Grina (glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)) - Rat Genome Database

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Gene: Grina (glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)) Mus musculus
Analyze
Symbol: Grina
Name: glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
RGD ID: 732456
MGI Page MGI
Description: Enables transmembrane transporter binding activity. Acts upstream of or within endoplasmic reticulum calcium ion homeostasis and negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway. Located in Golgi apparatus and endoplasmic reticulum. Is expressed in cerebral cortex; genitourinary system; and heart valve. Orthologous to human GRINA (glutamate ionotropic receptor NMDA type subunit associated protein 1).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 1110025J15Rik; glutamate [NMDA] receptor-associated protein 1; Lag; NMDA receptor glutamate-binding subunit; protein lifeguard 1; Tmbim; Tmbim3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391576,130,917 - 76,134,109 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1576,130,964 - 76,134,104 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381576,246,717 - 76,249,909 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1576,246,764 - 76,249,904 (+)Ensemblmm10GRCm38
MGSCv371576,077,237 - 76,080,334 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361576,074,062 - 76,077,159 (+)NCBIMGSCv36mm8
Celera1577,746,755 - 77,749,852 (+)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1535.59NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-alpha-phellandrene  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-acetamidofluorene  (EXP)
2-butoxyethanol  (EXP)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (EXP)
5-fluorouracil  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-phellandrene  (ISO)
amiodarone  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
azoxystrobin  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (ISO)
bexarotene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
bisphenol F  (ISO)
C60 fullerene  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP,ISO)
chromium(6+)  (EXP)
cisplatin  (ISO)
clobetasol  (EXP)
clofibrate  (EXP,ISO)
clotrimazole  (ISO)
cocaine  (ISO)
copper(II) chloride  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diazinon  (ISO)
dibutyl phthalate  (ISO)
dieldrin  (ISO)
diethylstilbestrol  (ISO)
diquat  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
ethanol  (ISO)
fenthion  (EXP)
finasteride  (ISO)
folic acid  (EXP)
fulvestrant  (ISO)
gentamycin  (ISO)
glyphosate  (ISO)
imidacloprid  (ISO)
indometacin  (ISO)
inulin  (EXP)
isoprenaline  (EXP)
ketoconazole  (ISO)
L-ethionine  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methamphetamine  (EXP)
methimazole  (ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (ISO)
nickel atom  (ISO)
omeprazole  (ISO)
paracetamol  (EXP,ISO)
pentachlorophenol  (EXP)
perfluorodecanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (EXP)
pinostrobin  (ISO)
pirinixic acid  (EXP,ISO)
rac-lactic acid  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
thiabendazole  (ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
tungsten  (EXP)
valproic acid  (EXP,ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
endoplasmic reticulum  (IBA,IDA)
Golgi apparatus  (IBA,IDA)
Golgi membrane  (IEA,ISO)
membrane  (IBA,IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18055048   PMID:18287559   PMID:21267068  
PMID:21614515   PMID:21677750   PMID:21873635   PMID:22240901   PMID:31211943   PMID:31683519   PMID:34321999   PMID:35364055  


Genomics

Comparative Map Data
Grina
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391576,130,917 - 76,134,109 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1576,130,964 - 76,134,104 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381576,246,717 - 76,249,909 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1576,246,764 - 76,249,904 (+)Ensemblmm10GRCm38
MGSCv371576,077,237 - 76,080,334 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361576,074,062 - 76,077,159 (+)NCBIMGSCv36mm8
Celera1577,746,755 - 77,749,852 (+)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1535.59NCBI
GRINA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388143,990,056 - 143,993,415 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8143,990,056 - 143,993,415 (+)Ensemblhg38GRCh38
GRCh378145,064,224 - 145,067,583 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 368145,136,214 - 145,139,571 (+)NCBIBuild 36Build 36hg18NCBI36
Cytogenetic Map8q24.3NCBI
HuRef8140,305,288 - 140,323,781 (+)NCBIHuRef
CHM1_18145,104,475 - 145,107,832 (+)NCBICHM1_1
T2T-CHM13v2.08145,150,254 - 145,153,613 (+)NCBIT2T-CHM13v2.0
Grina
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87109,842,870 - 109,846,048 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7109,843,196 - 109,846,042 (+)EnsemblGRCr8
mRatBN7.27107,962,194 - 107,965,372 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7107,962,207 - 107,965,366 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7109,705,794 - 109,708,972 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07111,929,476 - 111,932,654 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07111,887,957 - 111,891,135 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07117,304,742 - 117,307,916 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7117,304,742 - 117,307,916 (+)Ensemblrn6Rnor6.0
Rnor_5.07117,290,445 - 117,293,621 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47114,277,208 - 114,280,339 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7104,314,740 - 104,317,914 (+)NCBICelera
RGSC_v3.17114,311,439 - 114,314,569 (+)NCBI
Cytogenetic Map7q34NCBI
Grina
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554542,658,490 - 2,660,021 (+)Ensembl
ChiLan1.0NW_0049554542,657,374 - 2,660,591 (+)NCBIChiLan1.0ChiLan1.0
GRINA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27161,479,190 - 161,483,099 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18137,009,368 - 137,012,765 (+)NCBINHGRI_mPanPan1
PanPan1.1 Ensembl8143,749,331 - 143,752,071 (+)EnsemblpanPan2panpan1.1
GRINA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11337,512,129 - 37,514,303 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1337,512,217 - 37,514,257 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1337,475,101 - 37,478,196 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01337,987,687 - 37,990,781 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.11337,659,794 - 37,662,885 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01337,787,997 - 37,791,086 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01338,264,550 - 38,267,645 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Grina
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303754,364 - 757,621 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049364708,180,468 - 8,183,694 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GRINA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4682,835 - 686,116 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.14682,823 - 686,144 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GRINA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18138,199,642 - 138,202,989 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8138,200,792 - 138,202,453 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660391,670,935 - 1,674,284 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Grina
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473512,821,243 - 12,822,787 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473512,820,678 - 12,823,920 (-)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Grina
79 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:452
Count of miRNA genes:299
Interacting mature miRNAs:341
Transcripts:ENSMUST00000023225
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301779Dpml_mdopamine loss (mouse)Not determined155100469476794493Mouse
38501067Tip3_mtuberculosis immunophenotype 3, IFN-g level (mouse)155356339689584203Mouse
1300627Sluc26_msusceptibility to lung cancer 26 (mouse)Not determined1570345653104073951Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
15092079Igly6_mIgG glycosylation 6, GP6 (mouse)157410054082674156Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
1357703Vtbt17_mvertebral trabecular bone trait 17 (mouse)Not determined154455331378553437Mouse
13504731Cath5_mcarotid atherosclerosis 5 (mouse)155478912988789129Mouse
1558786Msq1_mMAV-1 susceptibility QTL 1 (mouse)Not determined156338964681086436Mouse
12791003Aath8_maortic arch atherosclerosis 8 (mouse)1573430144104073951Mouse
1301006Hfib1_mhepatic fibrogenesis 1 (mouse)Not determined154730633481306479Mouse
27095936Ulnl4_mulna length 4, 5 week (mouse)155676339687684201Mouse
10755515Amzn3_manatomical modifier of Zfp423 3 (mouse)154638964680389845Mouse
1301171Brm2_mbrachyury modifier 2 (mouse)Not determined156552537699525499Mouse
1301429Pcir3_mperiosteal circumference 3 (mouse)Not determined154846536282465496Mouse
1302197Bhr2_mbronchial hyperresponsiveness 2 (mouse)Not determined1564306334103425899Mouse
26884402Cvht9_mcranial vault height 9, 16 week (mouse)154216339695497881Mouse
1357756Alaa4_malopecia areata 4 (mouse)Not determined154638964680389845Mouse
1302074Bmd4_mbone mineral density 4 (mouse)Not determined1556186708103425899Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927302279474762Mouse
26884399Humsd1_mhumerus midshaft diameter 1, 5 week (mouse)1548363396101708435Mouse
26884397Humsd5_mhumerus midshaft diameter 5, 10 week (mouse)154836339698397881Mouse
1300648Dbsty4_mdiabesity 4 (mouse)Not determined1570349271104073951Mouse
10412067Pain2_mpain 2 (mouse)Not determined155164533985645626Mouse
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402203102896555Mouse
4142198Hbtq_mhabituation QTL (mouse)Not determined155116070885160833Mouse
1357407Pfat4_mpredicted fat percentage 4 (mouse)8.6Body fat amountpredicted fat percentage155711700591117153Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800146102008435Mouse
1301568Tria2_mT-cell receptor induced activation 2 (mouse)Not determined154485914178859281Mouse
1302080Szs13_mseizure susceptibility 13 (mouse)Not determined155168583285694449Mouse
1300800Ses3_msalmonella enteritidis susceptibility 3 (mouse)Not determined155711700591117153Mouse
10045637Heal27_mwound healing/regeneration 29 (mouse)Not determined155141836185418511Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578416103425899Mouse
4141921Pstc3_mperiosteal circumference 3 (mouse)Not determined1567270698101270847Mouse
1301708Cocrb14_mcocaine related behavior 14 (mouse)Not determined155180651585806651Mouse
12880420V25Dq8_mvitamin D inactive form serum level QTL 8 (mouse)156158420095584200Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15612948176384200Mouse
1302002Cocia2_mcocaine induced activation 2 (mouse)Not determined157237245979899178Mouse
14747011Mancz13_mmandible centroid size 13 (mouse)1572382669104073951Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1300726Pitm4_mprion incubation time 4 (mouse)Not determined1570349271104073951Mouse
1301119Drb7_mdopamine receptor binding 7 (mouse)Not determined156533657899341028Mouse
4141135Cia35_mcollagen induced arthritis 35 (mouse)Not determined156481182698811946Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse
13442492Mecth2_mmechanosensation threshold 2 (mouse)157466284979387201Mouse
1301601Faq9_mfluctuating asymmetry QTL 9 (mouse)Not determined156316390397163995Mouse
1301472Pain1_mpain 1 (mouse)Not determined157532084690813185Mouse
27226729Tibmd2_mtibia midshaft diameter 2, 5 week (mouse)153800024486684201Mouse
1301860Gct3_mgranulosa cell tumorigenesis 3 (mouse)Not determined154740959681409691Mouse
1300844Emo2_memotionality 2 (mouse)Not determined157237245976794493Mouse

Markers in Region
RH129014  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381576,249,698 - 76,249,880UniSTSGRCm38
MGSCv371576,080,128 - 76,080,310UniSTSGRCm37
Celera1577,749,646 - 77,749,828UniSTS
Cytogenetic Map15E1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_023168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030248690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC110211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF182040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000023225   ⟹   ENSMUSP00000023225
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1576,130,975 - 76,134,104 (+)Ensembl
GRCm38.p6 Ensembl1576,246,775 - 76,249,904 (+)Ensembl
Ensembl Acc Id: ENSMUST00000229380   ⟹   ENSMUSP00000155771
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1576,131,030 - 76,132,143 (+)Ensembl
GRCm38.p6 Ensembl1576,246,830 - 76,247,943 (+)Ensembl
Ensembl Acc Id: ENSMUST00000229772   ⟹   ENSMUSP00000154982
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1576,130,964 - 76,132,317 (+)Ensembl
GRCm38.p6 Ensembl1576,246,764 - 76,248,117 (+)Ensembl
Ensembl Acc Id: ENSMUST00000229916
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1576,132,264 - 76,133,450 (+)Ensembl
GRCm38.p6 Ensembl1576,248,064 - 76,249,250 (+)Ensembl
Ensembl Acc Id: ENSMUST00000230347   ⟹   ENSMUSP00000155539
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1576,130,970 - 76,132,518 (+)Ensembl
GRCm38.p6 Ensembl1576,246,770 - 76,248,318 (+)Ensembl
RefSeq Acc Id: NM_023168   ⟹   NP_075657
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391576,131,007 - 76,134,104 (+)NCBI
GRCm381576,246,807 - 76,249,904 (+)NCBI
MGSCv371576,077,237 - 76,080,334 (+)RGD
Celera1577,746,755 - 77,749,852 (+)RGD
cM Map15 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006521249   ⟹   XP_006521312
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391576,130,917 - 76,134,109 (+)NCBI
GRCm381576,246,717 - 76,249,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006521250   ⟹   XP_006521313
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391576,130,917 - 76,134,109 (+)NCBI
GRCm381576,246,717 - 76,249,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006521251   ⟹   XP_006521314
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391576,130,917 - 76,134,109 (+)NCBI
GRCm381576,246,717 - 76,249,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011245709   ⟹   XP_011244011
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391576,130,917 - 76,134,109 (+)NCBI
GRCm381576,246,717 - 76,249,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030248690   ⟹   XP_030104550
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391576,130,917 - 76,134,109 (+)NCBI
GRCm381576,246,717 - 76,249,909 (+)NCBI
Sequence:
RefSeq Acc Id: NP_075657   ⟸   NM_023168
- UniProtKB: Q8CI25 (UniProtKB/Swiss-Prot),   Q9ESF4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006521313   ⟸   XM_006521250
- Peptide Label: isoform X1
- UniProtKB: Q8CI25 (UniProtKB/Swiss-Prot),   Q9ESF4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006521314   ⟸   XM_006521251
- Peptide Label: isoform X1
- UniProtKB: Q8CI25 (UniProtKB/Swiss-Prot),   Q9ESF4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006521312   ⟸   XM_006521249
- Peptide Label: isoform X1
- UniProtKB: Q8CI25 (UniProtKB/Swiss-Prot),   Q9ESF4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011244011   ⟸   XM_011245709
- Peptide Label: isoform X1
- UniProtKB: Q8CI25 (UniProtKB/Swiss-Prot),   Q9ESF4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030104550   ⟸   XM_030248690
- Peptide Label: isoform X1
- UniProtKB: Q9ESF4 (UniProtKB/Swiss-Prot),   Q8CI25 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000155539   ⟸   ENSMUST00000230347
Ensembl Acc Id: ENSMUSP00000154982   ⟸   ENSMUST00000229772
Ensembl Acc Id: ENSMUSP00000155771   ⟸   ENSMUST00000229380
Ensembl Acc Id: ENSMUSP00000023225   ⟸   ENSMUST00000023225

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9ESF4-F1-model_v2 AlphaFold Q9ESF4 1-345 view protein structure

Promoters
RGD ID:6826078
Promoter ID:MM_KWN:18849
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_023168
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361576,077,084 - 76,077,584 (+)MPROMDB
RGD ID:6847195
Promoter ID:MM_ACW:18468
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:GRINA.FSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361576,078,551 - 76,079,051 (+)MPROMDB
RGD ID:8684086
Promoter ID:EPDNEW_M20074
Type:initiation region
Name:Grina_1
Description:Mus musculus glutamate receptor, ionotropic, N-methyl D-aspartate-associatedprotein 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381576,246,800 - 76,246,860EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1913418 AgrOrtholog
Ensembl Genes ENSMUSG00000022564 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000023225 ENTREZGENE
  ENSMUST00000023225.8 UniProtKB/Swiss-Prot
InterPro Bax_inhibitor_1-related UniProtKB/Swiss-Prot
KEGG Report mmu:66168 UniProtKB/Swiss-Prot
MGD MGI:1913418 ENTREZGENE
NCBI Gene 66168 ENTREZGENE
PANTHER PROTEIN LIFEGUARD 1 UniProtKB/Swiss-Prot
  PTHR23291 UniProtKB/Swiss-Prot
Pfam Bax1-I UniProtKB/Swiss-Prot
PhenoGen Grina PhenoGen
UniProt A0A2R8VHD1_MOUSE UniProtKB/TrEMBL
  A0A2R8VHX7_MOUSE UniProtKB/TrEMBL
  A0A2R8VI53_MOUSE UniProtKB/TrEMBL
  LFG1_MOUSE UniProtKB/Swiss-Prot
  Q8CI25 ENTREZGENE
  Q9CWB0_MOUSE UniProtKB/TrEMBL
  Q9ESF4 ENTREZGENE
UniProt Secondary Q8CI25 UniProtKB/Swiss-Prot