Cd79b (CD79B antigen) - Rat Genome Database

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Gene: Cd79b (CD79B antigen) Mus musculus
Analyze
Symbol: Cd79b
Name: CD79B antigen
RGD ID: 733368
MGI Page MGI
Description: Enables identical protein binding activity and transmembrane signaling receptor activity. Involved in B cell receptor signaling pathway. Acts upstream of or within response to bacterium. Located in external side of plasma membrane. Part of B cell receptor complex. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system gland; and liver and biliary system. Human ortholog(s) of this gene implicated in agammaglobulinemia 6 and lymphoma (multiple). Orthologous to human CD79B (CD79b molecule).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: B-cell antigen receptor complex-associated protein beta chain; B-cell-specific glycoprotein B29; B29; Ig; Ig-be; Ig-beta; Igb; Igbe; Igbeta; immunoglobulin-associated B29 protein; immunoglobulin-associated beta
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911106,202,167 - 106,205,388 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11106,202,167 - 106,205,588 (-)EnsemblGRCm39 Ensembl
GRCm3811106,311,341 - 106,314,562 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11106,311,341 - 106,314,762 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711106,172,655 - 106,175,843 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611106,127,431 - 106,130,760 (-)NCBIMGSCv36mm8
Celera11118,042,026 - 118,045,214 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1168.89NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. An alternatively spliced form of CD79b gene may account for altered B-cell receptor expression in B-chronic lymphocytic leukemia. Alfarano A, etal., Blood. 1999 Apr 1;93(7):2327-35.
2. Quantitative analysis of CD79b, CD5 and CD19 in mature B-cell lymphoproliferative disorders. Cabezudo E, etal., Haematologica. 1999 May;84(5):413-8.
3. Patients with primary breast and primary female genital tract diffuse large B cell lymphoma have a high frequency of MYD88 and CD79B mutations. Cao XX, etal., Ann Hematol. 2017 Nov;96(11):1867-1871. doi: 10.1007/s00277-017-3094-7. Epub 2017 Aug 12.
4. Morphologic Patterns and the Correlation With MYD88 L265P, CD79B Mutations in Primary Adrenal Diffuse Large B-Cell Lymphoma. Chen Z, etal., Am J Surg Pathol. 2020 Apr;44(4):444-455. doi: 10.1097/PAS.0000000000001386.
5. New markers for minimal residual disease detection in acute lymphoblastic leukemia. Coustan-Smith E, etal., Blood. 2011 Jun 9;117(23):6267-76. doi: 10.1182/blood-2010-12-324004. Epub 2011 Apr 12.
6. Therapeutic potential of an anti-CD79b antibody-drug conjugate, anti-CD79b-vc-MMAE, for the treatment of non-Hodgkin lymphoma. Dornan D, etal., Blood. 2009 Sep 24;114(13):2721-9. doi: 10.1182/blood-2009-02-205500. Epub 2009 Jul 24.
7. CD79b expression in B cell chronic lymphocytic leukemia: its implication for minimal residual disease detection. Garcia Vela J, etal., Leukemia. 1999 Oct;13(10):1501-5. doi: 10.1038/sj.leu.2401511.
8. Ibrutinib Unmasks Critical Role of Bruton Tyrosine Kinase in Primary CNS Lymphoma. Grommes C, etal., Cancer Discov. 2017 Sep;7(9):1018-1029. doi: 10.1158/2159-8290.CD-17-0613. Epub 2017 Jun 15.
9. MGDs mouse GO annotations MGD data from the GO Consortium
10. MGD IEA MGD IEA
11. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
12. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
13. Analysis of the B-cell receptor B29 (CD79b) gene in familial chronic lymphocytic leukemia. Payelle-Brogard B, etal., Blood. 1999 Nov 15;94(10):3516-22.
14. Anti-CD22 and anti-CD79B antibody drug conjugates are active in different molecular diffuse large B-cell lymphoma subtypes. Pfeifer M, etal., Leukemia. 2015 Jul;29(7):1578-86. doi: 10.1038/leu.2015.48. Epub 2015 Feb 24.
15. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
16. Antibody-drug conjugates targeted to CD79 for the treatment of non-Hodgkin lymphoma. Polson AG, etal., Blood. 2007 Jul 15;110(2):616-23. doi: 10.1182/blood-2007-01-066704. Epub 2007 Mar 20.
17. Expression of Ig-beta (CD79b) by chronic lymphocytic leukemia B cells that lack immunoglobulin heavy-chain allelic exclusion. Rassenti LZ and Kipps TJ, Blood. 2000 Apr 15;95(8):2725-7.
18. Mouse MP Annotation Import Pipeline RGD automated import pipeline
19. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
20. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
21. Aberrations of the B-cell receptor B29 (CD79b) gene in chronic lymphocytic leukemia. Thompson AA, etal., Blood. 1997 Aug 15;90(4):1387-94.
22. Primary diffuse large B-cell lymphomas of central nervous system exhibit remarkably high prevalence of oncogenic MYD88 and CD79B mutations. Yamada S, etal., Leuk Lymphoma. 2015 Jul;56(7):2141-5. doi: 10.3109/10428194.2014.979413. Epub 2015 Jan 14.
Additional References at PubMed
PMID:1373499   PMID:1534761   PMID:2508087   PMID:3137575   PMID:7542362   PMID:8001125   PMID:8419481   PMID:8454858   PMID:8486355   PMID:8555489   PMID:8602530   PMID:8626447  
PMID:9356446   PMID:9858563   PMID:10349636   PMID:10587346   PMID:10834841   PMID:10980384   PMID:11042159   PMID:11076861   PMID:11136817   PMID:11195349   PMID:11217851   PMID:11238609  
PMID:11514602   PMID:11862409   PMID:11869689   PMID:12097390   PMID:12165571   PMID:12477932   PMID:14610273   PMID:15024049   PMID:15240688   PMID:15489334   PMID:15661879   PMID:15661909  
PMID:15972641   PMID:16141072   PMID:16141073   PMID:16651521   PMID:16818674   PMID:16925795   PMID:17114463   PMID:17124007   PMID:17420268   PMID:18194817   PMID:19407814   PMID:19727123  
PMID:20696394   PMID:20837062   PMID:21677750   PMID:21841126   PMID:21873635   PMID:21964606   PMID:23012479   PMID:24129701   PMID:24548411   PMID:25471597   PMID:26410627   PMID:27218486  
PMID:28378742   PMID:29141870   PMID:30196744   PMID:35321883   PMID:35759728   PMID:38060829  


Genomics

Comparative Map Data
Cd79b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911106,202,167 - 106,205,388 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11106,202,167 - 106,205,588 (-)EnsemblGRCm39 Ensembl
GRCm3811106,311,341 - 106,314,562 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11106,311,341 - 106,314,762 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711106,172,655 - 106,175,843 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611106,127,431 - 106,130,760 (-)NCBIMGSCv36mm8
Celera11118,042,026 - 118,045,214 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1168.89NCBI
CD79B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381763,928,740 - 63,932,331 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1763,928,738 - 63,932,336 (-)EnsemblGRCh38hg38GRCh38
GRCh371762,006,100 - 62,009,691 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361759,359,830 - 59,363,436 (-)NCBINCBI36Build 36hg18NCBI36
Build 341759,359,831 - 59,363,446NCBI
Celera1756,394,160 - 56,397,766 (-)NCBICelera
Cytogenetic Map17q23.3NCBI
HuRef1757,373,817 - 57,377,419 (-)NCBIHuRef
CHM1_11762,070,017 - 62,073,623 (-)NCBICHM1_1
T2T-CHM13v2.01764,799,505 - 64,803,094 (-)NCBIT2T-CHM13v2.0
Cd79b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81091,739,134 - 91,742,312 (-)NCBIGRCr8
mRatBN7.21091,239,354 - 91,242,500 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1091,239,356 - 91,242,625 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1096,293,979 - 96,297,125 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01095,757,144 - 95,760,290 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01091,167,742 - 91,170,888 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01094,497,445 - 94,500,591 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1094,497,448 - 94,500,591 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01094,248,655 - 94,251,801 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41095,703,129 - 95,706,275 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11095,717,499 - 95,720,645 (-)NCBI
Celera1089,914,837 - 89,917,983 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
Cd79b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554787,909,153 - 7,913,166 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554787,909,353 - 7,912,814 (+)NCBIChiLan1.0ChiLan1.0
CD79B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21980,111,641 - 80,115,624 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11784,931,947 - 84,935,931 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01758,022,375 - 58,026,359 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11763,116,722 - 63,120,335 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1763,116,722 - 63,120,335 (-)Ensemblpanpan1.1panPan2
CD79B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1911,834,230 - 11,844,946 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl911,842,190 - 11,844,843 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha912,801,263 - 12,804,585 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0913,502,931 - 13,506,253 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl913,502,935 - 13,506,208 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1912,449,684 - 12,453,001 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0915,079,310 - 15,082,632 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0915,081,786 - 15,085,109 (+)NCBIUU_Cfam_GSD_1.0
Cd79b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560214,657,115 - 14,660,367 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365414,534,246 - 4,537,590 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365414,534,233 - 4,537,448 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CD79B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1215,053,007 - 15,056,438 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11215,052,966 - 15,056,441 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21215,044,369 - 15,047,831 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CD79B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11657,339,492 - 57,343,085 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1657,339,457 - 57,343,358 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607727,952,012 - 27,955,604 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cd79b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248491,429,912 - 1,432,955 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248491,429,446 - 1,432,835 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cd79b
89 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:391
Count of miRNA genes:168
Interacting mature miRNAs:194
Transcripts:ENSMUST00000044228, ENSMUST00000167143
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
1301012Vispl_mvisual placing (mouse)Not determined11101022590121973369Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1301535Pas5b_mpulmonary adenoma susceptibility 5b (mouse)Not determined1196176465108806384Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
12910539Sstapa3_msuseptibility to Staphylococcus aureus infection 3 (mouse)1196897693110603991Mouse
4141612Cia40_mcollagen induced arthritis 40 (mouse)Not determined11103273992115021444Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177770978111771099Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94437183118022724Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1192939373112544554Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177437183111437322Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172726125106726289Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172818615106818733Mouse
11341721Rvfs2_mRift Valley fever susceptibility 2 (mouse)11100254186120887165Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177437183111437322Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181574481115574636Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187490826121873369Mouse
14746970Manh71_mmandible shape 71 (mouse)1179416257113416257Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172818615106818733Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182377698116377820Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195403965121973369Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194063779118022724Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198352609121973369Mouse
1300957Pbd1_mpeak bone density 1 (mouse)Not determined11102344123112384123Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177063779111063918Mouse
10043976Obq33_mobesity QTL 33 (mouse)Not determined1198500469121973369Mouse
1301057Nidd4_mnon-insulin-dependent diabetes mellitus 4 (mouse)Not determined1196810136121973369Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195403965121973369Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
1300962Cd8mts4_mCD8 memory T cell subset 4 (mouse)Not determined1196137674121973369Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193229183121973369Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194190826118890826Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186608320120608320Mouse
14700693Ppiq12_mprepulse inhibition QTL 12 (mouse)11101504820114472363Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191604608121973369Mouse
14700694Ppiq13_mprepulse inhibition QTL 13 (mouse)11101504820114472363Mouse
14700695Ppiq14_mprepulse inhibition QTL 14 (mouse)11101504820114472363Mouse
10044001Alcw8_malcohol withdrawal 8 (mouse)Not determined1199254187121973369Mouse
14700696Ppiq15_mprepulse inhibition QTL 15 (mouse)11101504820114472363Mouse
11553867Stmm5_mskin tumor modifier of MSM 5 (mouse)11100058103121973369Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187502600121502698Mouse

Markers in Region
J03857  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811106,311,692 - 106,311,797UniSTSGRCm38
MGSCv3711106,173,006 - 106,173,111UniSTSGRCm37
Celera11118,042,377 - 118,042,482UniSTS
Cytogenetic Map11E1UniSTS
cM Map1165.0UniSTS
Whitehead/MRC_RH111429.86UniSTS
Cd79b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811106,312,024 - 106,312,814UniSTSGRCm38
MGSCv3711106,173,338 - 106,174,128UniSTSGRCm37
Celera11118,042,709 - 118,043,499UniSTS
Cytogenetic Map11E1UniSTS
cM Map1165.0UniSTS
Igb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811106,311,395 - 106,311,518UniSTSGRCm38
MGSCv3711106,172,709 - 106,172,832UniSTSGRCm37
Celera11118,042,080 - 118,042,203UniSTS
Cytogenetic Map11E1UniSTS
cM Map1165.0UniSTS
Igb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811106,312,644 - 106,313,712UniSTSGRCm38
MGSCv3711106,173,958 - 106,175,026UniSTSGRCm37
Celera11118,043,329 - 118,044,397UniSTS
Cytogenetic Map11E1UniSTS
cM Map1165.0UniSTS
Cd79b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11E1UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000044228   ⟹   ENSMUSP00000048239
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11106,202,167 - 106,205,588 (-)Ensembl
GRCm38.p6 Ensembl11106,311,341 - 106,314,762 (-)Ensembl
Ensembl Acc Id: ENSMUST00000167143   ⟹   ENSMUSP00000129029
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11106,202,170 - 106,205,355 (-)Ensembl
GRCm38.p6 Ensembl11106,311,344 - 106,314,529 (-)Ensembl
RefSeq Acc Id: NM_001313939   ⟹   NP_001300868
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,202,167 - 106,205,388 (-)NCBI
GRCm3811106,311,341 - 106,314,562 (-)NCBI
Sequence:
RefSeq Acc Id: NM_008339   ⟹   NP_032365
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,202,167 - 106,205,388 (-)NCBI
GRCm3811106,311,341 - 106,314,562 (-)NCBI
MGSCv3711106,172,655 - 106,175,843 (-)RGD
Celera11118,042,026 - 118,045,214 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_032365   ⟸   NM_008339
- Peptide Label: isoform 1 precursor
- UniProtKB: Q4FJP4 (UniProtKB/Swiss-Prot),   P15530 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001300868   ⟸   NM_001313939
- Peptide Label: isoform 2 precursor
- UniProtKB: P15530 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000129029   ⟸   ENSMUST00000167143
Ensembl Acc Id: ENSMUSP00000048239   ⟸   ENSMUST00000044228
Protein Domains
Ig-like   Ig-like V-type   ITAM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P15530-F1-model_v2 AlphaFold P15530 1-228 view protein structure

Promoters
RGD ID:6846823
Promoter ID:MM_ACW:9160
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:CD79B.BSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611106,174,696 - 106,175,196 (-)MPROMDB
RGD ID:6820594
Promoter ID:MM_KWN:10242
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   Spleen
Transcripts:OTTMUST00000007187
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611106,175,536 - 106,176,036 (-)MPROMDB
RGD ID:8677082
Promoter ID:EPDNEW_M16572
Type:initiation region
Name:Cd79b_1
Description:Mus musculus CD79B antigen , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811106,314,561 - 106,314,621EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96431 AgrOrtholog
Ensembl Genes ENSMUSG00000040592 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000044228.11 UniProtKB/TrEMBL
  ENSMUST00000167143 ENTREZGENE
  ENSMUST00000167143.2 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CD79a/CD79b UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_V-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Phos_immunorcpt_sig_ITAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:15985 UniProtKB/Swiss-Prot
MGD MGI:96431 ENTREZGENE
NCBI Gene 15985 ENTREZGENE
PANTHER B-CELL ANTIGEN RECEPTOR COMPLEX-ASSOCIATED PROTEIN BETA CHAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR14334 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ITAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  V-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cd79b PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ITAM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ITAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B1ARJ9_MOUSE UniProtKB/TrEMBL
  CD79B_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q4FJP4 ENTREZGENE
UniProt Secondary Q4FJP4 UniProtKB/Swiss-Prot