Uchl3 (ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)) - Rat Genome Database

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Gene: Uchl3 (ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)) Mus musculus
Analyze
Symbol: Uchl3
Name: ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
RGD ID: 731674
MGI Page MGI
Description: Enables deubiquitinase activity. Involved in cellular response to insulin stimulus; positive regulation of fat cell differentiation; and protein catabolic process. Acts upstream of or within several processes, including adult walking behavior; eating behavior; and protein deubiquitination. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in cytoplasm. Is expressed in several structures, including embryo ectoderm; genitourinary system; gut; hemolymphoid system gland; and liver. Orthologous to human UCHL3 (ubiquitin C-terminal hydrolase L3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ubiquitin carboxyl-terminal hydrolase isozyme L3; ubiquitin thioesterase L3; ubiquitin thiolesterase; UCH-L3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914101,891,387 - 101,933,561 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14101,891,403 - 101,933,561 (+)EnsemblGRCm39 Ensembl
GRCm3814101,653,892 - 101,696,125 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14101,653,967 - 101,696,125 (+)EnsemblGRCm38mm10GRCm38
MGSCv3714102,053,184 - 102,095,342 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614100,540,246 - 100,582,053 (+)NCBIMGSCv36mm8
Celera14100,293,249 - 100,335,409 (+)NCBICelera
Cytogenetic Map14E2.3NCBI
cM Map1450.9NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dichloroethane  (EXP)
1H-pyrazole  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
4,4'-sulfonyldiphenol  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
ammonium chloride  (ISO)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
benzatropine  (ISO)
beta-lapachone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium dichloride  (ISO)
cannabidiol  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP)
Cuprizon  (ISO)
cyclosporin A  (ISO)
D-glucose  (ISO)
DDT  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
fenthion  (EXP)
folic acid  (EXP)
fulvestrant  (ISO)
gentamycin  (ISO)
glucose  (ISO)
graphite  (ISO)
inulin  (EXP)
ivermectin  (ISO)
lead(0)  (EXP)
lead(II) chloride  (EXP)
Mesaconitine  (ISO)
methapyrilene  (ISO)
methidathion  (EXP)
methylmercury chloride  (EXP)
microcystin-LR  (ISO)
N-nitrosodiethylamine  (ISO)
ozone  (EXP)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
phlorizin  (EXP)
pirinixic acid  (EXP)
quercetin  (ISO)
rac-lactic acid  (ISO)
sarin  (ISO)
SB 431542  (ISO)
senecionine  (ISO)
Senkirkine  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (EXP,ISO)
temozolomide  (ISO)
thalidomide  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
undecane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA)
cytosol  (ISO)
nucleoplasm  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Loss of Uch-L1 and Uch-L3 leads to neurodegeneration, posterior paralysis and dysphagia. Kurihara LJ, etal., Hum Mol Genet 2001 Sep 1;10(18):1963-70.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Cloning, expression, and mapping of a mouse gene, Uchl4, highly homologous to human and mouse Uchl3. Osawa Y, etal., Biochem Biophys Res Commun 2001 May 11;283(3):627-33.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9790970   PMID:10349636   PMID:10713173   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11829485   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12761045   PMID:14610273  
PMID:14673145   PMID:15466400   PMID:15489334   PMID:15782199   PMID:15884048   PMID:16141072   PMID:16141073   PMID:16508210   PMID:16816367   PMID:17071595   PMID:17967808   PMID:17967898  
PMID:18307031   PMID:18799693   PMID:19671667   PMID:19837878   PMID:20380862   PMID:21052544   PMID:21453705   PMID:21677750   PMID:21678411   PMID:21751213   PMID:21762696   PMID:21873635  
PMID:26609154   PMID:26811477   PMID:28190767   PMID:32290105   PMID:32325033   PMID:35449600   PMID:36278411   PMID:36915132   PMID:37524875   PMID:37740194  


Genomics

Comparative Map Data
Uchl3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914101,891,387 - 101,933,561 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14101,891,403 - 101,933,561 (+)EnsemblGRCm39 Ensembl
GRCm3814101,653,892 - 101,696,125 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14101,653,967 - 101,696,125 (+)EnsemblGRCm38mm10GRCm38
MGSCv3714102,053,184 - 102,095,342 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614100,540,246 - 100,582,053 (+)NCBIMGSCv36mm8
Celera14100,293,249 - 100,335,409 (+)NCBICelera
Cytogenetic Map14E2.3NCBI
cM Map1450.9NCBI
UCHL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381375,549,502 - 75,606,020 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1375,549,483 - 75,606,020 (+)EnsemblGRCh38hg38GRCh38
GRCh371376,123,638 - 76,180,156 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361375,021,928 - 75,078,070 (+)NCBINCBI36Build 36hg18NCBI36
Build 341375,021,927 - 75,078,067NCBI
Celera1357,021,803 - 57,077,943 (+)NCBICelera
Cytogenetic Map13q22.2NCBI
HuRef1356,821,075 - 56,877,308 (+)NCBIHuRef
CHM1_11376,091,356 - 76,147,870 (+)NCBICHM1_1
T2T-CHM13v2.01374,773,163 - 74,829,671 (+)NCBIT2T-CHM13v2.0
Uchl3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81584,888,847 - 84,942,095 (+)NCBIGRCr8
mRatBN7.21578,485,304 - 78,527,355 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3161,856,958 - 161,857,835 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1578,485,315 - 78,527,355 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1582,496,066 - 82,538,090 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01583,572,627 - 83,614,651 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01580,493,216 - 80,535,240 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01586,153,624 - 86,198,127 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1586,153,628 - 86,198,127 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01589,919,728 - 89,964,227 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41585,628,490 - 85,670,420 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1577,676,770 - 77,718,591 (+)NCBICelera
Cytogenetic Map15q21NCBI
Uchl3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540431,414,208 - 31,464,968 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540431,414,076 - 31,465,205 (-)NCBIChiLan1.0ChiLan1.0
UCHL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21477,127,881 - 77,183,967 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11375,725,673 - 75,781,714 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01356,776,436 - 56,832,539 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11375,549,305 - 75,878,805 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1375,549,647 - 75,878,673 (+)Ensemblpanpan1.1panPan2
UCHL3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12229,348,962 - 29,397,944 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2229,348,706 - 29,407,965 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2229,151,524 - 29,258,782 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02229,625,506 - 29,732,716 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2229,684,385 - 29,736,169 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12229,276,538 - 29,383,650 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02229,320,217 - 29,427,245 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02229,388,463 - 29,495,905 (+)NCBIUU_Cfam_GSD_1.0
Uchl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945130,107,193 - 130,163,980 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365115,522,965 - 5,581,334 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365115,524,425 - 5,581,156 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UCHL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1147,828,421 - 47,887,629 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11147,829,037 - 47,885,800 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21152,436,220 - 52,477,054 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UCHL3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl354,647,590 - 54,706,497 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604610,791,194 - 10,849,805 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Uchl3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475124,882,705 - 24,940,105 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475124,882,580 - 24,940,301 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Uchl3
1495 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:16
Count of miRNA genes:16
Interacting mature miRNAs:16
Transcripts:ENSMUST00000002289
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1477073696111073787Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
10054475Ossc3_mosteosarcoma susceptibility 3 (mouse)Not determined1470863768104863926Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined85134068119134068Mouse
1558819Ossc2_mosteosarcoma susceptibility 2 (mouse)Not determined1474394976108395093Mouse
1300551Lprm3_mlymphoproliferation modifier 3 (mouse)Not determined1471221224105221344Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474352296108352384Mouse
14928314Manh77_mmandible shape 77 (mouse)1476767790110767790Mouse
13524530Bodwtq11_mbody wweight QTL 11 (mouse)1487767629102538219Mouse
14747006Mancz12_mmandible centroid size 12 (mouse)1470071977104071977Mouse

Markers in Region
Uchl3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv3714102,065,846 - 102,066,251UniSTSGRCm37
Celera14100,305,913 - 100,306,318UniSTS
Cytogenetic Map14E2.3UniSTS
Cytogenetic Map9CUniSTS
cM Map1448.0UniSTS
Uchl4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38964,235,237 - 64,236,012UniSTSGRCm38
MGSCv37964,083,044 - 64,083,819UniSTSGRCm37
Celera961,460,369 - 61,461,144UniSTS
Cytogenetic Map14E2.3UniSTS
Cytogenetic Map9CUniSTS
cM Map935.0UniSTS
PMC85452P2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3814101,663,837 - 101,664,073UniSTSGRCm38
MGSCv3714102,063,054 - 102,063,290UniSTSGRCm37
Celera14100,303,121 - 100,303,357UniSTS
Cytogenetic Map14E2.3UniSTS
PMC85452P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38964,235,239 - 64,235,958UniSTSGRCm38
MGSCv37964,083,046 - 64,083,765UniSTSGRCm37
Celera961,460,371 - 61,461,090UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14E2.3UniSTS
cM Map935.0UniSTS
cM Map936.0UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001428941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_016723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB033370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF247358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC029242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000002289   ⟹   ENSMUSP00000002289
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14101,891,430 - 101,933,561 (+)Ensembl
GRCm38.p6 Ensembl14101,653,994 - 101,696,125 (+)Ensembl
Ensembl Acc Id: ENSMUST00000226340   ⟹   ENSMUSP00000154032
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14101,903,232 - 101,933,560 (+)Ensembl
GRCm38.p6 Ensembl14101,665,796 - 101,696,124 (+)Ensembl
Ensembl Acc Id: ENSMUST00000226521
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14101,891,452 - 101,891,954 (+)Ensembl
GRCm38.p6 Ensembl14101,654,016 - 101,654,518 (+)Ensembl
Ensembl Acc Id: ENSMUST00000227815
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14101,891,403 - 101,905,258 (+)Ensembl
GRCm38.p6 Ensembl14101,653,967 - 101,667,822 (+)Ensembl
Ensembl Acc Id: ENSMUST00000228773
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14101,891,461 - 101,933,561 (+)Ensembl
GRCm38.p6 Ensembl14101,654,025 - 101,696,125 (+)Ensembl
RefSeq Acc Id: NM_016723   ⟹   NP_057932
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,891,403 - 101,933,561 (+)NCBI
GRCm3814101,653,967 - 101,696,125 (+)NCBI
MGSCv3714102,053,184 - 102,095,342 (+)RGD
Celera14100,293,249 - 100,335,409 (+)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006519246   ⟹   XP_006519309
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,891,387 - 101,933,561 (+)NCBI
GRCm3814101,653,892 - 101,696,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519247   ⟹   XP_006519310
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,891,390 - 101,933,561 (+)NCBI
GRCm3814101,653,969 - 101,696,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519248   ⟹   XP_006519311
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914101,891,390 - 101,933,561 (+)NCBI
GRCm3814101,653,969 - 101,696,125 (+)NCBI
Sequence:
RefSeq Acc Id: NP_057932   ⟸   NM_016723
- UniProtKB: Q9EQX7 (UniProtKB/Swiss-Prot),   Q9JKB1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006519309   ⟸   XM_006519246
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006519310   ⟸   XM_006519247
- Peptide Label: isoform X2
- UniProtKB: A0A2I3BQ39 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006519311   ⟸   XM_006519248
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSMUSP00000002289   ⟸   ENSMUST00000002289
Ensembl Acc Id: ENSMUSP00000154032   ⟸   ENSMUST00000226340
Protein Domains
UCH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JKB1-F1-model_v2 AlphaFold Q9JKB1 1-230 view protein structure

Promoters
RGD ID:8683122
Promoter ID:EPDNEW_M19592
Type:initiation region
Name:Uchl3_1
Description:Mus musculus ubiquitin carboxyl-terminal esterase L3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814101,654,014 - 101,654,074EPDNEW
RGD ID:6825514
Promoter ID:MM_KWN:17653
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung
Transcripts:ENSMUST00000066470,   NM_016723,   UC007UVV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3614102,052,806 - 102,053,517 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1355274 AgrOrtholog
Ensembl Genes ENSMUSG00000022111 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000002289 ENTREZGENE
  ENSMUST00000002289.8 UniProtKB/Swiss-Prot
  ENSMUST00000226340 ENTREZGENE
  ENSMUST00000226340.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.532.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Papain-like_cys_pep_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_C12_UCH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_C12_UCH_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:50933 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1355274 ENTREZGENE
NCBI Gene 50933 ENTREZGENE
PANTHER PTHR10589 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ISOZYME L3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Peptidase_C12 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Uchl3 PhenoGen
PRINTS UBCTHYDRLASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE UCH_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54001 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A2I3BQ39 ENTREZGENE, UniProtKB/TrEMBL
  Q8BWQ9_MOUSE UniProtKB/TrEMBL
  Q9EQX7 ENTREZGENE
  Q9JKB1 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q9EQX7 UniProtKB/Swiss-Prot