Itgb1 (integrin beta 1 (fibronectin receptor beta)) - Rat Genome Database

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Gene: Itgb1 (integrin beta 1 (fibronectin receptor beta)) Mus musculus
Symbol: Itgb1
Name: integrin beta 1 (fibronectin receptor beta)
RGD ID: 733764
Description: Enables integrin binding activity involved in cell-matrix adhesion. Contributes to laminin binding activity. Involved in several processes, including basement membrane organization; cellular response to low-density lipoprotein particle stimulus; and regulation of synapse pruning. Acts upstream of or within with a negative effect on reactive gliosis and regulation of spontaneous synaptic transmission. Acts upstream of or within several processes, including G1/S transition of mitotic cell cycle; circulatory system development; and neuron projection morphogenesis. Located in several cellular components, including intercalated disc; myelin sheath abaxonal region; and sarcolemma. Part of integrin alpha7-beta1 complex and integrin alpha9-beta1 complex. Is active in Schaffer collateral - CA1 synapse and cerebellar climbing fiber to Purkinje cell synapse. Colocalizes with cytoplasmic vesicle; perinuclear region of cytoplasm; and plasma membrane. Is expressed in several structures, including alimentary system; eye; genitourinary system; heart; and nervous system. Used to study Hirschsprung's disease. Orthologous to human ITGB1 (integrin subunit beta 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4633401G24Rik; AA409975; AA960159; CD29; ENSMUSG00000051907; fibronectin receptor subunit beta; Fn; Fnrb; Gm9863; gpIIa; integrin beta-1; VLA-4 subunit beta
RGD Orthologs
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm18928  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm398129,412,135 - 129,460,060 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8129,412,135 - 129,459,681 (+)EnsemblGRCm39 Ensembl
GRCm388128,685,654 - 128,733,579 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8128,685,654 - 128,733,200 (+)EnsemblGRCm38mm10GRCm38
MGSCv378131,209,554 - 131,257,479 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368131,571,871 - 131,619,287 (+)NCBIMGSCv36mm8
Celera8133,002,434 - 133,050,263 (+)NCBICelera
Cytogenetic Map8E2NCBI
cM Map876.09NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (EXP,ISO)
(20S)-ginsenoside Rh1  (ISO)
(24S)-24-hydroxycholesterol  (ISO)
(25R)-cholest-5-ene-3beta,26-diol  (ISO)
(R)-adrenaline  (ISO)
(S)-nicotine  (ISO)
1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane  (ISO)
1,2-dimethylhydrazine  (EXP)
1,3-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-D  (EXP)
2,4-dinitrotoluene  (ISO)
2,5-hexanedione  (ISO)
2,6-dinitrotoluene  (ISO)
2-deoxy-D-glucose  (ISO)
2-methoxyethanol  (ISO)
2-nitrotoluene  (ISO)
26-hydroxycholesterol  (ISO)
3',5'-cyclic AMP  (ISO)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
5-azacytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
7alpha-hydroxycholesterol  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (EXP,ISO)
all-trans-retinoic acid  (EXP,ISO)
all-trans-retinol  (ISO)
alternariol  (ISO)
Altertoxin II  (ISO)
aluminium oxide  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
Arg-Gly-Asp  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
artesunate  (ISO)
atorvastatin calcium  (ISO)
atrazine  (ISO)
aucubin  (ISO)
beauvericin  (ISO)
benomyl  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-carotene  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
blebbistatin  (ISO)
bromochloroacetic acid  (ISO)
bucladesine  (ISO)
C.I. Natural Red 20  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
calciol  (EXP)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbendazim  (ISO)
carbon nanotube  (EXP)
carmustine  (ISO)
carvone  (EXP,ISO)
CGP 52608  (ISO)
chloroacetaldehyde  (ISO)
chloropicrin  (ISO)
chrysene  (EXP)
cidofovir anhydrous  (ISO)
cisplatin  (ISO)
clotrimazole  (ISO)
cocaine  (EXP)
colforsin daropate hydrochloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP,ISO)
Cuprizon  (ISO)
curcumin  (ISO)
cyclosporin A  (ISO)
D-glucose  (EXP,ISO)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
dibenzo[a,l]pyrene  (ISO)
dibutyl phthalate  (EXP,ISO)
dichlorine  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
disulfiram  (ISO)
diuron  (ISO)
dobutamine  (EXP)
doxorubicin  (ISO)
endosulfan  (ISO)
enniatin  (ISO)
erlotinib hydrochloride  (ISO)
ethanol  (EXP)
ethyl trans-caffeate  (ISO)
etodolac  (ISO)
eugenol  (ISO)
fenamidone  (EXP)
fenhexamid  (ISO)
fenofibrate  (ISO)
folic acid  (EXP,ISO)
fructose  (ISO)
fulvestrant  (ISO)
furan  (ISO)
gefitinib  (ISO)
genistein  (EXP,ISO)
geranylgeraniol  (ISO)
ginsenoside C-K  (ISO)
glucose  (EXP,ISO)
glycidyl methacrylate  (ISO)
glyphosate  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (EXP,ISO)
ifosfamide  (ISO)
indirubin  (ISO)
indometacin  (ISO)
isoprenaline  (EXP,ISO)
ivermectin  (ISO)
latrunculin A  (ISO)
lead diacetate  (EXP)
lipopolysaccharide  (EXP)
lithocholic acid  (ISO)
lovastatin  (EXP)
magnesium atom  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
medroxyprogesterone acetate  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
metformin  (ISO)
methimazole  (ISO)
methotrexate  (EXP,ISO)
methyl methanesulfonate  (ISO)
methylseleninic acid  (EXP)
mevalonic acid  (ISO)
microcystin-LR  (ISO)
ML-7  (ISO)
monocrotaline  (EXP)
morusin  (ISO)
N-acetyl-L-cysteine  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
nicotine  (ISO)
notoginsenoside R1  (EXP)
Octicizer  (ISO)
Ophiopogonin D  (ISO)
ozone  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
pentane-2,3-dione  (ISO)
perfluorohexanesulfonic acid  (ISO)
phenobarbital  (ISO)
phenytoin  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (EXP)
potassium iodide  (ISO)
pravastatin  (ISO)
progesterone  (ISO)
prostaglandin E2  (ISO)
quercetin  (ISO)
quercitrin  (ISO)
raloxifene  (ISO)
resveratrol  (EXP,ISO)
rimonabant  (EXP)
rotenone  (ISO)
ruxolitinib  (ISO)
SB 431542  (ISO)
Shikonin  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
simvastatin  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
Soman  (ISO)
spiromesifen  (ISO)
streptozocin  (EXP,ISO)
sulfadimethoxine  (ISO)
superoxide  (EXP)
T-2 toxin  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
trimellitic anhydride  (EXP)
tunicamycin  (EXP)
valproic acid  (ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vorinostat  (ISO)
Y-27632  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
axon extension  (IGI,IMP)
basement membrane organization  (IMP)
bicellular tight junction assembly  (ISO)
calcium-independent cell-matrix adhesion  (ISO)
cardiac cell fate specification  (IMP)
cardiac muscle cell differentiation  (IMP)
cardiac muscle cell myoblast differentiation  (IMP)
cardiac muscle tissue development  (IMP)
CD40 signaling pathway  (ISO)
cell adhesion  (ISO)
cell adhesion mediated by integrin  (ISO)
cell migration involved in sprouting angiogenesis  (IMP)
cell population proliferation  (IMP)
cell projection organization  (ISO)
cell-cell adhesion mediated by integrin  (ISO)
cell-matrix adhesion  (IGI,IMP,ISO)
cell-substrate adhesion  (ISO)
cellular response to ionizing radiation  (ISO)
cellular response to low-density lipoprotein particle stimulus  (IDA)
cellular response to mechanical stimulus  (ISO)
cellular response to vitamin D  (ISO)
dendrite morphogenesis  (IGI,IMP)
establishment of mitotic spindle orientation  (ISO)
establishment of Sertoli cell barrier  (ISO)
fibroblast migration  (IMP)
formation of radial glial scaffolds  (IMP)
G1/S transition of mitotic cell cycle  (IMP)
germ cell migration  (IMP)
heterotypic cell-cell adhesion  (ISO)
in utero embryonic development  (IMP)
integrin-mediated signaling pathway  (ISO)
lamellipodium assembly  (ISO)
leukocyte cell-cell adhesion  (ISO)
leukocyte tethering or rolling  (ISO)
maintenance of postsynaptic specialization structure  (ISO)
maternal process involved in female pregnancy  (ISO)
mesodermal cell differentiation  (ISO)
modulation of chemical synaptic transmission  (IDA,IMP)
muscle organ development  (IEA)
myoblast fate specification  (IMP)
negative regulation of anoikis  (ISO)
negative regulation of apoptotic process  (ISO)
negative regulation of cell population proliferation  (ISO)
negative regulation of cell projection organization  (ISO)
negative regulation of neuron differentiation  (IMP,ISO)
negative regulation of Rho protein signal transduction  (IGI)
negative regulation of vasoconstriction  (ISO)
neuroblast proliferation  (IMP)
neuron differentiation  (IMP)
neuron projection development  (IMP)
phagocytosis  (ISO)
positive regulation of angiogenesis  (ISO)
positive regulation of apoptotic process  (ISO)
positive regulation of cell migration  (ISO)
positive regulation of cell-substrate adhesion  (ISO)
positive regulation of endocytosis  (ISO)
positive regulation of fibroblast growth factor receptor signaling pathway  (ISO)
positive regulation of fibroblast migration  (ISO)
positive regulation of glutamate uptake involved in transmission of nerve impulse  (IMP)
positive regulation of neuroblast proliferation  (IMP)
positive regulation of neuron differentiation  (ISO)
positive regulation of neuron projection development  (ISO)
positive regulation of peptidyl-tyrosine phosphorylation  (ISO)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (ISO)
positive regulation of protein localization to plasma membrane  (ISO)
positive regulation of vascular endothelial growth factor signaling pathway  (ISO)
positive regulation of wound healing  (ISO)
protein transport within lipid bilayer  (ISO)
reactive gliosis  (IMP)
receptor internalization  (IDA)
regulation of cell cycle  (IMP)
regulation of collagen catabolic process  (ISO)
regulation of G protein-coupled receptor signaling pathway  (ISO)
regulation of postsynaptic neurotransmitter receptor diffusion trapping  (ISO)
regulation of spontaneous synaptic transmission  (IMP)
regulation of synapse pruning  (IDA,IMP)
response to activity  (ISO)
response to gonadotropin  (ISO)
response to nutrient levels  (ISO)
response to transforming growth factor beta  (ISO)
response to xenobiotic stimulus  (ISO)
sarcomere organization  (IMP)
stress fiber assembly  (IMP)
tissue homeostasis  (ISO)
transforming growth factor beta receptor signaling pathway  (IMP)
visual learning  (IGI,IMP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal atrial thrombosis  (IAGP)
abnormal basement membrane morphology  (IAGP)
abnormal Bergmann glial cell morphology  (IAGP)
abnormal blastocoele morphology  (IAGP)
abnormal bone mineralization  (IAGP)
abnormal bone ossification  (IAGP)
abnormal brain morphology  (IAGP)
abnormal Cajal-Retzius cell morphology  (IAGP)
abnormal cardiac cell glucose uptake  (IAGP)
abnormal cardiac mesenchyme morphology  (IAGP)
abnormal cardiac muscle relaxation  (IAGP)
abnormal cardiovascular system physiology  (IAGP)
abnormal cartilage development  (IAGP)
abnormal cell adhesion  (IAGP)
abnormal cell cycle  (IAGP)
abnormal cell death  (IAGP)
abnormal cell morphology  (IAGP)
abnormal cell physiology  (IAGP)
abnormal cellular extravasation  (IAGP)
abnormal cerebellar foliation  (IAGP)
abnormal cerebellum development  (IAGP)
abnormal cerebellum external granule cell layer morphology  (IAGP)
abnormal cerebellum fissure morphology  (IAGP)
abnormal cerebellum lobule morphology  (IAGP)
abnormal cerebellum morphology  (IAGP)
abnormal cerebellum vermis morphology  (IAGP)
abnormal cerebral cortex morphology  (IAGP)
abnormal chondrocyte morphology  (IAGP)
abnormal choroid plexus morphology  (IAGP)
abnormal circulating lipid level  (IAGP)
abnormal CNS glial cell morphology  (IAGP)
abnormal coat/ hair morphology  (IAGP)
abnormal cortical marginal zone morphology  (IAGP)
abnormal cranial nerve morphology  (IAGP)
abnormal craniofacial morphology  (IAGP)
abnormal crypts of Lieberkuhn morphology  (IAGP)
abnormal dendritic cell physiology  (IAGP)
abnormal dermal layer morphology  (IAGP)
abnormal dermal pigmentation  (IAGP)
abnormal digit development  (IAGP)
abnormal ear position  (IAGP)
abnormal ear shape  (IAGP)
abnormal embryo development  (IAGP)
abnormal embryo implantation  (IAGP)
abnormal enteric neural crest cell migration  (IAGP)
abnormal enteric neural crest cell morphology  (IAGP)
abnormal enteric neuron morphology  (IAGP)
abnormal enterocyte morphology  (IAGP)
abnormal epidermal layer morphology  (IAGP)
abnormal epidermal-dermal junction morphology  (IAGP)
abnormal epidermis stratum basale morphology  (IAGP)
abnormal esophageal epithelium morphology  (IAGP)
abnormal eye distance/ position  (IAGP)
abnormal eyelid morphology  (IAGP)
abnormal facial morphology  (IAGP)
abnormal first pharyngeal arch morphology  (IAGP)
abnormal gait  (IAGP)
abnormal glomerular capillary morphology  (IAGP)
abnormal hair follicle development  (IAGP)
abnormal hair follicle morphology  (IAGP)
abnormal hair follicle outer root sheath morphology  (IAGP)
abnormal hair growth  (IAGP)
abnormal head morphology  (IAGP)
abnormal heart morphology  (IAGP)
abnormal heart ventricle morphology  (IAGP)
abnormal inner cell mass morphology  (IAGP)
abnormal innervation  (IAGP)
abnormal innervation pattern to muscle  (IAGP)
abnormal intestinal absorption  (IAGP)
abnormal intestinal epithelium morphology  (IAGP)
abnormal intestine morphology  (IAGP)
abnormal keratinocyte morphology  (IAGP)
abnormal kidney collecting duct morphology  (IAGP)
abnormal kidney cortex morphology  (IAGP)
abnormal kidney medulla morphology  (IAGP)
abnormal kidney morphology  (IAGP)
abnormal large intestine morphology  (IAGP)
abnormal left-right axis patterning  (IAGP)
abnormal lens epithelium morphology  (IAGP)
abnormal lens fiber morphology  (IAGP)
abnormal limb morphology  (IAGP)
abnormal long bone epiphyseal plate morphology  (IAGP)
abnormal long bone hypertrophic chondrocyte zone  (IAGP)
abnormal mammary gland growth during lactation  (IAGP)
abnormal mammary gland morphology  (IAGP)
abnormal meninges morphology  (IAGP)
abnormal mitosis  (IAGP)
abnormal motor coordination/balance  (IAGP)
abnormal myelination  (IAGP)
abnormal myocardial fiber morphology  (IAGP)
abnormal myocardium layer morphology  (IAGP)
abnormal myogenesis  (IAGP)
abnormal myotube morphology  (IAGP)
abnormal nervous system morphology  (IAGP)
abnormal neural tube morphology  (IAGP)
abnormal neuromuscular synapse morphology  (IAGP)
abnormal neuronal migration  (IAGP)
abnormal neuronal precursor cell migration  (IAGP)
abnormal pharyngeal arch morphology  (IAGP)
abnormal placenta labyrinth morphology  (IAGP)
abnormal placenta morphology  (IAGP)
abnormal placental labyrinth vasculature morphology  (IAGP)
abnormal platelet physiology  (IAGP)
abnormal posture  (IAGP)
abnormal radial glial cell morphology  (IAGP)
abnormal renal filtration rate  (IAGP)
abnormal renal glomerular capsule morphology  (IAGP)
abnormal renal glomerulus basement membrane morphology  (IAGP)
abnormal renal glomerulus morphology  (IAGP)
abnormal renal transport  (IAGP)
abnormal renal tubule epithelium morphology  (IAGP)
abnormal rostral migratory stream morphology  (IAGP)
abnormal sciatic nerve morphology  (IAGP)
abnormal skeletal muscle morphology  (IAGP)
abnormal skin condition  (IAGP)
abnormal skin pigmentation  (IAGP)
abnormal small intestine morphology  (IAGP)
abnormal spine curvature  (IAGP)
abnormal trophoblast layer morphology  (IAGP)
abnormal tumor morphology  (IAGP)
abnormal tumor susceptibility  (IAGP)
abnormal urine homeostasis  (IAGP)
abnormal visceral endoderm morphology  (IAGP)
absent blastocoele  (IAGP)
absent inner cell mass  (IAGP)
absent kidney  (IAGP)
absent Schwann cell precursors  (IAGP)
absent sebaceous gland  (IAGP)
aganglionic megacolon  (IAGP)
albuminuria  (IAGP)
alopecia  (IAGP)
anemia  (IAGP)
aphakia  (IAGP)
ataxia  (IAGP)
blistering  (IAGP)
cardiac fibrosis  (IAGP)
chondrodystrophy  (IAGP)
cleft palate  (IAGP)
congestive heart failure  (IAGP)
cyanosis  (IAGP)
decreased body length  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased cell proliferation  (IAGP)
decreased chondrocyte number  (IAGP)
decreased chondrocyte proliferation  (IAGP)
decreased circulating bicarbonate level  (IAGP)
decreased circulating noradrenaline level  (IAGP)
decreased embryo size  (IAGP)
decreased fetal size  (IAGP)
decreased fibroblast cell migration  (IAGP)
decreased fibroblast proliferation  (IAGP)
decreased hair follicle cell proliferation  (IAGP)
decreased hair follicle number  (IAGP)
decreased hematocrit  (IAGP)
decreased hindbrain size  (IAGP)
decreased incidence of tumors by chemical induction  (IAGP)
decreased keratinocyte adhesion  (IAGP)
decreased keratinocyte migration  (IAGP)
decreased keratinocyte proliferation  (IAGP)
decreased kidney weight  (IAGP)
decreased length of long bones  (IAGP)
decreased locomotor activity  (IAGP)
decreased mammary gland tumor incidence  (IAGP)
decreased metastatic potential  (IAGP)
decreased platelet calcium level  (IAGP)
decreased skeletal muscle fiber number  (IAGP)
decreased skeletal muscle mass  (IAGP)
decreased urine osmolality  (IAGP)
decreased ventricle muscle contractility  (IAGP)
delayed somite formation  (IAGP)
delayed wound healing  (IAGP)
dermal-epidermal separation  (IAGP)
dilated cardiomyopathy  (IAGP)
dilated glomerular capillary  (IAGP)
dilated heart  (IAGP)
dilated heart left ventricle  (IAGP)
dilated heart right ventricle  (IAGP)
dilated kidney collecting duct  (IAGP)
dilated renal tubule  (IAGP)
disorganized pancreatic islets  (IAGP)
disproportionate dwarf  (IAGP)
early cellular replicative senescence  (IAGP)
ectopic cerebellar granule cells  (IAGP)
edema  (IAGP)
embryonic growth arrest  (IAGP)
embryonic growth retardation  (IAGP)
embryonic lethality before implantation, complete penetrance  (IAGP)
embryonic lethality between implantation and somite formation, complete penetrance  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
embryonic lethality during organogenesis, incomplete penetrance  (IAGP)
embryonic lethality, complete penetrance  (IAGP)
embryonic lethality, incomplete penetrance  (IAGP)
enlarged hair follicles  (IAGP)
epidermal hyperplasia  (IAGP)
exencephaly  (IAGP)
expanded mesangial matrix  (IAGP)
failure of chorioallantoic fusion  (IAGP)
hemorrhage  (IAGP)
hyperactivity  (IEA)
hypopigmentation  (IAGP)
impaired skin barrier function  (IAGP)
increased apoptosis  (IAGP)
increased blood urea nitrogen level  (IAGP)
increased chondrocyte apoptosis  (IAGP)
increased diameter of long bones  (IAGP)
increased embryonic neuroepithelium thickness  (IAGP)
increased heart atrium size  (IAGP)
increased kidney apoptosis  (IAGP)
increased kidney cell proliferation  (IAGP)
increased mesangial cell number  (IAGP)
increased pancreatic alpha cell number  (IAGP)
increased podocyte apoptosis  (IAGP)
increased response of heart to induced stress  (IAGP)
increased startle reflex  (IEA)
increased susceptibility to induced morbidity/mortality  (IAGP)
increased urine pH  (IAGP)
increased urine protein level  (IAGP)
infertility  (IAGP)
inner cell mass degeneration  (IAGP)
intestine polyps  (IAGP)
isosthenuria  (IAGP)
kidney failure  (IAGP)
kidney medulla cyst  (IAGP)
kidney medulla hypoplasia  (IAGP)
kinked neural tube  (IAGP)
lethality throughout fetal growth and development, complete penetrance  (IAGP)
lethality, complete penetrance  (IAGP)
liver vascular congestion  (IAGP)
mandible hypoplasia  (IAGP)
mesangiolysis  (IAGP)
metabolic acidosis  (IAGP)
micrognathia  (IAGP)
microphthalmia  (IAGP)
muscular atrophy  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
neonatal lethality, incomplete penetrance  (IAGP)
no abnormal phenotype detected  (IAGP)
open neural tube  (IAGP)
pale kidney  (IAGP)
pallor  (IAGP)
perianal ulcer  (IAGP)
pericardial effusion  (IAGP)
perinatal lethality, incomplete penetrance  (IAGP)
pleural effusion  (IAGP)
podocyte foot process effacement  (IAGP)
polyuria  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
premature death  (IAGP)
preweaning lethality, complete penetrance  (IAGP)
preweaning lethality, incomplete penetrance  (IAGP)
progressive hair loss  (IAGP)
progressive muscle weakness  (IAGP)
radial glial endfoot detachment  (IAGP)
reddish skin  (IAGP)
renal cast  (IAGP)
renal hypoplasia  (IAGP)
renal tubular acidosis  (IAGP)
respiratory distress  (IAGP)
short humerus  (IAGP)
short tibia  (IAGP)
single kidney  (IAGP)
skin inflammation  (IAGP)
skin lesions  (IAGP)
small cerebellum  (IAGP)
small first pharyngeal arch  (IAGP)
small kidney  (IAGP)
small olfactory bulb  (IAGP)
small second pharyngeal arch  (IAGP)
sparse hair  (IAGP)
spina bifida  (IAGP)
steatorrhea  (IAGP)
thick epidermis  (IAGP)
thick ventricular wall  (IAGP)
thin epidermis  (IAGP)
thin skin  (IAGP)
tight skin  (IAGP)
wavy neural tube  (IAGP)

References - curated
# Reference Title Reference Citation
1. Connection between integrins and cell activation in rat adrenal glomerulosa cells: a role for Arg-Gly-Asp peptide in the activation of the p42/p44(mapk) pathway and intracellular calcium. Campbell S, etal., Endocrinology. 2003 Apr;144(4):1486-95.
2. Integrin signaling in inflammatory and neuropathic pain in the rat. Dina OA, etal., Eur J Neurosci. 2004 Feb;19(3):634-42.
3. Primary afferent second messenger cascades interact with specific integrin subunits in producing inflammatory hyperalgesia. Dina OA, etal., Pain. 2005 May;115(1-2):191-203.
4. Reelin glycoprotein: structure, biology and roles in health and disease. Fatemi SH Mol Psychiatry. 2005 Mar;10(3):251-7.
5. Bcl-2 and ß1-integrin predict survival in a tissue microarray of small cell lung cancer. Lawson MH, etal., Br J Cancer. 2010 Nov 23;103(11):1710-5. doi: 10.1038/sj.bjc.6605950. Epub 2010 Nov 9.
6. Integrin ß1 Increases Stem Cell Survival and Cardiac Function after Myocardial Infarction. Li L, etal., Front Pharmacol. 2017 Mar 17;8:135. doi: 10.3389/fphar.2017.00135. eCollection 2017.
7. High expression of miR-493-5p positively correlates with clinical prognosis of non small cell lung cancer by targeting oncogene ITGB1. Liang Z, etal., Oncotarget. 2017 Jul 18;8(29):47389-47399. doi: 10.18632/oncotarget.17650.
8. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
9. MGDs mouse GO annotations MGD data from the GO Consortium
11. Intraventricular injection of antibodies to beta1-integrins generates pressure gradients in the brain favoring hydrocephalus development in rats. Nagra G, etal., Am J Physiol Regul Integr Comp Physiol. 2009 Nov;297(5):R1312-21. Epub 2009 Sep 2.
12. Podocyte foot process effacement in very early phase of passive Heymann nephritis is not a prerequisite for proteinuria. Nosaka H, etal., J Nephrol. 2009 Jul-Aug;22(4):484-90.
13. Increased expression of integrin beta1 is a poor prognostic factor in small-cell lung cancer. Oshita F, etal., Anticancer Res. 2002 Mar-Apr;22(2B):1065-70.
14. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
15. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
16. Mouse MP Annotation Import Pipeline RGD automated import pipeline
17. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
18. The integrins. Takada Y, etal., Genome Biol. 2007;8(5):215.
19. Complex patterns of expression suggest extensive roles for the alpha 2 beta 1 integrin in murine development. Wu JE and Santoro SA, Dev Dyn 1994 Apr;199(4):292-314.
20. Zhongguo xiu fu chong jian wai ke za zhi = Zhongguo xiufu chongjian waike zazhi = Chinese journal of reparative and reconstructive surgery Zhong Q, etal., Zhongguo Xiu Fu Chong Jian Wai Ke Za Zhi. 2010 Feb;24(2):133-7.
Additional References at PubMed
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PMID:32803867   PMID:32830538   PMID:32845239   PMID:33051257   PMID:33082319   PMID:33119040   PMID:33159885   PMID:33187358   PMID:33299187   PMID:33359386   PMID:33381120   PMID:33398028  
PMID:33469904   PMID:33472064   PMID:33691117   PMID:33805532   PMID:34029590   PMID:34038147   PMID:34074735   PMID:34133940   PMID:34162999   PMID:34323105   PMID:34336823   PMID:34361001  
PMID:34427057   PMID:34526555   PMID:34721382   PMID:34741805   PMID:34782719   PMID:34908109   PMID:34966794   PMID:34996933   PMID:35132078   PMID:35172155   PMID:35182768   PMID:35212000  
PMID:35340430   PMID:35343899   PMID:35436587   PMID:35444273   PMID:35522553   PMID:35688156   PMID:35734962   PMID:35763345   PMID:35905286   PMID:35908001   PMID:35998584   PMID:36087584  
PMID:36103822   PMID:36125265   PMID:36347239   PMID:36350325   PMID:36430291   PMID:36623578   PMID:36706168   PMID:36861436   PMID:36989113   PMID:37019373   PMID:37185772   PMID:37219464  
PMID:37250402   PMID:37279065   PMID:37449307   PMID:37522872   PMID:37540708   PMID:37678551   PMID:37816355   PMID:38096370   PMID:38139195   PMID:38187761  


Comparative Map Data
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm398129,412,135 - 129,460,060 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8129,412,135 - 129,459,681 (+)EnsemblGRCm39 Ensembl
GRCm388128,685,654 - 128,733,579 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8128,685,654 - 128,733,200 (+)EnsemblGRCm38mm10GRCm38
MGSCv378131,209,554 - 131,257,479 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368131,571,871 - 131,619,287 (+)NCBIMGSCv36mm8
Celera8133,002,434 - 133,050,263 (+)NCBICelera
Cytogenetic Map8E2NCBI
cM Map876.09NCBI
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh381032,900,318 - 32,958,230 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1032,887,273 - 33,005,792 (-)EnsemblGRCh38hg38GRCh38
GRCh371033,189,246 - 33,247,158 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361033,229,326 - 33,287,204 (-)NCBINCBI36Build 36hg18NCBI36
Build 341033,236,244 - 33,264,492NCBI
Celera1032,954,580 - 33,012,639 (-)NCBICelera
Cytogenetic Map10p11.22NCBI
HuRef1032,908,756 - 32,966,834 (-)NCBIHuRef
CHM1_11033,190,855 - 33,248,907 (-)NCBICHM1_1
T2T-CHM13v2.01032,929,042 - 32,986,969 (-)NCBIT2T-CHM13v2.0
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
mRatBN7.21956,705,123 - 56,753,199 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1956,705,171 - 56,753,195 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1963,495,092 - 63,543,090 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01964,355,011 - 64,403,009 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01966,437,682 - 66,485,679 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01961,677,512 - 61,725,537 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1961,677,542 - 61,725,535 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01972,324,582 - 72,372,325 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41958,600,095 - 58,647,531 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11958,605,791 - 58,652,463 (-)NCBI
Celera1956,037,604 - 56,085,651 (+)NCBICelera
Cytogenetic Map19q12NCBI
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
ChiLan1.0 EnsemblNW_0049554624,454,809 - 4,484,842 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554624,454,809 - 4,483,227 (+)NCBIChiLan1.0ChiLan1.0
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
NHGRI_mPanPan11045,549,559 - 45,607,471 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01033,023,573 - 33,081,384 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11033,608,978 - 33,662,258 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1033,608,978 - 33,644,031 (-)Ensemblpanpan1.1panPan2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
CanFam3.123,728,472 - 3,757,696 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl23,670,596 - 3,756,961 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha23,811,003 - 3,857,059 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.024,006,817 - 4,053,107 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl24,006,751 - 4,081,502 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.123,785,306 - 3,831,383 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.023,819,236 - 3,865,356 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.023,939,078 - 3,985,170 (+)NCBIUU_Cfam_GSD_1.0
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
HiC_Itri_2NW_02440934411,966,401 - 11,996,275 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365741,465,897 - 1,495,762 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365741,465,981 - 1,495,717 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
Sscrofa11.1 Ensembl1056,078,396 - 56,173,326 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11056,078,393 - 56,130,608 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21061,450,695 - 61,502,941 (-)NCBISscrofa10.2Sscrofa10.2susScr3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
ChlSab1.1932,201,030 - 32,258,247 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl932,202,204 - 32,258,154 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605641,260,215 - 41,317,418 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
HetGla_female_1.0 EnsemblNW_0046248058,765,949 - 8,802,149 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248058,748,848 - 8,800,259 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1350
Count of miRNA genes:629
Interacting mature miRNAs:763
Transcripts:ENSMUST00000090006, ENSMUST00000124826, ENSMUST00000135281, ENSMUST00000149116
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226796Scvln16_msacral vertebrae length 2, 16 week (mouse)889726628130027694Mouse
1357494Obsty2_mobesity 2 (mouse)Not determined896245241129745061Mouse
12880431Fgf23lq2_mFGF23 serum level QTL 2 (mouse)897626632130127694Mouse
11252141Fdr2_mfat response to dietary restriction 2 (mouse)898390634130127694Mouse
1301481Lith11_mlithogenic gene 11 (mouse)Not determined898563635130127694Mouse
1302105Im1_mImmunoregulatory 1 (mouse)Not determined899828531130127694Mouse
1301080Sluc9_msusceptibility to lung cancer 9 (mouse)Not determined899828531130127694Mouse
4141435Fbtq3_mfemoral bone trait QTL 3 (mouse)Not determined8100965309130127694Mouse
11532691Sluc38_msusceptibility to lung cancer 38 (mouse)8105033977130127694Mouse
11532692Sluc38a_msusceptibility to lung cancer 38a (mouse)8105033977130127694Mouse
14746994Manh65_mmandible shape 65 (mouse)8106489629130127694Mouse
10412273Fcd1_mfunctional capillary density 1 (mouse)Not determined8110415083130127694Mouse
10412274Leci1_mleukocyte endothelial cell interactions 1 (mouse)Not determined8110415083130127694Mouse
12904938Edlmmq7_mextensor digitorum longus muscle mass QTL 7 (mouse)8111481497130127694Mouse
12904960Gmmq6_mgastrocnemius muscle mass QTL 6 (mouse)8111481497130127694Mouse
26884375Skwq2_mskull length QTL 2, 5 week (mouse)8120726739130027694Mouse
1357841Phdlc2_mplasma HDL cholesterol 2 (mouse)Not determined8125191161129745061Mouse

Markers in Region
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388128,732,897 - 128,733,063UniSTSGRCm38
MGSCv378131,256,797 - 131,256,963UniSTSGRCm37
Celera8133,049,576 - 133,049,742UniSTS
Cytogenetic Map8E2UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388128,732,701 - 128,732,845UniSTSGRCm38
MGSCv378131,256,601 - 131,256,745UniSTSGRCm37
Celera8133,049,380 - 133,049,524UniSTS
Cytogenetic Map8E2UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388128,732,183 - 128,732,354UniSTSGRCm38
MGSCv378131,256,083 - 131,256,254UniSTSGRCm37
Celera8133,048,862 - 133,049,033UniSTS
Cytogenetic Map8E2UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv378131,256,812 - 131,257,050UniSTSGRCm37
MGSCv378131,256,884 - 131,257,051UniSTSGRCm37
Celera8133,049,591 - 133,049,829UniSTS
Celera8133,049,663 - 133,049,830UniSTS
Cytogenetic Map8E2UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388128,732,912 - 128,733,150UniSTSGRCm38
MGSCv378131,256,812 - 131,257,050UniSTSGRCm37
Celera8133,049,591 - 133,049,829UniSTS
Cytogenetic Map8E2UniSTS
cM Map8 UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388128,732,984 - 128,733,151UniSTSGRCm38
MGSCv378131,256,884 - 131,257,051UniSTSGRCm37
Celera8133,049,663 - 133,049,830UniSTS
Cytogenetic Map8E2UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8E2UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8E2UniSTS



Nucleotide Sequences
RefSeq Transcripts NM_010578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC156608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC119428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U37029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U47283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X15202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y00769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000090006   ⟹   ENSMUSP00000087457
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8129,412,135 - 129,459,681 (+)Ensembl
GRCm38.p6 Ensembl8128,685,654 - 128,733,200 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124826   ⟹   ENSMUSP00000120026
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8129,412,238 - 129,459,098 (+)Ensembl
GRCm38.p6 Ensembl8128,685,757 - 128,732,617 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135281
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8129,412,351 - 129,437,141 (+)Ensembl
GRCm38.p6 Ensembl8128,685,870 - 128,710,660 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149116   ⟹   ENSMUSP00000119699
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8129,450,814 - 129,458,870 (+)Ensembl
GRCm38.p6 Ensembl8128,724,333 - 128,732,389 (+)Ensembl
RefSeq Acc Id: NM_010578   ⟹   NP_034708
RefSeq Status: VALIDATED
Mouse AssemblyChrPosition (strand)Source
GRCm398129,412,135 - 129,460,060 (+)NCBI
GRCm388128,685,654 - 128,733,579 (+)NCBI
MGSCv378131,209,554 - 131,257,479 (+)RGD
Celera8133,002,434 - 133,050,263 (+)RGD
RefSeq Acc Id: NP_034708   ⟸   NM_010578
- Peptide Label: precursor
- UniProtKB: Q8BTU0 (UniProtKB/Swiss-Prot),   Q61126 (UniProtKB/Swiss-Prot),   Q60993 (UniProtKB/Swiss-Prot),   Q3TWH6 (UniProtKB/Swiss-Prot),   Q3TIW5 (UniProtKB/Swiss-Prot),   F6R105 (UniProtKB/Swiss-Prot),   Q8BVU1 (UniProtKB/Swiss-Prot),   P09055 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000087457   ⟸   ENSMUST00000090006
RefSeq Acc Id: ENSMUSP00000120026   ⟸   ENSMUST00000124826
RefSeq Acc Id: ENSMUSP00000119699   ⟸   ENSMUST00000149116
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P09055-F1-model_v2 AlphaFold P09055 1-798 view protein structure

RGD ID:8668702
Promoter ID:EPDNEW_M12382
Type:initiation region
Description:Mus musculus integrin beta 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database,
Experiment Methods:Single-end sequencing.
Mouse AssemblyChrPosition (strand)Source
GRCm388128,685,776 - 128,685,836EPDNEW
RGD ID:6843342
Promoter ID:MM_KWN:56251
SO ACC ID:SO:0000170
Tissues & Cell Lines:3T3L1_Day0,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Liver,   Spleen
Transcripts:ENSMUST00000004192,   NM_010578,   OTTMUST00000085928,   UC009NZW.1
Mouse AssemblyChrPosition (strand)Source
MGSCv368131,208,771 - 131,209,802 (+)MPROMDB
RGD ID:6843076
Promoter ID:MM_KWN:56250
SO ACC ID:SO:0000170
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day6,   Brain,   Kidney,   Lung,   MEF_B4
Mouse AssemblyChrPosition (strand)Source
MGSCv368131,209,421 - 131,210,277 (-)MPROMDB
RGD ID:6843345
Promoter ID:MM_KWN:56252
SO ACC ID:SO:0000170
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney
Mouse AssemblyChrPosition (strand)Source
MGSCv368131,247,669 - 131,248,169 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96610 AgrOrtholog
Ensembl Genes ENSMUSG00000025809 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000090006 ENTREZGENE
  ENSMUST00000090006.12 UniProtKB/Swiss-Prot
  ENSMUST00000124826.2 UniProtKB/TrEMBL
  ENSMUST00000149116.2 UniProtKB/TrEMBL
Gene3D-CATH UniProtKB/Swiss-Prot
  4.10.1240.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cytochrome c1, transmembrane anchor, C-terminal UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Laminin UniProtKB/Swiss-Prot
  ligand-binding face of the semaphorins, domain 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ntegrin, alpha v. Chain A, domain 3 UniProtKB/Swiss-Prot
InterPro EGF_extracell UniProtKB/Swiss-Prot
  I-EGF_1 UniProtKB/Swiss-Prot
  Integrin_beta_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Integrin_bsu UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Integrin_bsu_cyt_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Integrin_bsu_tail UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Integrin_bsu_tail_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Integrin_bsu_VWA UniProtKB/Swiss-Prot
  Integrin_dom_sf UniProtKB/Swiss-Prot
  PSI UniProtKB/Swiss-Prot
  vWFA_dom_sf UniProtKB/Swiss-Prot
PANTHER PTHR10082 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10082:SF28 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EGF_2 UniProtKB/Swiss-Prot
  I-EGF_1 UniProtKB/Swiss-Prot
  Integrin_b_cyt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Integrin_B_tail UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Integrin_beta UniProtKB/Swiss-Prot
  PSI_integrin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Itgb1 PhenoGen
PIRSF Integrin_B UniProtKB/Swiss-Prot
PROSITE EGF_1 UniProtKB/Swiss-Prot
  INTEGRIN_BETA UniProtKB/Swiss-Prot
SMART INB UniProtKB/Swiss-Prot
  Integrin_b_cyt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Integrin_B_tail UniProtKB/Swiss-Prot
  PSI UniProtKB/Swiss-Prot
Superfamily-SCOP EGF/Laminin UniProtKB/Swiss-Prot
  Plexin repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF53300 UniProtKB/Swiss-Prot
  SSF69179 UniProtKB/Swiss-Prot
  SSF69687 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt Secondary F6R105 UniProtKB/Swiss-Prot
  Q3TIW5 UniProtKB/Swiss-Prot
  Q3TWH6 UniProtKB/Swiss-Prot
  Q60993 UniProtKB/Swiss-Prot
  Q61126 UniProtKB/Swiss-Prot
  Q8BTU0 UniProtKB/Swiss-Prot
  Q8BVU1 UniProtKB/Swiss-Prot