH25921  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,435,368 - 24,435,632UniSTSGRCh37
Build 361822,689,366 - 22,689,630RGDNCBI36
Celera1821,245,535 - 21,245,799RGD
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,285,057 - 21,285,321UniSTS
RH121996  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,445,531 - 24,445,859UniSTSGRCh37
Build 361822,699,529 - 22,699,857RGDNCBI36
Celera1821,255,698 - 21,256,026RGD
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,295,216 - 21,295,544UniSTS
TNG Radiation Hybrid Map188400.0UniSTS
D18S941E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,435,157 - 24,435,346UniSTSGRCh37
Build 361822,689,155 - 22,689,344RGDNCBI36
Celera1821,245,324 - 21,245,513RGD
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,284,846 - 21,285,035UniSTS
AQP4_717  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,435,398 - 24,436,198UniSTSGRCh37
Build 361822,689,396 - 22,690,196RGDNCBI36
Celera1821,245,565 - 21,246,365RGD
HuRef1821,285,087 - 21,285,887UniSTS
D18S1195  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,434,007 - 24,434,116UniSTSGRCh37
Build 361822,688,005 - 22,688,114RGDNCBI36
Celera1821,244,174 - 21,244,283RGD
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,283,696 - 21,283,805UniSTS
Whitehead-YAC Contig Map18 UniSTS
RH18229  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,432,797 - 24,432,920UniSTSGRCh37
Build 361822,686,795 - 22,686,918RGDNCBI36
Celera1821,242,964 - 21,243,087RGD
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,282,486 - 21,282,609UniSTS
GeneMap99-GB4 RH Map18237.6UniSTS
A002Q03  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371824,432,049 - 24,432,211UniSTSGRCh37
Build 361822,686,047 - 22,686,209RGDNCBI36
Celera1821,242,216 - 21,242,378RGD
Cytogenetic Map18q11.2-q12.1UniSTS
HuRef1821,281,738 - 21,281,900UniSTS
NCBI RH Map18322.6UniSTS
D18S1223  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map18q11.2-q12.1UniSTS
TNG Radiation Hybrid Map188386.0UniSTS
Stanford-G3 RH Map18842.0UniSTS
NCBI RH Map18312.3UniSTS
GeneMap99-G3 RH Map18842.0UniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001317384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001317387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_004028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB128929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB209156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC018371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH009853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK026728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK222684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL119338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL138136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV725241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC045780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI596912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI667387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI917845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ638704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU687682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD105892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK001094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D63412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA244620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DT220791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ901095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF055862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  N50070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  R35726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U34845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U63622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U63623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000383168   ⟹   ENSP00000372654
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,852,043 - 26,865,707 (-)Ensembl
Ensembl Acc Id: ENST00000383170   ⟹   ENSP00000372656
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,861,254 - 26,865,771 (-)Ensembl
Ensembl Acc Id: ENST00000440832   ⟹   ENSP00000393121
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,856,211 - 26,863,190 (-)Ensembl
Ensembl Acc Id: ENST00000578776   ⟹   ENSP00000462075
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,860,785 - 26,865,707 (-)Ensembl
Ensembl Acc Id: ENST00000581374   ⟹   ENSP00000462597
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,855,817 - 26,862,848 (-)Ensembl
Ensembl Acc Id: ENST00000583022
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,856,289 - 26,862,176 (-)Ensembl
Ensembl Acc Id: ENST00000584088
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,860,691 - 26,862,406 (-)Ensembl
Ensembl Acc Id: ENST00000672188   ⟹   ENSP00000500720
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,852,046 - 26,865,752 (-)Ensembl
Ensembl Acc Id: ENST00000672981   ⟹   ENSP00000500598
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,852,043 - 26,865,707 (-)Ensembl
Ensembl Acc Id: ENST00000675739   ⟹   ENSP00000502364
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1826,856,211 - 26,865,689 (-)Ensembl
RefSeq Acc Id: NM_001317384   ⟹   NP_001304313
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381826,852,043 - 26,865,707 (-)NCBI
CHM1_11824,359,745 - 24,373,546 (-)NCBI
T2T-CHM13v2.01827,046,096 - 27,059,760 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001317387   ⟹   NP_001304316
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381826,852,043 - 26,865,707 (-)NCBI
CHM1_11824,359,745 - 24,373,546 (-)NCBI
T2T-CHM13v2.01827,046,096 - 27,059,760 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001364286   ⟹   NP_001351215
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381826,852,038 - 26,865,803 (-)NCBI
T2T-CHM13v2.01827,046,091 - 27,059,856 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001364287   ⟹   NP_001351216
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381826,852,038 - 26,865,803 (-)NCBI
T2T-CHM13v2.01827,046,091 - 27,059,856 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001364289   ⟹   NP_001351218
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381826,852,043 - 26,862,910 (-)NCBI
T2T-CHM13v2.01827,046,096 - 27,056,963 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001650   ⟹   NP_001641
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381826,852,043 - 26,865,707 (-)NCBI
GRCh371824,432,007 - 24,445,735 (-)NCBI
Build 361822,686,005 - 22,699,714 (-)NCBI Archive
HuRef1821,281,696 - 21,295,401 (-)ENTREZGENE
CHM1_11824,359,745 - 24,373,546 (-)NCBI
T2T-CHM13v2.01827,046,096 - 27,059,760 (-)NCBI
Sequence:
RefSeq Acc Id: NM_004028   ⟹   NP_004019
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381826,852,043 - 26,862,910 (-)NCBI
GRCh371824,432,007 - 24,445,735 (-)NCBI
Build 361822,686,005 - 22,696,573 (-)NCBI Archive
HuRef1821,281,696 - 21,295,401 (-)ENTREZGENE
CHM1_11824,359,745 - 24,370,611 (-)NCBI
T2T-CHM13v2.01827,046,096 - 27,056,963 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525942   ⟹   XP_011524244
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381826,852,038 - 26,865,707 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001304313 (Get FASTA)   NCBI Sequence Viewer  
  NP_001304316 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351215 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351216 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351218 (Get FASTA)   NCBI Sequence Viewer  
  NP_001641 (Get FASTA)   NCBI Sequence Viewer  
  NP_004019 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524244 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB26957 (Get FASTA)   NCBI Sequence Viewer  
  AAB26958 (Get FASTA)   NCBI Sequence Viewer  
  AAC50284 (Get FASTA)   NCBI Sequence Viewer  
  AAG17964 (Get FASTA)   NCBI Sequence Viewer  
  AAH22286 (Get FASTA)   NCBI Sequence Viewer  
  ADZ13511 (Get FASTA)   NCBI Sequence Viewer  
  AGX27825 (Get FASTA)   NCBI Sequence Viewer  
  BAA09715 (Get FASTA)   NCBI Sequence Viewer  
  BAD22823 (Get FASTA)   NCBI Sequence Viewer  
  BAD92393 (Get FASTA)   NCBI Sequence Viewer  
  BAD96404 (Get FASTA)   NCBI Sequence Viewer  
  BAG58116 (Get FASTA)   NCBI Sequence Viewer  
  EAX01228 (Get FASTA)   NCBI Sequence Viewer  
  EAX01229 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000372654
  ENSP00000372654.4
  ENSP00000372656.3
  ENSP00000393121.3
  ENSP00000462075.1
  ENSP00000462597
  ENSP00000462597.1
  ENSP00000500598
  ENSP00000500598.2
  ENSP00000500720.1
  ENSP00000502364
  ENSP00000502364.1
GenBank Protein P55087 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001641   ⟸   NM_001650
- Peptide Label: isoform M1
- UniProtKB: P78564 (UniProtKB/Swiss-Prot),   P55087 (UniProtKB/Swiss-Prot),   F1DSG4 (UniProtKB/TrEMBL),   Q53H97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_004019   ⟸   NM_004028
- Peptide Label: isoform M23
- UniProtKB: Q53H97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011524244   ⟸   XM_011525942
- Peptide Label: isoform X1
- UniProtKB: Q53H97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001304316   ⟸   NM_001317387
- Peptide Label: isoform delta4
- UniProtKB: V9PBN7 (UniProtKB/TrEMBL),   Q53H97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001304313   ⟸   NM_001317384
- Peptide Label: isoform M1x
- UniProtKB: A0A5F9ZHR4 (UniProtKB/TrEMBL),   Q53H97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001351215   ⟸   NM_001364286
- Peptide Label: isoform M23
- UniProtKB: Q53H97 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351216   ⟸   NM_001364287
- Peptide Label: isoform M23x
- UniProtKB: Q53H97 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351218   ⟸   NM_001364289
- Peptide Label: isoform M23x
- UniProtKB: Q53H97 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSP00000462597   ⟸   ENST00000581374
Ensembl Acc Id: ENSP00000393121   ⟸   ENST00000440832
Ensembl Acc Id: ENSP00000462075   ⟸   ENST00000578776
Ensembl Acc Id: ENSP00000372654   ⟸   ENST00000383168
Ensembl Acc Id: ENSP00000372656   ⟸   ENST00000383170
Ensembl Acc Id: ENSP00000500720   ⟸   ENST00000672188
Ensembl Acc Id: ENSP00000500598   ⟸   ENST00000672981
Ensembl Acc Id: ENSP00000502364   ⟸   ENST00000675739

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P55087-F1-model_v2 AlphaFold P55087 1-323 view protein structure

Promoters
RGD ID:7237097
Promoter ID:EPDNEW_H24293
Type:initiation region
Name:AQP4_1
Description:aquaporin 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381826,865,707 - 26,865,767EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:637 AgrOrtholog
COSMIC AQP4 COSMIC
Ensembl Genes ENSG00000171885 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000383168 ENTREZGENE
  ENST00000383168.9 UniProtKB/Swiss-Prot
  ENST00000383170.3 UniProtKB/TrEMBL
  ENST00000440832.7 UniProtKB/Swiss-Prot
  ENST00000578776.1 UniProtKB/TrEMBL
  ENST00000581374 ENTREZGENE
  ENST00000581374.5 UniProtKB/Swiss-Prot
  ENST00000672188.1 UniProtKB/Swiss-Prot
  ENST00000672981 ENTREZGENE
  ENST00000672981.2 UniProtKB/TrEMBL
  ENST00000675739 ENTREZGENE
  ENST00000675739.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1080.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000171885 GTEx
HGNC ID HGNC:637 ENTREZGENE
Human Proteome Map AQP4 Human Proteome Map
InterPro Aquaporin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Aquaporin_transptr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MIP_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:361 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 361 ENTREZGENE
OMIM 600308 OMIM
PANTHER AQUAPORIN-4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR19139 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA24922 PharmGKB
PRINTS AQUAPORIN4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MINTRINSICP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE MIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF81338 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A5F9ZHR4 ENTREZGENE, UniProtKB/TrEMBL
  AQP4_HUMAN UniProtKB/Swiss-Prot
  F1DSG4 ENTREZGENE, UniProtKB/TrEMBL
  H0Y3H5_HUMAN UniProtKB/TrEMBL
  J3KRM4_HUMAN UniProtKB/TrEMBL
  L0R6C7_HUMAN UniProtKB/TrEMBL
  P55087 ENTREZGENE
  P78564 ENTREZGENE
  Q53H97 ENTREZGENE, UniProtKB/TrEMBL
  Q6L7A0_HUMAN UniProtKB/TrEMBL
  Q9H3V7_HUMAN UniProtKB/TrEMBL
  V9PBN7 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary P78564 UniProtKB/Swiss-Prot