Tfec (transcription factor EC) - Rat Genome Database

Name: Tfec
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Tfec (transcription factor EC) Mus musculus

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Symbol:

Tfec

Name:

transcription factor EC

RGD ID:

735416

MGI Page

MGI

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within cellular response to heat. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in nucleus. Is expressed in several structures, including central nervous system; gut; male reproductive gland or organ; trunk somite; and urinary system. Orthologous to human TFEC (transcription factor EC).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

BB107417; bHLHe3; bHLHe34; MGC107474; mTFEC; Tcfec; TFE-C

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TFEC (transcription factor EC)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Tfec (transcription factor EC)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tfec (transcription factor EC)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TFEC (transcription factor EC)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TFEC (transcription factor EC)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tfec (transcription factor EC)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TFEC (transcription factor EC)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TFEC (transcription factor EC)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tfec (transcription factor EC)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Tfec (transcription factor EC)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	TFEC (transcription factor EC)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tfec (transcription factor EC)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Caenorhabditis elegans (roundworm):	hlh-30	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Mitf	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	RTG3	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	tfec	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Related Pseudogenes:

Gm2638

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	16,830,926 - 16,898,463 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	16,833,372 - 16,898,440 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	16,830,927 - 16,898,464 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	16,833,373 - 16,898,441 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	16,783,381 - 16,848,441 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	16,783,392 - 16,848,441 (-)	NCBI		MGSCv36	mm8
Celera	6	16,915,029 - 16,979,927 (-)	NCBI		Celera
Cytogenetic Map	6	A2	NCBI
cM Map	6	7.61	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane (ISO)

1,2-dimethylhydrazine (EXP)

1-chloro-2,4-dinitrobenzene (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (EXP)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-diaminodiphenylmethane (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

4-(ethoxymethylene)-2-phenyloxazol-5-one (EXP)

acetamide (ISO)

aflatoxin B1 (ISO)

aflatoxin M1 (ISO)

all-trans-retinoic acid (ISO)

amphetamine (ISO)

amphotericin B (ISO)

antirheumatic drug (ISO)

benzo[a]pyrene (EXP)

bisphenol A (ISO)

butanal (ISO)

CGP 52608 (ISO)

choline (EXP)

cisplatin (ISO)

copper atom (ISO)

copper(0) (ISO)

crocidolite asbestos (EXP)

decabromodiphenyl ether (ISO)

Dibutyl phosphate (ISO)

ethyl methanesulfonate (ISO)

etoposide (ISO)

folic acid (EXP)

gold atom (ISO)

gold(0) (ISO)

hydroxyurea (ISO)

L-methionine (EXP)

methyl methanesulfonate (ISO)

mitomycin C (ISO)

N-nitrosodimethylamine (ISO)

nickel atom (ISO)

paracetamol (EXP)

PCB138 (EXP)

pentanal (ISO)

perfluorooctane-1-sulfonic acid (EXP)

pirinixic acid (EXP)

propanal (ISO)

resveratrol (ISO)

rifampicin (ISO)

silicon dioxide (ISO)

silver atom (EXP)

silver(0) (EXP)

sodium arsenite (EXP)

styrene (EXP)

succimer (EXP)

sulforaphane (EXP)

tetrachloromethane (EXP)

titanium dioxide (EXP)

toluene 2,4-diisocyanate (EXP)

tremolite asbestos (EXP)

triptonide (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to heat (IDA)

negative regulation of transcription by RNA polymerase II (IEA,ISO)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of DNA-templated transcription (ISO)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

cytosol (IEA,ISO)

nucleoplasm (ISO,TAS)

nucleus (IBA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IEA,ISO)

protein binding (ISO)

protein dimerization activity (IEA)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,ISO)

sequence-specific double-stranded DNA binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal coat/hair pigmentation (IEA)

abnormal tail morphology (IEA)

absent coat pigmentation (IAGP)

increased circulating cholesterol level (IEA)

microphthalmia (IAGP)

no abnormal phenotype detected (IAGP)

osteopetrosis (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Mouse brain organization revealed through direct genome-scale TF expression analysis.	Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2.	Electronic Transfer of Homolog Data	MGD and Homologene mouse data transfer
3.	MGDs mouse GO annotations	MGD data from the GO Consortium
4.	MGD IEA	MGD IEA
5.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
9.	TFEC, a basic helix-loop-helix protein, forms heterodimers with TFE3 and inhibits TFE3-dependent transcription activation.	Zhao GQ, etal., Mol Cell Biol 1993 Aug;13(8):4505-12.

Additional References at PubMed

PMID:9973413	PMID:10036191	PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11930005	PMID:12477932	PMID:14681479	PMID:15459106	PMID:15908341	PMID:16141072
PMID:16141073	PMID:16971476	PMID:18272592	PMID:18287559	PMID:18557763	PMID:18755693	PMID:19379700	PMID:19877272	PMID:20059953	PMID:21267068	PMID:21677750	PMID:21873635
PMID:22792072	PMID:23340137	PMID:24194600	PMID:24952961	PMID:27626380	PMID:28238747	PMID:32098917	PMID:38355793

Genomics

Comparative Map Data

Tfec
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	16,830,926 - 16,898,463 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	16,833,372 - 16,898,440 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	16,830,927 - 16,898,464 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	16,833,373 - 16,898,441 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	16,783,381 - 16,848,441 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	16,783,392 - 16,848,441 (-)	NCBI		MGSCv36	mm8
Celera	6	16,915,029 - 16,979,927 (-)	NCBI		Celera
Cytogenetic Map	6	A2	NCBI
cM Map	6	7.61	NCBI

TFEC
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	115,935,152 - 116,159,896 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	115,935,148 - 116,159,896 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	115,575,206 - 115,670,817 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	115,362,438 - 115,458,034 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	115,173,976 - 115,264,746	NCBI
Celera	7	110,382,578 - 110,478,171 (-)	NCBI		Celera
Cytogenetic Map	7	q31.2	NCBI
HuRef	7	109,941,132 - 110,036,927 (-)	NCBI		HuRef
CHM1_1	7	115,508,483 - 115,604,121 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	117,250,129 - 117,474,879 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	114,970,614 - 115,066,276 (-)	NCBI

Tfec
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	46,072,093 - 46,146,200 (-)	NCBI		GRCr8
mRatBN7.2	4	45,106,129 - 45,180,236 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	45,107,641 - 45,180,236 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	50,100,101 - 50,172,609 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	46,021,794 - 46,094,161 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	44,447,122 - 44,519,608 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	44,063,533 - 44,136,815 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	44,065,045 - 44,136,815 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	44,670,886 - 44,744,984 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	42,422,172 - 42,495,654 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	42,541,818 - 42,615,301 (-)	NCBI
Celera	4	40,398,740 - 40,470,786 (-)	NCBI		Celera
RH 3.4 Map	4	258.81	RGD
Cytogenetic Map	4	q22	NCBI

Tfec
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955432	21,752,044 - 21,813,292 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955432	21,751,697 - 21,813,199 (-)	NCBI	ChiLan1.0	ChiLan1.0

TFEC
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	152,760,399 - 152,937,498 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	4,770,655 - 4,947,754 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	107,900,876 - 107,996,752 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	120,598,588 - 120,823,338 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

TFEC
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	54,977,603 - 55,194,728 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	54,979,110 - 55,105,323 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	54,368,445 - 54,589,602 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	55,011,659 - 55,232,717 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	55,016,421 - 55,192,923 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	55,043,051 - 55,264,294 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	54,731,988 - 54,953,053 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	55,102,571 - 55,323,323 (-)	NCBI		UU_Cfam_GSD_1.0

Tfec
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	43,684,480 - 43,749,006 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936589	2,971,417 - 3,000,694 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936589	2,971,350 - 3,001,480 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TFEC
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	30,122,494 - 30,175,484 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	29,980,394 - 30,260,226 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	32,094,390 - 32,287,701 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TFEC
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	84,655,653 - 84,858,828 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	84,654,538 - 84,680,786 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	19,026,239 - 19,107,511 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tfec
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624827	3,426,277 - 3,496,989 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624827	3,472,157 - 3,498,689 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tfec
2024 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	162
Count of miRNA genes:	136
Interacting mature miRNAs:	149
Transcripts:	ENSMUST00000031533
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142271	Egq8_m	early growth QTL 8 (mouse)			Not determined			4503823	96633110	Mouse
11353836	Bmiq1_m	body mass index QTL 1 (mouse)					6	4503823	29751333	Mouse
26884441	Sklq3_m	skull length QTL 3, 5 week (mouse)					6	7600000	80576983	Mouse
1357520	Axtq2_m	anxiety QTL 2 (mouse)			Not determined		6	4503823	48703611	Mouse
10043869	Cia6a_m	collagen induced arthritis QTL 6a (mouse)			Not determined		6	12117971	46118069	Mouse
14746985	Manh59_m	mandible shape 59 (mouse)					6	1	20847193	Mouse
4141749	Obrq2_m	obesity resistance QTL 2 (mouse)			Not determined			12751221	46751333	Mouse
4142126	W3q3_m	weight 3 weeks QTL 3 (mouse)			Not determined			4503823	96633110	Mouse
1301131	Chol2_m	cholesterol 2 (mouse)			Not determined		6	1	32144495	Mouse
1302024	Skull7_m	skull morphology 7 (mouse)			Not determined		6	1	32144495	Mouse
11353841	Bmiq3_m	body mass index QTL 3 (mouse)					6	4503823	48703611	Mouse
11353840	Bmiq2_m	body mass index QTL 2 (mouse)					6	4503823	45291115	Mouse
1300556	Cia6_m	collagen induced arthritis QTL 6 (mouse)			Not determined		6	4464884	87403016	Mouse
12904934	Edlmmq4_m	extensor digitorum longus muscle mass QTL 4 (mouse)					6	1	25514064	Mouse
5491191	Mobq2_m	multigenic obesity QTL 2 (mouse)			Not determined		6	1	32144495	Mouse
25440480	Moaq2_m	modifier of alien QTL 2 (mouse)					6	3050001	117476961	Mouse
26884414	Bzwq12_m	bi-zygomatic width QTL 12, 16 week (mouse)					6	3400000	139076998	Mouse
4142361	W10q11_m	weight 10 weeks QTL 11 (mouse)			Not determined			4503823	96633110	Mouse
4142232	W6q4_m	weight 6 weeks QTL 4 (mouse)			Not determined			4503823	96633110	Mouse
1300731	Smdq3_m	segregation of mitochondrial DNA QTL 3 (mouse)			Not determined		6	4249206	38249325	Mouse
1301178	Lith10_m	lithogenic gene 10 (mouse)			Not determined		6	1	21465015	Mouse
15039372	Nmrs22_m	NAFLD-associated magnetic resonance shift 22 (mouse)					6	1476334	35476334	Mouse
12904942	Tammq3_m	tibialis anterior muscle mass QTL 3 (mouse)					6	1	25514064	Mouse
1357503	Nhdlq5_m	non-HDL QTL 5 (mouse)			Not determined		6	1	21465015	Mouse
1302051	Sluc7_m	susceptibility to lung cancer 7 (mouse)			Not determined		6	9297074	43297168	Mouse
10043884	Bhr8_m	bronchial hyperresponsiveness 8 (mouse)			Not determined		6	1	21465015	Mouse
10044000	Mobq9_m	multigenetic obesity QTL 9 (mouse)			Not determined		6	1	21465015	Mouse
1357481	Aaj2_m	anxiety in A/J 2 (mouse)			Not determined		6	4503823	48703611	Mouse
1301998	Bts2_m	bladder tumor susceptibility 2 (mouse)			Not determined		6	12751221	46751333	Mouse
12904955	Gmmq3_m	gastrocnemius muscle mass QTL 3 (mouse)					6	1	25514064	Mouse

Markers in Region

Tcfec

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	6	E4-G	UniSTS
cM Map	6		UniSTS
cM Map	6	7.61	UniSTS

BB107417

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	16,833,494 - 16,833,586	UniSTS	GRCm38
MGSCv37	6	16,783,494 - 16,783,586	UniSTS	GRCm37
Celera	6	16,915,142 - 16,915,234	UniSTS
Cytogenetic Map	6	E4-G	UniSTS

RH94544

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	16,833,998 - 16,834,185	UniSTS	GRCm38
MGSCv37	6	16,783,998 - 16,784,185	UniSTS	GRCm37
Celera	6	16,915,646 - 16,915,833	UniSTS
Cytogenetic Map	6	E4-G	UniSTS

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_031198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006505035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006505036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006505037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011241053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017321504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC102663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF077742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF077743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK137141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK156327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK157426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC052832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC064770	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC098494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000031533 ⟹ ENSMUSP00000031533

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	16,833,372 - 16,898,440 (-)	Ensembl
GRCm38.p6 Ensembl	6	16,833,373 - 16,898,441 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000200984

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	16,844,196 - 16,845,995 (-)	Ensembl
GRCm38.p6 Ensembl	6	16,844,197 - 16,845,996 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000201104

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	16,841,415 - 16,898,440 (-)	Ensembl
GRCm38.p6 Ensembl	6	16,841,416 - 16,898,441 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000201406 ⟹ ENSMUSP00000144445

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	16,834,691 - 16,835,262 (-)	Ensembl
GRCm38.p6 Ensembl	6	16,834,692 - 16,835,263 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000202997 ⟹ ENSMUSP00000143880

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	6	16,833,387 - 16,898,398 (-)	Ensembl
GRCm38.p6 Ensembl	6	16,833,388 - 16,898,399 (-)	Ensembl

RefSeq Acc Id:

NM_031198 ⟹ NP_112475

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	16,833,380 - 16,898,440 (-)	NCBI
GRCm38	6	16,833,381 - 16,898,441 (-)	NCBI
MGSCv37	6	16,783,381 - 16,848,441 (-)	RGD
Celera	6	16,915,029 - 16,979,927 (-)	RGD
cM Map	6		ENTREZGENE

Sequence:

show sequence

GAAATGCCCTAATGGGTGACTTCTCTTTTCTCCTTCCTCAACTAAGCGGATTCCAAGCTGTTCA
AACCATTTATTCTTCTTGAGCAGACCCTTGACTTTTGTGCTTAGGTTATGAGACGAGGGGCTGT
AATTTGGAGCTGTTTGTAGCCGCGATGACACACCTAGAATCCAATCAGTGCTGGTCCAGGCACA
CGTAGAAACCTCTACGAAGCCTCAGCTACAGAAGGCTCAAACACAACAAGTAACTCCTTTCATG
ACCTTTGACTGTCGGGTATGCGACCAGACTCTCAAGAGAGCGCAGCCTCCAGCAGCCAGCTGCA
TGCCTCTGGCAGAGCATGAACCCATGAGCCCAGACAGTGATGCTGGCTGTGCAGGAAACCCATT
CACAAATCTGCTGGCTCTTGGGAAAAAAGATGGTGCTGAGAAATGGCATTTATCTGGGAGTATT
TTGGATGTGTACAGTGATGAGCAGGGCATTTCTTCAGCTAATGCTGGTCTCACGGATGCTCCTT
GTCCAAGTATTCTACCCATGAGAAAGGAAATTGCAGAAACTGATGGTAGAGCTTTGGCAAAGGA
GAGACAGAAAAAGGACAACCACAACCTCATTGAAAGAAGAAGAAGGTATAATATTAATTACCGA
ATCAAGGAGCTTGGCACTCTTATTCCAAAGTCTAATGATCCTGATATGCGCTGGAACAAAGGGA
CCATTCTAAAGGCATCAGTGGACTACATCAAGTGGCTACAAAAAGAACAACAGAGAGCCCGGGA
GTTAGAACACAGACAGAAGAAATTAGAACATGCTAACCGTCAGCTTAGGCTCCGGATTCAGGAA
CTAGAAATACAAGCACGTGCTCATGGTCTACCAATCCTGGCTTCACTCGGCACAGCTGATGTTG
GTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACAACT
GACTCCAACTCAGGGGACAAGCCCGGAGTTCTATGAGCAAGCTGTGGCTTTCTCTGATCCATTG
TCTCACTTCACAGATTTATCCTTTAGTGCCGCTTTGAAAGAGGAACAAAGATTGGATGGCATGC
TACTAAGTGATACAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCCCTGCAGT
TTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTCAGAGGATGGTGATGAGTTGTAAGCCGCAAAC
AGGCTCAAGACATCAACCAGGAAGCAACTCTCTGCTGGTGCTACTCAATTGTGATCTGCCTTTC
ATACCTTGCTTTCACTTAACTCTCTGAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGT
GTTTAGAAGTGCTGGAAGAATTCATGGGAAGAAGAAACATGATGTGAAAGAATCATTGAAGATC
ACAGTTGTCTACCGAGTTCAGATTTCCTTACATTTATTTTTTTTTCTGGAAAATGGTCCAGCTT
GATAACGGCTCTAGTGTTGATACTTTCAGAGCAGTGACATGCTAGGATATTGCTGGAGCTAAGG
TCCTTCAAAAGACTGCAACATCCCACTCCCCTCTCACTCACGTCCAAATCCTGTGTTACTTTCT
ACAACATCATTTTCTAAAGATTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGG
GTGGACATACTATGTATGGTTGAATCCTTGTCGGGGGAAAAAAAAAGTATAAATTTTTTTTCAT
TTAAACTTGAAACTAAGTCTGAAATAAACATGATTTTTTTCAAAATAGAGC

hide sequence

RefSeq Acc Id:

XM_006505035 ⟹ XP_006505098

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	16,830,926 - 16,898,462 (-)	NCBI
GRCm38	6	16,830,927 - 16,898,464 (-)	NCBI

Sequence:

show sequence

TGAAATTCCAACCAGAGTCCAGGAAATGCCCTAATGGGTGACTTCTCTTTTCTCCTTCCTCAAC
TAAGCGGATTCCAAGCTGTTCAAACCATTTATTCTTCTTGAGCAGACCCTTGACTTTTGTGCTT
AGGTTATGAGACGAGGGGCTGTAATTTGGAGCTGTTTGTAGCCGCGATGACACACCTAGAATCC
AATCAGTGCTGAGGATAAGGCATCACAGAGAGATGGACTGACCCAGGGCAAGTCTCCTGAGATG
CTCATCCCATACATTAGATCATACCCTCCAATGGTCCAGGCACACGTAGAAACCTCTACGAAGC
CTCAGCTACAGAAGGCTCAAACACAACAAGTAACTCCTTTCATGACCTTTGACTGTCGGGTATG
CGACCAGACTCTCAAGAGAGCGCAGCCTCCAGCAGCCAGCTGCATGCCTCTGGCAGAGCATGAA
CCCATGAGCCCAGACAGTGATGCTGGCTGTGCAGGAAACCCATTCACAAATCTGCTGGCTCTTG
GGAAAAAAGATGGTGCTGAGAAATGGCATTTATCTGGGAGTATTTTGGATGTGTACAGTGATGA
GCAGGGCATTTCTTCAGCTAATGCTGGTCTCACGGATGCTCCTTGTCCAAGTATTCTACCCATG
AGAAAGGAAATTGCAGAAACTGATGGTAGAGCTTTGGCAAAGGAGAGACAGAAAAAGGACAACC
ACAACCTCATTGAAAGAAGAAGAAGGTATAATATTAATTACCGAATCAAGGAGCTTGGCACTCT
TATTCCAAAGTCTAATGATCCTGATATGCGCTGGAACAAAGGGACCATTCTAAAGGCATCAGTG
GACTACATCAAGTGGCTACAAAAAGAACAACAGAGAGCCCGGGAGTTAGAACACAGACAGAAGA
AATTAGAACATGCTAACCGTCAGCTTAGGCTCCGGATTCAGGAACTAGAAATACAAGCACGTGC
TCATGGTCTACCAATCCTGGCTTCACTCGGCACAGCTGATGTTGGTACCCACATCACCAAGCAG
CAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACAACTGACTCCAACTCAGGGGACAA
GCCCGGAGTTCTATGAGCAAGCTGTGGCTTTCTCTGATCCATTGTCTCACTTCACAGATTTATC
CTTTAGTGCCGCTTTGAAAGAGGAACAAAGATTGGATGGCATGCTACTAAGTGATACAATATGC
CCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAA
GCAGCCTTAGCTCAGAGGATGGTGATGAGTTGTAAGCCGCAAACAGGCTCAAGACATCAACCAG
GAAGCAACTCTCTGCTGGTGCTACTCAATTGTGATCTGCCTTTCATACCTTGCTTTCACTTAAC
TCTCTGAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGAA
TTCATGGGAAGAAGAAACATGATGTGAAAGAATCATTGAAGATCACAGTTGTCTACCGAGTTCA
GATTTCCTTACATTTATTTTTTTTTCTGGAAAATGGTCCAGCTTGATAACGGCTCTAGTGTTGA
TACTTTCAGAGCAGTGACATGCTAGGATATTGCTGGAGCTAAGGTCCTTCAAAAGACTGCAACA
TCCCACTCCCCTCTCACTCACGTCCAAATCCTGTGTTACTTTCTACAACATCATTTTCTAAAGA
TTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGT
TGAATCCTTGTCGGGGGAAAAAAAAAGTATAAATTTTTTTTCATTTAAACTTGAAACTAAGTCT
GAAATAAACATGATTTTTTTCAAAATAGAGCAAAGAATATTTCTTAAAGCAATGTTTTCTAAAA
TCATATTCTCACTCTTTTAATCAGTTCAATGAAATTAACTCTAAACACCTTGCATATTTATGGG
CCTACGGTTTCTTCAGATAAAGCAACACATTGAGGAGTCCCCTCCAAGACATGTCCCTGGATTT
TAATCGTTTTACACAAATACACATGCATACAATGTAGATAGGATCGATTGTTTCTTTCTGCTTC
ATTCCTCTGATGATCTCATCAATGCCATAAACTATATTCACATTTTTTTTTGTTCTTCAAAATA
TGTTGTATAATCAATTTTAGTAATTAAAATATAAAATATTCCCATACTAGGAAAACTTATCTGG
TATGTAATATGTAATTTAGATATGGATTTCTTATTCATATAGATATCACAAAAATTGATAAGAT
ATTGAATATTAGACTATCAACTGATCATCTGTAAGATGGAACTACATTTTATTTTATTCAGATA
TGATTGGAATTATGTGATTTTTCTCTTGAAATTGAGATGACGCTGTGGTTTGGCCTTTGTCACC
ATTTAGTACAATGTAAGTATTTGTATGTATAGTACTTCATTTGTGTTTTCTCTCTTGAATTTTC
TAAACTTTAGGAATTTTATTAGTATACATATTGCTTTGTGTGACATTATGGCTGGACCAAAATG
AATGATCATGAATCAGTCAACATTGGTGAGGGAATGCTTAAAACTACACTATGCCCTATGAGAC
TGTTGGACAGTGAGAAATATATATATATAATATCTGATTCTTGAGGAGGCATGTAACAAACCCA
CACGAAAACAAACCCGAAAGGTAGAGGGTGTGCAGAATTAAAATCTAATTATATGCTGTGAAGT
GGAAGTGTACAGAGATAATGAAGAAGATTGCAAATTTGAGTGGGAAATGCATTATGTAAAATGC
ACATGTTAGAAAGAAGGGGGTTAATATAGGCACAAATATTAACCAAATTATCGAAGAAAATACA
AGACGGAAATATCCTCCTGGGACATTTGTCTGACAAATCTGTATACCTTCCTTCAGGTGTTGTA
GTGAAAATTAAGTCTAGACTGCAATAATGTAGTAGAGATGAAATTTGTTACTAGAATGGAAAGT
TAGGTAACAAAATTTGTAGTTCTTGGTTGAGTTGTGATCTCTGGAATGTTCAAACAGGCTTAGG
ATTTTGTCCACAATATATCATCAAAATCTCTTTGGTTCTTACGCTATTGAAAATTGATGAAACC
CAAGATCCTTCTGGATAATAGCACTCTATTGCTTACTGTTTATCAGCTATGACTCTGGGATATT
AGAATATTTCACTGTTTGAGATGGAAAAGCCACTTATAATGTCTAGGAATGGCAGTTAAAGTCA
GATGGGTTGGTTCTATTATTATTTTAGTAATAATGACAAAAGTTTTCCTCAGAGTTGATAATTT
GATTTGACTTTGCAAATCAAAGGGAAATAAATGCTATATGTCCCATGGAAAACATACTGTTCTA
GCTAGAAGATTATTTCTTTTGTGTTTCTGCTGTTCCACTTTTTATTACATCTAAGGCTTGCATA
GGTGATAGTGTTGTCCTGACATAATTTTCTATCCTTGTCCAAAGAACTAAGGTATCATAGTATT
GGGTAAAATAAGGGCTTGGCAGATTGATCAAGCCTAGATATAAGGTTCTGGAGAAAAGACTAAT
AAATTTAATGCTCCATTTATATAATTTGTGATTTCAGGGAATTACAAAGTGGGTAAAGACACTT
TTAAGATAGTGTAGAATGACGTTATGCCAATCGATGAAAAGAATTTTTAAAAATTTAGACAATA
ATTTTTAAGTTTTCATGGCATAGGTGCCTTGAAAGCTTAGCGACAGCTATTTATTCTTTTCCTA
GAAAAATGGAGAACTATGTATGGACAGTAATTTGCACACATACTAAGTTTGTAAAGCTCCCAAG
AATGTCTCCATGGATACCAAGTGAAAGTTTCTGTACCACATCTGTAATTCACACACATCTGTAA
TTCACACACATCTGTAATTCACACACAGATACTTAATTATCTCTCCATTGGAGCACGTGTGCAA
CAGCTAATACCTTATGTAGTAGAGAGATTACGTAAGACCATATTCCACTTCTAATAGCATTGCT
GTTGCAAAGGTAAGCATGCATACCAAATATAAAATTACTTGTCAGAATGCTGCCCATTCACAAA
AGAGTCCACATACAAGAAACGCCTCTTACCCCATAAATTATGTCTTGTGTGTTATATATTTAAA
ATTGATTTTTTTGTGAACATTAGATTTTGTATACATTTTACAATAAGGTTTGGCATGACATATA
AATTTCAAGTTAAAAATAACATAAACTAAAATATAAGTTATTTGAGCACCTAGGGGTCTTAGAA
AGAATGTTAAGAAAACTGATTAATTAAAGAATATTGTTGCAGACTTTACCTAA

hide sequence

RefSeq Acc Id:

XM_006505036 ⟹ XP_006505099

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	16,830,926 - 16,856,025 (-)	NCBI
GRCm38	6	16,830,927 - 16,856,028 (-)	NCBI

Sequence:

show sequence

TTAAAGTCCAAGGAAGAAGCAAAGTTCACCTTAGTGCAGAAGTTTCTGTATGCCTCTCCTGGTT
ATTGTTTGCAAGCATAAGGGAAAGAGATGATGAAGGAAAAAGAGAAAACCATCGCAATTGTGAA
GGTTATAGACTCTTCCAAGTTGAAACTGTTATCTGGGAGTATTTTGGATGTGTACAGTGATGAG
CAGGGCATTTCTTCAGCTAATGCTGGTCTCACGGATGCTCCTTGTCCAAGTATTCTACCCATGA
GAAAGGAAATTGCAGAAACTGATGGTAGAGCTTTGGCAAAGGAGAGACAGAAAAAGGACAACCA
CAACCTCATTGAAAGAAGAAGAAGGTATAATATTAATTACCGAATCAAGGAGCTTGGCACTCTT
ATTCCAAAGTCTAATGATCCTGATATGCGCTGGAACAAAGGGACCATTCTAAAGGCATCAGTGG
ACTACATCAAGTGGCTACAAAAAGAACAACAGAGAGCCCGGGAGTTAGAACACAGACAGAAGAA
ATTAGAACATGCTAACCGTCAGCTTAGGCTCCGGATTCAGGAACTAGAAATACAAGCACGTGCT
CATGGTCTACCAATCCTGGCTTCACTCGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGC
AGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACAACTGACTCCAACTCAGGGGACAAG
CCCGGAGTTCTATGAGCAAGCTGTGGCTTTCTCTGATCCATTGTCTCACTTCACAGATTTATCC
TTTAGTGCCGCTTTGAAAGAGGAACAAAGATTGGATGGCATGCTACTAAGTGATACAATATGCC
CCTTTGGGACGGACCCACTACTCTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAG
CAGCCTTAGCTCAGAGGATGGTGATGAGTTGTAAGCCGCAAACAGGCTCAAGACATCAACCAGG
AAGCAACTCTCTGCTGGTGCTACTCAATTGTGATCTGCCTTTCATACCTTGCTTTCACTTAACT
CTCTGAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGAAT
TCATGGGAAGAAGAAACATGATGTGAAAGAATCATTGAAGATCACAGTTGTCTACCGAGTTCAG
ATTTCCTTACATTTATTTTTTTTTCTGGAAAATGGTCCAGCTTGATAACGGCTCTAGTGTTGAT
ACTTTCAGAGCAGTGACATGCTAGGATATTGCTGGAGCTAAGGTCCTTCAAAAGACTGCAACAT
CCCACTCCCCTCTCACTCACGTCCAAATCCTGTGTTACTTTCTACAACATCATTTTCTAAAGAT
TCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGTT
GAATCCTTGTCGGGGGAAAAAAAAAGTATAAATTTTTTTTCATTTAAACTTGAAACTAAGTCTG
AAATAAACATGATTTTTTTCAAAATAGAGCAAAGAATATTTCTTAAAGCAATGTTTTCTAAAAT
CATATTCTCACTCTTTTAATCAGTTCAATGAAATTAACTCTAAACACCTTGCATATTTATGGGC
CTACGGTTTCTTCAGATAAAGCAACACATTGAGGAGTCCCCTCCAAGACATGTCCCTGGATTTT
AATCGTTTTACACAAATACACATGCATACAATGTAGATAGGATCGATTGTTTCTTTCTGCTTCA
TTCCTCTGATGATCTCATCAATGCCATAAACTATATTCACATTTTTTTTTGTTCTTCAAAATAT
GTTGTATAATCAATTTTAGTAATTAAAATATAAAATATTCCCATACTAGGAAAACTTATCTGGT
ATGTAATATGTAATTTAGATATGGATTTCTTATTCATATAGATATCACAAAAATTGATAAGATA
TTGAATATTAGACTATCAACTGATCATCTGTAAGATGGAACTACATTTTATTTTATTCAGATAT
GATTGGAATTATGTGATTTTTCTCTTGAAATTGAGATGACGCTGTGGTTTGGCCTTTGTCACCA
TTTAGTACAATGTAAGTATTTGTATGTATAGTACTTCATTTGTGTTTTCTCTCTTGAATTTTCT
AAACTTTAGGAATTTTATTAGTATACATATTGCTTTGTGTGACATTATGGCTGGACCAAAATGA
ATGATCATGAATCAGTCAACATTGGTGAGGGAATGCTTAAAACTACACTATGCCCTATGAGACT
GTTGGACAGTGAGAAATATATATATATAATATCTGATTCTTGAGGAGGCATGTAACAAACCCAC
ACGAAAACAAACCCGAAAGGTAGAGGGTGTGCAGAATTAAAATCTAATTATATGCTGTGAAGTG
GAAGTGTACAGAGATAATGAAGAAGATTGCAAATTTGAGTGGGAAATGCATTATGTAAAATGCA
CATGTTAGAAAGAAGGGGGTTAATATAGGCACAAATATTAACCAAATTATCGAAGAAAATACAA
GACGGAAATATCCTCCTGGGACATTTGTCTGACAAATCTGTATACCTTCCTTCAGGTGTTGTAG
TGAAAATTAAGTCTAGACTGCAATAATGTAGTAGAGATGAAATTTGTTACTAGAATGGAAAGTT
AGGTAACAAAATTTGTAGTTCTTGGTTGAGTTGTGATCTCTGGAATGTTCAAACAGGCTTAGGA
TTTTGTCCACAATATATCATCAAAATCTCTTTGGTTCTTACGCTATTGAAAATTGATGAAACCC
AAGATCCTTCTGGATAATAGCACTCTATTGCTTACTGTTTATCAGCTATGACTCTGGGATATTA
GAATATTTCACTGTTTGAGATGGAAAAGCCACTTATAATGTCTAGGAATGGCAGTTAAAGTCAG
ATGGGTTGGTTCTATTATTATTTTAGTAATAATGACAAAAGTTTTCCTCAGAGTTGATAATTTG
ATTTGACTTTGCAAATCAAAGGGAAATAAATGCTATATGTCCCATGGAAAACATACTGTTCTAG
CTAGAAGATTATTTCTTTTGTGTTTCTGCTGTTCCACTTTTTATTACATCTAAGGCTTGCATAG
GTGATAGTGTTGTCCTGACATAATTTTCTATCCTTGTCCAAAGAACTAAGGTATCATAGTATTG
GGTAAAATAAGGGCTTGGCAGATTGATCAAGCCTAGATATAAGGTTCTGGAGAAAAGACTAATA
AATTTAATGCTCCATTTATATAATTTGTGATTTCAGGGAATTACAAAGTGGGTAAAGACACTTT
TAAGATAGTGTAGAATGACGTTATGCCAATCGATGAAAAGAATTTTTAAAAATTTAGACAATAA
TTTTTAAGTTTTCATGGCATAGGTGCCTTGAAAGCTTAGCGACAGCTATTTATTCTTTTCCTAG
AAAAATGGAGAACTATGTATGGACAGTAATTTGCACACATACTAAGTTTGTAAAGCTCCCAAGA
ATGTCTCCATGGATACCAAGTGAAAGTTTCTGTACCACATCTGTAATTCACACACATCTGTAAT
TCACACACATCTGTAATTCACACACAGATACTTAATTATCTCTCCATTGGAGCACGTGTGCAAC
AGCTAATACCTTATGTAGTAGAGAGATTACGTAAGACCATATTCCACTTCTAATAGCATTGCTG
TTGCAAAGGTAAGCATGCATACCAAATATAAAATTACTTGTCAGAATGCTGCCCATTCACAAAA
GAGTCCACATACAAGAAACGCCTCTTACCCCATAAATTATGTCTTGTGTGTTATATATTTAAAA
TTGATTTTTTTGTGAACATTAGATTTTGTATACATTTTACAATAAGGTTTGGCATGACATATAA
ATTTCAAGTTAAAAATAACATAAACTAAAATATAAGTTATTTGAGCACCTAGGGGTCTTAGAAA
GAATGTTAAGAAAACTGATTAATTAAAGAATATTGTTGCAGACTTTACCTAA

hide sequence

RefSeq Acc Id:

XM_006505037 ⟹ XP_006505100

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	16,830,926 - 16,856,000 (-)	NCBI
GRCm38	6	16,830,927 - 16,856,002 (-)	NCBI

Sequence:

show sequence

TCACCTTAGTGCAGAAGTTTCTGTATGCCTCTCCTGGTTATTGTTTGCAAGCATAAGGGAAAGA
GATGATGAAGGAAAAAGAGAAAACCATCGCAATTGTGAAGGTTATAGACTCTTCCAAGTTGAAA
CTGTTATCTGGGAGTATTTTGGATGTGTACAGTGATGAGCAGGGCATTTCTTCAGCTAATGCTG
GTCTCACGGATGCTCCTTGTCCAAGTATTCTACCCATGAGAAAGGAAATTGCAGAAACTGATGG
TAGAGCTTTGGCAAAGGAGAGACAGAAAAAGGACAACCACAACCTCAGTGATTGAAAGAAGAAG
AAGGTATAATATTAATTACCGAATCAAGGAGCTTGGCACTCTTATTCCAAAGTCTAATGATCCT
GATATGCGCTGGAACAAAGGGACCATTCTAAAGGCATCAGTGGACTACATCAAGTGGCTACAAA
AAGAACAACAGAGAGCCCGGGAGTTAGAACACAGACAGAAGAAATTAGAACATGCTAACCGTCA
GCTTAGGCTCCGGATTCAGGAACTAGAAATACAAGCACGTGCTCATGGTCTACCAATCCTGGCT
TCACTCGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACT
TAGGAGGCTGTTGCTTACAACTGACTCCAACTCAGGGGACAAGCCCGGAGTTCTATGAGCAAGC
TGTGGCTTTCTCTGATCCATTGTCTCACTTCACAGATTTATCCTTTAGTGCCGCTTTGAAAGAG
GAACAAAGATTGGATGGCATGCTACTAAGTGATACAATATGCCCCTTTGGGACGGACCCACTAC
TCTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTCAGAGGATGG
TGATGAGTTGTAAGCCGCAAACAGGCTCAAGACATCAACCAGGAAGCAACTCTCTGCTGGTGCT
ACTCAATTGTGATCTGCCTTTCATACCTTGCTTTCACTTAACTCTCTGAAAGGAATTATATTGG
CCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGAATTCATGGGAAGAAGAAACATGA
TGTGAAAGAATCATTGAAGATCACAGTTGTCTACCGAGTTCAGATTTCCTTACATTTATTTTTT
TTTCTGGAAAATGGTCCAGCTTGATAACGGCTCTAGTGTTGATACTTTCAGAGCAGTGACATGC
TAGGATATTGCTGGAGCTAAGGTCCTTCAAAAGACTGCAACATCCCACTCCCCTCTCACTCACG
TCCAAATCCTGTGTTACTTTCTACAACATCATTTTCTAAAGATTCACGACTAACAAATTTGGTG
ATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGTTGAATCCTTGTCGGGGGAAAAA
AAAAGTATAAATTTTTTTTCATTTAAACTTGAAACTAAGTCTGAAATAAACATGATTTTTTTCA
AAATAGAGCAAAGAATATTTCTTAAAGCAATGTTTTCTAAAATCATATTCTCACTCTTTTAATC
AGTTCAATGAAATTAACTCTAAACACCTTGCATATTTATGGGCCTACGGTTTCTTCAGATAAAG
CAACACATTGAGGAGTCCCCTCCAAGACATGTCCCTGGATTTTAATCGTTTTACACAAATACAC
ATGCATACAATGTAGATAGGATCGATTGTTTCTTTCTGCTTCATTCCTCTGATGATCTCATCAA
TGCCATAAACTATATTCACATTTTTTTTTGTTCTTCAAAATATGTTGTATAATCAATTTTAGTA
ATTAAAATATAAAATATTCCCATACTAGGAAAACTTATCTGGTATGTAATATGTAATTTAGATA
TGGATTTCTTATTCATATAGATATCACAAAAATTGATAAGATATTGAATATTAGACTATCAACT
GATCATCTGTAAGATGGAACTACATTTTATTTTATTCAGATATGATTGGAATTATGTGATTTTT
CTCTTGAAATTGAGATGACGCTGTGGTTTGGCCTTTGTCACCATTTAGTACAATGTAAGTATTT
GTATGTATAGTACTTCATTTGTGTTTTCTCTCTTGAATTTTCTAAACTTTAGGAATTTTATTAG
TATACATATTGCTTTGTGTGACATTATGGCTGGACCAAAATGAATGATCATGAATCAGTCAACA
TTGGTGAGGGAATGCTTAAAACTACACTATGCCCTATGAGACTGTTGGACAGTGAGAAATATAT
ATATATAATATCTGATTCTTGAGGAGGCATGTAACAAACCCACACGAAAACAAACCCGAAAGGT
AGAGGGTGTGCAGAATTAAAATCTAATTATATGCTGTGAAGTGGAAGTGTACAGAGATAATGAA
GAAGATTGCAAATTTGAGTGGGAAATGCATTATGTAAAATGCACATGTTAGAAAGAAGGGGGTT
AATATAGGCACAAATATTAACCAAATTATCGAAGAAAATACAAGACGGAAATATCCTCCTGGGA
CATTTGTCTGACAAATCTGTATACCTTCCTTCAGGTGTTGTAGTGAAAATTAAGTCTAGACTGC
AATAATGTAGTAGAGATGAAATTTGTTACTAGAATGGAAAGTTAGGTAACAAAATTTGTAGTTC
TTGGTTGAGTTGTGATCTCTGGAATGTTCAAACAGGCTTAGGATTTTGTCCACAATATATCATC
AAAATCTCTTTGGTTCTTACGCTATTGAAAATTGATGAAACCCAAGATCCTTCTGGATAATAGC
ACTCTATTGCTTACTGTTTATCAGCTATGACTCTGGGATATTAGAATATTTCACTGTTTGAGAT
GGAAAAGCCACTTATAATGTCTAGGAATGGCAGTTAAAGTCAGATGGGTTGGTTCTATTATTAT
TTTAGTAATAATGACAAAAGTTTTCCTCAGAGTTGATAATTTGATTTGACTTTGCAAATCAAAG
GGAAATAAATGCTATATGTCCCATGGAAAACATACTGTTCTAGCTAGAAGATTATTTCTTTTGT
GTTTCTGCTGTTCCACTTTTTATTACATCTAAGGCTTGCATAGGTGATAGTGTTGTCCTGACAT
AATTTTCTATCCTTGTCCAAAGAACTAAGGTATCATAGTATTGGGTAAAATAAGGGCTTGGCAG
ATTGATCAAGCCTAGATATAAGGTTCTGGAGAAAAGACTAATAAATTTAATGCTCCATTTATAT
AATTTGTGATTTCAGGGAATTACAAAGTGGGTAAAGACACTTTTAAGATAGTGTAGAATGACGT
TATGCCAATCGATGAAAAGAATTTTTAAAAATTTAGACAATAATTTTTAAGTTTTCATGGCATA
GGTGCCTTGAAAGCTTAGCGACAGCTATTTATTCTTTTCCTAGAAAAATGGAGAACTATGTATG
GACAGTAATTTGCACACATACTAAGTTTGTAAAGCTCCCAAGAATGTCTCCATGGATACCAAGT
GAAAGTTTCTGTACCACATCTGTAATTCACACACATCTGTAATTCACACACATCTGTAATTCAC
ACACAGATACTTAATTATCTCTCCATTGGAGCACGTGTGCAACAGCTAATACCTTATGTAGTAG
AGAGATTACGTAAGACCATATTCCACTTCTAATAGCATTGCTGTTGCAAAGGTAAGCATGCATA
CCAAATATAAAATTACTTGTCAGAATGCTGCCCATTCACAAAAGAGTCCACATACAAGAAACGC
CTCTTACCCCATAAATTATGTCTTGTGTGTTATATATTTAAAATTGATTTTTTTGTGAACATTA
GATTTTGTATACATTTTACAATAAGGTTTGGCATGACATATAAATTTCAAGTTAAAAATAACAT
AAACTAAAATATAAGTTATTTGAGCACCTAGGGGTCTTAGAAAGAATGTTAAGAAAACTGATTA
ATTAAAGAATATTGTTGCAGACTTTACCTAA

hide sequence

RefSeq Acc Id:

XM_011241053 ⟹ XP_011239355

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	16,830,926 - 16,898,463 (-)	NCBI
GRCm38	6	16,830,927 - 16,898,464 (-)	NCBI

Sequence:

show sequence

CTGAAATTCCAACCAGAGTCCAGGAAATGCCCTAATGGGTGACTTCTCTTTTCTCCTTCCTCAA
CTAAGCGGATTCCAAGCTGTTCAAACCATTTATTCTTCTTGAGCAGACCCTTGACTTTTGTGCT
TAGGTTATGAGACGAGGGGCTGTAATTTGGAGCTGTTTGTAGCCGCGATGACACACCTAGAATC
CAATCAGTGCTGAGGATAAGGCATCACAGAGAGATGGACTGACCCAGGGCAAGTCTCCTGAGAT
GCTCATCCCATACATTAGATCATACCCTCCAATGGTCCAGGCACACGTAGAAACCTCTACGAAG
CCTCAGCTACAGAAGGCTCAAACACAACAAGTAACTCCTTTCATGACCTTTGACTGTCGGGTAT
GCGACCAGACTCTCAAGAGAGCGCAGCCTCCAGCAGCCAGCTGCATGCCTCTGGCAGAGCATGA
ACCCATGAGCCCAGACAGTGATGCTGGCTGTGCAGGAAACCCATTCACAAATCTGCTGGCTCTT
GGGAAAAAAGATGGTGCTGAGAAATGGCATTTATCTGGGAGTATTTTGGATGTGTACAGTGATG
AGCAGGGCATTTCTTCAGCTAATGCTGGTCTCACGGATGCTCCTTGTCCAAGTATTCTACCCAT
GAGAAAGGAAATTGCAGTTGAAAGAAGAAGAAGGTATAATATTAATTACCGAATCAAGGAGCTT
GGCACTCTTATTCCAAAGTCTAATGATCCTGATATGCGCTGGAACAAAGGGACCATTCTAAAGG
CATCAGTGGACTACATCAAGTGGCTACAAAAAGAACAACAGAGAGCCCGGGAGTTAGAACACAG
ACAGAAGAAATTAGAACATGCTAACCGTCAGCTTAGGCTCCGGATTCAGGAACTAGAAATACAA
GCACGTGCTCATGGTCTACCAATCCTGGCTTCACTCGGCACAGCTGATGTTGGTACCCACATCA
CCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACAACTGACTCCAACTCA
GGGGACAAGCCCGGAGTTCTATGAGCAAGCTGTGGCTTTCTCTGATCCATTGTCTCACTTCACA
GATTTATCCTTTAGTGCCGCTTTGAAAGAGGAACAAAGATTGGATGGCATGCTACTAAGTGATA
CAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAG
CAGCCGAAGCAGCCTTAGCTCAGAGGATGGTGATGAGTTGTAAGCCGCAAACAGGCTCAAGACA
TCAACCAGGAAGCAACTCTCTGCTGGTGCTACTCAATTGTGATCTGCCTTTCATACCTTGCTTT
CACTTAACTCTCTGAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGC
TGGAAGAATTCATGGGAAGAAGAAACATGATGTGAAAGAATCATTGAAGATCACAGTTGTCTAC
CGAGTTCAGATTTCCTTACATTTATTTTTTTTTCTGGAAAATGGTCCAGCTTGATAACGGCTCT
AGTGTTGATACTTTCAGAGCAGTGACATGCTAGGATATTGCTGGAGCTAAGGTCCTTCAAAAGA
CTGCAACATCCCACTCCCCTCTCACTCACGTCCAAATCCTGTGTTACTTTCTACAACATCATTT
TCTAAAGATTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATACTA
TGTATGGTTGAATCCTTGTCGGGGGAAAAAAAAAGTATAAATTTTTTTTCATTTAAACTTGAAA
CTAAGTCTGAAATAAACATGATTTTTTTCAAAATAGAGCAAAGAATATTTCTTAAAGCAATGTT
TTCTAAAATCATATTCTCACTCTTTTAATCAGTTCAATGAAATTAACTCTAAACACCTTGCATA
TTTATGGGCCTACGGTTTCTTCAGATAAAGCAACACATTGAGGAGTCCCCTCCAAGACATGTCC
CTGGATTTTAATCGTTTTACACAAATACACATGCATACAATGTAGATAGGATCGATTGTTTCTT
TCTGCTTCATTCCTCTGATGATCTCATCAATGCCATAAACTATATTCACATTTTTTTTTGTTCT
TCAAAATATGTTGTATAATCAATTTTAGTAATTAAAATATAAAATATTCCCATACTAGGAAAAC
TTATCTGGTATGTAATATGTAATTTAGATATGGATTTCTTATTCATATAGATATCACAAAAATT
GATAAGATATTGAATATTAGACTATCAACTGATCATCTGTAAGATGGAACTACATTTTATTTTA
TTCAGATATGATTGGAATTATGTGATTTTTCTCTTGAAATTGAGATGACGCTGTGGTTTGGCCT
TTGTCACCATTTAGTACAATGTAAGTATTTGTATGTATAGTACTTCATTTGTGTTTTCTCTCTT
GAATTTTCTAAACTTTAGGAATTTTATTAGTATACATATTGCTTTGTGTGACATTATGGCTGGA
CCAAAATGAATGATCATGAATCAGTCAACATTGGTGAGGGAATGCTTAAAACTACACTATGCCC
TATGAGACTGTTGGACAGTGAGAAATATATATATATAATATCTGATTCTTGAGGAGGCATGTAA
CAAACCCACACGAAAACAAACCCGAAAGGTAGAGGGTGTGCAGAATTAAAATCTAATTATATGC
TGTGAAGTGGAAGTGTACAGAGATAATGAAGAAGATTGCAAATTTGAGTGGGAAATGCATTATG
TAAAATGCACATGTTAGAAAGAAGGGGGTTAATATAGGCACAAATATTAACCAAATTATCGAAG
AAAATACAAGACGGAAATATCCTCCTGGGACATTTGTCTGACAAATCTGTATACCTTCCTTCAG
GTGTTGTAGTGAAAATTAAGTCTAGACTGCAATAATGTAGTAGAGATGAAATTTGTTACTAGAA
TGGAAAGTTAGGTAACAAAATTTGTAGTTCTTGGTTGAGTTGTGATCTCTGGAATGTTCAAACA
GGCTTAGGATTTTGTCCACAATATATCATCAAAATCTCTTTGGTTCTTACGCTATTGAAAATTG
ATGAAACCCAAGATCCTTCTGGATAATAGCACTCTATTGCTTACTGTTTATCAGCTATGACTCT
GGGATATTAGAATATTTCACTGTTTGAGATGGAAAAGCCACTTATAATGTCTAGGAATGGCAGT
TAAAGTCAGATGGGTTGGTTCTATTATTATTTTAGTAATAATGACAAAAGTTTTCCTCAGAGTT
GATAATTTGATTTGACTTTGCAAATCAAAGGGAAATAAATGCTATATGTCCCATGGAAAACATA
CTGTTCTAGCTAGAAGATTATTTCTTTTGTGTTTCTGCTGTTCCACTTTTTATTACATCTAAGG
CTTGCATAGGTGATAGTGTTGTCCTGACATAATTTTCTATCCTTGTCCAAAGAACTAAGGTATC
ATAGTATTGGGTAAAATAAGGGCTTGGCAGATTGATCAAGCCTAGATATAAGGTTCTGGAGAAA
AGACTAATAAATTTAATGCTCCATTTATATAATTTGTGATTTCAGGGAATTACAAAGTGGGTAA
AGACACTTTTAAGATAGTGTAGAATGACGTTATGCCAATCGATGAAAAGAATTTTTAAAAATTT
AGACAATAATTTTTAAGTTTTCATGGCATAGGTGCCTTGAAAGCTTAGCGACAGCTATTTATTC
TTTTCCTAGAAAAATGGAGAACTATGTATGGACAGTAATTTGCACACATACTAAGTTTGTAAAG
CTCCCAAGAATGTCTCCATGGATACCAAGTGAAAGTTTCTGTACCACATCTGTAATTCACACAC
ATCTGTAATTCACACACATCTGTAATTCACACACAGATACTTAATTATCTCTCCATTGGAGCAC
GTGTGCAACAGCTAATACCTTATGTAGTAGAGAGATTACGTAAGACCATATTCCACTTCTAATA
GCATTGCTGTTGCAAAGGTAAGCATGCATACCAAATATAAAATTACTTGTCAGAATGCTGCCCA
TTCACAAAAGAGTCCACATACAAGAAACGCCTCTTACCCCATAAATTATGTCTTGTGTGTTATA
TATTTAAAATTGATTTTTTTGTGAACATTAGATTTTGTATACATTTTACAATAAGGTTTGGCAT
GACATATAAATTTCAAGTTAAAAATAACATAAACTAAAATATAAGTTATTTGAGCACCTAGGGG
TCTTAGAAAGAATGTTAAGAAAACTGATTAATTAAAGAATATTGTTGCAGACTTTACCTAA

hide sequence

RefSeq Acc Id:

XM_017321504 ⟹ XP_017176993

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	16,830,926 - 16,898,461 (-)	NCBI
GRCm38	6	16,830,927 - 16,898,462 (-)	NCBI

Sequence:

show sequence

GAAATTCCAACCAGAGTCCAGGAAATGCCCTAATGGGTGACTTCTCTTTTCTCCTTCCTCAACT
AAGCGGATTCCAAGCTGTTCAAACCATTTATTCTTCTTGAGCAGACCCTTGACTTTTGTGCTTA
GGTTATGAGACGAGGGGCTGTAATTTGGAGCTGTTTGTAGCCGCGATGACACACCTAGAATCCA
ATCAGTGCTGGTCCAGGCACACGTAGAAACCTCTACGAAGCCTCAGCTACAGAAGGCTCAAACA
CAACAAGTAACTCCTTTCATGACCTTTGACTGTCGGGTATGCGACCAGACTCTCAAGAGAGCGC
AGCCTCCAGCAGCCAGCTGCATGCCTCTGGCAGAGCATGAACCCATGAGCCCAGACAGTGATGC
TGGCTGTGCAGGAAACCCATTCACAAATCTGCTGGCTCTTGGGAAAAAAGATGGTGCTGAGAAA
TGGCATTTATCTGGGAGTATTTTGGATGTGTACAGTGATGAGCAGGGCATTTCTTCAGCTAATG
CTGGTCTCACGGATGCTCCTTGTCCAAGTATTCTACCCATGAGAAAGGAAATTGCAGAAACTGA
TGGTAGAGCTTTGGCAAAGGAGAGACAGAAAAAGGACAACCACAACCTCAGTGATTGAAAGAAG
AAGAAGGTATAATATTAATTACCGAATCAAGGAGCTTGGCACTCTTATTCCAAAGTCTAATGAT
CCTGATATGCGCTGGAACAAAGGGACCATTCTAAAGGCATCAGTGGACTACATCAAGTGGCTAC
AAAAAGAACAACAGAGAGCCCGGGAGTTAGAACACAGACAGAAGAAATTAGAACATGCTAACCG
TCAGCTTAGGCTCCGGATTCAGGAACTAGAAATACAAGCACGTGCTCATGGTCTACCAATCCTG
GCTTCACTCGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGA
ACTTAGGAGGCTGTTGCTTACAACTGACTCCAACTCAGGGGACAAGCCCGGAGTTCTATGAGCA
AGCTGTGGCTTTCTCTGATCCATTGTCTCACTTCACAGATTTATCCTTTAGTGCCGCTTTGAAA
GAGGAACAAAGATTGGATGGCATGCTACTAAGTGATACAATATGCCCCTTTGGGACGGACCCAC
TACTCTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTCAGAGGA
TGGTGATGAGTTGTAAGCCGCAAACAGGCTCAAGACATCAACCAGGAAGCAACTCTCTGCTGGT
GCTACTCAATTGTGATCTGCCTTTCATACCTTGCTTTCACTTAACTCTCTGAAAGGAATTATAT
TGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGAATTCATGGGAAGAAGAAACA
TGATGTGAAAGAATCATTGAAGATCACAGTTGTCTACCGAGTTCAGATTTCCTTACATTTATTT
TTTTTTCTGGAAAATGGTCCAGCTTGATAACGGCTCTAGTGTTGATACTTTCAGAGCAGTGACA
TGCTAGGATATTGCTGGAGCTAAGGTCCTTCAAAAGACTGCAACATCCCACTCCCCTCTCACTC
ACGTCCAAATCCTGTGTTACTTTCTACAACATCATTTTCTAAAGATTCACGACTAACAAATTTG
GTGATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGTTGAATCCTTGTCGGGGGAA
AAAAAAAGTATAAATTTTTTTTCATTTAAACTTGAAACTAAGTCTGAAATAAACATGATTTTTT
TCAAAATAGAGCAAAGAATATTTCTTAAAGCAATGTTTTCTAAAATCATATTCTCACTCTTTTA
ATCAGTTCAATGAAATTAACTCTAAACACCTTGCATATTTATGGGCCTACGGTTTCTTCAGATA
AAGCAACACATTGAGGAGTCCCCTCCAAGACATGTCCCTGGATTTTAATCGTTTTACACAAATA
CACATGCATACAATGTAGATAGGATCGATTGTTTCTTTCTGCTTCATTCCTCTGATGATCTCAT
CAATGCCATAAACTATATTCACATTTTTTTTTGTTCTTCAAAATATGTTGTATAATCAATTTTA
GTAATTAAAATATAAAATATTCCCATACTAGGAAAACTTATCTGGTATGTAATATGTAATTTAG
ATATGGATTTCTTATTCATATAGATATCACAAAAATTGATAAGATATTGAATATTAGACTATCA
ACTGATCATCTGTAAGATGGAACTACATTTTATTTTATTCAGATATGATTGGAATTATGTGATT
TTTCTCTTGAAATTGAGATGACGCTGTGGTTTGGCCTTTGTCACCATTTAGTACAATGTAAGTA
TTTGTATGTATAGTACTTCATTTGTGTTTTCTCTCTTGAATTTTCTAAACTTTAGGAATTTTAT
TAGTATACATATTGCTTTGTGTGACATTATGGCTGGACCAAAATGAATGATCATGAATCAGTCA
ACATTGGTGAGGGAATGCTTAAAACTACACTATGCCCTATGAGACTGTTGGACAGTGAGAAATA
TATATATATAATATCTGATTCTTGAGGAGGCATGTAACAAACCCACACGAAAACAAACCCGAAA
GGTAGAGGGTGTGCAGAATTAAAATCTAATTATATGCTGTGAAGTGGAAGTGTACAGAGATAAT
GAAGAAGATTGCAAATTTGAGTGGGAAATGCATTATGTAAAATGCACATGTTAGAAAGAAGGGG
GTTAATATAGGCACAAATATTAACCAAATTATCGAAGAAAATACAAGACGGAAATATCCTCCTG
GGACATTTGTCTGACAAATCTGTATACCTTCCTTCAGGTGTTGTAGTGAAAATTAAGTCTAGAC
TGCAATAATGTAGTAGAGATGAAATTTGTTACTAGAATGGAAAGTTAGGTAACAAAATTTGTAG
TTCTTGGTTGAGTTGTGATCTCTGGAATGTTCAAACAGGCTTAGGATTTTGTCCACAATATATC
ATCAAAATCTCTTTGGTTCTTACGCTATTGAAAATTGATGAAACCCAAGATCCTTCTGGATAAT
AGCACTCTATTGCTTACTGTTTATCAGCTATGACTCTGGGATATTAGAATATTTCACTGTTTGA
GATGGAAAAGCCACTTATAATGTCTAGGAATGGCAGTTAAAGTCAGATGGGTTGGTTCTATTAT
TATTTTAGTAATAATGACAAAAGTTTTCCTCAGAGTTGATAATTTGATTTGACTTTGCAAATCA
AAGGGAAATAAATGCTATATGTCCCATGGAAAACATACTGTTCTAGCTAGAAGATTATTTCTTT
TGTGTTTCTGCTGTTCCACTTTTTATTACATCTAAGGCTTGCATAGGTGATAGTGTTGTCCTGA
CATAATTTTCTATCCTTGTCCAAAGAACTAAGGTATCATAGTATTGGGTAAAATAAGGGCTTGG
CAGATTGATCAAGCCTAGATATAAGGTTCTGGAGAAAAGACTAATAAATTTAATGCTCCATTTA
TATAATTTGTGATTTCAGGGAATTACAAAGTGGGTAAAGACACTTTTAAGATAGTGTAGAATGA
CGTTATGCCAATCGATGAAAAGAATTTTTAAAAATTTAGACAATAATTTTTAAGTTTTCATGGC
ATAGGTGCCTTGAAAGCTTAGCGACAGCTATTTATTCTTTTCCTAGAAAAATGGAGAACTATGT
ATGGACAGTAATTTGCACACATACTAAGTTTGTAAAGCTCCCAAGAATGTCTCCATGGATACCA
AGTGAAAGTTTCTGTACCACATCTGTAATTCACACACATCTGTAATTCACACACATCTGTAATT
CACACACAGATACTTAATTATCTCTCCATTGGAGCACGTGTGCAACAGCTAATACCTTATGTAG
TAGAGAGATTACGTAAGACCATATTCCACTTCTAATAGCATTGCTGTTGCAAAGGTAAGCATGC
ATACCAAATATAAAATTACTTGTCAGAATGCTGCCCATTCACAAAAGAGTCCACATACAAGAAA
CGCCTCTTACCCCATAAATTATGTCTTGTGTGTTATATATTTAAAATTGATTTTTTTGTGAACA
TTAGATTTTGTATACATTTTACAATAAGGTTTGGCATGACATATAAATTTCAAGTTAAAAATAA
CATAAACTAAAATATAAGTTATTTGAGCACCTAGGGGTCTTAGAAAGAATGTTAAGAAAACTGA
TTAATTAAAGAATATTGTTGCAGACTTTACCTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_112475	(Get FASTA)	NCBI Sequence Viewer
	XP_006505098	(Get FASTA)	NCBI Sequence Viewer
	XP_006505099	(Get FASTA)	NCBI Sequence Viewer
	XP_006505100	(Get FASTA)	NCBI Sequence Viewer
	XP_011239355	(Get FASTA)	NCBI Sequence Viewer
	XP_017176993	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD24426	(Get FASTA)	NCBI Sequence Viewer
	AAH98494	(Get FASTA)	NCBI Sequence Viewer
	BAE23248	(Get FASTA)	NCBI Sequence Viewer
	BAE33676	(Get FASTA)	NCBI Sequence Viewer
	BAE34087	(Get FASTA)	NCBI Sequence Viewer
	BAE35199	(Get FASTA)	NCBI Sequence Viewer
	EDL13894	(Get FASTA)	NCBI Sequence Viewer
	EDL13895	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000031533
	ENSMUSP00000031533.8
	ENSMUSP00000143880.2
	ENSMUSP00000144445.2
GenBank Protein	Q9WTW4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_112475 ⟸ NM_031198

- UniProtKB:

Q3TWR7 (UniProtKB/Swiss-Prot), Q9WTW4 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MTFDCRVCDQTLKRAQPPAASCMPLAEHEPMSPDSDAGCAGNPFTNLLALGKKDGAEKWHLSGS
ILDVYSDEQGISSANAGLTDAPCPSILPMRKEIAETDGRALAKERQKKDNHNLIERRRRYNINY
RIKELGTLIPKSNDPDMRWNKGTILKASVDYIKWLQKEQQRARELEHRQKKLEHANRQLRLRIQ
ELEIQARAHGLPILASLGTADVGTHITKQQTHPERNLGGCCLQLTPTQGTSPEFYEQAVAFSDP
LSHFTDLSFSAALKEEQRLDGMLLSDTICPFGTDPLLSAISPAVSKASSRSSLSSEDGDEL

hide sequence

RefSeq Acc Id:

XP_006505098 ⟸ XM_006505035

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLIPYIRSYPPMVQAHVETSTKPQLQKAQTQQVTPFMTFDCRVCDQTLKRAQPPAASCMPLAEH
EPMSPDSDAGCAGNPFTNLLALGKKDGAEKWHLSGSILDVYSDEQGISSANAGLTDAPCPSILP
MRKEIAETDGRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKAS
VDYIKWLQKEQQRARELEHRQKKLEHANRQLRLRIQELEIQARAHGLPILASLGTADVGTHITK
QQTHPERNLGGCCLQLTPTQGTSPEFYEQAVAFSDPLSHFTDLSFSAALKEEQRLDGMLLSDTI
CPFGTDPLLSAISPAVSKASSRSSLSSEDGDEL

hide sequence

RefSeq Acc Id:

XP_006505099 ⟸ XM_006505036

- Peptide Label:

isoform X3

- Sequence:

show sequence

MMKEKEKTIAIVKVIDSSKLKLLSGSILDVYSDEQGISSANAGLTDAPCPSILPMRKEIAETDG
RALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVDYIKWLQKE
QQRARELEHRQKKLEHANRQLRLRIQELEIQARAHGLPILASLGTADVGTHITKQQTHPERNLG
GCCLQLTPTQGTSPEFYEQAVAFSDPLSHFTDLSFSAALKEEQRLDGMLLSDTICPFGTDPLLS
AISPAVSKASSRSSLSSEDGDEL

hide sequence

RefSeq Acc Id:

XP_006505100 ⟸ XM_006505037

- Peptide Label:

isoform X4

- Sequence:

show sequence

MVELWQRRDRKRTTTTSVIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVDYIKWL
QKEQQRARELEHRQKKLEHANRQLRLRIQELEIQARAHGLPILASLGTADVGTHITKQQTHPER
NLGGCCLQLTPTQGTSPEFYEQAVAFSDPLSHFTDLSFSAALKEEQRLDGMLLSDTICPFGTDP
LLSAISPAVSKASSRSSLSSEDGDEL

hide sequence

RefSeq Acc Id:

XP_011239355 ⟸ XM_011241053

- Peptide Label:

isoform X2

- Sequence:

show sequence

MLIPYIRSYPPMVQAHVETSTKPQLQKAQTQQVTPFMTFDCRVCDQTLKRAQPPAASCMPLAEH
EPMSPDSDAGCAGNPFTNLLALGKKDGAEKWHLSGSILDVYSDEQGISSANAGLTDAPCPSILP
MRKEIAVERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVDYIKWLQKEQQRARELEH
RQKKLEHANRQLRLRIQELEIQARAHGLPILASLGTADVGTHITKQQTHPERNLGGCCLQLTPT
QGTSPEFYEQAVAFSDPLSHFTDLSFSAALKEEQRLDGMLLSDTICPFGTDPLLSAISPAVSKA
SSRSSLSSEDGDEL

hide sequence

RefSeq Acc Id:

XP_017176993 ⟸ XM_017321504

- Peptide Label:

isoform X4

- Sequence:

show sequence

MVELWQRRDRKRTTTTSVIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVDYIKWL
QKEQQRARELEHRQKKLEHANRQLRLRIQELEIQARAHGLPILASLGTADVGTHITKQQTHPER
NLGGCCLQLTPTQGTSPEFYEQAVAFSDPLSHFTDLSFSAALKEEQRLDGMLLSDTICPFGTDP
LLSAISPAVSKASSRSSLSSEDGDEL

hide sequence

Ensembl Acc Id:

ENSMUSP00000031533 ⟸ ENSMUST00000031533

Ensembl Acc Id:

ENSMUSP00000143880 ⟸ ENSMUST00000202997

Ensembl Acc Id:

ENSMUSP00000144445 ⟸ ENSMUST00000201406

Protein Domains

bHLH

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9WTW4-F1-model_v2	AlphaFold	Q9WTW4	1-317	view protein structure

Promoters

RGD ID:

6840058

Promoter ID:

MM_KWN:45211

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour

Transcripts:

NM_031198, NM_031198_TCFEC, UC009AZF.1, UC009AZG.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	16,848,146 - 16,848,646 (-)	MPROMDB

RGD ID:

6889046

Promoter ID:

EPDNEW_M7974

Type:

single initiation site

Name:

Tfec_2

Description:

Mus musculus transcription factor EC , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M7975

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	6	16,877,013 - 16,877,073	EPDNEW

RGD ID:

6889048

Promoter ID:

EPDNEW_M7975

Type:

initiation region

Name:

Tfec_1

Description:

Mus musculus transcription factor EC , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M7974

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	6	16,898,373 - 16,898,433	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1333760	AgrOrtholog
Ensembl Genes	ENSMUSG00000029553	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000031533	ENTREZGENE
	ENSMUST00000031533.11	UniProtKB/Swiss-Prot
	ENSMUST00000201406.2	UniProtKB/TrEMBL
	ENSMUST00000202997.2	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.170	UniProtKB/TrEMBL
	4.10.280.10	UniProtKB/Swiss-Prot
InterPro	bHLH_dom	UniProtKB/Swiss-Prot
	HLH_DNA-bd_sf	UniProtKB/Swiss-Prot
	MiT/TFE_C	UniProtKB/Swiss-Prot
KEGG Report	mmu:21426	UniProtKB/Swiss-Prot
MGD	MGI:1333760	ENTREZGENE
NCBI Gene	21426	ENTREZGENE
PANTHER	MIP04163P	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR45776:SF1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	DUF3371	UniProtKB/Swiss-Prot
	HLH	UniProtKB/Swiss-Prot
PhenoGen	Tfec	PhenoGen
PROSITE	BHLH	UniProtKB/Swiss-Prot
SMART	HLH	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF47459	UniProtKB/Swiss-Prot
UniProt	A0A0J9YTW5_MOUSE	UniProtKB/TrEMBL
	A0A0J9YV19_MOUSE	UniProtKB/TrEMBL
	Q3TWR7	ENTREZGENE
	Q3TZX0_MOUSE	UniProtKB/TrEMBL
	Q9WTW4	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q3TWR7	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-10-25	Tfec	transcription factor EC	Tcfec	transcription factor EC	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Mammalian Phenotype