Eaf2 (ELL associated factor 2) - Rat Genome Database

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Gene: Eaf2 (ELL associated factor 2) Mus musculus
Analyze
Symbol: Eaf2
Name: ELL associated factor 2
RGD ID: 733786
MGI Page MGI
Description: Predicted to enable transcription elongation factor activity. Acts upstream of or within negative regulation of cell growth; negative regulation of epithelial cell proliferation involved in prostate gland development; and positive regulation of DNA-templated transcription. Located in nucleoplasm. Is expressed in several structures, including genitourinary system; integumental system; nervous system; sensory organ; and tooth. Orthologous to human EAF2 (ELL associated factor 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AW048865; ehrlich S-II transcriptional activator factor; ELL-associated factor 2; Fes; FEST; Festa; FESTA-L; FESTA-S; testosterone regulated apoptosis inducer and tumor suppressor; testosterone-regulated apoptosis inducer and tumor suppressor protein; Tr; Traits; U19
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391636,613,246 - 36,695,275 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1636,613,246 - 36,695,365 (-)EnsemblGRCm39 Ensembl
GRCm381636,792,884 - 36,875,068 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1636,792,884 - 36,875,003 (-)EnsemblGRCm38mm10GRCm38
MGSCv371636,792,970 - 36,874,912 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361636,712,123 - 36,794,065 (-)NCBIMGSCv36mm8
Celera1637,203,320 - 37,285,700 (-)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1626.05NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2-palmitoylglycerol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-phenylprop-2-enal  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
antimycin A  (ISO)
Aroclor 1254  (ISO)
belinostat  (ISO)
Benoxacor  (EXP)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
choline  (EXP)
cisplatin  (ISO)
clothianidin  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
dimethyl sulfoxide  (ISO)
dimethylarsinic acid  (EXP)
dorsomorphin  (ISO)
dutasteride  (ISO)
entinostat  (ISO)
finasteride  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
gentamycin  (ISO)
L-methionine  (EXP)
linsidomine  (ISO)
lovastatin  (ISO)
manganese(II) chloride  (ISO)
mercury dibromide  (ISO)
methyl methanesulfonate  (ISO)
methylarsonic acid  (EXP)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
niclosamide  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
pirinixic acid  (EXP)
progesterone  (ISO)
quercetin  (ISO)
SB 431542  (ISO)
simvastatin  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
testosterone  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
trimellitic anhydride  (EXP)
triptonide  (EXP)
valproic acid  (EXP,ISO)
vorinostat  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. The super elongation complex (SEC) family in transcriptional control. Luo Z, etal., Nat Rev Mol Cell Biol. 2012 Sep;13(9):543-7. doi: 10.1038/nrm3417. Epub 2012 Aug 16.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Suppression of prostate tumor growth by U19, a novel testosterone-regulated apoptosis inducer. Xiao W, etal., Cancer Res 2003 Aug 1;63(15):4698-704.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12761297   PMID:14517999   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:17873910   PMID:17892859   PMID:18799693   PMID:18803460   PMID:19258512   PMID:19826414   PMID:20564326   PMID:21638067   PMID:21677750   PMID:21873635   PMID:21905163   PMID:23708662  
PMID:24260246   PMID:26328919   PMID:26935903   PMID:27721405   PMID:29029019   PMID:31229879  


Genomics

Comparative Map Data
Eaf2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391636,613,246 - 36,695,275 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1636,613,246 - 36,695,365 (-)EnsemblGRCm39 Ensembl
GRCm381636,792,884 - 36,875,068 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1636,792,884 - 36,875,003 (-)EnsemblGRCm38mm10GRCm38
MGSCv371636,792,970 - 36,874,912 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361636,712,123 - 36,794,065 (-)NCBIMGSCv36mm8
Celera1637,203,320 - 37,285,700 (-)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1626.05NCBI
EAF2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383121,835,209 - 121,886,526 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3121,835,183 - 121,886,526 (+)EnsemblGRCh38hg38GRCh38
GRCh373121,554,056 - 121,605,373 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363123,036,724 - 123,088,063 (+)NCBINCBI36Build 36hg18NCBI36
Build 343123,036,723 - 123,088,062NCBI
Celera3119,963,909 - 120,015,222 (+)NCBICelera
Cytogenetic Map3q13.33NCBI
HuRef3118,928,117 - 118,979,418 (+)NCBIHuRef
CHM1_13121,517,515 - 121,569,414 (+)NCBICHM1_1
T2T-CHM13v2.03124,555,203 - 124,606,495 (+)NCBIT2T-CHM13v2.0
Eaf2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81177,465,585 - 77,509,993 (+)NCBIGRCr8
mRatBN7.21163,960,200 - 64,004,610 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1163,960,200 - 64,004,610 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1172,772,600 - 72,817,008 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01165,434,824 - 65,479,238 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01164,469,113 - 64,510,223 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01166,878,658 - 66,923,092 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1166,878,658 - 66,923,092 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01169,969,912 - 70,013,412 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41165,763,410 - 65,809,967 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11165,820,998 - 65,867,556 (+)NCBI
Celera1163,432,421 - 63,474,673 (+)NCBICelera
Cytogenetic Map11q21NCBI
Eaf2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542721,172,009 - 21,204,051 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542721,171,900 - 21,204,138 (+)NCBIChiLan1.0ChiLan1.0
EAF2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22119,791,502 - 119,842,980 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13119,796,280 - 119,847,758 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03118,936,685 - 118,996,051 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13125,844,338 - 125,895,416 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3125,844,338 - 125,895,416 (+)Ensemblpanpan1.1panPan2
EAF2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13325,113,348 - 25,147,064 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3325,112,570 - 25,146,692 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3325,138,640 - 25,172,592 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03325,348,708 - 25,382,453 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3325,348,721 - 25,383,535 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13325,147,046 - 25,180,866 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03325,189,107 - 25,223,100 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03325,747,329 - 25,781,040 (+)NCBIUU_Cfam_GSD_1.0
Eaf2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602129,264,251 - 129,308,212 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365368,213,763 - 8,258,201 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365368,213,794 - 8,257,595 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EAF2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13138,648,270 - 138,681,613 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113138,632,541 - 138,681,607 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213148,259,076 - 148,308,649 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EAF2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12258,966,640 - 59,025,158 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2258,974,409 - 59,025,143 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041107,296,606 - 107,348,595 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eaf2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624912112,843 - 168,553 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624912112,793 - 168,553 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Eaf2
2234 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:549
Count of miRNA genes:293
Interacting mature miRNAs:307
Transcripts:ENSMUST00000023537, ENSMUST00000075946, ENSMUST00000114825, ENSMUST00000114829, ENSMUST00000134556, ENSMUST00000138660, ENSMUST00000147053, ENSMUST00000157072
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162879281362792952Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1301841Lrnx9_mlearning-contextual 9 (mouse)Not determined161222536046225471Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
4141179Ipng3_mimprinted postnatal growth 3 (mouse)Not determined2277525257594076Mouse
38501069Tip4_mtuberculosis immunophenotype 4, IFN-g level (mouse)16431786444520363Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16381786464620363Mouse
11049571Lmr12c_mleishmaniasis resistance 12c (mouse)162879281362792952Mouse
1301086Lprm5_mlymphoproliferation modifier 5 (mouse)Not determined161184882445848923Mouse
27226768Tibl9_mtibia length 9, 5 week (mouse)16331786451420363Mouse
11059559Lmr12a_mleishmaniasis resistance 12a (mouse)162879281362792952Mouse
1301443Mopkd2_mmodifier of polycystic kidney disease progression 2 (mouse)Not determined16464631438646414Mouse
10043978Obq35_mobesity QTL 35 (mouse)Not determined16988163143881631Mouse
4142187Arrd3_mage-related retinal degeneration 3 (mouse)Not determined3252290965466552Mouse
1357763Lp1_mlymphocyte proliferation 1 (mouse)Not determined16654297965466552Mouse
1357517Bwtn1_mbody weight at necropsy 1 (mouse)Not determined162001932985600826Mouse
1300943Skts9_mskin tumor susceptibility 9 (mouse)Not determined16577525239775440Mouse
1301070Cypr1_mcytokine production 1 (mouse)Not determined163231279566312933Mouse
1300915Lmr12_mleishmaniasis resistance 12 (mouse)Not determined162879281362792952Mouse
1300656Bgeq15_mbody growth early QTL 15 (mouse)Not determined16577525239775440Mouse
4142236Pstc4_mperiosteal circumference 4 (mouse)Not determined161552290949523112Mouse
1300534Bmd15_mbone mineral density 15 (mouse)Not determined162193838355938574Mouse
11251724Ewc6_methanol withdrawal and consumption 6 (mouse)16822605242226052Mouse
1300987Skull23_mskull morphology 23 (mouse)Not determined16577525239775440Mouse
1301945Skl7_mskeletal size (tail length) 7 (mouse)Not determined16577525239775440Mouse
10045614Rapop6_mradiation-induced apoptosis 6 (mouse)Not determined161480292148803032Mouse
15092062Egrme4_mearly growth rate, maternal effect 4 (mouse)162521866444220250Mouse
27095908Scvln7_msacral vertebrae length 2, 5 week (mouse)16331786439820362Mouse
10412263Gvhd6_mgraft-versus host disease 6 (mouse)Not determined163606085745511148Mouse
27226785Feml12_mfemur length 12, 5 week (mouse)16331786464620363Mouse

Markers in Region
RH130971  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381636,872,476 - 36,872,640UniSTSGRCm38
MGSCv371636,872,562 - 36,872,726UniSTSGRCm37
Celera1637,283,350 - 37,283,514UniSTS
Cytogenetic Map16B3UniSTS
13.MMHAP76FRE7.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12A2UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map12D2UniSTS
Whitehead_YAC12 UniSTS
AV128382  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381636,872,486 - 36,872,612UniSTSGRCm38
MGSCv371636,872,572 - 36,872,698UniSTSGRCm37
Celera1637,283,360 - 37,283,486UniSTS
Cytogenetic Map16B3UniSTS
Whitehead/MRC_RH16357.01UniSTS
AW048865  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381636,800,608 - 36,800,716UniSTSGRCm38
MGSCv371636,800,694 - 36,800,802UniSTSGRCm37
Celera1637,211,044 - 37,211,152UniSTS
Cytogenetic Map16B3UniSTS
Whitehead/MRC_RH16352.58UniSTS
px-16d2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXF2UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map3A2UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001113401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001113405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001358102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_134111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036159730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036159731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003951743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB081298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY034479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY049021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG144504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000023537   ⟹   ENSMUSP00000023537
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1636,614,111 - 36,648,589 (-)Ensembl
GRCm38.p6 Ensembl1636,793,749 - 36,828,227 (-)Ensembl
Ensembl Acc Id: ENSMUST00000075946   ⟹   ENSMUSP00000075331
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1636,613,246 - 36,695,188 (-)Ensembl
GRCm38.p6 Ensembl1636,792,884 - 36,874,826 (-)Ensembl
Ensembl Acc Id: ENSMUST00000114825   ⟹   ENSMUSP00000110473
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1636,613,246 - 36,629,067 (-)Ensembl
GRCm38.p6 Ensembl1636,792,884 - 36,808,705 (-)Ensembl
Ensembl Acc Id: ENSMUST00000114829   ⟹   ENSMUSP00000110477
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1636,614,106 - 36,648,623 (-)Ensembl
GRCm38.p6 Ensembl1636,793,744 - 36,828,261 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134556
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1636,642,925 - 36,695,176 (-)Ensembl
GRCm38.p6 Ensembl1636,822,563 - 36,874,814 (-)Ensembl
Ensembl Acc Id: ENSMUST00000138660
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1636,614,107 - 36,695,365 (-)Ensembl
GRCm38.p6 Ensembl1636,793,745 - 36,875,003 (-)Ensembl
Ensembl Acc Id: ENSMUST00000147053
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1636,614,187 - 36,648,573 (-)Ensembl
GRCm38.p6 Ensembl1636,793,825 - 36,828,211 (-)Ensembl
Ensembl Acc Id: ENSMUST00000157072
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1636,614,106 - 36,695,365 (-)Ensembl
GRCm38.p6 Ensembl1636,793,744 - 36,875,003 (-)Ensembl
Ensembl Acc Id: ENSMUST00000231782
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1636,614,108 - 36,629,067 (-)Ensembl
GRCm38.p6 Ensembl1636,793,746 - 36,808,705 (-)Ensembl
RefSeq Acc Id: NM_001113401   ⟹   NP_001106872
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,613,246 - 36,648,621 (-)NCBI
GRCm381636,792,884 - 36,828,259 (-)NCBI
MGSCv371636,792,970 - 36,874,912 (-)RGD
Celera1637,203,320 - 37,285,700 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001113405   ⟹   NP_001106876
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,613,246 - 36,629,067 (-)NCBI
GRCm381636,792,884 - 36,808,705 (-)NCBI
MGSCv371636,792,970 - 36,874,912 (-)RGD
Celera1637,203,320 - 37,285,700 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001358102   ⟹   NP_001345031
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,613,246 - 36,648,621 (-)NCBI
GRCm381636,792,884 - 36,828,259 (-)NCBI
Sequence:
RefSeq Acc Id: NM_134111   ⟹   NP_598872
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,613,246 - 36,695,188 (-)NCBI
GRCm381636,792,884 - 36,874,826 (-)ENTREZGENE
MGSCv371636,792,970 - 36,874,912 (-)RGD
Celera1637,203,320 - 37,285,700 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006521682   ⟹   XP_006521745
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,614,106 - 36,648,676 (-)NCBI
GRCm381636,793,744 - 36,828,315 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521683   ⟹   XP_006521746
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,614,106 - 36,648,501 (-)NCBI
GRCm381636,793,744 - 36,828,139 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521685   ⟹   XP_006521748
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,614,106 - 36,695,275 (-)NCBI
GRCm381636,793,744 - 36,875,068 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245800   ⟹   XP_011244102
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,620,977 - 36,648,680 (-)NCBI
GRCm381636,800,615 - 36,828,319 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036159730   ⟹   XP_036015623
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,614,106 - 36,695,275 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036159731   ⟹   XP_036015624
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,614,106 - 36,648,672 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003951743
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391636,614,106 - 36,648,680 (-)NCBI
GRCm381636,793,744 - 36,828,319 (-)NCBI
Sequence:
RefSeq Acc Id: NP_598872   ⟸   NM_134111
- Peptide Label: isoform a
- UniProtKB: Q91ZD6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001106872   ⟸   NM_001113401
- Peptide Label: isoform b
- UniProtKB: Q7TN80 (UniProtKB/Swiss-Prot),   Q99KD2 (UniProtKB/Swiss-Prot),   Q91ZD6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001106876   ⟸   NM_001113405
- Peptide Label: isoform a
- UniProtKB: Q91ZD6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006521748   ⟸   XM_006521685
- Peptide Label: isoform X3
- UniProtKB: Q91ZD6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006521745   ⟸   XM_006521682
- Peptide Label: isoform X1
- UniProtKB: K4DI60 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521746   ⟸   XM_006521683
- Peptide Label: isoform X3
- UniProtKB: Q91ZD6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011244102   ⟸   XM_011245800
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: NP_001345031   ⟸   NM_001358102
- Peptide Label: isoform a
Ensembl Acc Id: ENSMUSP00000110477   ⟸   ENSMUST00000114829
Ensembl Acc Id: ENSMUSP00000110473   ⟸   ENSMUST00000114825
Ensembl Acc Id: ENSMUSP00000075331   ⟸   ENSMUST00000075946
Ensembl Acc Id: ENSMUSP00000023537   ⟸   ENSMUST00000023537
RefSeq Acc Id: XP_036015623   ⟸   XM_036159730
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036015624   ⟸   XM_036159731
- Peptide Label: isoform X3
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q91ZD6-F1-model_v2 AlphaFold Q91ZD6 1-262 view protein structure

Promoters
RGD ID:6826989
Promoter ID:MM_KWN:20920
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:NM_001113405
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361636,808,661 - 36,809,161 (-)MPROMDB
RGD ID:6827157
Promoter ID:MM_KWN:20921
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   MEF_B4
Transcripts:ENSMUST00000023537,   ENSMUST00000114817,   ENSMUST00000114819,   NM_177128,   OTTMUST00000059696,   OTTMUST00000060572,   OTTMUST00000060794
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361636,828,354 - 36,828,854 (+)MPROMDB
RGD ID:8686184
Promoter ID:EPDNEW_M21101
Type:multiple initiation site
Name:Eaf2_1
Description:Mus musculus ELL associated factor 2 , transcript variant 1,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381636,874,833 - 36,874,893EPDNEW
RGD ID:6827610
Promoter ID:MM_KWN:20925
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000114812,   NM_134111,   OTTMUST00000060574,   OTTMUST00000060739,   OTTMUST00000060900,   OTTMUST00000060959,   OTTMUST00000061344,   UC007ZCZ.1,   UC007ZDD.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361636,874,836 - 36,875,917 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2146616 AgrOrtholog
Ensembl Genes ENSMUSG00000022838 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000023537 ENTREZGENE
  ENSMUST00000023537.6 UniProtKB/TrEMBL
  ENSMUST00000075946 ENTREZGENE
  ENSMUST00000075946.12 UniProtKB/Swiss-Prot
  ENSMUST00000114825 ENTREZGENE
  ENSMUST00000114825.3 UniProtKB/Swiss-Prot
  ENSMUST00000114829 ENTREZGENE
  ENSMUST00000114829.9 UniProtKB/Swiss-Prot
InterPro EAF_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tscrpt_elong_fac_Eaf_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:106389 UniProtKB/Swiss-Prot
MGD MGI:2146616 ENTREZGENE
NCBI Gene 106389 ENTREZGENE
PANTHER ELL-ASSOCIATED FACTOR 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15970 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EAF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Eaf2 PhenoGen
UniProt EAF2_MOUSE UniProtKB/Swiss-Prot
  K4DI60 ENTREZGENE, UniProtKB/TrEMBL
  Q7TN80 ENTREZGENE
  Q91ZD6 ENTREZGENE
  Q99KD2 ENTREZGENE
UniProt Secondary Q7TN80 UniProtKB/Swiss-Prot
  Q99KD2 UniProtKB/Swiss-Prot