Gyg1 (glycogenin 1) - Rat Genome Database

Name: Gyg1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: Gyg1 (glycogenin 1) Mus musculus

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Symbol:

Gyg1

Name:

glycogenin 1

RGD ID:

733753

MGI Page

MGI

Description:

Enables glycogenin glucosyltransferase activity. Involved in glycogen biosynthetic process. Predicted to be active in cytoplasm. Is expressed in several structures, including cardiovascular system; genitourinary system; gut; nervous system; and respiratory system. Used to study glycogen storage disease XV. Human ortholog(s) of this gene implicated in glycogen storage disease and glycogen storage disease XV. Orthologous to human GYG1 (glycogenin 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AU017667; glycogenin; glycogenin-1; GN-1; GN1; Gyg

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GYG1 (glycogenin 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Gyg1 (glycogenin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Gyg1 (glycogenin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GYG1 (glycogenin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GYG1 (glycogenin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Gyg1 (glycogenin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GYG1 (glycogenin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GYG1 (glycogenin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Gyg1 (glycogenin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Gyg1 (glycogenin 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	GYG1 (glycogenin 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	gyg1b (glycogenin 1b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Danio rerio (zebrafish):	gyg1a (glycogenin 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Saccharomyces cerevisiae (baker's yeast):	GLG1	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Gyg	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	gyg-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	gyg-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	GLG2	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	gyg1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	vax2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	20,176,248 - 20,209,228 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	20,176,248 - 20,209,481 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	20,122,083 - 20,155,117 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	20,122,084 - 20,155,317 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	20,021,970 - 20,054,995 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	20,314,121 - 20,347,088 (-)	NCBI		MGSCv36	mm8
Celera	3	20,111,292 - 20,144,314 (-)	NCBI		Celera
Cytogenetic Map	3	A2	NCBI
cM Map	3	6.19	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

aceruloplasminemia (ISO)

Cardiac Arrhythmias (ISO)

genetic disease (ISO)

glycogen storage disease (ISO)

glycogen storage disease XV (IAGP,ISO)

Muscle Weakness (ISO)

Myocardial Ischemia (ISO)

Polyglucosan Body Myopathy 2 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dimethylhydrazine (EXP)

1-chloro-2,4-dinitrobenzene (ISO)

1H-pyrazole (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3',4,4',5-Pentachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-tribromophenol (ISO)

2,6-dinitrotoluene (ISO)

2-methylcholine (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

acrylamide (ISO)

actinomycin D (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (ISO)

amphetamine (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (EXP,ISO)

Benzo[ghi]perylene (EXP)

bisphenol A (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

carbon nanotube (EXP)

CGP 52608 (ISO)

chloroprene (EXP)

choline (EXP)

cocaine (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (EXP)

cyclosporin A (EXP,ISO)

dexamethasone (ISO)

dibutyl phthalate (EXP)

diuron (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

fipronil (ISO)

folic acid (EXP)

genistein (EXP)

indometacin (ISO)

ivermectin (ISO)

L-methionine (EXP)

Mesaconitine (ISO)

N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal (EXP)

N-methyl-4-phenylpyridinium (ISO)

N-nitrosodiethylamine (ISO)

Nutlin-3 (ISO)

ozone (EXP,ISO)

paracetamol (ISO)

perfluorohexanesulfonic acid (EXP)

perfluorooctane-1-sulfonic acid (EXP)

phenethyl caffeate (ISO)

phenobarbital (EXP,ISO)

phenylmercury acetate (ISO)

pirinixic acid (EXP)

pregnenolone 16alpha-carbonitrile (ISO)

progesterone (ISO)

raloxifene (ISO)

rotenone (ISO)

SB 431542 (ISO)

sodium arsenite (EXP)

Soman (ISO)

sunitinib (ISO)

tamoxifen (ISO)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

topiramate (ISO)

triclosan (ISO)

trimellitic anhydride (EXP)

triphenyl phosphate (ISO)

triptonide (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

glycogen biosynthetic process (IBA,IMP,ISO,ISS)

Cellular Component

cytoplasm (IBA,ISS)

Molecular Function

D-glucose binding (ISO)

glycogenin glucosyltransferase activity (IMP,ISO)

glycosyltransferase activity (IBA)

manganese ion binding (ISO)

metal ion binding (IEA)

obsolete UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity (ISO)

protein binding (ISO)

protein homodimerization activity (ISO,ISS)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

glycogen biosynthetic pathway (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal cellular respiration (IAGP)

abnormal glucose homeostasis (IAGP)

abnormal glycogen homeostasis (IAGP)

abnormal lipid oxidation (IAGP)

abnormal lung morphology (IAGP)

abnormal muscle electrophysiology (IAGP)

abnormal response to exercise (IAGP)

abnormal type II pneumocyte morphology (IAGP)

atelectasis (IAGP)

congestive heart failure (IAGP)

decreased aerobic running capacity (IAGP)

decreased carbon dioxide production (IAGP)

decreased energy expenditure (IAGP)

decreased lung glycogen level (IAGP)

decreased oxygen consumption (IAGP)

impaired exercise endurance (IAGP)

increased cardiac muscle glycogen level (IAGP)

increased grip strength (IEA)

increased skeletal muscle glycogen level (IAGP)

neonatal lethality, incomplete penetrance (IAGP)

preweaning lethality, complete penetrance (IEA)

respiratory distress (IAGP)

respiratory failure (IAGP)

small alveolar lamellar bodies (IAGP)

thick pulmonary interalveolar septum (IAGP)

thick ventricular wall (IEA)

unresponsive to tactile stimuli (IEA)

vertebral fusion (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	No limiting role for glycogenin in determining maximal attainable glycogen levels in rat skeletal muscle.	Hansen BF, etal., Am J Physiol Endocrinol Metab. 2000 Mar;278(3):E398-404.
2.	Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.	Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3.	Glycogen synthesis in the astrocyte: from glycogenin to proglycogen to glycogen.	Lomako J, etal., FASEB J. 1993 Nov;7(14):1386-93.
4.	MGDs mouse GO annotations	MGD data from the GO Consortium
5.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
6.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:9396856	PMID:10349636	PMID:10542328	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11707070	PMID:12122015	PMID:12466851	PMID:12477932
PMID:14681479	PMID:15489334	PMID:15782199	PMID:16141072	PMID:16141073	PMID:16533952	PMID:16602821	PMID:18782850	PMID:19884348	PMID:21267068	PMID:21677750	PMID:21873635
PMID:23260145	PMID:23300479	PMID:24154525	PMID:24194600	PMID:24982189	PMID:26278983	PMID:27542691	PMID:27626380	PMID:28683291	PMID:29669786	PMID:31693883	PMID:31917811
PMID:32325033	PMID:32798765	PMID:33219378	PMID:35893676	PMID:38355793

Genomics

Comparative Map Data

Gyg1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	20,176,248 - 20,209,228 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	20,176,248 - 20,209,481 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	20,122,083 - 20,155,117 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	20,122,084 - 20,155,317 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	20,021,970 - 20,054,995 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	20,314,121 - 20,347,088 (-)	NCBI		MGSCv36	mm8
Celera	3	20,111,292 - 20,144,314 (-)	NCBI		Celera
Cytogenetic Map	3	A2	NCBI
cM Map	3	6.19	NCBI

GYG1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	148,991,540 - 149,031,775 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	148,991,408 - 149,031,775 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	148,709,327 - 148,749,562 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	150,192,065 - 150,228,109 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	150,192,072 - 150,228,117	NCBI
Celera	3	147,119,449 - 147,155,731 (+)	NCBI		Celera
Cytogenetic Map	3	q24	NCBI
HuRef	3	146,081,276 - 146,117,422 (+)	NCBI		HuRef
CHM1_1	3	148,671,929 - 148,708,500 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	151,742,259 - 151,782,489 (+)	NCBI		T2T-CHM13v2.0

Gyg1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	104,540,927 - 104,583,038 (-)	NCBI		GRCr8
mRatBN7.2	2	102,611,888 - 102,653,916 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	102,598,496 - 102,653,797 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	109,125,020 - 109,166,823 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	107,246,179 - 107,287,982 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	102,210,530 - 102,253,266 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	104,916,734 - 104,958,219 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	104,916,738 - 104,958,034 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	124,636,895 - 124,678,274 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	105,264,657 - 105,307,070 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	105,209,619 - 105,249,895 (-)	NCBI
Celera	2	97,981,791 - 98,022,289 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

Gyg1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955474	8,491,100 - 8,523,925 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955474	8,491,100 - 8,523,280 (-)	NCBI	ChiLan1.0	ChiLan1.0

GYG1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	146,887,122 - 146,923,434 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	146,891,907 - 146,928,164 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	146,015,629 - 146,055,412 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	153,596,575 - 153,629,865 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	153,595,624 - 153,632,740 (+)	Ensembl	panpan1.1		panPan2

GYG1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	43,831,942 - 43,864,135 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	43,826,216 - 43,864,019 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	43,695,692 - 43,729,522 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	44,459,357 - 44,493,432 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	44,459,767 - 44,493,430 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	44,047,650 - 44,081,705 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	44,096,140 - 44,130,163 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	44,350,195 - 44,384,262 (+)	NCBI		UU_Cfam_GSD_1.0

Gyg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	83,120,550 - 83,151,704 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936519	6,582,286 - 6,613,630 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936519	6,582,286 - 6,613,440 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GYG1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	89,221,157 - 89,259,792 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	89,221,086 - 89,259,569 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	97,219,130 - 97,253,063 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GYG1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	41,678,619 - 41,715,311 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	41,679,319 - 41,715,251 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	14,520,986 - 14,558,247 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gyg1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	26,218,154 - 26,253,084 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	26,218,611 - 26,253,085 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Gyg1
1349 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	443
Count of miRNA genes:	159
Interacting mature miRNAs:	162
Transcripts:	ENSMUST00000118015, ENSMUST00000135475, ENSMUST00000178328, ENSMUST00000184552
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142399	Aec1_m	autoimmune exocrinopathy 1 (mouse)			Not determined			7586174	102690034	Mouse
4141116	Lgaq4_m	late growth adjusted QTL 4 (mouse)			Not determined			10249221	83184946	Mouse
1357584	Splq6_m	spleen weight QTL 6 (mouse)			Not determined		3	10249221	83184946	Mouse
4141563	Lgq3_m	late growth QTL 3 (mouse)			Not determined			10249221	83184946	Mouse
12738410	Lfibq2_m	liver fibrosis QTL 2 (mouse)					3	12065060	20755242	Mouse
1301114	Ssial2_m	susceptibility to sialadenitis 2 (mouse)			Not determined		3	20174862	54180103	Mouse
26884436	Zlq3_m	zygomatic length QTL 3, 10 week (mouse)					3	3265060	142405761	Mouse
12798540	Scvg2_m	subcutaneous vessel growth QTL 2 (mouse)					3	7449815	26249645	Mouse
25671383	Hrsq1_m	host response to SARS QTL 1, vascular cuffing (mouse)					3	18440954	26823641	Mouse
26884427	Cvht4_m	cranial vault height 4, 10 week (mouse)					3	16054164	109707316	Mouse
4142092	Tgq13_m	triglyceride QTL 13 (mouse)			Not determined			18288168	52288168	Mouse
1357440	Hrtpq1_m	heart weight percentage QTL 1 (mouse)			Not determined		3	10249221	83184946	Mouse
4141255	W10q3_m	weight 10 weeks QTL 3 (mouse)			Not determined			10249221	83184946	Mouse
1558925	Hivan1_m	HIV-associated nephropathy 1 (mouse)			Not determined		3	7586174	68716946	Mouse
1301256	Skmw1_m	skeletal muscle weight 1 (mouse)			Not determined		3	1	25786432	Mouse
39128206	Lwq18_m	liver weight QTL 18 (mouse)					3	10249221	83184946	Mouse
13207570	Tcq12_m	total cholesterol QTL 12 (mouse)					3	16504164	130163649	Mouse
1300559	Thypr3_m	thymocyte proliferative response 3 (mouse)			Not determined		3	4525419	38525519	Mouse
1301358	Eae20_m	experimental allergic encephalomyelitis 20 (mouse)			Not determined		3	11630453	45630591	Mouse

Markers in Region

AU017667

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	20,122,198 - 20,122,287	UniSTS	GRCm38
MGSCv37	3	20,022,084 - 20,022,173	UniSTS	GRCm37
Celera	3	20,111,406 - 20,111,495	UniSTS
Cytogenetic Map	3	A2	UniSTS
cM Map	3	12.5	UniSTS
Whitehead/MRC_RH	3	222.33	UniSTS

GYG1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	20,150,955 - 20,151,071	UniSTS	GRCm38
MGSCv37	3	20,050,841 - 20,050,957	UniSTS	GRCm37
Celera	3	20,140,173 - 20,140,289	UniSTS
Cytogenetic Map	3	A2	UniSTS
cM Map	3	12.5	UniSTS

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001355261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001411172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001411173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001411174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001411175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001411176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_013755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	A33116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AA553085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC073883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC158937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF114031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF114032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK186715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK189594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK190314	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK194611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK194923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK195541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK201075	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK201125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK202350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK205608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK207016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK207366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK207607	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK208307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK208954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK209105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK209409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK210083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK210151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK210267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK212191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK214082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK214349	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK217401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK218671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK219852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK219866	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC029903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ174550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000118015 ⟹ ENSMUSP00000114019

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	20,176,248 - 20,209,481 (-)	Ensembl
GRCm38.p6 Ensembl	3	20,122,084 - 20,155,317 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000135475

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	20,176,720 - 20,177,707 (-)	Ensembl
GRCm38.p6 Ensembl	3	20,122,556 - 20,123,543 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000178328 ⟹ ENSMUSP00000136035

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	20,176,251 - 20,209,260 (-)	Ensembl
GRCm38.p6 Ensembl	3	20,122,087 - 20,155,096 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000184552 ⟹ ENSMUSP00000138949

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	20,176,311 - 20,209,233 (-)	Ensembl
GRCm38.p6 Ensembl	3	20,122,147 - 20,155,069 (-)	Ensembl

RefSeq Acc Id:

NM_001355261 ⟹ NP_001342190

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	20,176,248 - 20,209,228 (-)	NCBI
GRCm38	3	20,122,084 - 20,155,116 (-)	NCBI

Sequence:

show sequence

TGCGCGGCCACGTGACGGCCGCTATAAGAGCGGCGGGCTGCGGACTCCCGCCCTCCCTGCTGGC
CGCGGTCACCTACCGGCGCCCGGCTCCTCCGACCCACCCGGCCACACTATGACAGATCAGGCTT
TTGTGACGCTGACCACAAACGATGCCTATGCCAAAGGTGCGCTGGTCCTGGGCTCATCTTTGAA
ACAGCACAGGACTACTAGGAGGATGGTTGTACTCACCAGCCCACAGGTTTCAGACTCCATGAGA
AAAGTTTTAGAGACTGTCTTTGATGACGTCATCATGGTAGATGTCTTGGACAGTGGTGATTCTG
CTCATCTAACCTTAATGAAGAGACCTGAGTTGGGCATCACATTGACTAAACTCCACTGCTGGTC
ACTTACTCAGTATTCCAAATGTGTGTTCATGGATGCAGATACTCTGGTCCTCTCAAATATTGAT
GATCTGTTTGAAAGAGAAGAATTATCAGCAGCACCAGACCCAGGGTGGCCTGACTGTTTCAATT
CTGGAGTCTTTGTCTATCAACCCTCCATTGAAACGTATAACCAGCTGTTGCATCTGGCTTCTGA
GCAAGGTAGTTTTGATGGTGGGGACCAGGGCCTACTGAATACATATTTTAGTGGCTGGGCAACG
ACAGATATCACAAAACACCTGCCATTTGTGTATAACCTAAGCAGCATTTCAATATACTCCTACC
TCCCGGCATTTAAAGCGTTTGGTAAAAATGCCAAAGTTGTGCACTTCCTGGGACGAACCAAGCC
ATGGAATTACACTTATAACCCCCAAACAAAAAGTGTCAACTGTGACTCCCAGGACCCAACCGTG
AGTCACCCAGAGTTTCTGAACCTGTGGTGGGACACCTTCACCACCAACGTCTTACCCCTGCTCC
AACACCATGGCCTTGTCAAAGATGCCAGCTCCTATCTAATGATGCTTTCAGACTTGGTCTATAC
ACTGGCTTTCTCTTGTGGCTTCTGTAGAAAGGAACATGTCTCAGGAGCCTTGTCAGACCTGTCC
TTTGGGGAGGCCCCAGCTGCACCACAACCTTCTATGTCCTCAGAAGAAAGGAAGGAACGGTGGG
AACAGGGCCAGGCCGATTACATGGGAGCAGATTCTTTTGATAACATCAAGAGAAAACTTGACAC
TTACCTGCAATAGAAGCACTGCCATTTTCCTGTGGACACACCCATGTCTTAGGCACGTTTCCAT
ACATAGTATGTGAAGTCTGTTACAGTTGTTAGAGGCTTTCACTAAACCTCATCAGATGAGGGGT
TTGGGCAGGACAACAGGTGAGAACTGGGCAAATGTTATTAGGTCGTAATTCCATCATGTGGACA
AGTGTTCTGTTTAACCCTAGACTTTTTTTTTTTAATTCTCAATTCTTAAATTGCCAATGTGTGA
TAAAAGAAAGCCAACATTAAGCTACTAAGATGGCTCTCTCAAGTGGTGCATAACTTGACTCTCC
ATCTTCAAAACAAGGTGTGACATTTTCCAATCTTCACTTGTTGCATCCTTCACAAGACCTGCAA
TGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACAC
TGCGGAGTGATTCCTAAGCCTACCAGCTAGTGTTAGTTCACCAGTTTTCTATGCACCGTGAAGG
CAGCATGCAGACTTGTTCTTTCTCAGTTGTCTACTTGAAAATTGCAGTGTGCTCTCTGATGGTA
GCTGTGGTAGCACTGTGTATAACAAATAAACACTTATTGACATA

hide sequence

RefSeq Acc Id:

NM_001411172 ⟹ NP_001398101

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	20,176,248 - 20,209,228 (-)	NCBI

RefSeq Acc Id:

NM_001411173 ⟹ NP_001398102

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	20,176,248 - 20,209,228 (-)	NCBI

RefSeq Acc Id:

NM_001411174 ⟹ NP_001398103

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	20,176,248 - 20,209,228 (-)	NCBI

RefSeq Acc Id:

NM_001411175 ⟹ NP_001398104

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	20,176,248 - 20,209,228 (-)	NCBI

RefSeq Acc Id:

NM_001411176 ⟹ NP_001398105

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	20,176,248 - 20,209,228 (-)	NCBI

RefSeq Acc Id:

NM_013755 ⟹ NP_038783

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	20,176,248 - 20,209,228 (-)	NCBI
GRCm38	3	20,122,083 - 20,155,116 (-)	NCBI
MGSCv37	3	20,021,970 - 20,054,995 (-)	RGD
Celera	3	20,111,292 - 20,144,334 (-)	NCBI
cM Map	3		ENTREZGENE

Sequence:

show sequence

TGCGCGGCCACGTGACGGCCGCTATAAGAGCGGCGGGCTGCGGACTCCCGCCCTCCCTGCTGGC
CGCGGTCACCTACCGGCGCCCGGCTCCTCCGACCCACCCGGCCACACTATGACAGATCAGGCTT
TTGTGACGCTGACCACAAACGATGCCTATGCCAAAGGTGCGCTGGTCCTGGGCTCATCTTTGAA
ACAGCACAGGACTACTAGGAGGATGGTTGTACTCACCAGCCCACAGGTTTCAGACTCCATGAGA
AAAGTTTTAGAGACTGTCTTTGATGACGTCATCATGGTAGATGTCTTGGACAGTGGTGATTCTG
CTCATCTAACCTTAATGAAGAGACCTGAGTTGGGCATCACATTGACTAAACTCCACTGCTGGTC
ACTTACTCAGTATTCCAAATGTGTGTTCATGGATGCAGATACTCTGGTCCTCTCAAATATTGAT
GATCTGTTTGAAAGAGAAGAATTATCAGCAGCACCAGACCCAGGGTGGCCTGACTGTTTCAATT
CTGGAGTCTTTGTCTATCAACCCTCCATTGAAACGTATAACCAGCTGTTGCATCTGGCTTCTGA
GCAAGGTAGTTTTGATGGTGGGGACCAGGGCCTACTGAATACATATTTTAGTGGCTGGGCAACG
ACAGATATCACAAAACACCTGCCATTTGTGTATAACCTAAGCAGCATTTCAATATACTCCTACC
TCCCGGCATTTAAAGCGTTTGGTAAAAATGCCAAAGTTGTGCACTTCCTGGGACGAACCAAGCC
ATGGAATTACACTTATAACCCCCAAACAAAAAGTGTCAACTGTGACTCCCAGGACCCAACCGTG
AGTCACCCAGAGTTTCTGAACCTGTGGTGGGACACCTTCACCACCAACGTCTTACCCCTGCTCC
AACACCATGGCCTTGTCAAAGATGCCAGCTCCTATCTAATGATGGAACATGTCTCAGGAGCCTT
GTCAGACCTGTCCTTTGGGGAGGCCCCAGCTGCACCACAACCTTCTATGTCCTCAGAAGAAAGG
AAGGAACGGTGGGAACAGGGCCAGGCCGATTACATGGGAGCAGATTCTTTTGATAACATCAAGA
GAAAACTTGACACTTACCTGCAATAGAAGCACTGCCATTTTCCTGTGGACACACCCATGTCTTA
GGCACGTTTCCATACATAGTATGTGAAGTCTGTTACAGTTGTTAGAGGCTTTCACTAAACCTCA
TCAGATGAGGGGTTTGGGCAGGACAACAGGTGAGAACTGGGCAAATGTTATTAGGTCGTAATTC
CATCATGTGGACAAGTGTTCTGTTTAACCCTAGACTTTTTTTTTTTAATTCTCAATTCTTAAAT
TGCCAATGTGTGATAAAAGAAAGCCAACATTAAGCTACTAAGATGGCTCTCTCAAGTGGTGCAT
AACTTGACTCTCCATCTTCAAAACAAGGTGTGACATTTTCCAATCTTCACTTGTTGCATCCTTC
ACAAGACCTGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGG
CCTTTATTAACACTGCGGAGTGATTCCTAAGCCTACCAGCTAGTGTTAGTTCACCAGTTTTCTA
TGCACCGTGAAGGCAGCATGCAGACTTGTTCTTTCTCAGTTGTCTACTTGAAAATTGCAGTGTG
CTCTCTGATGGTAGCTGTGGTAGCACTGTGTATAACAAATAAACACTTATTGACATAT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001342190	(Get FASTA)	NCBI Sequence Viewer
	NP_001398101	(Get FASTA)	NCBI Sequence Viewer
	NP_001398102	(Get FASTA)	NCBI Sequence Viewer
	NP_001398103	(Get FASTA)	NCBI Sequence Viewer
	NP_001398104	(Get FASTA)	NCBI Sequence Viewer
	NP_001398105	(Get FASTA)	NCBI Sequence Viewer
	NP_038783	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD48901	(Get FASTA)	NCBI Sequence Viewer
	AAD48902	(Get FASTA)	NCBI Sequence Viewer
	AAH29903	(Get FASTA)	NCBI Sequence Viewer
	BAE35197	(Get FASTA)	NCBI Sequence Viewer
	CAA02130	(Get FASTA)	NCBI Sequence Viewer
	EDL34894	(Get FASTA)	NCBI Sequence Viewer
	EDL34895	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000114019.3
	ENSMUSP00000136035
	ENSMUSP00000136035.2
	ENSMUSP00000138949
	ENSMUSP00000138949.2
GenBank Protein	Q9R062	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_038783 ⟸ NM_013755
- Peptide Label:	isoform 2
- UniProtKB:	Q3TWR9 (UniProtKB/Swiss-Prot), Q9R062 (UniProtKB/Swiss-Prot), V9GX26 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRMVVLTSPQVSDSMRKVLETVFDDVIMVDVL DSGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAAPDPGW PDCFNSGVFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDITKHLPFVYNLSSI SIYSYLPAFKAFGKNAKVVHFLGRTKPWNYTYNPQTKSVNCDSQDPTVSHPEFLNLWWDTFTTN VLPLLQHHGLVKDASSYLMMEHVSGALSDLSFGEAPAAPQPSMSSEERKERWEQGQADYMGADS FDNIKRKLDTYLQ hide sequence

RefSeq Acc Id:	NP_001342190 ⟸ NM_001355261
- Peptide Label:	isoform 1
- UniProtKB:	V9GX26 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSMUSP00000138949 ⟸ ENSMUST00000184552

Ensembl Acc Id:

ENSMUSP00000136035 ⟸ ENSMUST00000178328

Ensembl Acc Id:

ENSMUSP00000114019 ⟸ ENSMUST00000118015

RefSeq Acc Id:	NP_001398105 ⟸ NM_001411176
- Peptide Label:	isoform 7

RefSeq Acc Id:	NP_001398103 ⟸ NM_001411174
- Peptide Label:	isoform 5
- UniProtKB:	V9GX26 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001398102 ⟸ NM_001411173
- Peptide Label:	isoform 4
- UniProtKB:	V9GX26 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001398104 ⟸ NM_001411175
- Peptide Label:	isoform 6

RefSeq Acc Id:	NP_001398101 ⟸ NM_001411172
- Peptide Label:	isoform 3
- UniProtKB:	V9GX26 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9R062-F1-model_v2	AlphaFold	Q9R062	1-333	view protein structure

Promoters

RGD ID:

6833934

Promoter ID:

MM_KWN:33864

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Lung

Transcripts:

OTTMUST00000072632

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	20,022,896 - 20,023,396 (-)	MPROMDB

RGD ID:

6833932

Promoter ID:

MM_KWN:33865

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day2, 3T3L1_Day3, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Lung, MEF_B4, MEF_B6

Transcripts:

ENSMUST00000118015, ENSMUST00000119748

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	20,054,629 - 20,055,129 (-)	MPROMDB

RGD ID:

6880326

Promoter ID:

EPDNEW_M3614

Type:

initiation region

Name:

Gyg_1

Description:

Mus musculus glycogenin , transcript variant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	3	20,155,064 - 20,155,124	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1351614	AgrOrtholog
Ensembl Genes	ENSMUSG00000019528	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000118015.9	UniProtKB/TrEMBL
	ENSMUST00000178328	ENTREZGENE
	ENSMUST00000178328.8	UniProtKB/Swiss-Prot
	ENSMUST00000184552	ENTREZGENE
	ENSMUST00000184552.2	UniProtKB/TrEMBL
InterPro	Glyco_trans_8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GNT1/Glycosyltrans_8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:27357	UniProtKB/Swiss-Prot
MGD	MGI:1351614	ENTREZGENE
NCBI Gene	27357	ENTREZGENE
PANTHER	GLYCOGENIN SUBFAMILY MEMBER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GLYCOGENIN-1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Glyco_transf_8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Gyg1	PhenoGen
Superfamily-SCOP	SSF53448	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	GLYG_MOUSE	UniProtKB/Swiss-Prot
	K3W4S6_MOUSE	UniProtKB/TrEMBL
	Q3TWR9	ENTREZGENE
	Q9R062	ENTREZGENE
	V9GX26	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	Q3TWR9	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-06-05	Gyg1	glycogenin 1	Gyg	glycogenin	Symbol and/or name updated	27372883	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - OMIM

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