Nacc1 (nucleus accumbens associated 1, BEN and BTB (POZ) domain containing) - Rat Genome Database

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Gene: Nacc1 (nucleus accumbens associated 1, BEN and BTB (POZ) domain containing) Mus musculus
Analyze
Symbol: Nacc1
Name: nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
RGD ID: 732622
MGI Page MGI
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of DNA-templated transcription; positive regulation of cell population proliferation; and regulation of transcription by RNA polymerase II. Predicted to be located in cell junction and nucleoplasm. Is expressed in several structures, including blastocyst; cartilage; gut epithelium; nervous system; and otocyst. Orthologous to human NACC1 (nucleus accumbens associated 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2010001H03Rik; 4930511N13Rik; BTB (POZ) domain containing 14B; BTB/POZ domain-containing protein 14B; Btbd14b; Na; NAC-1; Nac1; nucleus accumbens-associated protein 1; transcriptional repressor NAC1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm15784   Gm8668  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,397,106 - 85,414,528 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl885,397,108 - 85,414,531 (-)EnsemblGRCm39 Ensembl
GRCm38884,670,477 - 84,687,862 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,670,479 - 84,687,902 (-)EnsemblGRCm38mm10GRCm38
MGSCv37887,194,378 - 87,211,761 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36887,560,584 - 87,577,940 (-)NCBIMGSCv36mm8
Celera888,970,386 - 88,987,750 (-)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.02NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14521994   PMID:14610273   PMID:14720510   PMID:15489334   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:17093407   PMID:17699672   PMID:17945361   PMID:17967808   PMID:18799693   PMID:19366700   PMID:20362541   PMID:21267068   PMID:21589869   PMID:21873635  
PMID:22083510   PMID:22761335   PMID:22770845   PMID:22922362   PMID:23022214   PMID:23395962   PMID:23892456   PMID:23922682   PMID:24200849   PMID:24425205   PMID:24702277   PMID:26832399  
PMID:27113764   PMID:28548937   PMID:28671696   PMID:28781078   PMID:31412978   PMID:34709266   PMID:36150745   PMID:37465969   PMID:37839992   PMID:38355793   PMID:38388424  


Genomics

Comparative Map Data
Nacc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,397,106 - 85,414,528 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl885,397,108 - 85,414,531 (-)EnsemblGRCm39 Ensembl
GRCm38884,670,477 - 84,687,862 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,670,479 - 84,687,902 (-)EnsemblGRCm38mm10GRCm38
MGSCv37887,194,378 - 87,211,761 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36887,560,584 - 87,577,940 (-)NCBIMGSCv36mm8
Celera888,970,386 - 88,987,750 (-)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.02NCBI
NACC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381913,116,852 - 13,141,147 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1913,116,862 - 13,141,147 (+)EnsemblGRCh38hg38GRCh38
GRCh371913,229,078 - 13,251,961 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361913,090,109 - 13,112,959 (+)NCBINCBI36Build 36hg18NCBI36
Build 341913,090,108 - 13,112,958NCBI
Celera1913,119,516 - 13,142,359 (+)NCBICelera
Cytogenetic Map19p13.13NCBI
HuRef1912,818,385 - 12,824,342 (+)NCBIHuRef
CHM1_11913,230,097 - 13,252,914 (+)NCBICHM1_1
T2T-CHM13v2.01913,241,986 - 13,266,361 (+)NCBIT2T-CHM13v2.0
Nacc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,373,436 - 40,391,351 (+)NCBIGRCr8
mRatBN7.21923,468,688 - 23,486,528 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1923,468,419 - 23,486,528 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,291,544 - 30,307,336 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01930,945,921 - 30,961,713 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01933,168,616 - 33,184,407 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,783,686 - 25,801,526 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,783,900 - 25,801,526 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,761,685 - 36,777,149 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,131,782 - 25,148,664 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11925,136,607 - 25,153,490 (+)NCBI
Celera1923,022,358 - 23,037,970 (+)NCBICelera
Cytogenetic Map19q11NCBI
Nacc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541532,136,439 - 32,152,059 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541532,135,633 - 32,152,059 (+)NCBIChiLan1.0ChiLan1.0
NACC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22018,045,660 - 18,071,480 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11917,046,295 - 17,072,134 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01912,679,837 - 12,704,470 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11913,412,462 - 13,439,679 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1913,412,462 - 13,439,679 (+)Ensemblpanpan1.1panPan2
NACC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12049,080,490 - 49,099,623 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2049,083,132 - 49,099,884 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2048,953,628 - 48,973,924 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02049,598,113 - 49,618,416 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2049,598,146 - 49,618,338 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12048,809,682 - 48,829,975 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02049,236,049 - 49,256,329 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02049,478,440 - 49,498,736 (-)NCBIUU_Cfam_GSD_1.0
Nacc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118208,184,827 - 208,190,537 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366592,163,643 - 2,169,873 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366592,164,147 - 2,169,879 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NACC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl265,922,126 - 65,938,759 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1265,920,352 - 65,938,840 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2266,247,148 - 66,262,235 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NACC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1611,800,219 - 11,825,232 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl611,818,968 - 11,825,412 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660747,958,824 - 7,985,232 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nacc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624901659,977 - 676,322 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624901658,861 - 676,322 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Nacc1
1307 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1389
Count of miRNA genes:582
Interacting mature miRNAs:720
Transcripts:ENSMUST00000001975
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88079340489740987Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined871032003105032123Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined876411976110412125Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871740461124622354Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6418673698186736Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86466617698666325Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)882345783116345783Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879808806113809031Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85913640493136404Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined876411976110412125Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined872122809106123021Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86151347995513605Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871829531105829637Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873929123107929226Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7158942790929226Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85233484386334843Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881819296115819296Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined871032003105032123Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)874126628126826739Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined879245241113245331Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71740461124622354Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined876402145110402251Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_025788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC145556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000001975   ⟹   ENSMUSP00000001975
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,397,108 - 85,414,531 (-)Ensembl
GRCm38.p6 Ensembl884,670,479 - 84,687,902 (-)Ensembl
Ensembl Acc Id: ENSMUST00000238301   ⟹   ENSMUSP00000158781
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,403,204 - 85,413,782 (-)Ensembl
GRCm38.p6 Ensembl884,676,575 - 84,687,153 (-)Ensembl
Ensembl Acc Id: ENSMUST00000238434   ⟹   ENSMUSP00000158606
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,399,769 - 85,403,624 (-)Ensembl
GRCm38.p6 Ensembl884,673,140 - 84,676,995 (-)Ensembl
Ensembl Acc Id: ENSMUST00000238449   ⟹   ENSMUSP00000158624
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,403,313 - 85,414,220 (-)Ensembl
GRCm38.p6 Ensembl884,676,684 - 84,687,591 (-)Ensembl
Ensembl Acc Id: ENSMUST00000238687   ⟹   ENSMUSP00000158582
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl885,403,681 - 85,414,220 (-)Ensembl
GRCm38.p6 Ensembl884,677,052 - 84,687,591 (-)Ensembl
RefSeq Acc Id: NM_025788   ⟹   NP_080064
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,397,108 - 85,414,491 (-)NCBI
GRCm38884,670,479 - 84,687,862 (-)NCBI
MGSCv37887,194,378 - 87,211,761 (-)RGD
Celera888,970,386 - 88,987,750 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006531292   ⟹   XP_006531355
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,397,106 - 85,413,855 (-)NCBI
GRCm38884,670,477 - 84,687,148 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006531293   ⟹   XP_006531356
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,397,106 - 85,414,244 (-)NCBI
GRCm38884,670,477 - 84,687,605 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006531294   ⟹   XP_006531357
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,397,106 - 85,414,233 (-)NCBI
GRCm38884,670,477 - 84,687,594 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006531295   ⟹   XP_006531358
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,397,106 - 85,414,528 (-)NCBI
GRCm38884,670,477 - 84,687,839 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154244   ⟹   XP_036010137
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,397,106 - 85,413,855 (-)NCBI
Sequence:
RefSeq Acc Id: NP_080064   ⟸   NM_025788
- UniProtKB: Q80X97 (UniProtKB/Swiss-Prot),   Q9CZ72 (UniProtKB/Swiss-Prot),   Q7TSZ8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006531358   ⟸   XM_006531295
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006531356   ⟸   XM_006531293
- Peptide Label: isoform X1
- UniProtKB: Q80X97 (UniProtKB/Swiss-Prot),   Q9CZ72 (UniProtKB/Swiss-Prot),   Q7TSZ8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006531357   ⟸   XM_006531294
- Peptide Label: isoform X1
- UniProtKB: Q80X97 (UniProtKB/Swiss-Prot),   Q9CZ72 (UniProtKB/Swiss-Prot),   Q7TSZ8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006531355   ⟸   XM_006531292
- Peptide Label: isoform X1
- UniProtKB: Q80X97 (UniProtKB/Swiss-Prot),   Q9CZ72 (UniProtKB/Swiss-Prot),   Q7TSZ8 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000158781   ⟸   ENSMUST00000238301
Ensembl Acc Id: ENSMUSP00000158624   ⟸   ENSMUST00000238449
Ensembl Acc Id: ENSMUSP00000158606   ⟸   ENSMUST00000238434
Ensembl Acc Id: ENSMUSP00000158582   ⟸   ENSMUST00000238687
Ensembl Acc Id: ENSMUSP00000001975   ⟸   ENSMUST00000001975
RefSeq Acc Id: XP_036010137   ⟸   XM_036154244
- Peptide Label: isoform X2
Protein Domains
BEN   BTB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TSZ8-F1-model_v2 AlphaFold Q7TSZ8 1-514 view protein structure

Promoters
RGD ID:8667673
Promoter ID:EPDNEW_M11868
Type:multiple initiation site
Name:Nacc1_2
Description:Mus musculus nucleus accumbens associated 1, BEN and BTB domaincontaining , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11869  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38884,687,084 - 84,687,144EPDNEW
RGD ID:8667675
Promoter ID:EPDNEW_M11869
Type:initiation region
Name:Nacc1_1
Description:Mus musculus nucleus accumbens associated 1, BEN and BTB domaincontaining , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11868  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38884,687,871 - 84,687,931EPDNEW
RGD ID:6843523
Promoter ID:MM_KWN:55081
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_025788_NACC1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36887,211,471 - 87,212,007 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914080 AgrOrtholog
Ensembl Genes ENSMUSG00000001910 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000001975 ENTREZGENE
  ENSMUST00000001975.6 UniProtKB/Swiss-Prot
  ENSMUST00000238301.2 UniProtKB/TrEMBL
  ENSMUST00000238434.2 UniProtKB/TrEMBL
  ENSMUST00000238449.2 UniProtKB/TrEMBL
  ENSMUST00000238687.2 UniProtKB/TrEMBL
Gene3D-CATH BEN domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro BEN_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB/POZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnFinger_BTB_dom_contain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:66830 UniProtKB/Swiss-Prot
MGD MGI:1914080 ENTREZGENE
NCBI Gene 66830 ENTREZGENE
PANTHER AGAP004733-PA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEUS ACCUMBENS-ASSOCIATED PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BEN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Nacc1 PhenoGen
PROSITE BEN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BEN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A571BE53_MOUSE UniProtKB/TrEMBL
  A0A571BEI5_MOUSE UniProtKB/TrEMBL
  A0A571BER1_MOUSE UniProtKB/TrEMBL
  A0A571BFZ2_MOUSE UniProtKB/TrEMBL
  NACC1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q80X97 ENTREZGENE
  Q9CZ72 ENTREZGENE
UniProt Secondary Q80X97 UniProtKB/Swiss-Prot
  Q9CZ72 UniProtKB/Swiss-Prot