Pex11a (peroxisomal biogenesis factor 11 alpha)

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Gene: Pex11a (peroxisomal biogenesis factor 11 alpha) Mus musculus

Analyze

Symbol:

Pex11a

Name:

peroxisomal biogenesis factor 11 alpha

RGD ID:

731523

MGI Page

MGI

Description:

Predicted to enable protein homodimerization activity. Acts upstream of or within brown fat cell differentiation. Predicted to be located in peroxisome. Predicted to be part of protein-containing complex. Predicted to be active in peroxisomal membrane. Orthologous to human PEX11A (peroxisomal biogenesis factor 11 alpha).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

peroxin-11A; peroxisomal biogenesis factor 11a; peroxisomal membrane protein 11A; PEX11; PEX11-alpha; PEX11alpha; protein PEX11 homolog alpha

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PEX11A (peroxisomal biogenesis factor 11 alpha)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, Panther, Treefam
Rattus norvegicus (Norway rat):	Pex11a (peroxisomal biogenesis factor 11 alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pex11a (peroxisomal biogenesis factor 11 alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PEX11A (peroxisomal biogenesis factor 11 alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PEX11A (peroxisomal biogenesis factor 11 alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pex11a (peroxisomal biogenesis factor 11 alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PEX11A (peroxisomal biogenesis factor 11 alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PEX11A (peroxisomal biogenesis factor 11 alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pex11a (peroxisomal biogenesis factor 11 alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Pex11a (peroxisomal biogenesis factor 11 alpha)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PEX11A (peroxisomal biogenesis factor 11 alpha)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pex11a (peroxisomal biogenesis factor 11 alpha)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Saccharomyces cerevisiae (baker's yeast):	PEX11	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Pex11	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pex11a	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	79,385,705 - 79,392,879 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	79,385,705 - 79,392,879 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	79,735,957 - 79,743,131 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	79,735,957 - 79,743,131 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	86,882,150 - 86,887,911 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	79,610,777 - 79,616,538 (-)	NCBI		MGSCv36	mm8
Celera	7	77,136,478 - 77,142,240 (-)	NCBI		Celera
Cytogenetic Map	7	D2	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

Chemical and Drug Induced Liver Injury (ISO)

colorectal cancer (ISO)

D-2-hydroxyglutaric aciduria 2 (ISO)

Dyslipidemias (ISO)

genetic disease (ISO)

obesity (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dichloroethane (EXP)

1-naphthyl isothiocyanate (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (ISO)

3,3',4,4'-tetrachlorobiphenyl (EXP)

3,4-methylenedioxymethamphetamine (EXP)

3-chloropropane-1,2-diol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (EXP)

6-propyl-2-thiouracil (ISO)

aflatoxin B1 (ISO)

amiodarone (EXP)

ammonium chloride (ISO)

aspartame (EXP)

atrazine (ISO)

benzo[a]pyrene (EXP)

beta-naphthoflavone (ISO)

bexarotene (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (ISO)

bromobenzene (ISO)

buspirone (ISO)

buta-1,3-diene (EXP)

carbon nanotube (EXP)

chloroprene (EXP)

ciguatoxin CTX1B (EXP)

ciprofibrate (EXP)

clofibrate (EXP,ISO)

clofibric acid (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (EXP,ISO)

decabromodiphenyl ether (ISO)

dexamethasone (ISO)

dibutyl phthalate (EXP)

dichloroacetic acid (EXP)

dicrotophos (ISO)

dioxygen (EXP)

diuron (ISO)

epoxiconazole (EXP)

ethanol (ISO)

fenofibrate (ISO)

fenvalerate (ISO)

finasteride (ISO)

flavonoids (ISO)

gemfibrozil (ISO)

gentamycin (ISO)

glafenine (ISO)

hexadecanoic acid (EXP)

indole-3-methanol (ISO)

indometacin (ISO)

inulin (EXP)

isotretinoin (ISO)

leflunomide (ISO)

lipopolysaccharide (ISO)

methidathion (EXP)

methotrexate (ISO)

Methylazoxymethanol acetate (ISO)

methylmercury chloride (ISO)

monosodium L-glutamate (EXP)

Muraglitazar (ISO)

N-acetyl-L-cysteine (ISO)

N-nitrosodiethylamine (EXP,ISO)

nefazodone (ISO)

nickel atom (ISO)

nimesulide (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

paricalcitol (ISO)

pentachlorophenol (EXP)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (EXP)

perfluorooctane-1-sulfonic acid (EXP,ISO)

perfluorooctanoic acid (EXP,ISO)

permethrin (EXP)

phenformin (ISO)

phenobarbital (EXP,ISO)

phenylephrine (ISO)

phosphorus atom (ISO)

phosphorus(.) (ISO)

piperonyl butoxide (ISO)

pirinixic acid (EXP,ISO)

pravastatin (EXP,ISO)

propiconazole (EXP)

resveratrol (ISO)

rotenone (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tamoxifen (ISO)

temozolomide (ISO)

Tesaglitazar (ISO)

tetrachloroethene (EXP)

tetrachloromethane (EXP,ISO)

thioacetamide (ISO)

trichloroethene (EXP,ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

valproic acid (EXP,ISO)

zaragozic acid A (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

brown fat cell differentiation (IDA)

peroxisome fission (IBA,ISO)

peroxisome membrane biogenesis (ISO)

peroxisome organization (ISO)

regulation of peroxisome size (ISO)

signal transduction (ISO)

Cellular Component

membrane (IEA)

peroxisomal membrane (IBA,ISO)

peroxisome (ISO)

protein-containing complex (ISO)

Molecular Function

protein binding (ISO)

protein homodimerization activity (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal cell morphology (IAGP)

abnormal cell physiology (IAGP)

abnormal circulating triglyceride level (IAGP)

abnormal embryonic growth/weight/body size (IAGP)

abnormal hepatocyte morphology (IAGP)

hepatic steatosis (IAGP)

increased body weight (IAGP)

increased circulating free fatty acids level (IAGP)

increased circulating ketone body level (IAGP)

increased liver triglyceride level (IAGP)

obese (IAGP)

perinatal lethality (IAGP)

prenatal lethality (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	MGDs mouse GO annotations	MGD data from the GO Consortium
2.	MGD IEA	MGD IEA
3.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9792670	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12417726	PMID:12477932	PMID:15489334	PMID:16141072	PMID:16141073	PMID:16602821
PMID:18492766	PMID:21677750	PMID:21873635	PMID:23169785	PMID:25113963

Genomics

Comparative Map Data

Pex11a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	79,385,705 - 79,392,879 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	79,385,705 - 79,392,879 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	79,735,957 - 79,743,131 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	79,735,957 - 79,743,131 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	86,882,150 - 86,887,911 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	79,610,777 - 79,616,538 (-)	NCBI		MGSCv36	mm8
Celera	7	77,136,478 - 77,142,240 (-)	NCBI		Celera
Cytogenetic Map	7	D2	NCBI

PEX11A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	89,681,535 - 89,690,754 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	15	89,677,764 - 89,690,783 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	90,224,766 - 90,233,985 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	88,027,288 - 88,034,962 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	88,027,292 - 88,034,962	NCBI
Celera	15	66,629,060 - 66,636,731 (-)	NCBI		Celera
Cytogenetic Map	15	q26.1	NCBI
HuRef	15	66,337,719 - 66,346,969 (-)	NCBI		HuRef
CHM1_1	15	90,065,595 - 90,074,847 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	87,437,417 - 87,446,633 (-)	NCBI		T2T-CHM13v2.0

Pex11a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	1	133,680,091 - 133,687,172 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	133,680,091 - 133,687,172 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	141,589,549 - 141,596,507 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	1	148,758,938 - 148,765,910 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	1	141,676,644 - 141,683,616 (-)	NCBI	Rnor_WKY
Rnor_6.0	1	141,474,189 - 141,481,270 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	141,474,180 - 141,481,315 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	142,435,410 - 142,442,491 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	135,513,735 - 135,520,816 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	135,593,304 - 135,685,129 (-)	NCBI
Celera	1	125,743,709 - 125,750,790 (-)	NCBI		Celera
Cytogenetic Map	1	q31	NCBI

Pex11a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	15,527,941 - 15,534,424 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	15,527,925 - 15,537,497 (+)	NCBI	ChiLan1.0	ChiLan1.0

PEX11A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	15	82,936,655 - 82,945,276 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	68,375,201 - 68,384,440 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	87,581,581 - 87,590,684 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	87,581,564 - 87,590,684 (-)	Ensembl	panpan1.1		panPan2

PEX11A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	52,674,363 - 52,684,776 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	52,674,348 - 52,684,660 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	55,308,322 - 55,318,739 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	53,090,753 - 53,101,172 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	53,090,755 - 53,101,151 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	52,612,919 - 52,623,332 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	52,824,121 - 52,833,237 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	53,163,246 - 53,173,666 (-)	NCBI		UU_Cfam_GSD_1.0

Pex11a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	130,853,950 - 130,861,573 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936483	15,472,949 - 15,480,648 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936483	15,474,484 - 15,480,527 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PEX11A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	55,256,220 - 55,264,247 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	55,256,239 - 55,264,253 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	60,145,337 - 60,153,336 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PEX11A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	29	8,220,082 - 8,229,448 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	29	8,221,920 - 8,229,243 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	38,584,059 - 38,593,190 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pex11a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624768	16,751,366 - 16,760,326 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624768	16,751,366 - 16,759,829 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Pex11a
246 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	799
Count of miRNA genes:	509
Interacting mature miRNAs:	607
Transcripts:	ENSMUST00000032761, ENSMUST00000139620, ENSMUST00000150606
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300722	Sle3_m	systemic lupus erythmatosus susceptibility 3 (mouse)			Not determined		7	3511728	87142720	Mouse
25314307	Mlh1fc2_m	MLH1 foci count 2 (mouse)					7	6502999	133501729	Mouse
12792978	Fbmd3_m	femoral bone mineral density 3, females only (mouse)					7	7050288	142367832	Mouse
10412199	Sst2_m	susceptibility to tuberculosis 2 (mouse)			Not determined		7	18728794	119485380	Mouse
1301158	Eae4_m	susceptibility to experimental allergic encephalomyelitis 4 (mouse)			Not determined		7	19147398	141919804	Mouse
4141805	Sle19_m	systematic lupus erythematosus susceptibility 19 (mouse)			Not determined			30032485	81135653	Mouse
26884404	Huml1_m	humerus length 1, 5 week (mouse)					7	30199425	108999207	Mouse
1301514	Rigs1_m	radiation induced gastroschisis 1 (mouse)			Not determined		7	36280015	92394346	Mouse
1301082	Bbaa16_m	B.burgdorferi-associated arthritis 16 (mouse)			Not determined		7	36280015	116416877	Mouse
25314303	Vmm4_m	variable multisystem mineralization 4, kidney (mouse)					7	37299425	87049208	Mouse
1300791	Abbp3_m	A/J and C57BL/6 blood pressure 3 (mouse)			Not determined		7	39673887	103510010	Mouse
10043926	Bw1n_m	body weight 1 in NSY (mouse)			Not determined		7	45161966	118693530	Mouse
1302141	Fcsa6_m	femoral cross-sectional area 6 (mouse)			Not determined		7	48384461	82384607	Mouse
11532741	Tbrs5_m	tuberculosis resistance 5 (mouse)					7	49159227	83235415	Mouse
1357752	Tabw_m	tally ho asscoiated body weight (mouse)			Not determined		7	49193278	83193390	Mouse
10053685	Eae43_m	experimental allergic encephalomyelitis susceptibility 43 (mouse)			Not determined		7	51124954	85125093	Mouse
10054064	Bwq11_m	body weight QTL 11 (mouse)			Not determined		7	51124954	85125093	Mouse
13208555	Lgth10_m	body length 10 (mouse)					7	51649748	125599172	Mouse
12880418	V125Dq6_m	vitamin D active form serum level QTL 6 (mouse)					7	52149748	86149748	Mouse
27226751	Femd5_m	femur midshaft diameter 5, 10 week (mouse)					7	53249748	143153737	Mouse
25823170	Hrsq7_m	host response to SARS QTL 7, log titer (mouse)					7	54819589	116822815	Mouse
11565101	Tsve1_m	variable short tail (Tsv) enhancer 1 (mouse)					7	55889508	87142720	Mouse
27226778	Femd11_m	femur midshaft diameter 11, 16 week (mouse)					7	56949748	134001729	Mouse
1300952	Hcs1_m	hepatocarcinogenesis susceptibility 1 (mouse)			Not determined		7	57326121	91326352	Mouse
1301465	Egrm3_m	early growth rate (mouse)			Not determined		7	57326121	91326352	Mouse
1301663	Skull9_m	skull morphology 9 (mouse)			Not determined		7	57326121	91326352	Mouse
26884408	Bzwq13_m	bi-zygomatic width QTL 13, 16 week (mouse)					7	61749748	121399223	Mouse
27095916	Scvln15_m	sacral vertebrae length 2, 16 week (mouse)					7	61749748	123699223	Mouse
25314305	Vmm6_m	variable multisystem mineralization 6, eye (mouse)					7	61849748	102749207	Mouse
1301383	Aem2_m	anti-erythrocyte autoantibody modifier 2 (mouse)			Not determined		7	64135424	98135653	Mouse
26884381	Bzwq2_m	bi-zygomatic width QTL 2, 5 week (mouse)					7	65249748	96949207	Mouse
26884440	Sklq4_m	skull length QTL 4, 5 week (mouse)					7	65249748	126499172	Mouse
11553865	Stmm1c_m	skin tumor modifier of MSM 1c (mouse)					7	65788986	99788986	Mouse
11553866	Stmm1d_m	skin tumor modifier of MSM 1d (mouse)					7	65788986	99788986	Mouse
27095937	Ulnl7_m	ulna length 7, 10 week (mouse)					7	66449748	98349207	Mouse
12801463	Rta1_m	retinal aging 1 (mouse)					7	67168027	89089989	Mouse
1301826	Pgia3_m	proteoglycan induced arthritis 3 (mouse)			Not determined		7	67290094	101290240	Mouse
1301784	Ses2_m	salmonella enteritidis susceptibility 2 (mouse)			Not determined		7	67290094	101290240	Mouse
1300620	Pgia21_m	proteoglycan induced arthritis 21 (mouse)			Not determined		7	67290094	101290240	Mouse
26884418	Bzwq7_m	bi-zygomatic width QTL 7, 10 week (mouse)					7	67849748	105449207	Mouse
27226715	Metcl3_m	metatarsal-calcaneal length 3, 5 week (mouse)					7	67849748	119499223	Mouse
26884444	Sklq8_m	skull length QTL 8, 10 week (mouse)					7	67849748	124199223	Mouse
26884451	Sklq14_m	skull length QTL 14, 16 week (mouse)					7	67849748	124999172	Mouse
1300654	Bomd1_m	bone mineral density 1 (mouse)			Not determined		7	68365595	102365702	Mouse
27095907	Scvln4_m	sacral vertebrae length 2, 5 week (mouse)					7	69949748	120499223	Mouse
1301155	Bpq7_m	blood pressure QTL 7 (mouse)			Not determined		7	70143137	104143379	Mouse
10043973	Obq29_m	obesity QTL 29 (mouse)			Not determined		7	72263372	106263372	Mouse
4142319	Powg_m	post-ovarectomy weight gain (mouse)			Not determined			72857105	92582163	Mouse
27095910	Pglq13_m	pelvic girdle length QTL 13, 16 week (mouse)					7	73049748	125699172	Mouse
27095933	Ulnl3_m	ulna length 3, 5 week (mouse)					7	73149748	143153737	Mouse
11553869	Stmm2b_m	skin tumor modifier of MSM 2a (mouse)					7	73725965	107725965	Mouse
4142212	Png1_m	Postnatal growth 1 (mouse)			Not determined			74326121	92394346	Mouse
27226745	Metcl9_m	metatarsal-calcaneal length 9, 10 week (mouse)					7	74849748	122199223	Mouse
27226781	Tibl3_m	tibia length 3, 5 week (mouse)					7	74849748	122199223	Mouse
1301566	Adip3_m	adiposity 3 (mouse)			Not determined		7	75394215	109394346	Mouse
14746989	Manh62_m	mandible shape 62 (mouse)					7	75742528	109742528	Mouse
26884398	Humsd6_m	humerus midshaft diameter 6, 16 week (mouse)					7	78649748	136901729	Mouse

Markers in Region

PMC134051P1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	7	79,737,034 - 79,737,589	UniSTS	GRCm38
MGSCv37	7	86,881,920 - 86,882,475	UniSTS	GRCm37
Celera	7	77,136,248 - 77,136,803	UniSTS
Cytogenetic Map	7	D2	UniSTS

PMC321432P4

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	7	79,738,588 - 79,738,806	UniSTS	GRCm38
MGSCv37	7	86,883,474 - 86,883,692	UniSTS	GRCm37
Celera	7	77,137,802 - 77,138,020	UniSTS
Cytogenetic Map	7	D2	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_011068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_153403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036152777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC158582	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF093669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK076776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK078954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK149387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC023439	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC028786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000032761 ⟹ ENSMUSP00000032761

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	79,385,705 - 79,392,828 (-)	Ensembl
GRCm38.p6 Ensembl	7	79,735,957 - 79,743,080 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000139620

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	79,387,520 - 79,390,104 (-)	Ensembl
GRCm38.p6 Ensembl	7	79,737,772 - 79,740,356 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000150606

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	79,386,837 - 79,392,879 (-)	Ensembl
GRCm38.p6 Ensembl	7	79,737,089 - 79,743,131 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000205297

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	79,386,998 - 79,388,472 (-)	Ensembl
GRCm38.p6 Ensembl	7	79,737,250 - 79,738,724 (-)	Ensembl

RefSeq Acc Id:

NM_011068 ⟹ NP_035198

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	79,385,706 - 79,392,879 (-)	NCBI
GRCm38	7	79,735,958 - 79,743,131 (-)	NCBI
MGSCv37	7	86,882,150 - 86,887,911 (-)	RGD
Celera	7	77,136,478 - 77,142,240 (-)	RGD
cM Map	7		ENTREZGENE

Sequence:

show sequence

GAACTCCAAAAGCCGCGTTTCCGAAGGTGTGCCCACCCCCGTGTGGGCGGAGAGACGAAGTCCC
ACCCACCTGGCAACTAATCTGTTCCCGCTGTCCCCCGGGACCGGCGACGTCCCAGGGGACCCAC
GAGGGAGCGGGCGCAACGCGTGGCTGTGGGTGGGAGCCATGGACGCCTTCATCCGAGTCGCCAA
CCAAAGCCAGGGCCGGGACCGACTTTTCAGAGCCACTCAGCACGCATGCATGTTGCTTAGATAT
TTGTTAGAGTCTAAAGCTGACAAAGAGGCCGTGGTACTGAAGCTCAAGAGGCTGGAGACCAGTG
TGAGCACTGGCCGTAAATGGTTCAGACTGGGCAACGTGTTCCATGCCATCCAGGCAACTGAGCA
GAGCATCCAAGCCGCTGACCTCGCGCCCCGCTTATGCCTGACATTAGCCAACCTCAACCGCGTG
GTTTATTACATCTGTGACACTGTCCTCTGGGCGAAGAGTGTGGGTCTTACCTCTGGAGTCAACA
GAGAGAAATGGCAAAGGTGGGCGGCTCGCCATTACTACTACTTCCTCTTGCTGAGCCTGGTCCG
GGATCTGTATGAGATCTTGCTGCAGATGGGACAAGTTGCACGTGACAGAGCAAAGAGAGAGAAA
TCCTCTCGGGACCCTCCTAAGTACAGCGTGGCTAATGAAGAGACTGAATGGCTCCAGTCCTTCC
TCCTCCTCCTATTCCAGTCTCTAAAGCGACATCCTCCCTTGCTCCTGGACACCGTGAAGAACTT
CTGTGACATCCTGATCCCTCTGAACCAGCTTGGGATCTACAAGTCCAATCTCGGCGTGGTAGGA
CTTGGAGGTCTCATATCCTCTTTGGCTGGTCTCCTCACGGTAGTGTATCCTCAGCTGAAACTGA
AGGCCCGCTAGGGTGTTTGGAGGCTTTAAGGCTAGCAGTTCAGTGGAACAAACATTTGGTTTTG
TCCCAATGTTTACTGTGCTTAATTTAAAAAAAAAAAAAAAATCATGTGAGCACCTTACCATCCT
ATGAGCAGAGGTAGGACCAGCAGTGGCGCATGCTACAGTAACTTCATTTCTGTTCAGGTAACAT
TACTGAGCATCTTTTATGTACATAGTAAGAGCCTAGTGTTGCTGGACAAATAAAGATGAAAAGG
AGAGAAACCATGAAAGACCCAAAGAAACTAGAATTACAGATCAGGTTGCACAGGTCCCTGATTC
CACACAAGCACACCAGGGCTGAAGCACAGCACTCCCAGCTCTGCTTAAGTTTTCCCTTTTCTCC
CATCTGTTATTATCCCCCACTCCCACGGGTGTCAGGAGTGAGATGGAGGGGAGCTGGGCTCAGC
GCCTGTTAACCTGCTGGTCCCGGTCATTGCTGCAGTCGTGTCCTGACCATGTCCAGTAGCCTCA
GAAGAACATCAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTCTCGGTAATGCTA
GGAGCAAGCAAGAGCCACAGAAGGGACCAGAGGTGAAAGCAGGTGGGAGGTCACCGCGGCCTGT
TATGTCATCCGTCACAGATAAGGACTATGACAGTACAAAACAAAGCTGATAGCACAGATTCATT
GGGAGACTTTCCAGGATGATCCGCGTGATCTCGTTACCTTCAGCGGTCTTCCCGGGCTCAGAGC
CCTTAGCCCCTTAACATGCCCCCGAGTCCTGGAGCTTCAGTTGATGGTTTCTGTCCCAGTCTAT
GAAATGCAAAGCAATCTAGACTCACCCAGGTTGGTTTGATTTAGCTACATAACAGTTTATGCAA
TTCCACAGTAATTTTTATCAAAATAAGAGAATTAAATTTTTTCTGTCTATAGATGTAGGAACGT
CAGTTTTCTGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAAAGAGCAATAGGG
CCAGTGGAGGGGTCGTGGGGACACCGGGTCAGTGCATTTGCCCGTGTTCACACTTCACGGTTCA
GTCTTCCTGTCTTGAGTTTGGTTGGTTTAGGTGTGTGGTGTGGGAGACACTGGCCAGCAGGCGG
GTCATGTCTACTAAGTGGAAATGAGAACTATGCACTAAGCAATTGTTTCCCATAAATGTGAAGG
TGATTCTTGAAAAGTGGACTCAGGCCCTTGGCATTCTCTACTTTTAAAATGATAATGTGCTTTG
AGAAGACTTTGGGGGCGGGGGTTGAGATTAAAGTGGCTAAAACAAGACAAATACCAGCAAATGC
CTATTTGCACTGTAACTTTAATTATGTCTAATAAATTTCTAGATAAAATTG

hide sequence

RefSeq Acc Id:

NR_153403

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	79,385,706 - 79,392,879 (-)	NCBI
GRCm38	7	79,735,958 - 79,743,131 (-)	NCBI

Sequence:

show sequence

GAACTCCAAAAGCCGCGTTTCCGAAGGTGTGCCCACCCCCGTGTGGGCGGAGAGACGAAGTCCC
ACCCACCTGGCAACTAATCTGTTCCCGCTGTCCCCCGGGACCGGCGACGTCCCAGGGGACCCAC
GAGGGAGCGGGCGCAACGCGTGGCTGTGGGTGGGAGCCATGGACGCCTTCATCCGAGTCGCCAA
CCAAAGCCAGGGCCGGGACCGACTTTTCAGGGTTCAGACTGGGCAACGTGTTCCATGCCATCCA
GGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCCCGCTTATGCCTGACATTAGCCAAC
CTCAACCGCGTGGTTTATTACATCTGTGACACTGTCCTCTGGGCGAAGAGTGTGGGTCTTACCT
CTGGAGTCAACAGAGAGAAATGGCAAAGGTGGGCGGCTCGCCATTACTACTACTTCCTCTTGCT
GAGCCTGGTCCGGGATCTGTATGAGATCTTGCTGCAGATGGGACAAGTTGCACGTGACAGAGCA
AAGAGAGAGAAATCCTCTCGGGACCCTCCTAAGTACAGCGTGGCTAATGAAGAGACTGAATGGC
TCCAGTCCTTCCTCCTCCTCCTATTCCAGTCTCTAAAGCGACATCCTCCCTTGCTCCTGGACAC
CGTGAAGAACTTCTGTGACATCCTGATCCCTCTGAACCAGCTTGGGATCTACAAGTCCAATCTC
GGCGTGGTAGGACTTGGAGGTCTCATATCCTCTTTGGCTGGTCTCCTCACGGTAGTGTATCCTC
AGCTGAAACTGAAGGCCCGCTAGGGTGTTTGGAGGCTTTAAGGCTAGCAGTTCAGTGGAACAAA
CATTTGGTTTTGTCCCAATGTTTACTGTGCTTAATTTAAAAAAAAAAAAAAAATCATGTGAGCA
CCTTACCATCCTATGAGCAGAGGTAGGACCAGCAGTGGCGCATGCTACAGTAACTTCATTTCTG
TTCAGGTAACATTACTGAGCATCTTTTATGTACATAGTAAGAGCCTAGTGTTGCTGGACAAATA
AAGATGAAAAGGAGAGAAACCATGAAAGACCCAAAGAAACTAGAATTACAGATCAGGTTGCACA
GGTCCCTGATTCCACACAAGCACACCAGGGCTGAAGCACAGCACTCCCAGCTCTGCTTAAGTTT
TCCCTTTTCTCCCATCTGTTATTATCCCCCACTCCCACGGGTGTCAGGAGTGAGATGGAGGGGA
GCTGGGCTCAGCGCCTGTTAACCTGCTGGTCCCGGTCATTGCTGCAGTCGTGTCCTGACCATGT
CCAGTAGCCTCAGAAGAACATCAGTGCCTCTGGGGCGGAGGCTGTGTCCACAGGTAGAAGGCTC
TCGGTAATGCTAGGAGCAAGCAAGAGCCACAGAAGGGACCAGAGGTGAAAGCAGGTGGGAGGTC
ACCGCGGCCTGTTATGTCATCCGTCACAGATAAGGACTATGACAGTACAAAACAAAGCTGATAG
CACAGATTCATTGGGAGACTTTCCAGGATGATCCGCGTGATCTCGTTACCTTCAGCGGTCTTCC
CGGGCTCAGAGCCCTTAGCCCCTTAACATGCCCCCGAGTCCTGGAGCTTCAGTTGATGGTTTCT
GTCCCAGTCTATGAAATGCAAAGCAATCTAGACTCACCCAGGTTGGTTTGATTTAGCTACATAA
CAGTTTATGCAATTCCACAGTAATTTTTATCAAAATAAGAGAATTAAATTTTTTCTGTCTATAG
ATGTAGGAACGTCAGTTTTCTGTGACAAATCTGGTTTTCTCAGGACAACTGAGAGGGACAGGAA
AGAGCAATAGGGCCAGTGGAGGGGTCGTGGGGACACCGGGTCAGTGCATTTGCCCGTGTTCACA
CTTCACGGTTCAGTCTTCCTGTCTTGAGTTTGGTTGGTTTAGGTGTGTGGTGTGGGAGACACTG
GCCAGCAGGCGGGTCATGTCTACTAAGTGGAAATGAGAACTATGCACTAAGCAATTGTTTCCCA
TAAATGTGAAGGTGATTCTTGAAAAGTGGACTCAGGCCCTTGGCATTCTCTACTTTTAAAATGA
TAATGTGCTTTGAGAAGACTTTGGGGGCGGGGGTTGAGATTAAAGTGGCTAAAACAAGACAAAT
ACCAGCAAATGCCTATTTGCACTGTAACTTTAATTATGTCTAATAAATTTCTAGATAAAATTG

hide sequence

RefSeq Acc Id:

XM_036152777 ⟹ XP_036008670

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	79,385,705 - 79,392,729 (-)	NCBI

Sequence:

show sequence

GCTGTGGGTGGGAGCCATGGACGCCTTCATCCGAGTCGCCAACCAAAGCCAGGGCCGGGACCGA
CTTTTCAGGAAATCTGAAGATCATCCTATGTAGGGGCACATAGCAGATGTGAAGAGCCACTCAG
CACGCATGCATGTTGCTTAGATATTTGTTAGAGTCTAAAGCTGACAAAGAGGCCGTGGTACTGA
AGCTCAAGAGGCTGGAGACCAGTGTGAGCACTGGCCGTAAATGGTTCAGACTGGGCAACGTGTT
CCATGCCATCCAGGCAACTGAGCAGAGCATCCAAGCCGCTGACCTCGCGCCCCGCTTATGCCTG
ACATTAGCCAACCTCAACCGCGTGGTTTATTACATCTGTGACACTGTCCTCTGGGCGAAGAGTG
TGGGTCTTACCTCTGGAGTCAACAGAGAGAAATGGCAAAGGTGGGCGGCTCGCCATTACTACTA
CTTCCTCTTGCTGAGCCTGGTCCGGGATCTGTATGAGATCTTGCTGCAGATGGGACAAGTTGCA
CGTGACAGAGCAAAGAGAGAGAAATCCTCTCGGGACCCTCCTAAGTACAGCGTGGCTAATGAAG
AGACTGAATGGCTCCAGTCCTTCCTCCTCCTCCTATTCCAGTCTCTAAAGCGACATCCTCCCTT
GCTCCTGGACACCGTGAAGAACTTCTGTGACATCCTGATCCCTCTGAACCAGCTTGGGATCTAC
AAGTCCAATCTCGGCGTGGTAGGACTTGGAGGTCTCATATCCTCTTTGGCTGGTCTCCTCACGG
TAGTGTATCCTCAGCTGAAACTGAAGGCCCGCTAGGGTGTTTGGAGGCTTTAAGGCTAGCAGTT
CAGTGGAACAAACATTTGGTTTTGTCCCAATGTTTACTGTGCTTAATTTAAAAAAAAAAAAAAA
ATCATGTGAGCACCTTACCATCCTATGAGCAGAGGTAGGACCAGCAGTGGCGCATGCTACAGTA
ACTTCATTTCTGTTCAGGTAACATTACTGAGCATCTTTTATGTACATAGTAAGAGCCTAGTGTT
GCTGGACAAATAAAGATGAAAAGGAGAGAAACCATGAAAGACCCAAAGAAACTAGAATTACAGA
TCAGGTTGCACAGGTCCCTGATTCCACACAAGCACACCAGGGCTGAAGCACAGCACTCCCAGCT
CTGCTTAAGTTTTCCCTTTTCTCCCATCTGTTATTATCCCCCACTCCCACGGGTGTCAGGAGTG
AGATGGAGGGGAGCTGGGCTCAGCGCCTGTTAACCTGCTGGTCCCGGTCATTGCTGCAGTCGTG
TCCTGACCATGTCCAGTAGCCTCAGAAGAACATCAGTGCCTCTGGGGCGGAGGCTGTGTCCACA
GGTAGAAGGCTCTCGGTAATGCTAGGAGCAAGCAAGAGCCACAGAAGGGACCAGAGGTGAAAGC
AGGTGGGAGGTCACCGCGGCCTGTTATGTCATCCGTCACAGATAAGGACTATGACAGTACAAAA
CAAAGCTGATAGCACAGATTCATTGGGAGACTTTCCAGGATGATCCGCGTGATCTCGTTACCTT
CAGCGGTCTTCCCGGGCTCAGAGCCCTTAGCCCCTTAACATGCCCCCGAGTCCTGGAGCTTCAG
TTGATGGTTTCTGTCCCAGTCTATGAAATGCAAAGCAATCTAGACTCACCCAGGTTGGTTTGAT
TTAGCTACATAACAGTTTATGCAATTCCACAGTAATTTTTATCAAAATAAGAGAATTAAATTTT
TTCTGTCTATAGATGTAGGAACGTCAGTTTTCTGTGACAAATCTGGTTTTCTCAGGACAACTGA
GAGGGACAGGAAAGAGCAATAGGGCCAGTGGAGGGGTCGTGGGGACACCGGGTCAGTGCATTTG
CCCGTGTTCACACTTCACGGTTCAGTCTTCCTGTCTTGAGTTTGGTTGGTTTAGGTGTGTGGTG
TGGGAGACACTGGCCAGCAGGCGGGTCATGTCTACTAAGTGGAAATGAGAACTATGCACTAAGC
AATTGTTTCCCATAAATGTGAAGGTGATTCTTGAAAAGTGGACTCAGGCCCTTGGCATTCTCTA
CTTTTAAAATGATAATGTGCTTTGAGAAGACTTTGGGGGCGGGGGTTGAGATTAAAGTGGCTAA
AACAAGACAAATACCAGCAAATGCCTATTTGCACTGTAACTTTAATTATGTCTAATAAATTTCT
AGATAAAATTGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_035198	(Get FASTA)	NCBI Sequence Viewer
	XP_036008670	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC78659	(Get FASTA)	NCBI Sequence Viewer
	AAH23439	(Get FASTA)	NCBI Sequence Viewer
	BAC37477	(Get FASTA)	NCBI Sequence Viewer
	BAE28847	(Get FASTA)	NCBI Sequence Viewer
	EDL07048	(Get FASTA)	NCBI Sequence Viewer
	EDL07049	(Get FASTA)	NCBI Sequence Viewer
	Q9Z211	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_035198 ⟸ NM_011068

- UniProtKB:

Q8C5B8 (UniProtKB/Swiss-Prot), Q9Z211 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MDAFIRVANQSQGRDRLFRATQHACMLLRYLLESKADKEAVVLKLKRLETSVSTGRKWFRLGNV
FHAIQATEQSIQAADLAPRLCLTLANLNRVVYYICDTVLWAKSVGLTSGVNREKWQRWAARHYY
YFLLLSLVRDLYEILLQMGQVARDRAKREKSSRDPPKYSVANEETEWLQSFLLLLFQSLKRHPP
LLLDTVKNFCDILIPLNQLGIYKSNLGVVGLGGLISSLAGLLTVVYPQLKLKAR

hide sequence

RefSeq Acc Id:

ENSMUSP00000032761 ⟸ ENSMUST00000032761

RefSeq Acc Id:	XP_036008670 ⟸ XM_036152777
- Peptide Label:	isoform X1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9Z211-F1-model_v2	AlphaFold	Q9Z211	1-246	view protein structure

Promoters

RGD ID:

8664521

Promoter ID:

EPDNEW_M10292

Type:

initiation region

Name:

Pex11a_1

Description:

Mus musculus peroxisomal biogenesis factor 11 alpha , transcriptvariant 2, non-coding RNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	7	79,743,052 - 79,743,112	EPDNEW

RGD ID:

6841732

Promoter ID:

MM_KWN:51253

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day3

Transcripts:

OTTMUST00000061472

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	7	86,884,966 - 86,885,466 (-)	MPROMDB

RGD ID:

6841735

Promoter ID:

MM_KWN:51254

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung

Transcripts:

ENSMUST00000098352, NM_001037927, OTTMUST00000061470, OTTMUST00000061471

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	7	86,886,796 - 86,888,192 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1338788	AgrOrtholog
Ensembl Genes	ENSMUSG00000030545	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein	ENSMUSP00000032761	ENTREZGENE
	ENSMUSP00000032761.8	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000032761	ENTREZGENE
	ENSMUST00000032761.8	UniProtKB/Swiss-Prot
InterPro	PEX11	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:18631	UniProtKB/Swiss-Prot
MGD	MGI:1338788	ENTREZGENE
NCBI Gene	18631	ENTREZGENE
PANTHER	PEROXISOMAL BIOGENESIS FACTOR 11	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PEROXISOMAL MEMBRANE PROTEIN 11A	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	PEX11	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Pex11a	PhenoGen
UniProt	PX11A_MOUSE	UniProtKB/Swiss-Prot
	Q3UER4_MOUSE	UniProtKB/TrEMBL
	Q8C5B8	ENTREZGENE
	Q9Z211	ENTREZGENE
UniProt Secondary	Q8C5B8	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

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